Commit graph

50 commits

Author SHA1 Message Date
Lucas Merrill Brown
5706837956
Add NATA cancer risk and respiratory hazard to definition L (#1001) 2021-12-07 12:45:45 -05:00
Lucas Merrill Brown
5a6d6d8557
Issue 954: Add various data sources from Child Opportunity Index (#986)
* Adds four fields:
    * Summer days above 90F
    * Percent low access to healthy food
    * Percent impenetrable surface areas
    * Low third grade reading proficiency

* Each of these four gets added into Definition L in various factors.

* Additionally, I add college attendance fields to the ETL for Census ACS.

* This PR also introduces the notion of "reverse percentiles", relevant to ticket #970.
2021-12-07 11:33:49 -05:00
Saran Ahluwalia
07ee4165b4
New Create indicators for all thresholds exceeded by a community in Definition L (#980)
* added fieldnames

* todo pollution, water, health & workforce

* workforce

* work in progress

* add utility function to replace duplicate summation logic

* move fpl series into add columns - run black .

* added revisions - still a wip

* added fieldnames

* todo pollution, water, health & workforce

* workforce

* work in progress

* add utility function to replace duplicate summation logic

* move fpl series into add columns - run black .

* added revisions - still a wip

* revise workforce and water

* revise housing and add incremental counter for workforce

* last PR nit

* revise workforce

* more PR feedback in score l

* more PR feedback in score l

* more PR feedback in score l

* addd FPL_SERIES and update references in score 1

* fix bugs

* reparameterize function

* final revisions in fieldnames

* make computations all consistent so we assing with FPL_200_SERIES

* fieldnames refactor after clarification and PR review

* finalize

* finalize with no typos

* fix length

* added median income var

* swap thresholds

* remove iteration

* remove stray '

* address flake 8

* added f string formatting and fixed typos

* added f string formatting and fixed typos

* move up

* remove dupes

* reformat

* fix bugs

* fix bugs

* initialize

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-05 19:51:19 -05:00
Lucas Merrill Brown
d705a8244c
adding demographics information to ETL source data (#982) 2021-12-05 17:56:45 -05:00
Saran Ahluwalia
610343a1e3
DoE fix to address #975 (#979)
* Fixed input field name

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-05 08:26:39 -05:00
Saran Ahluwalia
19efdfeb4a
DoE LEAD References Need to be Updated (#976)
* replace temporary fieldnames that are not found and indexed

* fixed field names

* PR review

* PR review - revert

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-04 12:38:50 -05:00
Lucas Merrill Brown
c5dff6e5f7
Issue 242: Add HOLC Grades to data inputs (#978)
* Add mapping inequality data to data inputs

* Add mapping inequality data to comparison tool
2021-12-04 12:23:01 -05:00
Lucas Merrill Brown
1d101c93d2
Issue 844: Add island areas to Definition L (#957)
This ended up being a pretty large task. Here's what this PR does:

1. Pulls in Vincent's data from island areas into the score ETL. This is from the 2010 decennial census, the last census of any kind in the island areas.
2. Grabs a few new fields from 2010 island areas decennial census.
3. Calculates area median income for island areas.
4. Stops using EJSCREEN as the source of our high school education data and directly pulls that from census (this was related to this project so I went ahead and fixed it).
5. Grabs a bunch of data from the 2010 ACS in the states/Puerto Rico/DC, so that we can create percentiles comparing apples-to-apples (ish) from 2010 island areas decennial census data to 2010 ACS data. This required creating a new class because all the ACS fields are different between 2010 and 2019, so it wasn't as simple as looping over a year parameter.
6. Creates a combined population field of island areas and mainland so we can use those stats in our comparison tool, and updates the comparison tool accordingly.
2021-12-03 15:46:10 -05:00
Saran Ahluwalia
8cb9d197df
updated doe enerygy link and changed fieldnames - removed computation step as BURDEN is already ratio (#963)
Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-03 13:33:19 -05:00
Saran Ahluwalia
fdba1eb171
Revisions to FEMA measure and new link for FEMA data (#952)
* per tract collect all diaster total annual expected loss - numerator

* add updated numerators

* EALP columns are missing on tox check - this will ensure only EALP columns that exist are subet on

* EALB columns are missing on tox check - this will ensure only EALP columns that exist are subet on

* reverted to incorporate megatracts

* updated unit tests

* fix tests

* add transform

* remove print statement

* input reflects input from FEMA risks for tracts

* revise tests and update fixtures - clean up tests and main transform function

* added more records

* remove references to Blocks in keyword args in tests

* linting

* addressed latest PR feedback

* remove imports and update arguments to be compatible for 1.1.0

* remove block reference in test

* change precision to 10 digits - refactor tests to accomdate this

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-03 12:42:07 -05:00
Vincent La
84874ee4a5
[ISS-751] Updating comments for geocorr ETL (#913) 2021-12-03 10:10:05 -05:00
Lucas Merrill Brown
5c65eed28f
Issue 838: Update comparison tool to use tracts (#934)
* Updating comparison tool to use tracts, and rely more heavily on `field_names`
2021-11-30 18:46:29 -05:00
Lucas Merrill Brown
d2352c6217 Fix too many tracts in join error in ACS (#933) 2021-11-30 13:49:21 -05:00
Lucas Merrill Brown
a4108d24c0 Issue 919: Fix too many tracts issue (#922)
* Some cleanup, adding error warning to merge function

