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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed?cmd=search&term=31851420 31777944 31267135 29112715 27899674 27899635 25767294 25414356 25212755 23197659 22434827 21109532 18984618 19014584 17135202 15608175 15010543 12520028 12112669 11752315 19470584 15215404 12368255">VIEW ALL ARTICLES IN PUBMED >></A></TD>
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<!-- ========== PREFATORY_TEXT ========= -->
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<!-- TR>
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<P class="indent20bottomspace NormalText3">Prefatory text and <A HREF="#___">link</A>, if applicable text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text.</P>
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<!-- =========== BOX1_CITING_CONSERVED_DOMAINS_RESOURCES =========== -->
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<!-- =========== CITING_CDD ============= -->
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<TR>
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<TD width="10" align="center"><A NAME="CitingCDD"></A><b> </b></TD>
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<TD colspan="2" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/cdd"><SPAN class="HeaderText2C">Conserved Domain Database (CDD)</SPAN></A></TD>
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</TR>
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<!-- ======== CDD_SPARCLE_NAR_202001_HARD_COPY ======= -->
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_202001_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36477806"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36477806">Wang J, Chitsaz F, Derbyshire MK, Gonzales NR, Gwadz M, Lu S, Marchler GH, Song JS, Thanki N, Yamashita RA, Yang M, Zhang D, Zheng C, Lanczycki CJ, Marchler-Bauer A.<B>The conserved domain database in 2023.</B> <B><I>Nucleic Acids Res.</I></B> <B>2022</B> Jan 6;51(D1):D384-D388. doi: 10.1093/nar/gkac1096. [PubMed PMID: 36477806]</A> <A HREF="https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkac1096/6882111">[Full Text at Oxford Academic]</A><TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825596/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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</TR>
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<TR>
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<TD width="10" align="center" class="MicroText"> </TD>
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<TD colspan="2" align="left" class="MicroText"> </TD>
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</TR>
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<!-- ======== END_CDD_SPARCLE_NAR_202001_HARD_COPY ======= -->
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<!-- ======== CDD_SPARCLE_NAR_201701_HARD_COPY ======= -->
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<!-- TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_201701_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674">Marchler-Bauer A, Bo Y, Han L, He J, Lanczycki CJ, Lu S, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Geer LY, Bryant SH. <B>CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.</B> <B><I>Nucleic Acids Res.</I></B> <B>2017</B> Jan 4;45(D1):D200-D203. doi: 10.1093/nar/gkw1129. Epub 2016 Nov 29. [PubMed PMID: 27899674]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw1129">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210587/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center" class="MicroText"> </TD>
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<TD colspan="2" align="left" class="MicroText"> </TD>
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</TR -->
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<!-- ======== END_CDD_SPARCLE_NAR_201701_HARD_COPY ======= -->
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<!-- =========== CITING_CDSearch ============= -->
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<TR>
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<TD width="10" align="center"><A NAME="CitingCDSearch"></A><b> </b></TD>
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<TD align="left" colspan="2"><A HREF="../wrpsb.cgi"><SPAN class="HeaderText2C">CD-Search</SPAN></A> & <A HREF="../../bwrpsb/bwrpsb.cgi"><SPAN class="HeaderText2C">Batch CD-Search</SPAN></A></TD>
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</TR>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDSearch_200407_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/15215404?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/15215404?dopt=AbstractPlus">Marchler-Bauer A, Bryant SH. <B>CD-Search: protein domain annotations on the fly.</B> <B><I>Nucleic Acids Res.</I> 2004</B> Jul 1;32(Web Server issue):W327-31. [PubMed PMID: 15215404]</A> <A HREF="https://academic.oup.com/nar/article/32/suppl_2/W327/1040692/CD-Search-protein-domain-annotations-on-the-fly"><!-- A HREF="http://nar.oxfordjournals.org/content/32/suppl_2/W327" -->[Full Text at Oxford Academic]</A><BR><BR>
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<I>Note: If using <B>Batch CD-Search</B>, please also cite a second article, which discussed the launch of that resource:</I><BR>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/21109532?dopt=AbstractPlus">Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, Deweese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Lu F, Marchler GH, Mullokandov M, Omelchenko MV, Robertson CL, Song JS, Thanki N, Yamashita RA, Zhang D, Zhang N, Zheng C, Bryant SH. <B>CDD: a Conserved Domain Database for the functional annotation of proteins.</B> <B><I>Nucleic Acids Res.</I></B> <B>2011</B> Jan;39(Database issue):D225-9. doi: 10.1093/nar/gkq1189. Epub 2010 Nov 24. [PubMed PMID: 21109532]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkq1189"><!-- A HREF="http://nar.oxfordjournals.org/content/39/suppl_1/D225" -->[Full Text at Oxford Academic]</A> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013737/">[Full text in PubMed Central]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC441592/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center" class="MicroText"> </TD>
