1151 lines
68 KiB
HTML
1151 lines
68 KiB
HTML
<!DOCTYPE html>
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<html lang="en">
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<head>
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<meta charset="UTF-8">
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<title>/c/demo/</title>
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<base href="//www.ncbi.nlm.nih.gov/IEB/ToolBox/C_DOC/lxr/">
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<meta name="description" content="NCBI C Toolkit Cross Reference">
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<meta http-equiv="cache-control" content="max-age=43200">
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<link rel="stylesheet" href="//www.ncbi.nlm.nih.gov/corehtml/ncbi.css">
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<link rel="stylesheet" type="text/css" href="lxr.css">
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</head>
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<body>
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<h2 class="warning" style="padding:10pt">WARNING: C Toolkit is deprecated, please use C++ Toolkit instead</h2>
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<header>
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<div class="nav-menu">
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<a href="/">NCBI Home</a><br>
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<a href="/IEB/">IEB Home</a><br>
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<a href="//www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/INDEX.HTML">C Toolkit docs</a><br>
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<a href="/IEB/ToolBox/CPP_DOC/lxr/source">C++ Toolkit source browser</a><br>
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</div>
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<div class="nav-title">
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<h1 class="main">NCBI C Toolkit Cross Reference</h1>
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<h3 class="banner"><span class="banner"><a class="banner" href="/IEB/ToolBox/C_DOC/lxr/source/">c</a>/​<a class="banner" href="/IEB/ToolBox/C_DOC/lxr/source/demo/">demo</a>/</span></h3>
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</div>
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<div class="nav-mode">
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<div><span class='modes-sel'>Source navigation</span><br><a class='modes' href="/IEB/ToolBox/C_DOC/lxr/ident">Identifier search</a><br><a class="modes" href="/IEB/ToolBox/C_DOC/lxr/search">General search</a><br></div>
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</header>
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<hr>
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<main>
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<div class="dirdesc">
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</div>
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<table class="dircontent">
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<thead>
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<tr class="dirheader">
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<th class="diricon"> </th>
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<th class="dirname">Name</th>
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<th class="dirsize">Size</th>
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<th class="dirtime">Date (UTC)</th>
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<th class="dirdesc">Description</th>
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</tr>
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</thead>
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<tbody>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/../"><img src="/icons/back.gif" alt="folder"></a></td>
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<td class="dirname"><a class="dirfolder" href="/IEB/ToolBox/C_DOC/lxr/source/demo/../">Parent directory</a></td>
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<td class="dirsize">-</td>
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<td class="dirtime">2025-03-15 02:59:52 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/aceread_tst.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/aceread_tst.c">aceread_tst.c</a></td>
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<td class="dirsize">51763 </td>
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<td class="dirtime">2024-01-03 21:54:04 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/alint.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/alint.c">alint.c</a></td>
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<td class="dirsize">5420 </td>
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<td class="dirtime">2008-11-11 19:44:53 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2all.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2all.c">asn2all.c</a></td>
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<td class="dirsize">58031 </td>
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<td class="dirtime">2019-01-16 19:47:27 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2asn.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2asn.c">asn2asn.c</a></td>
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<td class="dirsize">4890 </td>
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<td class="dirtime">2000-05-10 19:04:14 </td>
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<td class="dirdesc"><p>This is a framework for reading an <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ASN.1">ASN.1</a> Seq-entry or <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set,
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doing some processing on it, and outputting it again.</p></td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2asn.mk"><img src="/icons/generic.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2asn.mk">asn2asn.mk</a></td>
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<td class="dirsize">4864 </td>
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<td class="dirtime">1997-08-25 18:18:52 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2fast.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2fast.c">asn2fast.c</a></td>
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<td class="dirsize">9197 </td>
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<td class="dirtime">2003-10-27 16:51:10 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2ff.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2ff.c">asn2ff.c</a></td>
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<td class="dirsize">13038 </td>
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<td class="dirtime">2001-12-21 20:21:51 </td>
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<td class="dirdesc"><p><a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=convert">convert</a> an <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ASN.1">ASN.1</a> entry to flat file format, using the FFPrintArrayPtrs.</p></td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2fsa.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2fsa.c">asn2fsa.c</a></td>
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<td class="dirsize">40004 </td>
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<td class="dirtime">2017-03-19 01:51:02 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2gb.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2gb.c">asn2gb.c</a></td>
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<td class="dirsize">65261 </td>
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<td class="dirtime">2019-01-16 19:47:27 </td>
