Search Toolkit Book for CMolInfo
#include <objects/seq/MolInfo.hpp>
Inheritance diagram for CMolInfo:
Collaboration diagram for CMolInfo:
Public Member Functions | |
| CMolInfo (void) | |
| ~CMolInfo (void) | |
| void | GetLabel (string *label) const |
| Public Member Functions inherited from CMolInfo_Base | |
| CMolInfo_Base (void) | |
| virtual | ~CMolInfo_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetBiomol (void) const |
| Check if a value has been assigned to Biomol data member. More... | |
| bool | CanGetBiomol (void) const |
| Check if it is safe to call GetBiomol method. More... | |
| void | ResetBiomol (void) |
| Reset Biomol data member. More... | |
| void | SetDefaultBiomol (void) |
| Assign default value to Biomol data member. More... | |
| TBiomol | GetBiomol (void) const |
| Get the Biomol member data. More... | |
| void | SetBiomol (TBiomol value) |
| Assign a value to Biomol data member. More... | |
| TBiomol & | SetBiomol (void) |
| Assign a value to Biomol data member. More... | |
| bool | IsSetTech (void) const |
| Check if a value has been assigned to Tech data member. More... | |
| bool | CanGetTech (void) const |
| Check if it is safe to call GetTech method. More... | |
| void | ResetTech (void) |
| Reset Tech data member. More... | |
| void | SetDefaultTech (void) |
| Assign default value to Tech data member. More... | |
| TTech | GetTech (void) const |
| Get the Tech member data. More... | |
| void | SetTech (TTech value) |
| Assign a value to Tech data member. More... | |
| TTech & | SetTech (void) |
| Assign a value to Tech data member. More... | |
| bool | IsSetTechexp (void) const |
| explanation if tech not enough More... | |
| bool | CanGetTechexp (void) const |
| Check if it is safe to call GetTechexp method. More... | |
| void | ResetTechexp (void) |
| Reset Techexp data member. More... | |
| const TTechexp & | GetTechexp (void) const |
| Get the Techexp member data. More... | |
| void | SetTechexp (const TTechexp &value) |
| Assign a value to Techexp data member. More... | |
| void | SetTechexp (TTechexp &&value) |
| TTechexp & | SetTechexp (void) |
| Assign a value to Techexp data member. More... | |
| bool | IsSetCompleteness (void) const |
| Check if a value has been assigned to Completeness data member. More... | |
| bool | CanGetCompleteness (void) const |
| Check if it is safe to call GetCompleteness method. More... | |
| void | ResetCompleteness (void) |
| Reset Completeness data member. More... | |
| void | SetDefaultCompleteness (void) |
| Assign default value to Completeness data member. More... | |
| TCompleteness | GetCompleteness (void) const |
| Get the Completeness member data. More... | |
| void | SetCompleteness (TCompleteness value) |
| Assign a value to Completeness data member. More... | |
| TCompleteness & | SetCompleteness (void) |
| Assign a value to Completeness data member. More... | |
| bool | IsSetGbmoltype (void) const |
| identifies particular ncRNA Check if a value has been assigned to Gbmoltype data member. More... | |
| bool | CanGetGbmoltype (void) const |
| Check if it is safe to call GetGbmoltype method. More... | |
| void | ResetGbmoltype (void) |
| Reset Gbmoltype data member. More... | |
| const TGbmoltype & | GetGbmoltype (void) const |
| Get the Gbmoltype member data. More... | |
| void | SetGbmoltype (const TGbmoltype &value) |
| Assign a value to Gbmoltype data member. More... | |
| void | SetGbmoltype (TGbmoltype &&value) |
| TGbmoltype & | SetGbmoltype (void) |
| Assign a value to Gbmoltype data member. More... | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Static Public Member Functions | |
| static string | GetBiomolName (CMolInfo::TBiomol biomol) |
| Static Public Member Functions inherited from CMolInfo_Base | |
| static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() | EBiomol (void) |
| Access to EBiomol's attributes (values, names) as defined in spec. More... | |
| static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() | ETech (void) |
| Access to ETech's attributes (values, names) as defined in spec. More... | |
| static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() | ECompleteness (void) |
| Access to ECompleteness's attributes (values, names) as defined in spec. More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
Private Types | |
| typedef CMolInfo_Base | Tparent |
Private Member Functions | |
| CMolInfo (const CMolInfo &value) | |
| CMolInfo & | operator= (const CMolInfo &value) |
Detailed Description
Definition at line 50 of file MolInfo.hpp.
Member Typedef Documentation
◆ Tparent
|
private |
Definition at line 52 of file MolInfo.hpp.
Constructor & Destructor Documentation
◆ CMolInfo() [1/2]
|
inline |
Definition at line 77 of file MolInfo.hpp.
◆ ~CMolInfo()
| CMolInfo::~CMolInfo | ( | void | ) |
Definition at line 52 of file MolInfo.cpp.
◆ CMolInfo() [2/2]
Member Function Documentation
◆ GetBiomolName()
|
static |
Definition at line 116 of file MolInfo.cpp.
Referenced by CAutoDef::x_GetOneNonFeatureClause().
◆ GetLabel()
| void CMolInfo::GetLabel | ( | string * | label | ) | const |
Definition at line 56 of file MolInfo.cpp.
References CEnumeratedTypeValues::FindName(), CMolInfo_Base::GetBiomol(), CMolInfo_Base::GetCompleteness(), CMolInfo_Base::GetTech(), CMolInfo_Base::GetTechexp(), CMolInfo_Base::IsSetBiomol(), CMolInfo_Base::IsSetCompleteness(), CMolInfo_Base::IsSetTech(), CMolInfo_Base::IsSetTechexp(), and label.
Referenced by CDiscrepancyObject::GetTextObjectDescription(), GetTextObjectDescription(), and s_GetContentLabel().
◆ operator=()
The documentation for this class was generated from the following files:
- include/objects/seq/MolInfo.hpp
- src/objects/seq/MolInfo.cpp