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<TD colspan="2" align="left" class="MicroText"> </TD>
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</TR>
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<!-- =========== CITING_CDTree ============= -->
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<TR>
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<TD width="10" align="center"><A NAME="CitingCDTree"></A><b> </b></TD>
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<TD align="left" colspan="2"><A HREF="../../cdtree/cdtree.shtml"><SPAN class="HeaderText2C">CDTree</SPAN></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200701_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/17135202?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/17135202?dopt=AbstractPlus">Marchler-Bauer A, Anderson JB, Derbyshire MK, DeWeese-Scott C, Gonzales NR, Gwadz M, Hao L, He S, Hurwitz DI, Jackson JD, Ke Z, Krylov D, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Thanki N, Yamashita RA, Yin JJ, Zhang D, Bryant SH. <B>CDD: a conserved domain database for interactive domain family analysis.</B> <B><I>Nucleic Acids Res.</I> 2007</B> Jan;35(Database issue):D237-40. Epub 2006 Nov 29. [PubMed PMID: 17135202]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkl951"><!-- A HREF="http://nar.oxfordjournals.org/content/35/suppl_1/D237" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1751546/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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</TR>
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<TR>
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<TD width="10" align="center" class="MicroText"> </TD>
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<TD colspan="2" align="left" class="MicroText"> </TD>
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</TR>
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<!-- =========== CITING_CDART ============= -->
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<TR>
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<TD width="10" align="center"><A NAME="CitingCDART"></A><b> </b></TD>
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<TD align="left" colspan="2"><A HREF="../../lexington/lexington.cgi"><SPAN class="HeaderText2C">Conserved Domain Architecture Retrieval Tool (CDART)</SPAN></A></TD>
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</TR>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDART_2002_GenomeRes"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/12368255?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/12368255?dopt=AbstractPlus">Geer LY, Domrachev M, Lipman DJ, Bryant SH. <B>CDART: protein homology by domain architecture.</B> <B><I>Genome Res.</I> 2002</B> Oct;12(10):1619-23. [PubMed PMID: 12368255]</A> <A HREF="http://genome.cshlp.org/content/12/10/1619">[Full Text at CSH Press]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC187533/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center" class="MiniText"> </TD>
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<TD colspan="2" align="left" class="MiniText"> </TD>
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</TR>
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<!-- =========== CITING_SPARCLE ============= -->
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<TR>
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<TD width="10" align="center"><A NAME="CitingSPARCLE"></A><b> </b></TD>
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<TD align="left" colspan="2"><A HREF="https://www.ncbi.nlm.nih.gov/sparcle"><SPAN class="HeaderText2C">Subfamily Protein Architecture Labeling Engine (SPARCLE)</SPAN></A></TD>
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<!-- ======== CDD_SPARCLE_NAR_202001_HARD_COPY ======= -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="SPARCLE_CDD_202001_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944">Lu S, Wang J, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Marchler GH, Song JS, Thanki N, Yamashita RA, Yang M, Zhang D, Zheng C, Lanczycki CJ, Marchler-Bauer A. <B>CDD/SPARCLE: the conserved domain database in 2020.</B> <B><I>Nucleic Acids Res.</I></B> <B>2020</B> Jan 8;48(D1):D265-D268. doi: 10.1093/nar/gkz991. Epub 2019 Nov 28. [PubMed PMID: 31777944]</A> <A HREF="https://academic.oup.com/nar/article/48/D1/D265/5645006">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6943070/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_201701_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674">Marchler-Bauer A, Bo Y, Han L, He J, Lanczycki CJ, Lu S, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Geer LY, Bryant SH. <B>CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.</B> <B><I>Nucleic Acids Res.</I></B> <B>2017</B> Jan 4;45(D1):D200-D203. doi: 10.1093/nar/gkw1129. Epub 2016 Nov 29. [PubMed PMID: 27899674]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw1129">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210587/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_201611_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left">
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674?dopt=AbstractPlus">Marchler-Bauer A, Yu B, Han L, He J, Lanczycki CJ, Lu S, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Geer LY, Bryant SH. CDD/SPARCLE: functional classification of proteins via subfamily domain architectures. <B><I>Nucleic Acids Res.</I> [2017]</B> [Jan;XX(Database issue):DXXX-XX.] Epub 2016 Nov 29. [PubMed PMID: 27899674]</A> [<A HREF="http://nar.oxfordjournals.org/cgi/content/abstract/gkw1129?ijkey=flTteKSH6X26cio&keytype=ref">[Abstract]</A>] <A HREF="http://nar.oxfordjournals.org/cgi/content/full/gkw1129?ijkey=flTteKSH6X26cio&keytype=ref">[Full Text]</A> <A HREF="http://nar.oxfordjournals.org/cgi/reprint/gkw1129?ijkey=flTteKSH6X26cio&keytype=ref">[PDF]</A><BR><BR>