* Error handling around tract merge
2021-11-30 13:49:20 -05:00
Jorge Escobar
16eb29e429 EJScreen Tracts (#918)
* EJScreen Tracts

* EJScreen Tracts
2021-11-30 13:49:20 -05:00
Jorge Escobar
f915e20e91 Esfoobar usds/835 census tracts geojson (#916)
* Census Tracts instead of CBGs

* typo
2021-11-30 13:49:20 -05:00
Shelby Switzer
617f41526f Update Census AMI to ETL into tracts, not CBGs (#900)
* Update Census AMI to ETL into tracts, not CBGs

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-11-30 13:49:20 -05:00
Lucas Merrill Brown
537844236a Update FEMA data to be tracts, not block groups (#906) 2021-11-30 13:49:20 -05:00
Shelby Switzer
893758f1d4 Use tract instead of block group when calling census API (#901)
* Use tract instead of block group when calling census API

* fixing merge conflicts

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-11-30 13:49:20 -05:00
Shelby Switzer
0c8b32e679 Move Housing and Transportation Index to tracts (#903)
Update data download URL to use tract as focus, use tract field name,
and move this dataset to the tracts df list in etl_score.

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-11-30 13:49:20 -05:00
Lucas Merrill Brown
776a52595f Switching island territories data to tracts (#879) 2021-11-30 13:49:20 -05:00
Lucas Merrill Brown
474d010bf4
Quick fix on island territories directory name (#877) 2021-11-16 14:31:11 -05:00
Jorge Escobar
0a21fc6b12
Add territory boundary data (#885)
* Add territory boundary data

* housing and transp

* lint

* lint

* lint
2021-11-16 10:05:09 -05:00
Lucas Merrill Brown
21834b4a91
Issue 883: Update FEMA risk index measure (#884)
* ETL updated

* Adding three fields to score
2021-11-13 11:32:15 -05:00
Lucas Merrill Brown
05ebf9b48c
Add median house value to Definition L (#882)
* Added house value to ETL

* Adding house value to score formula and comp tool
2021-11-13 10:29:23 -05:00
Vincent La
b0dbc90064
[ISS-723] Load Census Data for 4 Territories (#816)
* Adding census decennial data for island territories
2021-11-09 16:32:46 -05:00
Jorge Escobar
053dde0d40
Display score L on map (#849)
* updates to first docker run

* tile constants

* frontend changes

* updating pickles instructions

* pickles
2021-11-05 16:26:14 -04:00
Lucas Merrill Brown
03e59f2abd
Definition L updates (#862)
* Changing FEMA risk measure 

* Adding "basic stats" feature to comparison tool 

* Tweaking Definition L
2021-11-05 15:43:52 -04:00
Lucas Merrill Brown
1d541be447
Add EJSCREEN Areas of Concern (#843)
* Adding ej screen areas of concern

* Uses it where user has local files, but not otherwise

Co-authored-by: VincentLaUSDS <vincent.la@omb.eop.gov>
2021-11-02 15:38:42 -04:00
Jorge Escobar
1b17af84c8
Combine + Tilefy (#806)
* init

* score-post

* added score csv s3 download; remore poetry cmds from readme

* working census tile fetch

* PR review

* Github Actions Work
2021-11-01 18:05:05 -04:00
Jorge Escobar
3b04356fb3
Data sources from S3 (#769)
* Started 535

* Data sources from S3

* lint

* renove breakpoints

* PR comments

* lint

* census data completed

* lint

* renaming data source
2021-10-13 16:00:33 -04:00
Lucas Merrill Brown
b1a4d26be8
Adding persistent poverty tracts (#738)
* persistent poverty working

* fixing left-padding

* running black and adding persistent poverty to comp tool

* fixing bug

* running black and fixing linter

* fixing linter

* fixing linter error
2021-09-22 17:57:08 -04:00
Vincent La
7709836a12
Ticket 355: Adding map to Urban vs Rural Census Tracts (#696)
* Adding urban vs rural notebook

* Adding new code

* Adding settings

* Adding usa.csv

* Adding etl

* Adding etl

* Adding to etl_score

* quick changes to notebook

* Ensuring notebook can run

* Adding urban vs rural notebook

* Adding new code

* Adding settings

* Adding usa.csv

* Adding etl

* Adding etl

* Adding to etl_score

* quick changes to notebook

* Ensuring notebook can run

* adding urban to comparison tool

* renaming file

* adding urban rural to more comp tool outputs

* updating requirements and poetry

* Adding ej screen notebook

* removing ej screen notebook since it's in justice40-tool-iss-719

Co-authored-by: La <ryy0@cdc.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-09-22 12:31:03 -04:00
Lucas Merrill Brown
1c0d87d84b
Add FEMA risk index to score file (#687)
* Add to score file
2021-09-15 13:31:32 -05:00
Lucas Merrill Brown
e94d05882c
Issue 675 & 676: Adding life expectancy and DOE energy burden data (#683)
* Adding two new data sources.
2021-09-15 09:59:28 -05:00
Jorge Escobar
fc5ed37fca
dependabot bump pillow (#681)
* dependabot bump pillow