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<td class="dirdesc">New GenBank flatfile generator application</td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2idx.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2idx.c">asn2idx.c</a></td>
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<td class="dirsize">7219 </td>
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<td class="dirtime">2010-11-12 19:25:18 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2xml.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2xml.c">asn2xml.c</a></td>
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<td class="dirsize">3750 </td>
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<td class="dirtime">2001-08-10 18:56:42 </td>
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<td class="dirdesc"><p>This program is based on <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn2asn.c">asn2asn.c</a> but modified specifically to
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efficiently <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=convert">convert</a> <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn.1">asn.1</a> Seq-entry or <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set into XML.</p></td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnbarval.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnbarval.c">asnbarval.c</a></td>
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<td class="dirsize">35191 </td>
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<td class="dirtime">2010-02-23 20:20:33 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asndhuff.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asndhuff.c">asndhuff.c</a></td>
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<td class="dirsize">8002 </td>
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<td class="dirtime">1998-06-12 19:27:02 </td>
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<td class="dirdesc">asndhuff -- decompresses a compressed ASN,1 (CASN) file.</td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asndisc.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asndisc.c">asndisc.c</a></td>
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<td class="dirsize">47029 </td>
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<td class="dirtime">2015-04-26 17:46:59 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnmacro.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnmacro.c">asnmacro.c</a></td>
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<td class="dirsize">20092 </td>
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<td class="dirtime">2015-09-03 13:52:16 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnstrip.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnstrip.c">asnstrip.c</a></td>
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<td class="dirsize">20017 </td>
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<td class="dirtime">2009-05-14 13:51:53 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnval.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asnval.c">asnval.c</a></td>
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<td class="dirsize">81161 </td>
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<td class="dirtime">2019-01-16 19:47:27 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/batch.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/batch.c">batch.c</a></td>
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<td class="dirsize">38122 </td>
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<td class="dirtime">2000-08-30 16:44:20 </td>
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<td class="dirdesc">Main file for WWW and Command Line BatchEntrez programs</td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bbone.prt"><img src="/icons/generic.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bbone.prt">bbone.prt</a></td>
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<td class="dirsize">14014 </td>
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<td class="dirtime">1997-08-25 18:19:08 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bioseq.ent"><img src="/icons/generic.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bioseq.ent">bioseq.ent</a></td>
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<td class="dirsize">1452 </td>
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<td class="dirtime">1997-08-25 18:19:10 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bioseq.set"><img src="/icons/generic.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bioseq.set">bioseq.set</a></td>
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<td class="dirsize">13798 </td>
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<td class="dirtime">1997-08-25 18:19:11 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bl2seq.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bl2seq.c">bl2seq.c</a></td>
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<td class="dirsize">46840 </td>
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<td class="dirtime">2009-05-27 19:29:17 </td>
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<td class="dirdesc"><p>COPYRIGHT NOTICE *
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This software/database is categorized as "United States Government *
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Work" under the terms of the United States Copyright Act.</p></td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blast_driver.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blast_driver.c">blast_driver.c</a></td>
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<td class="dirsize">31649 </td>
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<td class="dirtime">2007-10-23 16:03:23 </td>
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<td class="dirdesc"><p>File name:
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<a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Author">Author</a>: Ilya Dondoshansky
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Contents: Main <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=function">function</a> for running BLAST
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$Revision: <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/1.129">1.129</a> $</p></td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastalign.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastalign.c">blastalign.c</a></td>
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<td class="dirsize">10866 </td>
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<td class="dirtime">2000-02-29 22:08:41 </td>
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<td class="dirdesc"><p>This is a sample program to call BandAlign</p></td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastall.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastall.c">blastall.c</a></td>
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<td class="dirsize">111944 </td>
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<td class="dirtime">2011-12-19 18:40:17 </td>
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<td class="dirdesc"><p>COPYRIGHT NOTICE *
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This software/database is categorized as "United States Government *
|
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Work" under the terms of the United States Copyright Act.</p></td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastclust.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastclust.c">blastclust.c</a></td>
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<td class="dirsize">52605 </td>
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<td class="dirtime">2011-12-19 18:40:17 </td>