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<I>(NOTE: The above reference is for the e-publication ahead of print, and will be updated to reflect the volume, issue, pages, and publication date of the print version, once it becomes available in January 2017.)</I>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="SPARCLE_WebCitation"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left">
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To cite <A HREF="https://www.ncbi.nlm.nih.gov/sparcle">SPARCLE</A>, please use the following format (based on:
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<I><A HREF="https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=citmed.TOC&depth=2">Citing Medicine: The NLM Style Guide for Authors, Editors, and Publishers</A> (2nd ed., 2007), <A HREF="https://www.ncbi.nlm.nih.gov/books/NBK7273/">Chapter 24: Databases/Retrieval Systems on the Internet</A>:</I><BR><BR>
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<A HREF="https://www.ncbi.nlm.nih.gov/sparcle">SPARCLE [Internet]. Bethesda (MD): National Library of Medicine (US), National Center for Biotechnology Information. 2016 - [cited YYYY MMM DD]. Available from: https://www.ncbi.nlm.nih.gov/sparcle</A>
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</TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<A NAME="AdditionalReferences"></A>
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<A NAME="AdditionalJournalArticles"></A>
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<TD class="SteelBlueCell HeaderText2B" ALIGN="LEFT" VALIGN="TOP">Additional Journal Articles</TD>
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<TABLE width="90" border="0" cellspacing="0" cellpadding="0">
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<SPAN class="MiniText"> <BR></SPAN>
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Additional Journal Articles</TD>
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<P class="indent20bottomspace NormalText3">Prefatory text and <A HREF="#___">link</A>, if applicable text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text text.</P>
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<!-- ================ ADDITIONAL_REFERENCES ================== -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" align="center"><b>PubMed</b></TD>
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<TD align="center" colspan="2"><b>Table Header 2</b></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DBNAME_NAR_YYYY"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/________?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/________?dopt=AbstractPlus">Author AB, Author AB, Author AB, Author AB, Author AB, Author AB. Title title title title title title. <B><I>JournalName</I> YYYY</B> Mmm; Vol(Issue): PPP-PPP. [PubMed PMID: _______]</A> <A HREF="__________">[Full Text]</A> <A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<!-- ======== END_TEMPLATE ======= -->
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<!-- ===== CDD_TOOLS_202003_Curr Protoc Bioinformatics ===== -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="iCn3D_and_www_bioRxiv_2020"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/37994677"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/37994677">Sayers EW, Beck J, Bolton EE, Brister JR, Chan J, Comeau DC, Connor R, DiCuccio M, Farrell CM, Feldgarden M, Fine AM, Funk K, Hatcher E, Hoeppner M, Kane M, Kannan S, Katz KS, Kelly C, Klimke W, Kim S, Kimchi A, Landrum M, Lathrop S, Lu Z, Malheiro A, Marchler-Bauer A, Murphy TD, Phan L, Prasad AB, Pujar S, Sawyer A, Schmieder E, Schneider VA, Schoch CL, Sharma S, Thibaud-Nissen F, Trawick BW, Venkatapathi T, Wang J, Pruitt KD, Sherry ST. <B>Database resources of the National Center for Biotechnology Information. </B> <B><I>Nucleic Acids Res.</I> 2024</B> Jan 5;52(D1):D33-D43. doi: 10.1093/nar/gkad1044. [PubMed PMID: 37994677]</A> <A HREF="https://academic.oup.com/nar/article/52/D1/D33/7442534">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://https://pmc.ncbi.nlm.nih.gov/articles/PMC9825438/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="iCn3D_and_www_bioRxiv_2020"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36477806"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/37994677">Wang J, Chitsaz F, Derbyshire MK, Gonzales NR, Gwadz M, Lu S, Marchler GH, Song JS, Thanki N, Yamashita RA, Yang M, Zhang D, Zheng C, Lanczycki CJ, Marchler-Bauer A. <B>The conserved domain database in 2023. </B> <B><I>Nucleic Acids Res.</I> 2023</B> Jan 6;51(D1):D384-D388. doi: 10.1093/nar/gkac1096. [PubMed PMID: 36477806]</A> <A HREF="https://academic.oup.com/nar/article/51/D1/D384/6882111">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://https://pmc.ncbi.nlm.nih.gov/articles/PMC9825596/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="iCn3D_and_www_bioRxiv_2020"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36370100"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36370100">Sayers EW, Bolton EE, Brister JR, Canese K, Chan J, Comeau DC, Farrell CM, Feldgarden M, Fine AM, Funk K, Hatcher E, Kannan S, Kelly C, Kim S, Klimke W, Landrum MJ, Lathrop S, Lu Z, Madden TL, Malheiro A, Marchler-Bauer A, Murphy TD, Phan L, Pujar S, Rangwala SH, Schneider VA, Tse T, Wang J, Ye J, Trawick BW, Pruitt KD, Sherry ST. <B>Database resources of the National Center for Biotechnology Information in 2023. </B> <B><I>Nucleic Acids Res.