|
| | CSeqEdit_Cmd (void) |
| |
| | CSeqEdit_Cmd (const string &blobid) |
| |
| | ~CSeqEdit_Cmd (void) |
| |
| const string & | GetBlobId () const |
| |
| | CSeqEdit_Cmd_Base (void) |
| |
| virtual | ~CSeqEdit_Cmd_Base (void) |
| |
| | DECLARE_INTERNAL_TYPE_INFO () |
| |
| virtual void | Reset (void) |
| | Reset the whole object. More...
|
| |
| virtual void | ResetSelection (void) |
| | Reset the selection (set it to e_not_set). More...
|
| |
| E_Choice | Which (void) const |
| | Which variant is currently selected. More...
|
| |
| void | CheckSelected (E_Choice index) const |
| | Verify selection, throw exception if it differs from the expected. More...
|
| |
| void | ThrowInvalidSelection (E_Choice index) const |
| | Throw 'InvalidSelection' exception. More...
|
| |
| void | Select (E_Choice index, EResetVariant reset=eDoResetVariant) |
| | Select the requested variant if needed. More...
|
| |
| void | Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool) |
| | Select the requested variant if needed, allocating CObject variants from memory pool. More...
|
| |
| bool | IsAdd_id (void) const |
| | Check if variant Add_id is selected. More...
|
| |
| const TAdd_id & | GetAdd_id (void) const |
| | Get the variant data. More...
|
| |
| TAdd_id & | SetAdd_id (void) |
| | Select the variant. More...
|
| |
| void | SetAdd_id (TAdd_id &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsRemove_id (void) const |
| | Check if variant Remove_id is selected. More...
|
| |
| const TRemove_id & | GetRemove_id (void) const |
| | Get the variant data. More...
|
| |
| TRemove_id & | SetRemove_id (void) |
| | Select the variant. More...
|
| |
| void | SetRemove_id (TRemove_id &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsReset_ids (void) const |
| | Check if variant Reset_ids is selected. More...
|
| |
| const TReset_ids & | GetReset_ids (void) const |
| | Get the variant data. More...
|
| |
| TReset_ids & | SetReset_ids (void) |
| | Select the variant. More...
|
| |
| void | SetReset_ids (TReset_ids &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsChange_seqattr (void) const |
| | Check if variant Change_seqattr is selected. More...
|
| |
| const TChange_seqattr & | GetChange_seqattr (void) const |
| | Get the variant data. More...
|
| |
| TChange_seqattr & | SetChange_seqattr (void) |
| | Select the variant. More...
|
| |
| void | SetChange_seqattr (TChange_seqattr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsReset_seqattr (void) const |
| | Check if variant Reset_seqattr is selected. More...
|
| |
| const TReset_seqattr & | GetReset_seqattr (void) const |
| | Get the variant data. More...
|
| |
| TReset_seqattr & | SetReset_seqattr (void) |
| | Select the variant. More...
|
| |
| void | SetReset_seqattr (TReset_seqattr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsChange_setattr (void) const |
| | Check if variant Change_setattr is selected. More...
|
| |
| const TChange_setattr & | GetChange_setattr (void) const |
| | Get the variant data. More...
|
| |
| TChange_setattr & | SetChange_setattr (void) |
| | Select the variant. More...
|
| |
| void | SetChange_setattr (TChange_setattr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsReset_setattr (void) const |
| | Check if variant Reset_setattr is selected. More...
|
| |
| const TReset_setattr & | GetReset_setattr (void) const |
| | Get the variant data. More...
|
| |
| TReset_setattr & | SetReset_setattr (void) |
| | Select the variant. More...
|
| |
| void | SetReset_setattr (TReset_setattr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAdd_descr (void) const |
| | Check if variant Add_descr is selected. More...
|
| |
| const TAdd_descr & | GetAdd_descr (void) const |
| | Get the variant data. More...
|
| |
| TAdd_descr & | SetAdd_descr (void) |
| | Select the variant. More...
