Search Toolkit Book for CModelEvidenceSupport
CModelEvidenceSupport –. More...
#include <objects/seqfeat/ModelEvidenceSupport.hpp>
Inheritance diagram for CModelEvidenceSupport:
Collaboration diagram for CModelEvidenceSupport:
Public Member Functions | |
| CModelEvidenceSupport (void) | |
| ~CModelEvidenceSupport (void) | |
| Public Member Functions inherited from CModelEvidenceSupport_Base | |
| CModelEvidenceSupport_Base (void) | |
| virtual | ~CModelEvidenceSupport_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetMethod (void) const |
| Check if a value has been assigned to Method data member. More... | |
| bool | CanGetMethod (void) const |
| Check if it is safe to call GetMethod method. More... | |
| void | ResetMethod (void) |
| Reset Method data member. More... | |
| const TMethod & | GetMethod (void) const |
| Get the Method member data. More... | |
| void | SetMethod (const TMethod &value) |
| Assign a value to Method data member. More... | |
| void | SetMethod (TMethod &&value) |
| TMethod & | SetMethod (void) |
| Assign a value to Method data member. More... | |
| bool | IsSetMrna (void) const |
| Check if a value has been assigned to Mrna data member. More... | |
| bool | CanGetMrna (void) const |
| Check if it is safe to call GetMrna method. More... | |
| void | ResetMrna (void) |
| Reset Mrna data member. More... | |
| const TMrna & | GetMrna (void) const |
| Get the Mrna member data. More... | |
| TMrna & | SetMrna (void) |
| Assign a value to Mrna data member. More... | |
| bool | IsSetEst (void) const |
| Check if a value has been assigned to Est data member. More... | |
| bool | CanGetEst (void) const |
| Check if it is safe to call GetEst method. More... | |
| void | ResetEst (void) |
| Reset Est data member. More... | |
| const TEst & | GetEst (void) const |
| Get the Est member data. More... | |
| TEst & | SetEst (void) |
| Assign a value to Est data member. More... | |
| bool | IsSetProtein (void) const |
| Check if a value has been assigned to Protein data member. More... | |
| bool | CanGetProtein (void) const |
| Check if it is safe to call GetProtein method. More... | |
| void | ResetProtein (void) |
| Reset Protein data member. More... | |
| const TProtein & | GetProtein (void) const |
| Get the Protein member data. More... | |
| TProtein & | SetProtein (void) |
| Assign a value to Protein data member. More... | |
| bool | IsSetIdentification (void) const |
| Check if a value has been assigned to Identification data member. More... | |
| bool | CanGetIdentification (void) const |
| Check if it is safe to call GetIdentification method. More... | |
| void | ResetIdentification (void) |
| Reset Identification data member. More... | |
| const TIdentification & | GetIdentification (void) const |
| Get the Identification member data. More... | |
| void | SetIdentification (TIdentification &value) |
| Assign a value to Identification data member. More... | |
| TIdentification & | SetIdentification (void) |
| Assign a value to Identification data member. More... | |
| bool | IsSetDbxref (void) const |
| Check if a value has been assigned to Dbxref data member. More... | |
| bool | CanGetDbxref (void) const |
| Check if it is safe to call GetDbxref method. More... | |
| void | ResetDbxref (void) |
| Reset Dbxref data member. More... | |
| const TDbxref & | GetDbxref (void) const |
| Get the Dbxref member data. More... | |
| TDbxref & | SetDbxref (void) |
| Assign a value to Dbxref data member. More... | |
| bool | IsSetExon_count (void) const |
| Check if a value has been assigned to Exon_count data member. More... | |
| bool | CanGetExon_count (void) const |
| Check if it is safe to call GetExon_count method. More... | |
| void | ResetExon_count (void) |
| Reset Exon_count data member. More... | |
| TExon_count | GetExon_count (void) const |
| Get the Exon_count member data. More... | |
| void | SetExon_count (TExon_count value) |
| Assign a value to Exon_count data member. More... | |
| TExon_count & | SetExon_count (void) |
| Assign a value to Exon_count data member. More... | |
| bool | IsSetExon_length (void) const |
| Check if a value has been assigned to Exon_length data member. More... | |
| bool | CanGetExon_length (void) const |
| Check if it is safe to call GetExon_length method. More... | |
| void | ResetExon_length (void) |
| Reset Exon_length data member. More... | |
| TExon_length | GetExon_length (void) const |
| Get the Exon_length member data. More... | |
| void | SetExon_length (TExon_length value) |
| Assign a value to Exon_length data member. More... | |
| TExon_length & | SetExon_length (void) |
| Assign a value to Exon_length data member. More... | |
| bool | IsSetFull_length (void) const |
| Check if a value has been assigned to Full_length data member. More... | |
| bool | CanGetFull_length (void) const |
| Check if it is safe to call GetFull_length method. More... | |
| void | ResetFull_length (void) |
| Reset Full_length data member. More... | |
| void | SetDefaultFull_length (void) |
| Assign default value to Full_length data member. More... | |
| TFull_length | GetFull_length (void) const |
| Get the Full_length member data. More... | |
| void | SetFull_length (TFull_length value) |
| Assign a value to Full_length data member. More... | |
| TFull_length & | SetFull_length (void) |
| Assign a value to Full_length data member. More... | |
| bool | IsSetSupports_all_exon_combo (void) const |
| Check if a value has been assigned to Supports_all_exon_combo data member. More... | |
| bool | CanGetSupports_all_exon_combo (void) const |
| Check if it is safe to call GetSupports_all_exon_combo method. More... | |
| void | ResetSupports_all_exon_combo (void) |
| Reset Supports_all_exon_combo data member. More... | |
| void | SetDefaultSupports_all_exon_combo (void) |
| Assign default value to Supports_all_exon_combo data member. More... | |
| TSupports_all_exon_combo | GetSupports_all_exon_combo (void) const |
| Get the Supports_all_exon_combo member data. More... | |
| void | SetSupports_all_exon_combo (TSupports_all_exon_combo value) |
| Assign a value to Supports_all_exon_combo data member. More... | |
| TSupports_all_exon_combo & | SetSupports_all_exon_combo (void) |
| Assign a value to Supports_all_exon_combo data member. More... | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CModelEvidenceSupport_Base | Tparent |
Private Member Functions | |
| CModelEvidenceSupport (const CModelEvidenceSupport &value) | |
| CModelEvidenceSupport & | operator= (const CModelEvidenceSupport &value) |
Additional Inherited Members | |
| Public Types inherited from CModelEvidenceSupport_Base | |
| enum class | E_memberIndex { e__allMandatory = 0 , e_method , e_mrna , e_est , e_protein , e_identification , e_dbxref , e_exon_count , e_exon_length , e_full_length , e_supports_all_exon_combo } |
| typedef string | TMethod |
| typedef list< CRef< CModelEvidenceItem > > | TMrna |
| typedef list< CRef< CModelEvidenceItem > > | TEst |
| typedef list< CRef< CModelEvidenceItem > > | TProtein |
| typedef CSeq_id | TIdentification |
| typedef list< CRef< CDbtag > > | TDbxref |
| typedef int | TExon_count |
| typedef int | TExon_length |
| typedef bool | TFull_length |
| typedef bool | TSupports_all_exon_combo |
| typedef Tparent::CMemberIndex< E_memberIndex, 11 > | TmemberIndex |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
Definition at line 65 of file ModelEvidenceSupport.hpp.
The documentation for this class was generated from the following files:
- include/objects/seqfeat/ModelEvidenceSupport.hpp
- src/objects/seqfeat/ModelEvidenceSupport.cpp