</I> 2023</B> Jan 6;51(D1):D29-D38. doi: 10.1093/nar/gkac1032. [PubMed PMID: 36370100]</A> <A HREF="https://academic.oup.com/nar/article/51/D1/D29/6825348">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825438/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="iCn3D_and_www_bioRxiv_2020"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36350672"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/36350672 ">Paysan-Lafosse T, Blum M, Chuguransky S, Grego T, Pinto BL, Salazar GA, Bileschi ML, Bork P, Bridge A, Colwell L, Gough J, Haft DH, Letunic I, Marchler-Bauer A, Mi H, Natale DA, Orengo CA, Pandurangan AP, Rivoire C, Sigrist CJA, Sillitoe I, Thanki N, Thomas PD, Tosatto SCE, Wu CH, Bateman A. <B>InterPro in 2022. </B> <B><I>Nucleic Acids Res.</I> 2023</B> Jan 6;51(D1):D418-D427. doi: 10.1093/nar/gkac993. [PubMed PMID: 36350672]</A> <A HREF="https://academic.oup.com/nar/article/51/D1/D418/6814474/">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825450//"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="iCn3D_and_www_bioRxiv_2020"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/34850941"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/35961013">de Crecy-Lagard V, Amorin de Hegedus R, Arighi C, Babor J, Bateman A, Blaby I, Blaby-Haas C, Bridge AJ, Burley SK, Cleveland S, Colwell LJ, Conesa A, Dallago C, Danchin A, de Waard A, Deutschbauer A, Dias R, Ding Y, Fang G, Friedberg I, Gerlt J, Goldford J, Gorelik M, Gyori BM, Henry C, Hutinet G, Jaroch M, Karp PD, Kondratova L, Lu Z, Marchler-Bauer A, Martin MJ, McWhite C, Moghe GD, Monaghan P, Morgat A, Mungall CJ, Natale DA, Nelson WC, O'Donoghue S, Orengo C, O'Toole KH, Radivojac P, Reed C, Roberts RJ, Rodionov D, Rodionova IA, Rudolf JD, Saleh L, Sheynkman G, Thibaud-Nissen F, Thomas PD, Uetz P, Vallenet D, Carter EW, Weigele PR, Wood V, Wood-Charlson EM, Xu J. <B>A roadmap for the functional annotation of protein families: a community perspective. </B> <B><I>Database (Oxford).</I> 2022</B> Aug 12;2022:baac062. doi: 10.1093/database/baac062. [PubMed PMID: 35961013]</A> <A HREF="https://academic.oup.com/database/article/doi/10.1093/database/baac062/6663924">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9374478/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="iCn3D_and_www_bioRxiv_2020"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/34850941"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/34850941">Sayers EW, Bolton EE, Brister JR, Canese K, Chan J, Comeau DC, Connor R, Funk K, Kelly C, Kim S, Madej T, Marchler-Bauer A, Lanczycki C, Lathrop S, Lu Z, Thibaud-Nissen F, Murphy T, Phan L, Skripchenko Y, Tse T, Wang J, Williams R, Trawick BW, Pruitt KD, Sherry ST. <B>Database resources of the National Center for Biotechnology Information. </B> <B><I>Nucleic Acids Res.</I> 2021</B> Dec 1. doi: 10.1093/nar/gkab1112. [PubMed PMID: 34850941]</A> <A HREF="https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkab1112/6447242">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8728269/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DBNAME_NAR_YYYY"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/33270901"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/33270901">Li W, O'Neill KR, Haft DH, DiCuccio M, Chetvernin V, Badretdin A, Coulouris G, Chitsaz F, Derbyshire MK, Durkin AS, Gonzales NR, Gwadz M, Lanczycki CJ, Song JS, Thanki N, Wang J, Yamashita RA, Yang M, Zheng C, Marchler-Bauer A, Thibaud-Nissen F. <B>RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation. <I>Nucleic Acids Res. </I> 2020</B> Dec 3:gkaa1105. doi: 10.1093/nar/gkaa1105. [Online ahead of print] [PubMed PMID: 33270901]</A> <A HREF="https://pubmed.ncbi.nlm.nih.gov/33270901">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779008/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DBNAME_NAR_YYYY"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/33156333?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/33156333?dopt=AbstractPlus">Blum M, Chang HY, Chuguransky S, Grego T, Kandasaamy S, Mitchell A, Nuka G, Paysan-Lafosse T, Qureshi M, Raj S, Richardson L, Salazar GA, Williams L, Bork P, Bridge A, Gough J, Haft DH, Letunic I, Marchler-Bauer A, Mi H, Natale DA, Necci M, Orengo CA, Pandurangan AP, Rivoire C, Sigrist CJA, Sillitoe I, Thanki N, Thomas PD, Tosatto SCE, Wu CH, Bateman A, Finn RD. <B>The InterPro protein families and domains database: 20 years on. <I>Nucleic Acids Res. </I> 2020</B> Nov 6:gkaa977. doi: 10.1093/nar/gkaa977. [PubMed PMID: 33156333]</A> <A HREF="https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkaa977/5958491">[Full Text at Oxford Academic]</A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7778928/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DBNAME_NAR_YYYY"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31851420?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31851420?dopt=AbstractPlus">Yang M, Derbyshire MK, Yamashita RA, Marchler-Bauer A. <B>NCBI's Conserved Domain Database and Tools for Protein Domain Analysis. <I>Curr Protoc Bioinformatics</I> 2020</B> Mar;69(1):e90. doi: 10.1002/cpbi.90. [PubMed PMID: 31851420]</A> <A HREF="https://currentprotocols.onlinelibrary.wiley.com/doi/full/10.1002/cpbi.90">[Full Text at Wiley]</A></A><!-- A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A --></TD>
