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73 commits

Author SHA1 Message Date
Emma Nechamkin
8c255f0e9a
Adding HOLC indicator (#1579)
Added HOLC indicator (Historic Redlining Score) from NCRC work; included 3.25 cutoff and low income as part of the housing burden category.
2022-05-12 12:07:08 -04:00
Emma Nechamkin
4ae5ec512f
Imputing income using geographic neighbors (#1559)
Imputes income field with a light refactor. Needs more refactor and more tests (I spotchecked). Next ticket will check and address but a lot of "narwhal" architecture is here.
2022-04-27 15:59:10 -04:00
Jorge Escobar
7b05ee9c76
S3 Parallel Upload and Deletions (#1410)
* installation step

* trigger action

* installing to home dir

* dry-run

* pyenv

* py 2.8

* trying s4cmd

* removing pyenv

* poetry s4cmd

* num-threads

* public read

* poetry cache

* s4cmd all around

* poetry cache

* poetry cache

* install poetry packages

* poetry echo

* let's do this

* s4cmd install on run

* s4cmd

* ad aws back

* add aws back

* testing census api key and poetry caching

* census api key

* census api

* census api key #3

* 250

* poetry update

* poetry change

* check census api key

* force flag

* update score gen and tilefy; remove cached fips

* small gdal update

* invalidation

* missing cache ids
2022-03-17 23:19:23 -04:00
Emma Nechamkin
e7c7c0abeb
Updating higher education to be reversed (#1387)
Summary In this PR, we create a new variable so that the % college students is expressed as % not college students. This means that the front end can display % not college students.

Includes old variables so that this will not break fe.
2022-03-15 16:43:32 -04:00
Emma Nechamkin
aea49cbb5a
Cleaning up quick code (#1349)
Did some quick, mostly cosmetic changes and updates to the quick launch changes. This mostly entailed changing strings to constants and cleaning up some code to make it neater.

Changes -- PR AMI, updating ag loss, and dropping pr from some threshold counts.
2022-03-02 16:50:04 -05:00
Emma Nechamkin
f9be97d8c8
This is a quick addition to include PR AMI. To be revised in the "clean up code" pr 2022-03-01 16:31:38 -05:00
Emma Nechamkin
1b76a68838
FEMA data check (#1270)
we wanted to implement a slightly different FEMA AG LOSS indicator. Here, we take the 90th percentile only of tracts that have agvalue, and then we also floor the denominator of the rate calculation (loss/total value) at $408k
2022-02-17 16:53:04 -05:00
Lucas Merrill Brown
a0d6e55f0a
Run ETL processes in parallel (#1253)
* WIP on parallelizing

* switching to get_tmp_path for nri

* switching to get_tmp_path everywhere necessary

* fixing linter errors

* moving heavy ETLs to front of line

* add hold

* moving cdc places up

* removing unnecessary print

* moving h&t up

* adding parallel to geo post

* better census labels

* switching to concurrent futures

* fixing output
2022-02-11 14:04:53 -05:00
Lucas Merrill Brown
43e005cc10
Issue 1075: Add refactored ETL tests to NRI (#1088)
* Adds a substantially refactored ETL test to the National Risk Index, to be used as a model for other tests
2022-02-08 19:05:32 -05:00
Emma Nechamkin
6a00b29f5d
Adding VA and CO ETL from mapping for environmental justice (#1177)
Adding the mapping for environmental justice data, which contains information about VA and CO, to the ETL pipeline.
2022-02-04 10:00:41 -05:00
Jorge Escobar
403a490985
Esfoobar usds/488 generate score per commit pr (#1211)
* Score run on every commit to data PR

* testing score run

* source aws
2022-01-31 16:07:21 -05:00
Lucas Merrill Brown
18f299c5f8
Issue 1141: Definition M (#1151) 2022-01-18 14:56:55 -05:00
Saran Ahluwalia
87e08f5fe1
CDC SVI Index: Additions to data-pipeline and comparison tool (#1096)
* wip

