#include <objects/seqtable/BVector_data.hpp>

Inheritance diagram for CBVector_data:

Collaboration diagram for CBVector_data:

Public Member Functions
	CBVector_data (void)

	~CBVector_data (void)

void	Reset (void)
	Reset the whole object. More...

void	SetSize (const TSize &size)

void	SetBitVector (const bm::bvector<> *bv)

const bm::bvector &	GetBitVector (void) const

void	ResetBitVector (void)

Public Member Functions inherited from CBVector_data_Base
	CBVector_data_Base (void)

virtual	~CBVector_data_Base (void)

	DECLARE_INTERNAL_TYPE_INFO ()

bool	IsSetSize (void) const
	Check if a value has been assigned to Size data member. More...

bool	CanGetSize (void) const
	Check if it is safe to call GetSize method. More...

void	ResetSize (void)
	Reset Size data member. More...

TSize	GetSize (void) const
	Get the Size member data. More...

void	SetSize (TSize value)
	Assign a value to Size data member. More...

TSize &	SetSize (void)
	Assign a value to Size data member. More...

bool	IsSetData (void) const
	Check if a value has been assigned to Data data member. More...

bool	CanGetData (void) const
	Check if it is safe to call GetData method. More...

void	ResetData (void)
	Reset Data data member. More...

const TData &	GetData (void) const
	Get the Data member data. More...

TData &	SetData (void)
	Assign a value to Data data member. More...

Public Member Functions inherited from CSerialObject
	CSerialObject (void)

virtual	~CSerialObject (void)

virtual const CTypeInfo *	GetThisTypeInfo (void) const =0

virtual void	Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
	Set object to copy of another one. More...

virtual bool	Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
	Check if both objects contain the same values. More...

virtual void	DebugDump (CDebugDumpContext ddc, unsigned int depth) const
	Define method for dumping debug information. More...

void	ThrowUnassigned (TMemberIndex index) const

void	ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const

bool	HasNamespaceName (void) const
	Check if object data type has namespace name. More...

const string &	GetNamespaceName (void) const
	Get namespace name. More...

bool	HasNamespacePrefix (void) const
	Check if data type has namespace prefix. More...

const string &	GetNamespacePrefix (void) const
	Get namespace prefix. More...

Public Member Functions inherited from CObject
	CObject (void)
	Constructor. More...

	CObject (const CObject &src)
	Copy constructor. More...

virtual	~CObject (void)
	Destructor. More...

CObject &	operator= (const CObject &src) THROWS_NONE
	Assignment operator. More...

bool	CanBeDeleted (void) const THROWS_NONE
	Check if object can be deleted. More...

bool	IsAllocatedInPool (void) const THROWS_NONE
	Check if object is allocated in memory pool (not system heap) More...

bool	Referenced (void) const THROWS_NONE
	Check if object is referenced. More...

bool	ReferencedOnlyOnce (void) const THROWS_NONE
	Check if object is referenced only once. More...

void	AddReference (void) const
	Add reference to object. More...

void	RemoveReference (void) const
	Remove reference to object. More...

void	ReleaseReference (void) const
	Remove reference without deleting object. More...

virtual void	DoNotDeleteThisObject (void)
	Mark this object as not allocated in heap – do not delete this object. More...

virtual void	DoDeleteThisObject (void)
	Mark this object as allocated in heap – object can be deleted. More...

void *	operator new (size_t size)
	Define new operator for memory allocation. More...

void *	operator new[] (size_t size)
	Define new[] operator for 'array' memory allocation. More...

void	operator delete (void *ptr)
	Define delete operator for memory deallocation. More...

void	operator delete[] (void *ptr)
	Define delete[] operator for memory deallocation. More...

void *	operator new (size_t size, void *place)
	Define new operator. More...

void	operator delete (void ptr, void place)
	Define delete operator. More...

void *	operator new (size_t size, CObjectMemoryPool *place)
	Define new operator using memory pool. More...

void	operator delete (void ptr, CObjectMemoryPool place)
	Define delete operator. More...

Public Member Functions inherited from CDebugDumpable
	CDebugDumpable (void)

virtual	~CDebugDumpable (void)

void	DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const

void	DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const

void	DumpToConsole (void) const

Protected Member Functions
void	x_CreateBitVector (void) const

Protected Member Functions inherited from CObject
virtual void	DeleteThis (void)
	Virtual method "deleting" this object. More...

Protected Attributes
AutoPtr< const bm::bvector<> >	m_BitVector

Private Types
typedef CBVector_data_Base	Tparent

Private Member Functions
	CBVector_data (const CBVector_data &value)

CBVector_data &	operator= (const CBVector_data &value)

Additional Inherited Members
Public Types inherited from CBVector_data_Base
enum class	E_memberIndex { e__allMandatory = 0 , e_size , e_data }

typedef unsigned	TSize

typedef vector< char >	TData

typedef Tparent::CMemberIndex< E_memberIndex, 3 >	TmemberIndex

Public Types inherited from CObject
enum	EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
	Control filling of newly allocated memory. More...

typedef CObjectCounterLocker	TLockerType
	Default locker type for CRef. More...

typedef atomic< Uint8 >	TCounter
	Counter type is CAtomiCounter. More...

typedef Uint8	TCount
	Alias for value type of counter. More...