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<TD width="124" align="center" valign="top"> <A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7378889/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_202001_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944">Lu S, Wang J, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Marchler GH, Song JS, Thanki N, Yamashita RA, Yang M, Zhang D, Zheng C, Lanczycki CJ, Marchler-Bauer A. <B>CDD/SPARCLE: the conserved domain database in 2020.</B> <B><I>Nucleic Acids Res.</I></B> <B>2020</B> Jan 8;48(D1):D265-D268. doi: 10.1093/nar/gkz991. Epub 2019 Nov 28. [PubMed PMID: 31777944]</A> <A HREF="https://academic.oup.com/nar/article/48/D1/D265/5645006">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6943070/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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</TR>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DBNAME_NAR_YYYY"></A><A HREF="https://pubmed.ncbi.nlm.nih.gov/32500917?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://pubmed.ncbi.nlm.nih.gov/32500917?dopt=AbstractPlus">Neuwald AF, Lanczycki CJ, Hodges TK, Marchler-Bauer A. <B>Obtaining extremely large and accurate protein multiple sequence alignments from curated hierarchical alignments. <I>Database</I> (Oxford) 2020</B> Jan 1;2020. pii: baaa042. doi: 10.1093/database/baaa042. [PubMed PMID: 32500917]</A> <A HREF="https://academic.oup.com/database/article/doi/10.1093/database/baaa042/5850901">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7297217/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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</TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DBNAME_NAR_YYYY"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/30398656?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/30398656?dopt=AbstractPlus">Mitchell AL, Attwood TK, Babbitt PC, Blum M, Bork P, Bridge A, Brown SD, Chang HY, El-Gebali S, Fraser MI, Gough J, Haft DR, Huang H, Letunic I, Lopez R, Luciani A, Madeira F, Marchler-Bauer A, Mi H, Natale DA, Necci M, Nuka G, Orengo C, Pandurangan AP, Paysan-Lafosse T, Pesseat S, Potter SC, Qureshi MA, Rawlings ND, Redaschi N, Richardson LJ, Rivoire C, Salazar GA, Sangrador-Vegas A, Sigrist CJA, Sillitoe I, Sutton GG, Thanki N, Thomas PD, Tosatto SCE, Yong SY, Finn RD. <B>InterPro in 2019: improving coverage, classification and access to protein sequence annotations. <I>Nucleic Acids Res.</I> 2019</B> Jan 8;47(D1):D351-D360. doi: 10.1093/nar/gky1100. [PubMed PMID: 30398656]</A> <A HREF="https://academic.oup.com/nar/article/47/D1/D351/5162469">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323941/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<!-- ===== END_CDD_TOOLS_202003_Curr Protoc Bioinformatics ===== -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_202001_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944">Lu S, Wang J, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Marchler GH, Song JS, Thanki N, Yamashita RA, Yang M, Zhang D, Zheng C, Lanczycki CJ, Marchler-Bauer A. <B>CDD/SPARCLE: the conserved domain database in 2020.</B> <B><I>Nucleic Acids Res.</I></B> <B>2020</B> Jan 8;48(D1):D265-D268. doi: 10.1093/nar/gkz991. Epub 2019 Nov 28. [PubMed PMID: 31777944]</A> <A HREF="https://academic.oup.com/nar/article/48/D1/D265/5645006">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6943070/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<!-- ======== END_CDD_SPARCLE_NAR_202001_HARD_COPY ======= -->
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<!-- ==== END_CURRENTLY_UNDER_CitingCDD_and_CitingSPARCLE ==== -->
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<!-- ======== CDD_SPARCLE_NAR_20191128_EPUB ======= -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_201911_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left">
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31777944?dopt=AbstractPlus">Lu S, Wang J, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Marchler GH, Song JS, Thanki N, Yamashita RA, Yang M, Zhang D, Zheng C, Lanczycki CJ, Marchler-Bauer A. CDD/SPARCLE: the conserved domain database in 2020. <B><I>Nucleic Acids Res.</I> 2019</B> Nov 28. pii: gkz991. doi: 10.1093/nar/gkz991. [Epub ahead of print] [PubMed PMID: 31777944]</A> <A HREF="https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkz991/5645006">[Full Text at Oxford Academic]</A><BR><BR>
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<I>(NOTE: The above reference is for the e-publication ahead of print, and will be updated to reflect the volume, issue, pages, and publication date of the print version, once it becomes available in January 2020.)</I>
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</TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<!-- ======== END_CDD_SPARCLE_NAR_20191128_EPUB ======= -->
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_text_similarity_searches_Database_2019"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31267135?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/31267135?dopt=AbstractPlus">Islamaj R, Wilbur WJ, Xie N, Gonzales NR, Thanki N, Yamashita R, Zheng C, Marchler-Bauer A, Lu Z. <b>PubMed Text Similarity Model and its application to curation efforts in the Conserved Domain Database.</b> <B><I>Database</I> (Oxford) 2019</B> Jan 1;2019. pii: baz064. doi: 10.1093/database/baz064. [PubMed PMID: 31267135]</A> <A HREF="https://academic.oup.com/database/article/doi/10.1093/database/baz064/5527151">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606757/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="RefSeq_PGAP_NAR_2017"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/29112715?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/29112715?dopt=AbstractPlus">Haft DH, DiCuccio M, Badretdin A, Brover V, Chetvernin V, O'Neill K, Li W, Chitsaz F, Derbyshire MK, Gonzales NR, Gwadz M, Lu F, Marchler GH, Song JS, Thanki N, Yamashita RA, Zheng C, Thibaud-Nissen F, Geer LY, Marchler-Bauer A, Pruitt KD. <b>RefSeq: an update on prokaryotic genome annotation and curation.</b> <B><I>Nucleic Acids Res.</I> 2017</B> Nov 3. doi: 10.1093/nar/gkx1068. <!-- Vol(Issue): PPP-PPP. -->[Epub ahead of print] <!-- Epub 2017 Nov 03. --> [PubMed PMID: 29112715]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkx1068">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><!-- A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A --></TD>
