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Add ability to cache ETL data sources (#2169)
* Add a rough prototype allowing a developer to pre-download data sources for all ETLs * Update code to be more production-ish * Move fetch to Extract part of ETL * Create a downloader to house all downloading operations * Remove unnecessary "name" in data source * Format source files with black * Fix issues from pylint and get the tests working with the new folder structure * Clean up files with black * Fix unzip test * Add caching notes to README * Fix tests (linting and case sensitivity bug) * Address PR comments and add API keys for census where missing * Merging comparator changes from main into this branch for the sake of the PR * Add note on using cache (-u) during pipeline
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4d9c1dd11e
commit
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52 changed files with 1787 additions and 686 deletions
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@ -8,12 +8,11 @@ from data_pipeline.etl.base import ExtractTransformLoad
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from data_pipeline.etl.sources.census_acs.etl_imputations import (
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calculate_income_measures,
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)
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from data_pipeline.etl.sources.census_acs.etl_utils import (
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retrieve_census_acs_data,
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)
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from data_pipeline.score import field_names
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from data_pipeline.utils import get_module_logger
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from data_pipeline.utils import unzip_file_from_url
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from data_pipeline.etl.datasource import DataSource
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from data_pipeline.etl.datasource import CensusDataSource
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logger = get_module_logger(__name__)
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@ -28,6 +27,9 @@ class CensusACSETL(ExtractTransformLoad):
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MINIMUM_POPULATION_REQUIRED_FOR_IMPUTATION = 1
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def __init__(self):
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self.census_acs_source = self.get_sources_path() / "acs.csv"
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self.TOTAL_UNEMPLOYED_FIELD = "B23025_005E"
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self.TOTAL_IN_LABOR_FORCE = "B23025_003E"
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self.EMPLOYMENT_FIELDS = [
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@ -311,6 +313,34 @@ class CensusACSETL(ExtractTransformLoad):
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self.df: pd.DataFrame
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def get_data_sources(self) -> [DataSource]:
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# Define the variables to retrieve
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variables = (
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[
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self.MEDIAN_INCOME_FIELD,
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self.MEDIAN_HOUSE_VALUE_FIELD,
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]
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+ self.EMPLOYMENT_FIELDS
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+ self.LINGUISTIC_ISOLATION_FIELDS
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+ self.POVERTY_FIELDS
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+ self.EDUCATIONAL_FIELDS
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+ self.RE_FIELDS
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+ self.COLLEGE_ATTENDANCE_FIELDS
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+ self.AGE_INPUT_FIELDS
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)
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return [
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CensusDataSource(
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source=None,
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destination=self.census_acs_source,
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acs_year=self.ACS_YEAR,
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variables=variables,
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tract_output_field_name=self.GEOID_TRACT_FIELD_NAME,
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data_path_for_fips_codes=self.DATA_PATH,
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acs_type="acs5",
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)
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]
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# pylint: disable=too-many-arguments
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def _merge_geojson(
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self,
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@ -339,27 +369,15 @@ class CensusACSETL(ExtractTransformLoad):
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)
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)
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def extract(self) -> None:
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# Define the variables to retrieve
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variables = (
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[
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self.MEDIAN_INCOME_FIELD,
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self.MEDIAN_HOUSE_VALUE_FIELD,
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]
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+ self.EMPLOYMENT_FIELDS
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+ self.LINGUISTIC_ISOLATION_FIELDS
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+ self.POVERTY_FIELDS
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+ self.EDUCATIONAL_FIELDS
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+ self.RE_FIELDS
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+ self.COLLEGE_ATTENDANCE_FIELDS
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+ self.AGE_INPUT_FIELDS
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)
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def extract(self, use_cached_data_sources: bool = False) -> None:
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self.df = retrieve_census_acs_data(
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acs_year=self.ACS_YEAR,
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variables=variables,
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tract_output_field_name=self.GEOID_TRACT_FIELD_NAME,
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data_path_for_fips_codes=self.DATA_PATH,
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super().extract(
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use_cached_data_sources
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) # download and extract data sources
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self.df = pd.read_csv(
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self.census_acs_source,
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dtype={self.GEOID_TRACT_FIELD_NAME: "string"},
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)
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def transform(self) -> None:
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