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<td class="dirdesc">Program to perform a single-linkage clustering of a set of protein or DNA</td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastpgp.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/blastpgp.c">blastpgp.c</a></td>
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<td class="dirsize">80254 </td>
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<td class="dirtime">2008-03-31 13:35:18 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bulk2htgs.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/bulk2htgs.c">bulk2htgs.c</a></td>
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<td class="dirsize">12119 </td>
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<td class="dirtime">1999-11-03 15:01:22 </td>
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<td class="dirdesc"> </td>
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</tr>
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<tr class="dirrow2">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ccp.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ccp.c">ccp.c</a></td>
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<td class="dirsize">13284 </td>
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<td class="dirtime">1998-12-18 16:24:52 </td>
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<td class="dirdesc">coiled-coil prediction</td>
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</tr>
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<tr class="dirrow1">
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<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ccpv.c"><img src="/icons/c.gif" alt=''></a></td>
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<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ccpv.c">ccpv.c</a></td>
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<td class="dirsize">13869 </td>
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<td class="dirtime">1998-09-16 18:40:33 </td>
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<td class="dirdesc">coiled coil prediction</td>
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</tr>
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<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cdscan.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cdscan.c">cdscan.c</a></td>
|
|
<td class="dirsize">24777 </td>
|
|
<td class="dirtime">1998-06-12 16:36:33 </td>
|
|
<td class="dirdesc">scans through <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=sequence">sequence</a> records on the Entrez discs</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/checksub.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/checksub.c">checksub.c</a></td>
|
|
<td class="dirsize">1603 </td>
|
|
<td class="dirtime">1998-08-24 20:42:32 </td>
|
|
<td class="dirdesc"><p>reads a sequenct submission with the object loaders</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cleanasn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cleanasn.c">cleanasn.c</a></td>
|
|
<td class="dirsize">377418 </td>
|
|
<td class="dirtime">2017-03-27 20:22:03 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsgn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsgn.c">cnsgn.c</a></td>
|
|
<td class="dirsize">37682 </td>
|
|
<td class="dirtime">1998-12-18 16:24:53 </td>
|
|
<td class="dirdesc">consign - codon biased orf selection</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsgnv.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsgnv.c">cnsgnv.c</a></td>
|
|
<td class="dirsize">30644 </td>
|
|
<td class="dirtime">1999-03-13 03:43:16 </td>
|
|
<td class="dirdesc">consign - codon biased orf assignment</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsrt.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsrt.c">cnsrt.c</a></td>
|
|
<td class="dirsize">4448 </td>
|
|
<td class="dirtime">1998-12-18 16:24:53 </td>
|
|
<td class="dirdesc">consort - codon usage</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsrtv.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cnsrtv.c">cnsrtv.c</a></td>
|
|
<td class="dirsize">13753 </td>
|
|
<td class="dirtime">1998-09-16 18:40:34 </td>
|
|
<td class="dirdesc">consort - codon usage/bias tree</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/condense.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/condense.c">condense.c</a></td>
|
|
<td class="dirsize">15595 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/copymat.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/copymat.c">copymat.c</a></td>
|
|
<td class="dirsize">30355 </td>
|
|
<td class="dirtime">2016-06-21 14:55:29 </td>
|
|
<td class="dirdesc"><p>File name:
|
|
Authors: Alejandro Schaffer, Sergei Shavirin
|
|
Contents: main routines for copymatrices program to <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=convert">convert</a>
|
|
score matrices <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=output">output</a> by makematrices into a single byte-encoded file.</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cspeedtest.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/cspeedtest.c">cspeedtest.c</a></td>
|
|
<td class="dirsize">37875 </td>
|
|
<td class="dirtime">2012-12-20 22:10:28 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/debruijn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/debruijn.c">debruijn.c</a></td>
|
|
<td class="dirsize">3128 </td>
|
|
<td class="dirtime">2004-02-09 21:24:59 </td>
|
|
<td class="dirdesc"><p>example driver for de Bruijn sequences.
|
|
this code generates all n-mers over a protein
|
|
or dna alphabet. useful for creating test sequences.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/delta.prt"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/delta.prt">delta.prt</a></td>
|
|
<td class="dirsize">10273 </td>
|
|
<td class="dirtime">1997-08-25 18:19:26 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/diffshift.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/diffshift.c">diffshift.c</a></td>
|
|
<td class="dirsize">5527 </td>
|
|
<td class="dirtime">2010-11-26 19:03:55 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dosimple.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dosimple.c">dosimple.c</a></td>
|
|
<td class="dirsize">675 </td>
|
|
<td class="dirtime">1998-08-24 20:43:41 </td>
|
|
<td class="dirdesc"><p>test program for simple <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=sequence">sequence</a> (fasta format)</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dotmain.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dotmain.c">dotmain.c</a></td>
|
|
<td class="dirsize">26891 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc">contains main <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=function">function</a> for dot <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=matrix">matrix</a> <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=viewer">viewer</a></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dst.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dst.c">dst.c</a></td>
|
|
<td class="dirsize">8483 </td>
|
|
<td class="dirtime">1998-12-18 16:24:54 </td>
|
|
<td class="dirdesc">a dust utility</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dtapp.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dtapp.c">dtapp.c</a></td>
|
|
<td class="dirsize">4149 </td>
|
|
<td class="dirtime">1997-08-25 18:19:29 </td>
|
|
<td class="dirdesc">Demo application in which the desktop is the main application</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dustn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dustn.c">dustn.c</a></td>
|
|
<td class="dirsize">5937 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc"><p><a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Author">Author</a> Hugues Sicotte
|
|
Stand-alone program to dust one <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=sequence">sequence</a>.