* working

* working

* rename

* documentation

* add link

* add readme

* update fieldnames

* typo

* add comparison tool

* revise wording

* variable change for FIPS

* workding

* wording in readme

* cleanup wording

* update comparison tool

* final tune up

* grammar and punctuation in the documentation

* period

* cleanup comments

* added revisions

* parallelism

* PR feedback from Lucas

* remove extraneous fields from comparison tool

* style

* updates

* remove themes

* formatting

* remove referenes to percentile rank

* remove referenes to percentile rank

* typo in fieldnames

* updates based on feedback from Lucas

* fieldnames formatting

* fix broken markdown link

Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2022-01-14 14:52:37 -05:00
Saran Ahluwalia
95a14adb35
Added Census Tract Aggregated Micro-data from EPA Risk-Screening Environmental Indicators (RSEI) model (#1101)
* added initial source code - todo is comparison tool

* added values

* rename fields

* check geoid

* added black

* added revisions

* added clean up to comments

* more comments

* formatting

* cleanup and address PR feedback

* fix changes

* final path changes

* style

* PR feedback

* added final PR comment

* fix flake 8

* add revisions
2022-01-14 13:50:49 -05:00
Saran Ahluwalia
a98ea35f74
Maryland EJSCREEN Addition to comparison tool (#1143)
* finalized

* cleanup notebook

* cleanup

* run black
2022-01-14 13:26:48 -05:00
Jorge Escobar
d686bb856e
Download column order completed (#1077)
* Download column order completed

* Kameron changes

* Lucas and Beth column order changes

* cdc_places update

* passing score

* pandas error

* checkpoint

* score passing

* rounding complete - percentages still showing one decimal

* fixing tests

* fixing percentages

* updating comment

* int percentages! 🎉🎉

* forgot to pass back to df

* passing tests

Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2022-01-13 15:04:16 -05:00
Shaun Verch
93595b7bb4
Re-export requirements.txt to fix version errors (#1099)
* Re-export requirements.txt to fix version errors

The version of lxml in this file had a known vulnerability that got
caught by the "safety" checker, but it is updated in the poetry files.

Regenerated using:
https://github.com/usds/justice40-tool/tree/main/data/data-pipeline#miscellaneous

* Fix lint error

* Run lint on all envs and add comments

* Ignore testst that fail lint because of dev deps

* Ignore medium.com in link checker

It's returning 403s to github actions...
2022-01-05 15:58:24 -05:00
Saran Ahluwalia
a4137fdc98
Add Michigan EJ Screen into data-pipeline's ETL and provide automated scoring and statistics outputs (#1091)
* draft wip

* initial commit

* clear output from notebook

* revert to 65ceb7900f

* draft wip

* initial commit

* clear output from notebook

* revert to 65ceb7900f

* make michigan prefix for readable

* standardize Michigan names and move all constants from class into field names module

* standardize Michigan names and move all constants from class into field names module

* include only pertinent columns for scoring comparison tool

* michigan EJSCREEN standardization

* final PR feedback

* added exposition and summary of Michigan EJSCREEN

* added exposition and summary of Michigan EJSCREEN

* fix typo

Co-authored-by: Saran Ahluwalia <ahlusar.ahluwalia@gmail.com>
2021-12-31 15:38:52 -05:00
Saran Ahluwalia
24f8eb93c4
Tree Equity Output: Change output from Geojson to CSV format for easier analysis (#1089)
Added Tree Equity

* draft wip

* revised documentation

* revised documentation

* revised documentation and defer to super

* change word in logger

* fix flake 8

* address nit

Co-authored-by: Saran Ahluwalia <ahlusar.ahluwalia@gmail.com>
2021-12-30 17:17:28 -05:00
Lucas Merrill Brown
beb0eea5cc
Alternative definition of DACs for comparison (#1068)
* Alternative energy-related definition of DACs
2021-12-27 12:05:59 -05:00
Lucas Merrill Brown
0d57dd572b
Stop swallowing Census API errors (#1051) 2021-12-16 10:54:41 -05:00
Jorge Escobar
9709d08ca3
Update Side Panel Tile Data (#866)
* Update Side Panel Tile Data

