Search Toolkit Book for CFeatDef
#include <objects/featdef/FeatDef.hpp>
Inheritance diagram for CFeatDef:
Collaboration diagram for CFeatDef:
Public Member Functions | |
| CFeatDef (void) | |
| ~CFeatDef (void) | |
| Public Member Functions inherited from CFeatDef_Base | |
| CFeatDef_Base (void) | |
| virtual | ~CFeatDef_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetTypelabel (void) const |
| short label for type eg "CDS" Check if a value has been assigned to Typelabel data member. More... | |
| bool | CanGetTypelabel (void) const |
| Check if it is safe to call GetTypelabel method. More... | |
| void | ResetTypelabel (void) |
| Reset Typelabel data member. More... | |
| const TTypelabel & | GetTypelabel (void) const |
| Get the Typelabel member data. More... | |
| void | SetTypelabel (const TTypelabel &value) |
| Assign a value to Typelabel data member. More... | |
| void | SetTypelabel (TTypelabel &&value) |
| TTypelabel & | SetTypelabel (void) |
| Assign a value to Typelabel data member. More... | |
| bool | IsSetMenulabel (void) const |
| label for a menu eg "Coding Region" Check if a value has been assigned to Menulabel data member. More... | |
| bool | CanGetMenulabel (void) const |
| Check if it is safe to call GetMenulabel method. More... | |
| void | ResetMenulabel (void) |
| Reset Menulabel data member. More... | |
| const TMenulabel & | GetMenulabel (void) const |
| Get the Menulabel member data. More... | |
| void | SetMenulabel (const TMenulabel &value) |
| Assign a value to Menulabel data member. More... | |
| void | SetMenulabel (TMenulabel &&value) |
| TMenulabel & | SetMenulabel (void) |
| Assign a value to Menulabel data member. More... | |
| bool | IsSetFeatdef_key (void) const |
| unique for this feature definition Check if a value has been assigned to Featdef_key data member. More... | |
| bool | CanGetFeatdef_key (void) const |
| Check if it is safe to call GetFeatdef_key method. More... | |
| void | ResetFeatdef_key (void) |
| Reset Featdef_key data member. More... | |
| TFeatdef_key | GetFeatdef_key (void) const |
| Get the Featdef_key member data. More... | |
| void | SetFeatdef_key (TFeatdef_key value) |
| Assign a value to Featdef_key data member. More... | |
| TFeatdef_key & | SetFeatdef_key (void) |
| Assign a value to Featdef_key data member. More... | |
| bool | IsSetSeqfeat_key (void) const |
| SeqFeat.data.choice from objfeat.h Check if a value has been assigned to Seqfeat_key data member. More... | |
| bool | CanGetSeqfeat_key (void) const |
| Check if it is safe to call GetSeqfeat_key method. More... | |
| void | ResetSeqfeat_key (void) |
| Reset Seqfeat_key data member. More... | |
| TSeqfeat_key | GetSeqfeat_key (void) const |
| Get the Seqfeat_key member data. More... | |
| void | SetSeqfeat_key (TSeqfeat_key value) |
| Assign a value to Seqfeat_key data member. More... | |
| TSeqfeat_key & | SetSeqfeat_key (void) |
| Assign a value to Seqfeat_key data member. More... | |
| bool | IsSetEntrygroup (void) const |
| Group for data entry Check if a value has been assigned to Entrygroup data member. More... | |
| bool | CanGetEntrygroup (void) const |
| Check if it is safe to call GetEntrygroup method. More... | |
| void | ResetEntrygroup (void) |
| Reset Entrygroup data member. More... | |
| TEntrygroup | GetEntrygroup (void) const |
| Get the Entrygroup member data. More... | |
| void | SetEntrygroup (TEntrygroup value) |
| Assign a value to Entrygroup data member. More... | |
| TEntrygroup & | SetEntrygroup (void) |
| Assign a value to Entrygroup data member. More... | |
| bool | IsSetDisplaygroup (void) const |
| Group for data display Check if a value has been assigned to Displaygroup data member. More... | |
| bool | CanGetDisplaygroup (void) const |
| Check if it is safe to call GetDisplaygroup method. More... | |
| void | ResetDisplaygroup (void) |
| Reset Displaygroup data member. More... | |
| TDisplaygroup | GetDisplaygroup (void) const |
| Get the Displaygroup member data. More... | |
| void | SetDisplaygroup (TDisplaygroup value) |
| Assign a value to Displaygroup data member. More... | |
| TDisplaygroup & | SetDisplaygroup (void) |
| Assign a value to Displaygroup data member. More... | |
| bool | IsSetMolgroup (void) const |
| Type of Molecule used for Check if a value has been assigned to Molgroup data member. More... | |
| bool | CanGetMolgroup (void) const |
| Check if it is safe to call GetMolgroup method. More... | |
| void | ResetMolgroup (void) |
| Reset Molgroup data member. More... | |
| TMolgroup | GetMolgroup (void) const |
| Get the Molgroup member data. More... | |
| void | SetMolgroup (TMolgroup value) |
| Assign a value to Molgroup data member. More... | |
| TMolgroup & | SetMolgroup (void) |
| Assign a value to Molgroup data member. More... | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CFeatDef_Base | Tparent |
Private Member Functions | |
| CFeatDef (const CFeatDef &value) | |
| CFeatDef & | operator= (const CFeatDef &value) |
Additional Inherited Members | |
| Public Types inherited from CFeatDef_Base | |
| enum class | E_memberIndex { e__allMandatory = 0 , e_typelabel , e_menulabel , e_featdef_key , e_seqfeat_key , e_entrygroup , e_displaygroup , e_molgroup } |
| typedef string | TTypelabel |
| typedef string | TMenulabel |
| typedef int | TFeatdef_key |
| typedef int | TSeqfeat_key |
| typedef int | TEntrygroup |
| typedef int | TDisplaygroup |
| typedef EFeatMolType | TMolgroup |
| typedef Tparent::CMemberIndex< E_memberIndex, 8 > | TmemberIndex |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
CFeatDef –.
Definition at line 65 of file FeatDef.hpp.
The documentation for this class was generated from the following files:
- include/objects/featdef/FeatDef.hpp
- src/objects/featdef/FeatDef.cpp