|
|
future improvements are to take a whole fasta library as input.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dustv.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/dustv.c">dustv.c</a></td>
|
|
<td class="dirsize">15300 </td>
|
|
<td class="dirtime">1998-11-12 20:04:11 </td>
|
|
<td class="dirdesc">a dust utility</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/elecpcr.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/elecpcr.c">elecpcr.c</a></td>
|
|
<td class="dirsize">32814 </td>
|
|
<td class="dirtime">2002-07-25 14:15:09 </td>
|
|
<td class="dirdesc">Main program for WWW and Command-Line Electronic PCR</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/entrcmd.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/entrcmd.c">entrcmd.c</a></td>
|
|
<td class="dirsize">72294 </td>
|
|
<td class="dirtime">2011-12-19 18:40:17 </td>
|
|
<td class="dirdesc">non-interactive command line interface for Entrez</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/entrez.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/entrez.c">entrez.c</a></td>
|
|
<td class="dirsize">50098 </td>
|
|
<td class="dirtime">2006-07-13 17:12:38 </td>
|
|
<td class="dirdesc"><p>PUBLIC DOMAIN NOTICE
|
|
National Center for Biotechnology Information (NCBI)
|
|
This software/database is a "United States Government Work" under the
|
|
terms of the United States Copyright Act.</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/entrez2.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/entrez2.c">entrez2.c</a></td>
|
|
<td class="dirsize">36055 </td>
|
|
<td class="dirtime">2012-06-11 22:38:42 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/epi.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/epi.c">epi.c</a></td>
|
|
<td class="dirsize">10816 </td>
|
|
<td class="dirtime">1999-02-25 15:09:17 </td>
|
|
<td class="dirdesc">epi - protein and nucleic acid low complexity</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/epiv.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/epiv.c">epiv.c</a></td>
|
|
<td class="dirsize">17072 </td>
|
|
<td class="dirtime">1998-09-16 18:40:35 </td>
|
|
<td class="dirdesc">low complexity regions in nucleotides and peptides</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/errhdr.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/errhdr.c">errhdr.c</a></td>
|
|
<td class="dirsize">2420 </td>
|
|
<td class="dirtime">1997-08-25 18:19:50 </td>
|
|
<td class="dirdesc"><p>include <<a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ncbi.h">ncbi.h</a>></p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/example.prt"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/example.prt">example.prt</a></td>
|
|
<td class="dirsize">10257 </td>
|
|
<td class="dirtime">1997-08-25 18:19:51 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/export_cmt.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/export_cmt.c">export_cmt.c</a></td>
|
|
<td class="dirsize">6789 </td>
|
|
<td class="dirtime">2012-07-09 14:39:14 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fa2htgs.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fa2htgs.c">fa2htgs.c</a></td>
|
|
<td class="dirsize">37926 </td>
|
|
<td class="dirtime">2007-05-07 13:29:11 </td>
|
|
<td class="dirdesc"><p>This is a framework for reading an <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ASN.1">ASN.1</a> Seq-entry or <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set,
|
|
doing some processing on it, and outputting it again.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fastacmd.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fastacmd.c">fastacmd.c</a></td>
|
|
<td class="dirsize">9931 </td>
|
|
<td class="dirtime">2005-06-22 13:55:22 </td>
|
|
<td class="dirdesc">FASTA retrievel system using ISAM indexes</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fdef.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fdef.c">fdef.c</a></td>
|
|
<td class="dirsize">2666 </td>
|
|
<td class="dirtime">1998-08-24 20:43:43 </td>
|
|
<td class="dirdesc"><p>test program for <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=sequence">sequence</a> <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=display">display</a>, <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=SeqPort">SeqPort</a> and ToFasta</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fdselect.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fdselect.c">fdselect.c</a></td>
|
|
<td class="dirsize">15543 </td>
|
|
<td class="dirtime">2000-11-22 21:10:12 </td>
|
|
<td class="dirdesc">Create few subsets of FASTA <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=database">database</a>.</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fetchent.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/fetchent.c">fetchent.c</a></td>
|
|
<td class="dirsize">10464 </td>
|
|
<td class="dirtime">1999-01-25 18:15:27 </td>
|
|
<td class="dirdesc"><p>PUBLIC DOMAIN NOTICE
|
|
National Center for Biotechnology Information (NCBI)
|
|
This software/database is a "United States Government Work" under the
|
|
terms of the United States Copyright Act.</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/findspl.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/findspl.c">findspl.c</a></td>
|
|
<td class="dirsize">4367 </td>
|
|
<td class="dirtime">1998-08-26 18:41:09 </td>
|
|
<td class="dirdesc">Find protein splice sites</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/flint.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/flint.c">flint.c</a></td>
|
|
<td class="dirsize">6291 </td>
|
|
<td class="dirtime">2004-04-20 21:04:46 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/formatdb.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/formatdb.c">formatdb.c</a></td>
|
|
<td class="dirsize">41140 </td>
|
|
<td class="dirtime">2007-08-21 20:07:49 </td>
|
|
<td class="dirdesc">formats FASTA databases for use by BLAST</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/formatrpsdb.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/formatrpsdb.c">formatrpsdb.c</a></td>
|
|
<td class="dirsize">41594 </td>
|
|
<td class="dirtime">2010-10-20 13:09:42 </td>