* Update Side Panel Tile Data

* Correct indicator names to match csv

* Replace Score with Rate

* Comment out FEMA Loss Rate to troubleshoot

* Removes all "FEMA Loss Rate" array elements

* Revert FEMA to Score

* Remove expected loss rate

* Remove RMP and NPL from BASIC array

* Attempt to make shape mismatch align

- update README typo

* Add Score L indicators to TILE_SCORE_FLOAT_COLUMNS

* removing cbg references

* completes the ticket

* Update side panel fields

* Update index file writing to create parent dir

* Updates from linting

* fixing missing field_names for island territories 90th percentile fields

* Update downloadable fields and fix field name

* Update file fields and tests

* Update ordering of fields and leave TODO

* Update pickle after re-ordering of file

* fixing bugs in etl_score_geo

* Repeating index for diesel fix

* passing tests

* adding pytest.ini

Co-authored-by: Vim USDS <vimal.k.shah@omb.eop.gov>
Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-12-13 14:53:50 -05:00
Saran Ahluwalia
df675b231a
Update HUD Housing Burden (#1005)
* update paths

* size information added in extract function

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-08 11:57:52 -05:00
Lucas Merrill Brown
5706837956
Add NATA cancer risk and respiratory hazard to definition L (#1001) 2021-12-07 12:45:45 -05:00
Lucas Merrill Brown
5a6d6d8557
Issue 954: Add various data sources from Child Opportunity Index (#986)
* Adds four fields:
    * Summer days above 90F
    * Percent low access to healthy food
    * Percent impenetrable surface areas
    * Low third grade reading proficiency

* Each of these four gets added into Definition L in various factors.

* Additionally, I add college attendance fields to the ETL for Census ACS.

* This PR also introduces the notion of "reverse percentiles", relevant to ticket #970.
2021-12-07 11:33:49 -05:00
Saran Ahluwalia
07ee4165b4
New Create indicators for all thresholds exceeded by a community in Definition L (#980)
* added fieldnames

* todo pollution, water, health & workforce

* workforce

* work in progress

* add utility function to replace duplicate summation logic

* move fpl series into add columns - run black .

* added revisions - still a wip

* added fieldnames

* todo pollution, water, health & workforce

* workforce

* work in progress

* add utility function to replace duplicate summation logic

* move fpl series into add columns - run black .

* added revisions - still a wip

* revise workforce and water

* revise housing and add incremental counter for workforce

* last PR nit

* revise workforce

* more PR feedback in score l

* more PR feedback in score l

* more PR feedback in score l

* addd FPL_SERIES and update references in score 1

* fix bugs

* reparameterize function

* final revisions in fieldnames

* make computations all consistent so we assing with FPL_200_SERIES

* fieldnames refactor after clarification and PR review

* finalize

* finalize with no typos

* fix length

* added median income var

* swap thresholds

* remove iteration

* remove stray '

* address flake 8

* added f string formatting and fixed typos

* added f string formatting and fixed typos

* move up

* remove dupes

* reformat

* fix bugs

* fix bugs

* initialize

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-05 19:51:19 -05:00
Lucas Merrill Brown
d705a8244c
adding demographics information to ETL source data (#982) 2021-12-05 17:56:45 -05:00
Saran Ahluwalia
610343a1e3
DoE fix to address #975 (#979)
* Fixed input field name

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-05 08:26:39 -05:00
Saran Ahluwalia
19efdfeb4a
DoE LEAD References Need to be Updated (#976)
* replace temporary fieldnames that are not found and indexed

* fixed field names

* PR review

* PR review - revert

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-04 12:38:50 -05:00
Lucas Merrill Brown
c5dff6e5f7
Issue 242: Add HOLC Grades to data inputs (#978)
* Add mapping inequality data to data inputs

* Add mapping inequality data to comparison tool
2021-12-04 12:23:01 -05:00
Lucas Merrill Brown
1d101c93d2
Issue 844: Add island areas to Definition L (#957)
This ended up being a pretty large task. Here's what this PR does:

1. Pulls in Vincent's data from island areas into the score ETL. This is from the 2010 decennial census, the last census of any kind in the island areas.
2. Grabs a few new fields from 2010 island areas decennial census.
3. Calculates area median income for island areas.
4. Stops using EJSCREEN as the source of our high school education data and directly pulls that from census (this was related to this project so I went ahead and fixed it).
5. Grabs a bunch of data from the 2010 ACS in the states/Puerto Rico/DC, so that we can create percentiles comparing apples-to-apples (ish) from 2010 island areas decennial census data to 2010 ACS data. This required creating a new class because all the ACS fields are different between 2010 and 2019, so it wasn't as simple as looping over a year parameter.
6. Creates a combined population field of island areas and mainland so we can use those stats in our comparison tool, and updates the comparison tool accordingly.
2021-12-03 15:46:10 -05:00
Saran Ahluwalia
8cb9d197df
updated doe enerygy link and changed fieldnames - removed computation step as BURDEN is already ratio (#963)
Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-03 13:33:19 -05:00
Saran Ahluwalia
fdba1eb171
Revisions to FEMA measure and new link for FEMA data (#952)
* per tract collect all diaster total annual expected loss - numerator

