686 lines
31 KiB
HTML
686 lines
31 KiB
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<link rel="stylesheet" href="/home_assets/uswds/css/styles.css">
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<title>UMLS Knowledge Sources: File Downloads</title>
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<link rel="schema.DC" href="http://purl.org/dc/elements/1.1/" title="The Dublin Core metadata Element Set" />
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<meta name="DC.Title" content="UMLS Knowledge Sources: File Downloads" />
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<meta name="DC.Publisher" content="U.S. National Library of Medicine" />
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<meta name="DC.Date.Issued" content="2009-01-12" />
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<meta name="DC.Date.Modified" content="2024-10-31" />
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<meta name="NLMDC.Date.LastReviewed" content="2024-10-31" />
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<p> <strong> Official websites use .gov </strong> <br />
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<li class="usa-nav__submenu-item"> <a href="//eresources.nlm.nih.gov/nlm_eresources/"><span>All Products and Services</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//clinicaltrials.gov/"><span>ClinicalTrials.gov</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//collections.nlm.nih.gov/"><span>Digital Collections</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//catalog.nlm.nih.gov"><span>LocatorPlus Catalog</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//meshb.nlm.nih.gov/search"><span>Medical Subject Headings (MeSH)</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//medlineplus.gov/"><span>MedlinePlus</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//pubmed.ncbi.nlm.nih.gov/"><span>PubMed/MEDLINE</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//uts.nlm.nih.gov/uts/"><span>Unified Medical Language System (UMLS)</span></a> </li>
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</ul>
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<li class="usa-nav__submenu-item"> <a href="/hmd/index.html"><span>History of Medicine</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="/ep/index.html"><span>NLM Extramural Programs</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="/research/index.html"><span>NLM Division of Intramural Research</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="https://www.ncbi.nlm.nih.gov/"><span>National Center for Biotechnology Information</span></a> </li>
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<li class="usa-nav__submenu-item"> <a href="//lhncbc.nlm.nih.gov/"><span>Lister Hill National Center for Biomedical Communications</span></a> </li>
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<!-- DIVISIONAL BANNER -->
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<div class="bg-gray-70">
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<div class="grid-container">
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<div class="grid-row divisional">
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<div class="grid-col text-white">
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<div class="float-left">
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<h4 class="margin-bottom-0">Unified Medical Language System<small><sup>®</sup></small> (UMLS<small><sup>®</sup></small>)</h4>
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</div>
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<div class="float-right margin-top-05">
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<p>
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<a class="text-white" href="/research/umls/faq_main.html">FAQ</a>
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| <a class="text-white" href="/research/umls/support.html">Customer Support</a>
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</p>
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</div>
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</div>
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</div>
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</div>
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</div>
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<!--END DIVISIONAL BANNER -->
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<!-- Breadcrumbs -->
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<div class="grid-container">
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<nav class="usa-breadcrumb usa-breadcrumb--wrap padding-top-1" aria-label="Breadcrumbs">
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<ol class="usa-breadcrumb__list">
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<li class="usa-breadcrumb__list-item"> <a href="/index.html" class="usa-breadcrumb__link"><span>Home</span></a> </li>
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<li class="usa-breadcrumb__list-item"> <a href="/healthit" class="usa-breadcrumb__link"><span>Health IT</span></a> </li>
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<li class="usa-breadcrumb__list-item"> <a href="/research/umls/index.html" class="usa-breadcrumb__link"><span>UMLS home page</span></a> </li>
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<li class="usa-breadcrumb__list-item"> <span>UMLS Knowledge Source Downloads</span></li>
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</ol>
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</nav>
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</div>
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<!-- End Breadcrumbs -->
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<main class="padding-bottom-5" id="main">
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<div class="grid-container">
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<div class="grid-row">
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<div class="grid-col">
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<div class="h1">UMLS Knowledge Sources: File Downloads</div>
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</div>
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</div>
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<div class="grid-row grid-gap-1"><!-- start row-->
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||
<div class="tablet:grid-col-12"><!-- start column-->
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||
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<p>
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||
<a class="usa-link"
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href="https://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/release/index.html">
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Release Information
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</a>
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<br />
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<a class="usa-link"
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href="https://www.nlm.nih.gov/research/umls/implementation_resources/metamorphosys/help.html">
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||
MetamorphoSys Installation Help
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||
</a>
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||
</p>
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||
<hr />
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||
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<h2>
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2024AB UMLS Metathesaurus Precomputed Subsets
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</h2>
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<p>
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Ready-to-use subsets of the UMLS Metathesaurus that require no installation or customization. As of 2024AB, precomputed subsets include obsolete and suppressible content. These subsets do not include MetamorphoSys, the Semantic
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Network, or the Specialist Lexicon and Lexical Tools.