|
|
<td class="dirdesc"><a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=convert">convert</a> a collection of files, each containing</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gbf2tbl.pl"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gbf2tbl.pl">gbf2tbl.pl</a></td>
|
|
<td class="dirsize">14691 </td>
|
|
<td class="dirtime">2019-03-01 18:43:44 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gbf2xml.pl"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gbf2xml.pl">gbf2xml.pl</a></td>
|
|
<td class="dirsize">13565 </td>
|
|
<td class="dirtime">2019-06-07 20:17:07 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gbseqget.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gbseqget.c">gbseqget.c</a></td>
|
|
<td class="dirsize">13675 </td>
|
|
<td class="dirtime">2004-04-26 16:51:16 </td>
|
|
<td class="dirdesc">Demo to fetch by accession, write GBSet XML</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gene2xml.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gene2xml.c">gene2xml.c</a></td>
|
|
<td class="dirsize">14861 </td>
|
|
<td class="dirtime">2017-03-01 18:43:29 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/genget.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/genget.c">genget.c</a></td>
|
|
<td class="dirsize">14005 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc"><p>entrez version</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/get_ec.pl"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/get_ec.pl">get_ec.pl</a></td>
|
|
<td class="dirsize">3244 </td>
|
|
<td class="dirtime">2012-02-16 18:23:47 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getfasta.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getfasta.c">getfasta.c</a></td>
|
|
<td class="dirsize">4293 </td>
|
|
<td class="dirtime">1998-08-24 20:43:44 </td>
|
|
<td class="dirdesc"><p><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getseq.c">getseq.c</a>
|
|
entrez version</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getmesh.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getmesh.c">getmesh.c</a></td>
|
|
<td class="dirsize">1560 </td>
|
|
<td class="dirtime">1998-08-24 20:44:45 </td>
|
|
<td class="dirdesc"><p>gets mesh terms from a Medline-entry</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getpub.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getpub.c">getpub.c</a></td>
|
|
<td class="dirsize">2286 </td>
|
|
<td class="dirtime">2011-12-19 18:40:17 </td>
|
|
<td class="dirdesc"><p>does an indexed lookup for <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=medline">medline</a> entries by <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=medline">medline</a> uid</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getunfin.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/getunfin.c">getunfin.c</a></td>
|
|
<td class="dirsize">3515 </td>
|
|
<td class="dirtime">2002-04-04 16:00:07 </td>
|
|
<td class="dirdesc"><p>include <<a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ncbi.h">ncbi.h</a>></p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gi2accn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gi2accn.c">gi2accn.c</a></td>
|
|
<td class="dirsize">12641 </td>
|
|
<td class="dirtime">2006-04-13 20:03:22 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gil2bin.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/gil2bin.c">gil2bin.c</a></td>
|
|
<td class="dirsize">3480 </td>
|
|
<td class="dirtime">2011-12-19 18:40:17 </td>
|
|
<td class="dirdesc"><p>Revision <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/1.0">1.0</a>$
|
|
$Log: ,v $
|
|
Revision <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/6.5">6.5</a> 20 18:40:17 gouriano
|
|
Corrected printf formatting.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/idcleanscan.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/idcleanscan.c">idcleanscan.c</a></td>
|
|
<td class="dirsize">30141 </td>
|
|
<td class="dirtime">2000-06-27 21:19:00 </td>
|
|
<td class="dirdesc"><p>scans binary <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ASN.1">ASN.1</a> <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set release files in preparation for ID <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=cleanup">cleanup</a></p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/indexpub.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/indexpub.c">indexpub.c</a></td>
|
|
<td class="dirsize">1645 </td>
|
|
<td class="dirtime">2011-12-19 18:40:17 </td>
|
|
<td class="dirdesc"><p>indexes a Pub-set by Medline UID</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ingenmain.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ingenmain.c">ingenmain.c</a></td>
|
|
<td class="dirsize">11024 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc">contains main <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=function">function</a> for ingenue</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/insdseqget.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/insdseqget.c">insdseqget.c</a></td>
|
|
<td class="dirsize">13851 </td>
|
|
<td class="dirtime">2010-11-12 19:25:18 </td>
|
|
<td class="dirdesc">Demo to fetch by accession, write <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=INSDSet">INSDSet</a> XML</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/MakeGapTable.pl"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/MakeGapTable.pl">MakeGapTable.pl</a></td>
|
|
<td class="dirsize">1711 </td>
|
|
<td class="dirtime">2016-09-21 19:19:26 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/makemat.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/makemat.c">makemat.c</a></td>
|
|
<td class="dirsize">21660 </td>
|
|
<td class="dirtime">2005-07-28 14:52:22 </td>
|
|
<td class="dirdesc"><p>File name:
|
|
<a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Author">Author</a>: Alejandro Schaffer
|
|
Contents: main routines for makematrices program to <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=convert">convert</a>
|
|
PSI-BLAST checkpoints into score matrices.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/makeset.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/makeset.c">makeset.c</a></td>
