Search Toolkit Book for CNtSite
#include <objects/varrep/NtSite.hpp>
Inheritance diagram for CNtSite:
Collaboration diagram for CNtSite:
Public Member Functions | |
| CNtSite (void) | |
| ~CNtSite (void) | |
| Public Member Functions inherited from CNtSite_Base | |
| CNtSite_Base (void) | |
| virtual | ~CNtSite_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetSeqid (void) const |
| Check if a value has been assigned to Seqid data member. More... | |
| bool | CanGetSeqid (void) const |
| Check if it is safe to call GetSeqid method. More... | |
| void | ResetSeqid (void) |
| Reset Seqid data member. More... | |
| const TSeqid & | GetSeqid (void) const |
| Get the Seqid member data. More... | |
| void | SetSeqid (const TSeqid &value) |
| Assign a value to Seqid data member. More... | |
| void | SetSeqid (TSeqid &&value) |
| TSeqid & | SetSeqid (void) |
| Assign a value to Seqid data member. More... | |
| bool | IsSetSeqtype (void) const |
| Check if a value has been assigned to Seqtype data member. More... | |
| bool | CanGetSeqtype (void) const |
| Check if it is safe to call GetSeqtype method. More... | |
| void | ResetSeqtype (void) |
| Reset Seqtype data member. More... | |
| TSeqtype | GetSeqtype (void) const |
| Get the Seqtype member data. More... | |
| void | SetSeqtype (TSeqtype value) |
| Assign a value to Seqtype data member. More... | |
| TSeqtype & | SetSeqtype (void) |
| Assign a value to Seqtype data member. More... | |
| bool | IsSetBase (void) const |
| Check if a value has been assigned to Base data member. More... | |
| bool | CanGetBase (void) const |
| Check if it is safe to call GetBase method. More... | |
| void | ResetBase (void) |
| Reset Base data member. More... | |
| const TBase & | GetBase (void) const |
| Get the Base member data. More... | |
| void | SetBase (TBase &value) |
| Assign a value to Base data member. More... | |
| TBase & | SetBase (void) |
| Assign a value to Base data member. More... | |
| bool | IsSetOffset (void) const |
| Check if a value has been assigned to Offset data member. More... | |
| bool | CanGetOffset (void) const |
| Check if it is safe to call GetOffset method. More... | |
| void | ResetOffset (void) |
| Reset Offset data member. More... | |
| const TOffset & | GetOffset (void) const |
| Get the Offset member data. More... | |
| void | SetOffset (TOffset &value) |
| Assign a value to Offset data member. More... | |
| TOffset & | SetOffset (void) |
| Assign a value to Offset data member. More... | |
| bool | IsSetUtr (void) const |
| Check if a value has been assigned to Utr data member. More... | |
| bool | CanGetUtr (void) const |
| Check if it is safe to call GetUtr method. More... | |
| void | ResetUtr (void) |
| Reset Utr data member. More... | |
| const TUtr & | GetUtr (void) const |
| Get the Utr member data. More... | |
| void | SetUtr (TUtr &value) |
| Assign a value to Utr data member. More... | |
| TUtr & | SetUtr (void) |
| Assign a value to Utr data member. More... | |
| bool | IsSetStrand_minus (void) const |
| TRUE implies opposite transcriptional orientation to to the reference sequence Check if a value has been assigned to Strand_minus data member. More... | |
| bool | CanGetStrand_minus (void) const |
| Check if it is safe to call GetStrand_minus method. More... | |
| void | ResetStrand_minus (void) |
| Reset Strand_minus data member. More... | |
| void | SetDefaultStrand_minus (void) |
| Assign default value to Strand_minus data member. More... | |
| TStrand_minus | GetStrand_minus (void) const |
| Get the Strand_minus member data. More... | |
| void | SetStrand_minus (TStrand_minus value) |
| Assign a value to Strand_minus data member. More... | |
| TStrand_minus & | SetStrand_minus (void) |
| Assign a value to Strand_minus data member. More... | |
| bool | IsSetFuzzy (void) const |
| TRUE implies HGVS subexpression of the form (base + offset), Check if a value has been assigned to Fuzzy data member. More... | |
| bool | CanGetFuzzy (void) const |
| Check if it is safe to call GetFuzzy method. More... | |
| void | ResetFuzzy (void) |
| Reset Fuzzy data member. More... | |
| void | SetDefaultFuzzy (void) |
| Assign default value to Fuzzy data member. More... | |
| TFuzzy | GetFuzzy (void) const |
| Get the Fuzzy member data. More... | |
| void | SetFuzzy (TFuzzy value) |
| Assign a value to Fuzzy data member. More... | |
| TFuzzy & | SetFuzzy (void) |
| Assign a value to Fuzzy data member. More... | |
| bool | IsSetFuzzy_offset (void) const |
| TRUE implies HGVS subexpression of the form base+(offset) Check if a value has been assigned to Fuzzy_offset data member. More... | |
| bool | CanGetFuzzy_offset (void) const |
| Check if it is safe to call GetFuzzy_offset method. More... | |
| void | ResetFuzzy_offset (void) |
| Reset Fuzzy_offset data member. More... | |
| void | SetDefaultFuzzy_offset (void) |
| Assign default value to Fuzzy_offset data member. More... | |
| TFuzzy_offset | GetFuzzy_offset (void) const |
| Get the Fuzzy_offset member data. More... | |
| void | SetFuzzy_offset (TFuzzy_offset value) |
| Assign a value to Fuzzy_offset data member. More... | |
| TFuzzy_offset & | SetFuzzy_offset (void) |
| Assign a value to Fuzzy_offset data member. More... | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CNtSite_Base | Tparent |
Private Member Functions | |
| CNtSite (const CNtSite &value) | |
| CNtSite & | operator= (const CNtSite &value) |
Additional Inherited Members | |
| Public Types inherited from CNtSite_Base | |
| enum class | E_memberIndex { e__allMandatory = 0 , e_seqid , e_seqtype , e_base , e_offset , e_utr , e_strand_minus , e_fuzzy , e_fuzzy_offset } |
| typedef string | TSeqid |
| typedef int | TSeqtype |
| typedef C_Base | TBase |
| typedef C_Offset | TOffset |
| typedef C_Utr | TUtr |
| typedef bool | TStrand_minus |
| typedef bool | TFuzzy |
| typedef bool | TFuzzy_offset |
| typedef Tparent::CMemberIndex< E_memberIndex, 9 > | TmemberIndex |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
CNtSite –.
Definition at line 65 of file NtSite.hpp.
The documentation for this class was generated from the following files:
- include/objects/varrep/NtSite.hpp
- src/objects/varrep/NtSite.cpp