* updated poetry

* adding encoding to file open
2021-09-14 17:28:59 -04:00
Lucas Merrill Brown
1083e953da
Prototype G (#672)
* wip

* cleanup

* cleanup 2

* fixing import ordering linter error

* updating backend to use score G

* adding percentile to score output

* update tippeanoe compression

Co-authored-by: Jorge Escobar <jorge.e.escobar@omb.eop.gov>
2021-09-14 10:48:11 -04:00
Lucas Merrill Brown
7d13be7651
Ticket 492: Integrate Area Median Income and Poverty measures into ETL (#660)
* Loading AMI and poverty data
2021-09-13 15:36:35 -05:00
Shelby Switzer
ac62933d16
Initial refactor for Score ETL (#618)
* WIP refactor

* Exract score calculations into their own methods

* do all initial df prep in single method

* Fix error in docs for running etl for single dataset

* WIP understanding HUD and linguistic iso data

* Add comments from initial group review on PR

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-09-10 10:34:34 -04:00
Billy Daly
f0900f7b69
Adds National Risk Index data to ETL pipeline (#549)
* Adds dev dependencies to requirements.txt and re-runs black on codebase

* Adds test and code for national risk index etl, still in progress

* Removes test_data from .gitignore

* Adds test data to nation_risk_index tests

* Creates tests and ETL class for NRI data

* Adds tests for load() and transform() methods of NationalRiskIndexETL

* Updates README.md with info about the NRI dataset

* Adds to dos

* Moves tests and test data into a tests/ dir in national_risk_index

* Moves tmp_dir for tests into data/tmp/tests/

* Promotes fixtures to conftest and relocates national_risk_index tests:
The relocation of national_risk_index tests is necessary because tests 
can only use fixtures specified in conftests within the same package

* Fixes issue with df.equals() in test_transform()

* Files reformatted by black

* Commit changes to other files after re-running black

* Fixes unused import that caused lint checks to fail

* Moves tests/ directory to app root for data_pipeline
2021-09-07 20:51:34 -04:00
Lucas Merrill Brown
65ceb7900f
Score F, testing methodology (#510)
* fixing dependency issue

* fixing more dependencies

* including fraction of state AMI

* wip

* nitpick whitespace

* etl working now

* wip on scoring

* fix rename error

* reducing metrics

* fixing score f

* fixing readme

* adding dependency

* passing tests;

* linting/black

* removing unnecessary sample

* fixing error

* adding verify flag on etl/base

Co-authored-by: Jorge Escobar <jorge.e.escobar@omb.eop.gov>
2021-08-24 16:40:54 -04:00
Jorge Escobar
773c035493
AWS Sync Public Read (#508)
* adding layer to mvts

* small fix for GHA

* AWS Sync Public Read

* removed temp file

* updated state media income ftp
2021-08-12 14:17:25 -04:00
lucasmbrown-usds
ce5e8c5351 including fraction of state AMI 2021-08-09 21:30:41 -05:00
lucasmbrown-usds
4ae7eff4c4 adding median income field and running black 2021-08-09 20:47:51 -05:00
Nat Hillard
ec19d86f6f
Adding back census to list of potential datasets, but separating out from standard list (#484)
Error this addresses:
  File "/Users/lucas/Documents/usds/repos/justice40-tool/data/data-pipeline/data_pipeline/etl/runner.py", line 71, in etl_runner
    f"data_pipeline.etl.sources.{dataset['module_dir']}.etl"
TypeError: 'NoneType' object is not subscriptable
2021-08-09 09:52:06 -04:00
Jorge Escobar
f51b0d69d9
Poetry updates for application (#483) 2021-08-06 16:24:30 -04:00
Nat Hillard
9d962eb5d9
Moving from relative imports to absolute to enable poetry run python data-pipeline/application.py [command] (#476) 2021-08-06 11:41:28 -04:00
Nat Hillard
45a8b1c026
Census ETL should use standard ETL form (#474)
* Fixes #473
Census ETL should use standard ETL form

* linter fixes
2021-08-06 11:01:51 -04:00
Nat Hillard
9f3b2f056b
Fixes #467: (#470)
If the census download task is run more than once,
us.csv doubles in size and all data is removed from dataframe
2021-08-05 16:20:18 -04:00
Nat Hillard
c1568e87c0
Data directory should adopt standard Poetry-suggested python package structure (#457)
* Fixes #456 - Our data directory should adopt standard python package structure
* a few missed references
* updating readme
* updating requirements
* Running Black
* Fixes for flake8
* updating pylint
2021-08-05 15:35:54 -04:00