|
| |
| void | SetAdd_descr (TAdd_descr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsSet_descr (void) const |
| | Check if variant Set_descr is selected. More...
|
| |
| const TSet_descr & | GetSet_descr (void) const |
| | Get the variant data. More...
|
| |
| TSet_descr & | SetSet_descr (void) |
| | Select the variant. More...
|
| |
| void | SetSet_descr (TSet_descr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsReset_descr (void) const |
| | Check if variant Reset_descr is selected. More...
|
| |
| const TReset_descr & | GetReset_descr (void) const |
| | Get the variant data. More...
|
| |
| TReset_descr & | SetReset_descr (void) |
| | Select the variant. More...
|
| |
| void | SetReset_descr (TReset_descr &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAdd_desc (void) const |
| | Check if variant Add_desc is selected. More...
|
| |
| const TAdd_desc & | GetAdd_desc (void) const |
| | Get the variant data. More...
|
| |
| TAdd_desc & | SetAdd_desc (void) |
| | Select the variant. More...
|
| |
| void | SetAdd_desc (TAdd_desc &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsRemove_desc (void) const |
| | Check if variant Remove_desc is selected. More...
|
| |
| const TRemove_desc & | GetRemove_desc (void) const |
| | Get the variant data. More...
|
| |
| TRemove_desc & | SetRemove_desc (void) |
| | Select the variant. More...
|
| |
| void | SetRemove_desc (TRemove_desc &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAttach_seq (void) const |
| | Check if variant Attach_seq is selected. More...
|
| |
| const TAttach_seq & | GetAttach_seq (void) const |
| | Get the variant data. More...
|
| |
| TAttach_seq & | SetAttach_seq (void) |
| | Select the variant. More...
|
| |
| void | SetAttach_seq (TAttach_seq &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAttach_set (void) const |
| | Check if variant Attach_set is selected. More...
|
| |
| const TAttach_set & | GetAttach_set (void) const |
| | Get the variant data. More...
|
| |
| TAttach_set & | SetAttach_set (void) |
| | Select the variant. More...
|
| |
| void | SetAttach_set (TAttach_set &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsReset_seqentry (void) const |
| | Check if variant Reset_seqentry is selected. More...
|
| |
| const TReset_seqentry & | GetReset_seqentry (void) const |
| | Get the variant data. More...
|
| |
| TReset_seqentry & | SetReset_seqentry (void) |
| | Select the variant. More...
|
| |
| void | SetReset_seqentry (TReset_seqentry &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAttach_seqentry (void) const |
| | Check if variant Attach_seqentry is selected. More...
|
| |
| const TAttach_seqentry & | GetAttach_seqentry (void) const |
| | Get the variant data. More...
|
| |
| TAttach_seqentry & | SetAttach_seqentry (void) |
| | Select the variant. More...
|
| |
| void | SetAttach_seqentry (TAttach_seqentry &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsRemove_seqentry (void) const |
| | Check if variant Remove_seqentry is selected. More...
|
| |
| const TRemove_seqentry & | GetRemove_seqentry (void) const |
| | Get the variant data. More...
|
| |
| TRemove_seqentry & | SetRemove_seqentry (void) |
| | Select the variant. More...
|
| |
| void | SetRemove_seqentry (TRemove_seqentry &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAttach_annot (void) const |
| | Check if variant Attach_annot is selected. More...
|
| |
| const TAttach_annot & | GetAttach_annot (void) const |
| | Get the variant data. More...
|
| |
| TAttach_annot & | SetAttach_annot (void) |
| | Select the variant. More...
|
| |
| void | SetAttach_annot (TAttach_annot &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsRemove_annot (void) const |
| | Check if variant Remove_annot is selected. More...
|
| |
| const TRemove_annot & | GetRemove_annot (void) const |
| | Get the variant data. More...
|
| |
| TRemove_annot & | SetRemove_annot (void) |
| | Select the variant. More...