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<!-- ======== CDD_SPARCLE_NAR_201701_HARD_COPY ======= -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_201701_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674">Marchler-Bauer A, Bo Y, Han L, He J, Lanczycki CJ, Lu S, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Geer LY, Bryant SH. <B>CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.</B> <B><I>Nucleic Acids Res.</I></B> <B>2017</B> Jan 4;45(D1):D200-D203. doi: 10.1093/nar/gkw1129. Epub 2016 Nov 29. [PubMed PMID: 27899674]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw1129">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210587/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<!-- ======== END_CDD_SPARCLE_NAR_201701_HARD_COPY ======= -->
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_SPARCLE_201911_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left">
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899674?dopt=AbstractPlus">Marchler-Bauer A, Yu B, Han L, He J, Lanczycki CJ, Lu S, Chitsaz F, Derbyshire MK, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Geer LY, Bryant SH. CDD/SPARCLE: functional classification of proteins via subfamily domain architectures. <B><I>Nucleic Acids Res.</I> [2017]</B> [Jan;XX(Database issue):DXXX-XX.] Epub 2016 Nov 29. [PubMed PMID: 27899674]</A> [<A HREF="http://nar.oxfordjournals.org/cgi/content/abstract/gkw1129?ijkey=flTteKSH6X26cio&keytype=ref">[Abstract]</A>] <A HREF="http://nar.oxfordjournals.org/cgi/content/full/gkw1129?ijkey=flTteKSH6X26cio&keytype=ref">[Full Text]</A> <A HREF="http://nar.oxfordjournals.org/cgi/reprint/gkw1129?ijkey=flTteKSH6X26cio&keytype=ref">[PDF]</A><BR><BR>
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<I>(NOTE: The above SPARCLE reference is for the e-publication ahead of print, and will be updated to reflect the volume, issue, pages, and publication date of the print version, once it becomes available in January 2017.)</I>
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</TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<!-- ======== END_CDD_SPARCLE_NAR_20161129_EPUB ======= -->
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<TR>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="InterPro_NAR_2017"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899635?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/27899635?dopt=AbstractPlus">Finn RD, Attwood TK, Babbitt PC, Bateman A, Bork P, Bridge AJ, Chang HY, Dosztányi Z, El-Gebali S, Fraser M, Gough J, Haft D, Holliday GL, Huang H, Huang X, Letunic I, Lopez R, Lu S, Marchler-Bauer A, Mi H, Mistry J, Natale DA, Necci M, Nuka G, Orengo CA, Park Y, Pesseat S, Piovesan D, Potter SC, Rawlings ND, Redaschi N, Richardson L, Rivoire C, Sangrador-Vegas A, Sigrist C, Sillitoe I, Smithers B, Squizzato S, Sutton G, Thanki N, Thomas PD, Tosatto SC, Wu CH, Xenarios I, Yeh LS, Young SY, Mitchell AL. <b>InterPro in 2017-beyond protein family and domain annotations.</b> <B><I>Nucleic Acids Res.</I> 2017</B> Jan 4;45(D1):D190-D199. doi: 10.1093/nar/gkw1107. Epub 2016 Nov 29. [PubMed PMID: 27899635]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw1107">[Full Text at Oxford Academic]</A> </TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210578/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="DomainAnnotationConsistency_Database_201503"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/25767294?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/25767294?dopt=AbstractPlus">Derbyshire MK, Gonzales NR, Lu S, He J, Marchler GH, Wang Z, Marchler-Bauer A. <B>Improving the consistency of domain annotation within the Conserved Domain Database.</B> <B><I>Database (Oxford)</I> 2015</B> Mar 12; 2015. pii: bav012. doi: 10.1093/database/bav012. Print 2015. [PubMed PMID: 25767294]</A> <A HREF="https://academic.oup.com/database/article-lookup/doi/10.1093/database/bav012"><!-- A HREF="http://database.oxfordjournals.org/content/2015/bav012.long" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356950/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_NAR_201501"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/25414356?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/25414356?dopt=AbstractPlus">Marchler-Bauer A, Derbyshire MK, Gonzales NR, Lu S, Chitsaz F, Geer LY, Geer RC, He J, Gwadz M, Hurwitz DI, Lanczycki CJ, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Bryant SH. <B>CDD: NCBI's conserved domain database.</B> <B><I>Nucleic Acids Res.</I></B> <B>2015</B> Jan 28;43(Database issue):D222-2. doi: 10.1093/nar/gku1221. Epub 2014 Nov 20. [PubMed PMID: 25414356]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gku1221"><!-- A HREF="http://nar.oxfordjournals.org/content/43/D1/D222" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383992/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="Cytoscape_Bioinformatics_2014"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/25212755?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/25212755?dopt=AbstractPlus">Morris JH, Wu A, Yamashita RA, Marchler-Bauer A, Ferrin TE. <B>cddApp: A Cytoscape App for Accessing the NCBI Conserved Domain Database.</B> <B><I>Bioinformatics</I> 2015</B> Jan 1;31(1):134-6. doi: 10.1093/bioinformatics/btu605. Epub 2014 Sep 10. [PubMed PMID: 25212755]</A><A HREF="https://academic.oup.com/bioinformatics/article/31/1/134/2366208/cddApp-a-Cytoscape-app-for-accessing-the-NCBI?searchresult=1">[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4271147/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_NAR_2013"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/23197659?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/23197659?dopt=AbstractPlus">Marchler-Bauer A, Zheng C, Chitsaz F, Derbyshire MK, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lanczycki CJ, Lu F, Lu S, Marchler GH, Song JS, Thanki N, Yamashita RA, Zhang D, Bryant SH. <B>CDD: conserved domains and protein three-dimensional structure.</B> <B><I>Nucleic Acids Res.</I> 2013</B> Jan 1;41(D1):D348-52. doi: 10.1093/nar/gks1243. Epub 2012 Nov 28. [PubMed PMID: 23197659]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gks1243"><!