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||
|
||
</p>
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||
|
||
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||
<table class="usa-table border-base-lighter margin-bottom-4">
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||
<thead>
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||
<tr>
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<th scope="col" style="min-width: 300px;">
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Release
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</th>
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||
<th scope="col" style="min-width: 400px;">
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Description
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</th>
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||
<th scope="col">
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File Size (compressed)
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</th>
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<th scope="col">
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File Size (uncompressed)
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||
</th>
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||
<th scope="col" style="min-width: 150px;">
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Date
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</th>
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||
</tr>
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||
</thead>
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||
|
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<tbody>
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||
<tr>
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||
<td>
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<a class="usa-link"
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href="https://download.nlm.nih.gov/umls/kss/2024AB/umls-2024AB-metathesaurus-full.zip">
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UMLS Metathesaurus Full Subset
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||
</a>
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||
</td>
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||
<td>
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||
<strong>
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||
Download the UMLS Metathesaurus Full Subset if you want to load the complete Metathesaurus
|
||
data directly into your local environment without any subsetting or additional
|
||
customization.
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||
</strong>
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||
MYSQL and Oracle load scripts are included. To browse the UMLS Metathesaurus data, visit the
|
||
<a class="usa-link" href="https://uts.nlm.nih.gov/uts/umls/home">
|
||
UMLS Metathesaurus Browser</a>.
|
||
<br />
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||
<br />
|
||
MD5 checksum: f9fc1131d64778acf5cc43a9ead31f97
|
||
|
||
</td>
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||
<td>
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||
5.0 GB
|
||
</td>
|
||
<td>
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||
33.7 GB
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||
</td>
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<td>
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||
November 4, 2024
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</td>
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||
</tr>
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||
<tr>
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||
<td>
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||
<a class="usa-link"
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||
href="https://download.nlm.nih.gov/umls/kss/2024AB/umls-2024AB-metathesaurus-level-0.zip">
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UMLS Metathesaurus Level 0 Subset
|
||
</a>
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<br />
|
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<td>
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<strong>
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This subset includes only level 0 source vocabularies
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||
</strong>
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. Level 0 vocabularies do not have any additional restrictions beyond the standard license
|
||
terms. MYSQL and Oracle load scripts are included.
|
||
<br />
|
||
<br />
|
||
MD5 checksum: 76cff7f099c49afb74cc8d2d2716027c
|
||
</td>
|
||
<td>
|
||
1.8 GB
|
||
</td>
|
||
<td>
|
||
10.0 GB
|
||
</td>
|
||
<td>
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||
November 4, 2024
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||
</td>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a class="usa-link" href="https://download.nlm.nih.gov/umls/kss/2024AB/umls-2024AB-mrconso.zip">
|
||
MRCONSO.RRF
|
||
</a>
|
||
</td>
|
||
<td>
|
||
<strong>
|
||
The most widely used UMLS file.
|
||
</strong>
|
||
This file includes names, codes, and concepts from over 200 source vocabularies.
|
||
<a class="usa-link" href="https://www.ncbi.nlm.nih.gov/books/NBK9685/#ch03.sec3.3.4">
|
||
More information...
|
||
</a>
|
||
<br />
|
||
<br />
|
||
MD5 checksum: 10050c166e2cc465aa40b76caf2a758c
|
||
</td>
|
||
<td>
|
||
453.0 MB
|
||
</td>
|
||
<td>
|
||
2.0 GB
|
||
</td>
|
||
<td>
|
||
November 4, 2024
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
|
||
|
||
<p>
|
||
We are considering a new approach to generating UMLS subsets, and we would like your feedback. The new
|
||
approach may involve producing new precomputed subsets or configuring subsets in a web browser instead of in
|
||
MetamorphoSys. We are interested in knowing which features of MetamorphoSys our users consider essential.
|
||
Please submit your comments to the
|
||
<a class="usa-link" href="https://support.nlm.nih.gov/support/create-case/">
|
||
NLM Help Desk
|
||
</a>
|
||
using the subject line: “UMLS Subsets”
|
||
</p>
|
||
|
||
|
||
|
||
|
||
|
||
<table class="usa-table usa-table--border-base-lighter margin-bottom-3">
|
||
<h2>
|
||
2024AB Full UMLS Release Files
|
||
</h2>
|
||
<thead>
|
||
<tr>
|
||
<th scope="col" style="min-width: 270px;">
|
||
Release
|
||
</th>
|
||
<th scope="col" style="min-width: 350px;">
|
||
Description
|
||
</th>
|
||
<th scope="col">
|
||
File Size (compressed)
|
||
</th>
|
||
<th scope="col">
|
||
File Size (uncompressed)
|
||
</th>
|
||
<th scope="col" style="min-width: 150px;">
|
||
Date
|
||
</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td>
|
||
<a class="usa-link" href="https://download.nlm.nih.gov/umls/kss/2024AB/umls-2024AB-full.zip">
|
||
Full Release (umls-2024AB-full.zip)
|
||
</a>
|
||
</td>
|
||
<td>
|
||
The full release includes the UMLS Metathesaurus, Semantic Network, Specialist Lexicon and
|
||
Lexical Tools, database load scripts, and MetamorphoSys for customizing your UMLS subset and
|
||
browsing the data.