|
| |
| void | SetRemove_annot (TRemove_annot &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsAdd_annot (void) const |
| | Check if variant Add_annot is selected. More...
|
| |
| const TAdd_annot & | GetAdd_annot (void) const |
| | Get the variant data. More...
|
| |
| TAdd_annot & | SetAdd_annot (void) |
| | Select the variant. More...
|
| |
| void | SetAdd_annot (TAdd_annot &value) |
| | Select the variant and set its data. More...
|
| |
| bool | IsReplace_annot (void) const |
| | Check if variant Replace_annot is selected. More...
|
| |
| const TReplace_annot & | GetReplace_annot (void) const |
| | Get the variant data. More...
|
| |
| TReplace_annot & | SetReplace_annot (void) |
| | Select the variant. More...
|
| |
| void | SetReplace_annot (TReplace_annot &value) |
| | Select the variant and set its data. More...
|
| |
| | CSerialObject (void) |
| |
| virtual | ~CSerialObject (void) |
| |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| | Set object to copy of another one. More...
|
| |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| | Check if both objects contain the same values. More...
|
| |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| | Define method for dumping debug information. More...
|
| |
| void | ThrowUnassigned (TMemberIndex index) const |
| |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| |
| bool | HasNamespaceName (void) const |
| | Check if object data type has namespace name. More...
|
| |
| const string & | GetNamespaceName (void) const |
| | Get namespace name. More...
|
| |
| bool | HasNamespacePrefix (void) const |
| | Check if data type has namespace prefix. More...
|
| |
| const string & | GetNamespacePrefix (void) const |
| | Get namespace prefix. More...
|
| |
| | CObject (void) |
| | Constructor. More...
|
| |
| | CObject (const CObject &src) |
| | Copy constructor. More...
|
| |
| virtual | ~CObject (void) |
| | Destructor. More...
|
| |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| | Assignment operator. More...
|
| |
| bool | CanBeDeleted (void) const THROWS_NONE |
| | Check if object can be deleted. More...
|
| |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| | Check if object is allocated in memory pool (not system heap) More...
|
| |
| bool | Referenced (void) const THROWS_NONE |
| | Check if object is referenced. More...
|
| |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| | Check if object is referenced only once. More...
|
| |
| void | AddReference (void) const |
| | Add reference to object. More...
|
| |
| void | RemoveReference (void) const |
| | Remove reference to object. More...
|
| |
| void | ReleaseReference (void) const |
| | Remove reference without deleting object. More...
|
| |
| virtual void | DoNotDeleteThisObject (void) |
| | Mark this object as not allocated in heap – do not delete this object. More...
|
| |
| virtual void | DoDeleteThisObject (void) |
| | Mark this object as allocated in heap – object can be deleted. More...
|
| |
| void * | operator new (size_t size) |
| | Define new operator for memory allocation. More...
|
| |
| void * | operator new[] (size_t size) |
| | Define new[] operator for 'array' memory allocation. More...
|
| |
| void | operator delete (void *ptr) |
| | Define delete operator for memory deallocation. More...
|
| |
| void | operator delete[] (void *ptr) |
| | Define delete[] operator for memory deallocation. More...
|
| |
| void * | operator new (size_t size, void *place) |
| | Define new operator. More...
|
| |
| void | operator delete (void *ptr, void *place) |
| | Define delete operator. More...
|
| |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| | Define new operator using memory pool. More...
|
| |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| | Define delete operator. More...
|
| |
| | CDebugDumpable (void) |
| |
| virtual | ~CDebugDumpable (void) |
| |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| |
| void | DumpToConsole (void) const |
| |
|
| enum | E_Choice {
e_not_set = 0
, e_Add_id
, e_Remove_id
, e_Reset_ids
,
e_Change_seqattr
, e_Reset_seqattr
, e_Change_setattr
, e_Reset_setattr
,
e_Add_descr
, e_Set_descr
, e_Reset_descr
, e_Add_desc
,
e_Remove_desc
, e_Attach_seq
, e_Attach_set
, e_Reset_seqentry
,
e_Attach_seqentry
, e_Remove_seqentry
, e_Attach_annot
, e_Remove_annot
,
e_Add_annot
, e_Replace_annot
} |
| | Choice variants. More...