|
|
<td class="dirsize">2853 </td>
|
|
<td class="dirtime">2016-09-02 15:04:17 </td>
|
|
<td class="dirdesc"><p>build a <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set from a bunch of Seq-entry files
|
|
expects a file of file names in stdin
|
|
prints the <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set out stdout in binary</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/medline.ent"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/medline.ent">medline.ent</a></td>
|
|
<td class="dirsize">2207 </td>
|
|
<td class="dirtime">1997-08-25 18:20:20 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/medline.prt"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/medline.prt">medline.prt</a></td>
|
|
<td class="dirsize">36480 </td>
|
|
<td class="dirtime">1997-08-25 18:20:22 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/megablast.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/megablast.c">megablast.c</a></td>
|
|
<td class="dirsize">89027 </td>
|
|
<td class="dirtime">2009-06-01 14:33:38 </td>
|
|
<td class="dirdesc"><p>COPYRIGHT NOTICE *
|
|
This software/database is categorized as "United States Government *
|
|
Work" under the terms of the United States Copyright Act.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/mts.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/mts.c">mts.c</a></td>
|
|
<td class="dirsize">11332 </td>
|
|
<td class="dirtime">1999-07-13 13:07:33 </td>
|
|
<td class="dirdesc">profile <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=search">search</a></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/netentcf.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/netentcf.c">netentcf.c</a></td>
|
|
<td class="dirsize">3644 </td>
|
|
<td class="dirtime">1998-12-08 16:52:42 </td>
|
|
<td class="dirdesc">Network Entrez configuration</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/nps2gps.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/nps2gps.c">nps2gps.c</a></td>
|
|
<td class="dirsize">66912 </td>
|
|
<td class="dirtime">2016-01-25 19:51:16 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/packfilt.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/packfilt.c">packfilt.c</a></td>
|
|
<td class="dirsize">2684 </td>
|
|
<td class="dirtime">1999-04-02 15:29:18 </td>
|
|
<td class="dirdesc"><p>Packs input stream if <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set of <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=SeqEntry">SeqEntry</a></p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/patric2tbl.pl"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/patric2tbl.pl">patric2tbl.pl</a></td>
|
|
<td class="dirsize">1784 </td>
|
|
<td class="dirtime">2012-02-13 15:20:29 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/profiles.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/profiles.c">profiles.c</a></td>
|
|
<td class="dirsize">72833 </td>
|
|
<td class="dirtime">2005-07-28 14:52:22 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/qbatch.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/qbatch.c">qbatch.c</a></td>
|
|
<td class="dirsize">30031 </td>
|
|
<td class="dirtime">2005-10-13 13:53:51 </td>
|
|
<td class="dirdesc">WWW and Command-line Batch Entrez using Entre2 and ID1</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rast2sqn.sh"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rast2sqn.sh">rast2sqn.sh</a></td>
|
|
<td class="dirsize">606 </td>
|
|
<td class="dirtime">2012-06-09 01:22:53 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rastbatch.sh"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rastbatch.sh">rastbatch.sh</a></td>
|
|
<td class="dirsize">195 </td>
|
|
<td class="dirtime">2012-02-13 15:20:29 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/raw2delt.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/raw2delt.c">raw2delt.c</a></td>
|
|
<td class="dirsize">17348 </td>
|
|
<td class="dirtime">2007-10-24 18:48:47 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/readbclhits.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/readbclhits.c">readbclhits.c</a></td>
|
|
<td class="dirsize">4601 </td>
|
|
<td class="dirtime">2002-10-08 15:31:55 </td>
|
|
<td class="dirdesc">Program to read the binary hits file from blastclust and produce a text</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/reblobber.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/reblobber.c">reblobber.c</a></td>
|
|
<td class="dirsize">58624 </td>
|
|
<td class="dirtime">2012-03-23 20:54:23 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/releasescan.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/releasescan.c">releasescan.c</a></td>
|
|
<td class="dirsize">11664 </td>
|
|
<td class="dirtime">2003-08-27 12:52:14 </td>
|
|
<td class="dirdesc"><p>scans binary <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ASN.1">ASN.1</a> <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=Bioseq">Bioseq</a>-set release files</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/replicon.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/replicon.c">replicon.c</a></td>
|
|
<td class="dirsize">9971 </td>
|
|
<td class="dirtime">2012-03-23 20:55:14 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rpsblast.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rpsblast.c">rpsblast.c</a></td>
|
|
<td class="dirsize">27586 </td>
|
|
<td class="dirtime">2008-07-23 14:06:57 </td>
|
|
<td class="dirdesc">Main file for RPS BLAST program</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rtestval.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/rtestval.c">rtestval.c</a></td>
|
|
<td class="dirsize">7864 </td>
|
|
<td class="dirtime">2004-10-07 21:31:19 </td>
|
|
<td class="dirdesc"><p><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testval.c">testval.c</a>
|
|
check translations
|
|
check for stop codons
|
|
Check for and fix non <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/3.0">3.0</a> asn spec things
|
|
$</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sapcitfetch.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sapcitfetch.c">sapcitfetch.c</a></td>