-- A HREF="http://nar.oxfordjournals.org/content/41/D1/D348" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531192/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="AutomatedHierarchicalClassification_BMCBioinformatics_2012"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/22726767?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/22726767?dopt=AbstractPlus">Neuwald AF, Lanczycki CJ, Marchler-Bauer A. <B>Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures.</B> <B><I>BMC Bioinformatics</I> 2012</B> Jun 22;13(1):144. doi: 10.1186/1471-2105-13-144. [PubMed PMID: 22726767]</A> <A HREF="https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-13-144"><!-- A HREF="http://www.biomedcentral.com/1471-2105/13/144/abstract" -->[Full Text at BioMed Central]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599474/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="FunctionalSites_Database_2012"></A><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/22434827?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/22434827?dopt=AbstractPlus">Derbyshire MK, Lanczycki CJ, Bryant SH, Marchler-Bauer A. <B>Annotation of functional sites with the Conserved Domain Database.</B> <B><I>Database (Oxford)</I> 2012</B> Mar 20;2012:bar058. Print 2012. doi: https://doi.org/10.1093/database/bar058. [PubMed PMID: 22434827]</A> <A HREF="https://academic.oup.com/database/article-lookup/doi/10.1093/database/bar058"><!-- A HREF="http://database.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=22434827" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308149/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_201101_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/21109532?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/21109532?dopt=AbstractPlus">Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, Deweese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Lu F, Marchler GH, Mullokandov M, Omelchenko MV, Robertson CL, Song JS, Thanki N, Yamashita RA, Zhang D, Zhang N, Zheng C, Bryant SH. <B>CDD: a Conserved Domain Database for the functional annotation of proteins.</B> <B><I>Nucleic Acids Res.</I></B> <B>2011</B> Jan;39(Database issue):D225-9. doi: 10.1093/nar/gkq1189. Epub 2010 Nov 24. [PubMed PMID: 21109532]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkq1189"><!-- A HREF="http://nar.oxfordjournals.org/content/39/suppl_1/D225" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013737/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="Fong_2009_Bioinformatics"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/19470584?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/19470584?dopt=AbstractPlus">Fong JH, Marchler-Bauer A. <B>CORAL: Aligning conserved core regions across domain families.</B> <B><I>Bioinformatics.</I> 2009</B> Aug 1;25(15):1862-8. doi: 10.1093/bioinformatics/btp334. Epub 2009 May 26. [PubMed PMID: 19470584]</A> <A HREF="https://academic.oup.com/bioinformatics/article-lookup/doi/10.1093/bioinformatics/btp334"><!-- A HREF="http://bioinformatics.oxfordjournals.org/content/25/15/1862" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2712342/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200901_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/18984618?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/18984618?dopt=AbstractPlus">Marchler-Bauer A, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Tasneem A, Thanki N, Yamashita RA, Zhang D, Zhang N, Bryant SH. <B>CDD: specific functional annotation with the Conserved Domain Database.</B> <B><I>Nucleic Acids Res.</I> 2009</B> Jan;37(Database issue):D205-10. doi: 10.1093/nar/gkn845. Epub 2008 Nov 4. [PubMed PMID: 18984618]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkn845"><!-- A HREF="http://nar.oxfordjournals.org/content/37/suppl_1/D205" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686570/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="Fong_2008_BMCResNotes"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/19014584?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/19014584?dopt=AbstractPlus">Fong JH, Marchler-Bauer A. <B>Protein subfamily assignment using the Conserved Domain Database.</B> <B><I>BMC Res Notes.</I> 2008</B> Nov 14;1(1):114. doi: 10.1186/1756-0500-1-114. [PubMed PMID: 19014584]</A> <A HREF="https://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0500-1-114"><!-- A HREF="http://www.biomedcentral.com/1756-0500/1/114" -->[Full Text at BioMed Central]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2632666/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200501_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/15608175?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/15608175?dopt=AbstractPlus">Marchler-Bauer A, Anderson JB, Cherukuri PF, DeWeese-Scott C, Geer LY, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Liebert CA, Liu C, Lu F, Marchler GH, Mullokandov M, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Yamashita RA, Yin J, Zhang D, Bryant SH. <B>CDD: a Conserved Domain Database for protein classification.</B> <B><I>Nucleic Acids Res.</I> 2005</B> Jan 1;33(Database issue):D192-6. doi: 10.1093/nar/gki069. [PubMed PMID: 15608175]</A> <A HREF="https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gki069"><!-- A HREF="http://nar.oxfordjournals.org/content/33/suppl_1/D192" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC540023/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200404_ProtSci"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/15010543?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/15010543?dopt=AbstractPlus">Panchenko AR, Kondrashov F, Bryant S. <B>Prediction of functional sites by analysis of sequence and structure conservation.</B> <B><I>Protein Sci.</I> 2004</B> Apr;13(4):884-92. doi: 10.1110/ps.03465504. [PubMed PMID: 15010543]</A> <!