|
| |
| enum | E_ChoiceStopper { e_MaxChoice = 22
} |
| | Maximum+1 value of the choice variant enumerator. More...
|
| |
| typedef CSeqEdit_Cmd_AddId | TAdd_id |
| |
| typedef CSeqEdit_Cmd_RemoveId | TRemove_id |
| |
| typedef CSeqEdit_Cmd_ResetIds | TReset_ids |
| |
| typedef CSeqEdit_Cmd_ChangeSeqAttr | TChange_seqattr |
| |
| typedef CSeqEdit_Cmd_ResetSeqAttr | TReset_seqattr |
| |
| typedef CSeqEdit_Cmd_ChangeSetAttr | TChange_setattr |
| |
| typedef CSeqEdit_Cmd_ResetSetAttr | TReset_setattr |
| |
| typedef CSeqEdit_Cmd_AddDescr | TAdd_descr |
| |
| typedef CSeqEdit_Cmd_SetDescr | TSet_descr |
| |
| typedef CSeqEdit_Cmd_ResetDescr | TReset_descr |
| |
| typedef CSeqEdit_Cmd_AddDesc | TAdd_desc |
| |
| typedef CSeqEdit_Cmd_RemoveDesc | TRemove_desc |
| |
| typedef CSeqEdit_Cmd_AttachSeq | TAttach_seq |
| |
| typedef CSeqEdit_Cmd_AttachSet | TAttach_set |
| |
| typedef CSeqEdit_Cmd_ResetSeqEntry | TReset_seqentry |
| |
| typedef CSeqEdit_Cmd_AttachSeqEntry | TAttach_seqentry |
| |
| typedef CSeqEdit_Cmd_RemoveSeqEntry | TRemove_seqentry |
| |
| typedef CSeqEdit_Cmd_AttachAnnot | TAttach_annot |
| |
| typedef CSeqEdit_Cmd_RemoveAnnot | TRemove_annot |
| |
| typedef CSeqEdit_Cmd_AddAnnot | TAdd_annot |
| |
| typedef CSeqEdit_Cmd_ReplaceAnnot | TReplace_annot |
| |
| enum | EAllocFillMode { eAllocFillNone = 1
, eAllocFillZero
, eAllocFillPattern
} |
| | Control filling of newly allocated memory. More...
|
| |
| typedef CObjectCounterLocker | TLockerType |
| | Default locker type for CRef. More...
|
| |
| typedef atomic< Uint8 > | TCounter |
| | Counter type is CAtomiCounter. More...
|
| |
| typedef Uint8 | TCount |
| | Alias for value type of counter. More...
|
| |
| static string | SelectionName (E_Choice index) |
| | Retrieve selection name (for diagnostic purposes). More...
|
| |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| |
| static string | UnassignedString (void) |
| |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| |
| static char | UnassignedByte (void) |
| |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| | Define method to throw null pointer exception. More...
|
| |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| |
| static EAllocFillMode | GetAllocFillMode (void) |
| |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| |
| static void | SetAllocFillMode (const string &value) |
| | Set mode from configuration parameter value. More...
|
| |
| static void | EnableDebugDump (bool on) |
| |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| |
| static const char | ms_UnassignedByte = char(0xcd) |
| |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| | Define possible object states. More...
|
| |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| | Heap signature was found. More...
|
| |
| static const TCount | eCounterBitsPlaceMask |
| | Mask for 'in heap' state flags. More...
|
| |
| static const int | eCounterStep = 1 << 2 |
| | Skip over the "in heap" bits. More...
|
| |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| | Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
|
| |
| static const TCount | eCounterStateMask |
| | Valid object, and object in heap. More...
|
| |
| virtual void | DeleteThis (void) |
| | Virtual method "deleting" this object. More...
|
| |