|
|
<td class="dirsize">6960 </td>
|
|
<td class="dirtime">2004-11-26 22:04:58 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/scantest.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/scantest.c">scantest.c</a></td>
|
|
<td class="dirsize">60571 </td>
|
|
<td class="dirtime">2012-11-01 19:20:16 </td>
|
|
<td class="dirdesc">template for custom scans of <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ASN.1">ASN.1</a> release files</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/searchv.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/searchv.c">searchv.c</a></td>
|
|
<td class="dirsize">15439 </td>
|
|
<td class="dirtime">1999-03-13 03:43:45 </td>
|
|
<td class="dirdesc">nucleotide or peptide pattern match</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/seedtop.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/seedtop.c">seedtop.c</a></td>
|
|
<td class="dirsize">19702 </td>
|
|
<td class="dirtime">2008-01-09 19:17:49 </td>
|
|
<td class="dirdesc"><p>File name:
|
|
Authors: Zheng Zhang and Alejandro Schaffer
|
|
Maintainer: Alejandro Schaffer
|
|
Contents: main routine for pseed3, stand-alone counterpart to PHI-BLAST.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/seqget.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/seqget.c">seqget.c</a></td>
|
|
<td class="dirsize">4405 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/seqtest.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/seqtest.c">seqtest.c</a></td>
|
|
<td class="dirsize">5060 </td>
|
|
<td class="dirtime">2011-12-19 18:40:17 </td>
|
|
<td class="dirdesc"><p>test program for <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=sequence">sequence</a> <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=display">display</a>, <a class='' href="/IEB/ToolBox/C_DOC/lxr/ident?i=SeqPort">SeqPort</a> and ToFasta</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/setsts.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/setsts.c">setsts.c</a></td>
|
|
<td class="dirsize">6057 </td>
|
|
<td class="dirtime">1997-08-25 18:20:40 </td>
|
|
<td class="dirdesc">Program for formatting memory map for WWW STS Search Tool</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sgd2asn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sgd2asn.c">sgd2asn.c</a></td>
|
|
<td class="dirsize">17554 </td>
|
|
<td class="dirtime">2000-11-16 18:14:47 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sigme.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sigme.c">sigme.c</a></td>
|
|
<td class="dirsize">12268 </td>
|
|
<td class="dirtime">1998-12-18 16:24:56 </td>
|
|
<td class="dirdesc">signal peptide and transmembrane region prediction</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sigmev.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sigmev.c">sigmev.c</a></td>
|
|
<td class="dirsize">23014 </td>
|
|
<td class="dirtime">1998-11-24 15:42:01 </td>
|
|
<td class="dirdesc">signal peptides and transmembrane regions</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/snpscan.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/snpscan.c">snpscan.c</a></td>
|
|
<td class="dirsize">25928 </td>
|
|
<td class="dirtime">2000-06-06 15:30:10 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/snpsynon.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/snpsynon.c">snpsynon.c</a></td>
|
|
<td class="dirsize">18254 </td>
|
|
<td class="dirtime">2000-05-25 14:44:29 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sortbyquote.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sortbyquote.c">sortbyquote.c</a></td>
|
|
<td class="dirsize">5775 </td>
|
|
<td class="dirtime">2005-10-21 21:21:25 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sortcmd.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sortcmd.c">sortcmd.c</a></td>
|
|
<td class="dirsize">11144 </td>
|
|
<td class="dirtime">2006-05-11 18:56:29 </td>
|
|
<td class="dirdesc">Main file for sortcmd standalone executable.</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/spideymain.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/spideymain.c">spideymain.c</a></td>
|
|
<td class="dirsize">27743 </td>
|
|
<td class="dirtime">2005-11-17 17:13:07 </td>
|
|
<td class="dirdesc">main functions for running Spidey as a standalone</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sqn2agp.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sqn2agp.c">sqn2agp.c</a></td>
|
|
<td class="dirsize">22965 </td>
|
|
<td class="dirtime">2014-11-04 01:57:25 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/src_chk.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/src_chk.c">src_chk.c</a></td>
|
|
<td class="dirsize">39652 </td>
|
|
<td class="dirtime">2013-08-30 14:34:13 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/srchaa.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/srchaa.c">srchaa.c</a></td>
|
|
<td class="dirsize">14765 </td>
|
|
<td class="dirtime">1999-07-13 13:07:32 </td>
|
|
<td class="dirdesc">peptide pattern match</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/srchnt.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/srchnt.c">srchnt.c</a></td>
|
|
<td class="dirsize">10159 </td>
|
|
<td class="dirtime">1999-07-13 13:07:32 </td>
|
|
<td class="dirdesc">nucleotide pattern match</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/subfuse.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/subfuse.c">subfuse.c</a></td>
|
|
<td class="dirsize">7122 </td>
|
|
<td class="dirtime">2018-03-09 20:40:28 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/submit.prt"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/submit.prt">submit.prt</a></td>
|
|
<td class="dirsize">10141 </td>
|
|
<td class="dirtime">1997-08-25 18:20:46 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sugint.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/sugint.c">sugint.c</a></td>
|
|
<td class="dirsize">5803 </td>
|
|
<td class="dirtime">2009-04-16 18:36:22 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/taxblast_main.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/taxblast_main.c">taxblast_main.c</a></td>
|
|
<td class="dirsize">3202 </td>
|
|