|
||
|
||
</td>
|
||
<td>
|
||
5.0 GB
|
||
</td>
|
||
<td>
|
||
35.6 GB
|
||
</td>
|
||
<td>
|
||
November 4, 2024
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
|
||
<div>
|
||
<p>
|
||
<b>
|
||
Download Notes:
|
||
</b>
|
||
</p>
|
||
<ul>
|
||
<li>
|
||
Download the UMLS zip file and extract the contents to a single directory.
|
||
<li>
|
||
Read the README file after downloading, which includes information on installing the UMLS Knowledge
|
||
Sources and highlights changes for this release.
|
||
</li>
|
||
<li>
|
||
Each UMLS release includes MetamorphoSys, required to install Knowledge Sources files, and to
|
||
create, search and browse customized Metathesaurus subsets. MetamorphoSys requires a minimum of 40
|
||
GB of free hard disk and takes 2-10 hours to run on a
|
||
range of platforms tested. The actual time will depend on your configuration, hardware and operating
|
||
system platforms.
|
||
</li>
|
||
</li>
|
||
</ul>
|
||
|
||
</div>
|
||
|
||
<table class="usa-table margin-bottom-4">
|
||
<hr>
|
||
<h2>
|
||
UMLS Metathesaurus History Files
|
||
</h2>
|
||
<p>
|
||
These files include historical data from the UMLS Metathesaurus starting with the 2004AA
|
||
release. Please let us know if you find these files useful by submitting your comments to the
|
||
<a class="usa-link" href="https://support.nlm.nih.gov/support/create-case/">
|
||
NLM Help Desk
|
||
</a>
|
||
using the subject line: “UMLS History Files”.
|
||
</p>
|
||
<thead>
|
||
<tr>
|
||
<th scope="col" style="min-width: 220px;">
|
||
Release
|
||
</th>
|
||
<th scope="col" style="min-width: 400px;">
|
||
Description
|
||
</th>
|
||
<th>
|
||
File Size (compressed)
|
||
</th>
|
||
<th>
|
||
File Size (uncompressed)
|
||
</th>
|
||
<th scope="col" style="min-width: 150px;">
|
||
Date
|
||
</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td>
|
||
<a class="usa-link" href="https://download.nlm.nih.gov/umls/kss/2024AB/umls-history.zip">
|
||
UMLS History Files
|
||
</a>
|
||
</td>
|
||
<td>
|
||
<ul>
|
||
<li>
|
||
<strong>
|
||
Concept History (MRCONSO_HISTORY.txt)
|
||
</strong>
|
||
- This file contains all atoms, concepts, and codes that were dropped from the UMLS
|
||
Metathesaurus MRCONSO.RRF starting with the 2004AA release. This file resembles the
|
||
<a class="usa-link"
|
||
href="https://www.ncbi.nlm.nih.gov/books/NBK9685/table/ch03.T.concept_names_and_sources_file_mr/">
|
||
MRCONSO.RRF file
|
||
</a>
|
||
, but there is an additional column that indicates the last version of the UMLS in which
|
||
each atom appeared.
|
||
</li>
|
||
<li>
|
||
<strong>
|
||
Relation History (MRREL_HISTORY.txt)
|
||
</strong>
|
||
- This file contains all relations dropped from the UMLS Metathesaurus MRREL.RRF file
|
||
starting with the 2004AA release. This file resembles the
|
||
<a class="usa-link"
|
||
href="https://www.ncbi.nlm.nih.gov/books/NBK9685/table/ch03.T.related_concepts_file_mrrel_rrf/">
|
||
MRREL.RRF
|
||
</a>
|
||
, but there is an additional column that indicates the last version of the UMLS in which
|
||
the relation appeared.
|
||
</li>
|
||
<li>
|
||
<strong>
|
||
Source Vocabulary History (MRSAB_HISTORY.txt)
|
||
</strong>
|
||
- This file includes a row for every version of every UMLS source vocabulary updated in
|
||
the UMLS Metathesaurus MRSAB.RRF file starting with the 2004AA release. This file
|
||
resembles the
|
||
<a class="usa-link"
|
||
href="https://www.ncbi.nlm.nih.gov/books/NBK9685/table/ch03.T.source_information_file_mrsab_rrf/">
|
||
MRSAB.RRF
|
||
</a>
|
||
file, but there is an additional column that indicates the version in which the UMLS
|
||
source vocabulary was updated.
|
||
</li>
|
||
</ul>
|
||
<p>
|
||
MD5 checksum: 2eb523aa91ac67663954c5312f298457
|
||
</p>
|
||
</td>
|
||
<td>
|
||
1.1 GB
|
||
</td>
|
||
<td>
|
||
7.6 GB
|
||
</td>
|
||
<td>
|
||
November 4, 2024
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
<p>
|
||
<a class="usa-link" href="http://www.nlm.nih.gov/research/umls/licensedcontent/umlsarchives04.html">
|
||
UMLS Release Archives
|
||
</a>
|
||
<br />
|
||
</p>
|
||
|
||
</div><!-- end column-->
|
||
|
||
</div><!-- end row-->
|
||
|
||
|
||
|
||
|
||
<p class=”margin-top-5”><small>Last Reviewed: October 31, 2024</small></p>
|
||
|
||
</div>
|
||
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|
||
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