* add updated numerators

* EALP columns are missing on tox check - this will ensure only EALP columns that exist are subet on

* EALB columns are missing on tox check - this will ensure only EALP columns that exist are subet on

* reverted to incorporate megatracts

* updated unit tests

* fix tests

* add transform

* remove print statement

* input reflects input from FEMA risks for tracts

* revise tests and update fixtures - clean up tests and main transform function

* added more records

* remove references to Blocks in keyword args in tests

* linting

* addressed latest PR feedback

* remove imports and update arguments to be compatible for 1.1.0

* remove block reference in test

* change precision to 10 digits - refactor tests to accomdate this

Co-authored-by: Saran Ahluwalia <sarahluw@cisco.com>
2021-12-03 12:42:07 -05:00
Vincent La
84874ee4a5
[ISS-751] Updating comments for geocorr ETL (#913) 2021-12-03 10:10:05 -05:00
Lucas Merrill Brown
5c65eed28f
Issue 838: Update comparison tool to use tracts (#934)
* Updating comparison tool to use tracts, and rely more heavily on `field_names`
2021-11-30 18:46:29 -05:00
Lucas Merrill Brown
d2352c6217 Fix too many tracts in join error in ACS (#933) 2021-11-30 13:49:21 -05:00
Lucas Merrill Brown
a4108d24c0 Issue 919: Fix too many tracts issue (#922)
* Some cleanup, adding error warning to merge function

* Error handling around tract merge
2021-11-30 13:49:20 -05:00
Jorge Escobar
16eb29e429 EJScreen Tracts (#918)
* EJScreen Tracts

* EJScreen Tracts
2021-11-30 13:49:20 -05:00
Jorge Escobar
f915e20e91 Esfoobar usds/835 census tracts geojson (#916)
* Census Tracts instead of CBGs

* typo
2021-11-30 13:49:20 -05:00
Shelby Switzer
617f41526f Update Census AMI to ETL into tracts, not CBGs (#900)
* Update Census AMI to ETL into tracts, not CBGs

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-11-30 13:49:20 -05:00
Lucas Merrill Brown
537844236a Update FEMA data to be tracts, not block groups (#906) 2021-11-30 13:49:20 -05:00
Shelby Switzer
893758f1d4 Use tract instead of block group when calling census API (#901)
* Use tract instead of block group when calling census API

* fixing merge conflicts

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-11-30 13:49:20 -05:00
Shelby Switzer
0c8b32e679 Move Housing and Transportation Index to tracts (#903)
Update data download URL to use tract as focus, use tract field name,
and move this dataset to the tracts df list in etl_score.

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-11-30 13:49:20 -05:00
Lucas Merrill Brown
776a52595f Switching island territories data to tracts (#879) 2021-11-30 13:49:20 -05:00
Lucas Merrill Brown
474d010bf4
Quick fix on island territories directory name (#877) 2021-11-16 14:31:11 -05:00
Jorge Escobar
0a21fc6b12
Add territory boundary data (#885)
* Add territory boundary data

* housing and transp

* lint

* lint

* lint
2021-11-16 10:05:09 -05:00
Lucas Merrill Brown
21834b4a91
Issue 883: Update FEMA risk index measure (#884)
* ETL updated

* Adding three fields to score
2021-11-13 11:32:15 -05:00
Lucas Merrill Brown
05ebf9b48c
Add median house value to Definition L (#882)
* Added house value to ETL

* Adding house value to score formula and comp tool
2021-11-13 10:29:23 -05:00
Vincent La
b0dbc90064
[ISS-723] Load Census Data for 4 Territories (#816)
* Adding census decennial data for island territories
2021-11-09 16:32:46 -05:00
Jorge Escobar
053dde0d40
Display score L on map (#849)
* updates to first docker run

* tile constants

* frontend changes

* updating pickles instructions

* pickles
2021-11-05 16:26:14 -04:00