<td class="dirtime">2008-09-09 19:28:43 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/tbl2asn.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/tbl2asn.c">tbl2asn.c</a></td>
|
|
<td class="dirsize">263202 </td>
|
|
<td class="dirtime">2023-11-08 21:26:17 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/tbl_chk.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/tbl_chk.c">tbl_chk.c</a></td>
|
|
<td class="dirsize">39225 </td>
|
|
<td class="dirtime">2010-08-05 16:18:48 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/tblfix.pl"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/tblfix.pl">tblfix.pl</a></td>
|
|
<td class="dirsize">11211 </td>
|
|
<td class="dirtime">2014-07-22 21:00:07 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/test.prt"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/test.prt">test.prt</a></td>
|
|
<td class="dirsize">14432 </td>
|
|
<td class="dirtime">1997-08-25 18:20:48 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testcgi.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testcgi.c">testcgi.c</a></td>
|
|
<td class="dirsize">31370 </td>
|
|
<td class="dirtime">2007-06-26 17:59:29 </td>
|
|
<td class="dirdesc">lm</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testcore.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testcore.c">testcore.c</a></td>
|
|
<td class="dirsize">14696 </td>
|
|
<td class="dirtime">2011-12-19 18:40:17 </td>
|
|
<td class="dirdesc">Test CORELIB functionality</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testent2.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testent2.c">testent2.c</a></td>
|
|
<td class="dirsize">20120 </td>
|
|
<td class="dirtime">2014-11-04 19:28:11 </td>
|
|
<td class="dirdesc"><p>include <<a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/ncbi.h">ncbi.h</a>></p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testmem.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testmem.c">testmem.c</a></td>
|
|
<td class="dirsize">1950 </td>
|
|
<td class="dirtime">1999-04-02 14:53:44 </td>
|
|
<td class="dirdesc"><p>test transforms of <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/asn.1">asn.1</a> to and from memory buffer</p></td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testobj.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testobj.c">testobj.c</a></td>
|
|
<td class="dirsize">2168 </td>
|
|
<td class="dirtime">1998-08-24 20:45:58 </td>
|
|
<td class="dirdesc"><p>test program for object loaders</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testprt.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testprt.c">testprt.c</a></td>
|
|
<td class="dirsize">4289 </td>
|
|
<td class="dirtime">1997-08-25 18:20:54 </td>
|
|
<td class="dirdesc"><p>test program for print functions</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testval.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/testval.c">testval.c</a></td>
|
|
<td class="dirsize">6504 </td>
|
|
<td class="dirtime">2003-05-13 16:02:42 </td>
|
|
<td class="dirdesc"><p>check translations
|
|
check for stop codons
|
|
Check for and fix non <a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/3.0">3.0</a> asn spec things</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/trna2sap.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/trna2sap.c">trna2sap.c</a></td>
|
|
<td class="dirsize">14610 </td>
|
|
<td class="dirtime">2005-10-04 20:22:19 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/trna2tbl.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/trna2tbl.c">trna2tbl.c</a></td>
|
|
<td class="dirsize">6269 </td>
|
|
<td class="dirtime">2024-05-16 15:28:15 </td>
|
|
<td class="dirdesc">lm</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/trna2tbl.rb"><img src="/icons/generic.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/trna2tbl.rb">trna2tbl.rb</a></td>
|
|
<td class="dirsize">2051 </td>
|
|
<td class="dirtime">2012-02-13 19:28:48 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/twop.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/twop.c">twop.c</a></td>
|
|
<td class="dirsize">12716 </td>
|
|
<td class="dirtime">1998-09-16 18:19:32 </td>
|
|
<td class="dirdesc">best id blast of two proteins</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/twopv.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/twopv.c">twopv.c</a></td>
|
|
<td class="dirsize">22429 </td>
|
|
<td class="dirtime">1998-12-18 16:24:58 </td>
|
|
<td class="dirdesc">region of best blast identity</td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/udvmain.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/udvmain.c">udvmain.c</a></td>
|
|
<td class="dirsize">9407 </td>
|
|
<td class="dirtime">2000-04-10 21:41:26 </td>
|
|
<td class="dirdesc"><p>PUBLIC DOMAIN NOTICE
|
|
National Center for Biotechnology Information (NCBI)
|
|
This software/database is a "United States Government Work" under the
|
|
terms of the United States Copyright Act.</p></td>
|
|
</tr>
|
|
<tr class="dirrow1">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/vecscreen.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/vecscreen.c">vecscreen.c</a></td>
|
|
<td class="dirsize">10083 </td>
|
|
<td class="dirtime">2006-04-10 19:21:21 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/vsmapp.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/vsmapp.c">vsmapp.c</a></td>
|
|
<td class="dirsize">4873 </td>
|
|
<td class="dirtime">1997-08-25 18:20:56 </td>
|
|
<td class="dirdesc">Demo application which puts up a single window and</td>
|
|
</tr>
|
|
<tr class="dirrow2">
|
|
<td class="diricon"><a class="" href="/IEB/ToolBox/C_DOC/lxr/source/demo/xlint.c"><img src="/icons/c.gif" alt=''></a></td>
|
|
<td class="dirname"><a class="dirfile" href="/IEB/ToolBox/C_DOC/lxr/source/demo/xlint.c">xlint.c</a></td>
|
|
<td class="dirsize">5304 </td>
|
|
<td class="dirtime">2011-05-26 20:14:30 </td>
|
|
<td class="dirdesc"> </td>
|
|
</tr>
|
|
</tbody>
|
|
</table>
|
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<span style="float:left">Generated by the LXR 2.3.5. – <span class=indexstate>Indexed on 2025-03-15 03:00:24 UTC</span>
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