-- A HREF="http://dx.doi.org/10.1110/ps.03465504" --><A HREF="http://onlinelibrary.wiley.com/doi/10.1110/ps.03465504/full">[Full Text at Wiley Online Library]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2280064/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200301_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/12520028?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/12520028?dopt=AbstractPlus">Marchler-Bauer A, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler GH, Mazumder R, Nikolskaya AN, Panchenko AR, Rao BS, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. <B>CDD: a curated Entrez database of conserved domain alignments.</B> <B><I>Nucleic Acids Res.</I> 2003</B> Jan 1;31(1):383-7. doi: 10.1093/nar/gkg087. [PubMed PMID: 12520028]</A> <A HREF="https://academic.oup.com/nar/article/31/1/383/2401404/CDD-a-curated-Entrez-database-of-conserved-domain"><!-- A HREF="http://nar.oxfordjournals.org/content/31/1/383" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC165534/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200208_Proteins"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/12112669?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/12112669?dopt=AbstractPlus">Marchler-Bauer A, Panchenko AR, Ariel N, Bryant SH. <B>Comparison of sequence and structure alignments for protein domains.</B> <B><I>Proteins.</I> 2002</B> Aug 15;48(3):439-46. [PubMed PMID: 12112669]</A> <A HREF="http://onlinelibrary.wiley.com/doi/10.1002/prot.10163/abstract"><!-- A HREF="http://onlinelibrary.wiley.com/doi/10.1002/prot.10163/full" -->[Full Text at Wiley Online Library]</A></TD>
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<TD width="124" align="center" valign="top"> <!-- A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A --></TD>
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<TD width="10" align="center"><b> </b></TD>
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<TD width="18" valign="top" align="left"><A NAME="CDD_200201_NAR"></A>
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<A HREF="https://www.ncbi.nlm.nih.gov/pubmed/11752315?dopt=AbstractPlus"><img border=0 align=left height=15 width=15 style="margin-right:0.2em" src="../../IMG/PubMed.gif"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/11752315?dopt=AbstractPlus">Marchler-Bauer A, Panchenko AR, Shoemaker BA, Thiessen PA, Geer LY, Bryant SH. <B>CDD: a database of conserved domain alignments with links to domain three-dimensional structure.</B> <B><I>Nucleic Acids Res.</I> 2002</B> Jan 1;30(1):281-3. [PubMed PMID: 11752315]</A> <A HREF="https://academic.oup.com/nar/article/30/1/281/1332504/CDD-a-database-of-conserved-domain-alignments-with"><!-- A HREF="http://nar.oxfordjournals.org/content/30/1/281" -->[Full Text at Oxford Academic]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC99109/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/pubmed/________?dopt=AbstractPlus">Author AB, Author AB, Author AB, Author AB, Author AB, Author AB. Title title title title title title. <B><I>JournalName</I> YYYY</B> Mmm; Vol(Issue): PPP-PPP. [PubMed PMID: _______]</A> <A HREF="__________">[Full Text]</A> <A HREF="https://www.ncbi.nlm.nih.gov/pmc/articles/_______/">[Free Author Manuscript in PubMedCentral]</A></TD>
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<TD width="124" align="center" valign="top"><A href="https://www.ncbi.nlm.nih.gov/pmc/articles/__________/"><img src="https://www.ncbi.nlm.nih.gov/Structure/IMG/full_text/pubmed-pmc.gif" WIDTH="120" HEIGHT="28" BORDER="0" ALT="Click here to read"></A></TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/books/NBK169830/">Sayers E. <B>NCBI Protein Resources.</B> IN The <I><B>NCBI Handbook, 2nd edition</B></I> [Internet], National Library of Medicine (US), National Center for Biotechnology Information, Bethesda, MD, <B>2013</B> Nov. 12, 2013 [revised 2013 Nov. 21]. [cited 2017 Feb 02]. Available from https://www.ncbi.nlm.nih.gov/books/NBK169830/</A> in <A HREF="https://www.ncbi.nlm.nih.gov/books">Entrez Books (https://www.ncbi.nlm.nih.gov/books)</A>.</TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/books/NBK21095/">Sayers E, Bryant SH. <B>Macromolecular Structure Databases.</B> Chapter 3 IN The <I><B>NCBI Handbook</B></I> [Internet], National Library of Medicine (US), National Center for Biotechnology Information, Bethesda, MD, <B>2002</B> Oct. 9 [revised 2003 Aug. 13]. [cited 2009 Feb 04]. Available from https://www.ncbi.nlm.nih.gov/books/NBK21095/</A> in <A HREF="https://www.ncbi.nlm.nih.gov/books">Entrez Books (https://www.ncbi.nlm.nih.gov/books)</A>.</TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=handbook.chapter.ch3">Sayers E, Bryant SH. Macromolecular Structure Databases. Chapter 3 IN The <I><B>NCBI Handbook</B></I> [Internet], National Library of Medicine (US), National Center for Biotechnology Information, Bethesda, MD, <B>2002</B> Oct. 9 [revised 2003 Aug. 13]. [cited 2009 Feb 04]. Available from [https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=handbook.chapter.ch3 in] Entrez Books (https://www.ncbi.nlm.nih.gov/books)</A>.</TD>
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<TD valign="top" align="left"><A HREF="https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=handbook.chapter.ch3">Sayers E, Bryant SH. Macromolecular Structure Databases. Chapter 3</A> IN The <A HREF="https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=handbook"><I><B>NCBI Handbook</B></I></A> [Internet], <A HREF="https://www.nlm.nih.gov/">National Library of Medicine (US)</A>, <A HREF="https://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information</A>, Bethesda, MD, <B>2002</B> Oct. 9 [revised 2003 Aug. 13]. [cited 2009 Feb 04]. Available from [<A HREF="https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=handbook.chapter.ch3">https://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=handbook.chapter.ch3</A> in] <A HREF="https://www.ncbi.nlm.nih.gov/books">Entrez Books (https://www.ncbi.nlm.nih.gov/books)</A>.</TD>
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