Static Public Member Functions inherited from CSerialObject
static void	SetVerifyDataThread (ESerialVerifyData verify)

static void	SetVerifyDataGlobal (ESerialVerifyData verify)

static string	UnassignedString (void)

static CStringUTF8	UnassignedStringUTF8 (void)

static char	UnassignedByte (void)

Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (void)
	Define method to throw null pointer exception. More...

static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (const type_info &type)

static EAllocFillMode	GetAllocFillMode (void)

static void	SetAllocFillMode (EAllocFillMode mode)

static void	SetAllocFillMode (const string &value)
	Set mode from configuration parameter value. More...

Static Public Member Functions inherited from CDebugDumpable
static void	EnableDebugDump (bool on)

Static Public Attributes inherited from CSerialObject
static const char *	ms_UnassignedStr = "<unassigned>"

static const char	ms_UnassignedByte = char(0xcd)

Static Public Attributes inherited from CObject
static const TCount	eCounterBitsCanBeDeleted = 1 << 0
	Define possible object states. More...

static const TCount	eCounterBitsInPlainHeap = 1 << 1
	Heap signature was found. More...

static const TCount	eCounterBitsPlaceMask
	Mask for 'in heap' state flags. More...

static const int	eCounterStep = 1 << 2
	Skip over the "in heap" bits. More...

static const TCount	eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
	Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...

static const TCount	eCounterStateMask
	Valid object, and object in heap. More...

Detailed Description

Definition at line 55 of file BVector_data.hpp.

Member Typedef Documentation

◆ Tparent

typedef CBVector_data_Base CBVector_data::Tparent

private

Definition at line 57 of file BVector_data.hpp.

Constructor & Destructor Documentation

◆ CBVector_data() [1/2]

CBVector_data::CBVector_data ( void )

inline

Definition at line 101 of file BVector_data.hpp.

◆ ~CBVector_data()

CBVector_data::~CBVector_data ( void )

Definition at line 52 of file BVector_data.cpp.

◆ CBVector_data() [2/2]

CBVector_data::CBVector_data ( const CBVector_data & value )

private

Member Function Documentation

◆ GetBitVector()

const bm::bvector& CBVector_data::GetBitVector ( void ) const

inline

Definition at line 75 of file BVector_data.hpp.

References m_BitVector, and x_CreateBitVector().

Referenced by CSeqTable_multi_data::ChangeToBit(), CSeqTable_sparse_index::GetIndexAt(), CSeqTable_sparse_index::HasValueAt(), CSeqTable_sparse_index::x_GetFirstRowWithValue(), and CSeqTable_sparse_index::x_GetNextRowWithValue().

◆ operator=()

CBVector_data& CBVector_data::operator= ( const CBVector_data & value )

private

◆ Reset()

void CBVector_data::Reset ( void )

virtual

Reset the whole object.

Reimplemented from CBVector_data_Base.

Definition at line 57 of file BVector_data.cpp.

References m_BitVector, AutoPtr< X, Del >::reset(), and CBVector_data_Base::Reset().

Referenced by SetBitVector().

◆ ResetBitVector()

void CBVector_data::ResetBitVector ( void )

Definition at line 64 of file BVector_data.cpp.

References m_BitVector, and AutoPtr< X, Del >::reset().

◆ SetBitVector()

void CBVector_data::SetBitVector ( const bm::bvector<> * bv )

Definition at line 85 of file BVector_data.cpp.

References bm::aligned_free(), bm::aligned_new_malloc(), arr, bm::bvector< Alloc >::calc_stat(), m_BitVector, bm::bv_statistics::max_serialize_mem, AutoPtr< X, Del >::reset(), Reset(), bm::serialize(), bm::set_block_alloc_size, CBVector_data_Base::SetData(), CBVector_data_Base::SetSize(), ncbi::grid::netcache::search::fields::size, and bm::bvector< Alloc >::size().

Referenced by CSeqTable_multi_data::ChangeToBit_bvector(), and CSeqTable_sparse_index::ChangeToBit_set_bvector().

◆ SetSize()

void CBVector_data::SetSize ( const TSize & size )

◆ x_CreateBitVector()

void CBVector_data::x_CreateBitVector ( void ) const

protected

Definition at line 73 of file BVector_data.cpp.

References bm::deserialize(), CBVector_data_Base::GetData(), CBVector_data_Base::GetSize(), m_BitVector, AutoPtr< X, Del >::release(), and AutoPtr< X, Del >::reset().

Referenced by GetBitVector().

Member Data Documentation

◆ m_BitVector

AutoPtr<const bm::bvector<> > CBVector_data::m_BitVector

mutableprotected

Definition at line 88 of file BVector_data.hpp.

Referenced by GetBitVector(), Reset(), ResetBitVector(), SetBitVector(), and x_CreateBitVector().

The documentation for this class was generated from the following files:

include/objects/seqtable/BVector_data.hpp
src/objects/seqtable/BVector_data.cpp

Public Member Functions

Protected Member Functions

Protected Attributes

Private Types

Private Member Functions

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ Tparent

Constructor & Destructor Documentation

◆ CBVector_data() [1/2]

◆ ~CBVector_data()

◆ CBVector_data() [2/2]

Member Function Documentation

◆ GetBitVector()

◆ operator=()

◆ Reset()

◆ ResetBitVector()

◆ SetBitVector()

◆ SetSize()

◆ x_CreateBitVector()

Member Data Documentation

◆ m_BitVector