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<div class="h1">MEDLINE Databank Sources</div>
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<p>
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MEDLINE citations may carry the databank names listed in the two tables shown below. The ClinicalTrial data repositories are listed in the first table and the second table contains other data sources such as Molecular Sequence Data; Gene Expression Data; PubChem Identifiers; BioProject Identifiers; and other scientific data repository identifiers.
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</p>
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<p>These databank names appear in the DatabankName element of the XML version of the citation.</p>
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<p> In PubMed the DatabankName XML element is called the Secondary Source ID and is designated as SI in the MEDLINE and Abstract displays. </p>
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<p> To search for the presence of a databank source value (SI) in PubMed, regardless of the specific value, search: hasdatabanklist
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</p>
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<p> To search for a specific value of a data source search the databank name abbreviation, qualified by [SI], in PubMed.
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Example: ANZCTR [SI]
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</p>
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<p>
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More information on the Databank Sources (Secondary Source (SI)) is available at:
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<a href="https://www.nlm.nih.gov/bsd/mms/medlineelements.html#si">https://www.nlm.nih.gov/bsd/mms/medlineelements.html#si
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</a></p>
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<br/>
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<table>
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<thead>
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<tr>
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<th>Trial Registry Abbreviation</th>
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<th><strong>Clinical Trial Registry Full Name </strong></th>
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<th>Approximate Start Date</th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<td><strong>ANZCTR</strong></td>
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<td><a href="http://www.anzctr.org.au/">Australian New Zealand Clinical Trials Registry</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>ChiCTR</strong></td>
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<td><a href="https://www.chictr.org.cn/indexEN.html">Chinese Clinical Trials Registry</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>CRiS</strong></td>
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<td><a href="https://cris.nih.go.kr/cris/search/listDetail.do">Clinical Research Information Service, Republic of Korea</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>ClinicalTrials.gov</strong></td>
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<td><a href="https://clinicaltrials.gov/">ClinicalTrials.gov Database (NIH/NLM)</a></td>
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<td>2005 </td>
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</tr>
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<tr>
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<td><strong>CTRI</strong></td>
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<td><a href="http://ctri.nic.in/">Clinical Trials Registry - India</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>DRKS</strong></td>
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<td><a href="https://www.drks.de">German Clinical Trials Register</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>EudraCT</strong></td>
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<td><a href="https://www.clinicaltrialsregister.eu/">EU Clinical Trials Register</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>IRCT</strong></td>
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<td><a href="https://www.irct.ir/">Iranian Registry of Clinical Trials</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>ISRCTN</strong></td>
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<td><a href="https://www.isrctn.com/">International Standard Randomized Controlled Trial Number (ISRCTN.com) Register</a></td>
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<td>2006</td>
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</tr>
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<tr>
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<td><strong> JapicCTI </strong></td>
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<td> Japan Pharmaceutical Information Center (Japan Registry Member) </td>
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<td> 2017 </td>
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</tr>
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<tr>
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<td><strong> JMACCT </strong></td>
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<td> Center for Clinical Trials, Japan Medical Association (Japan Registry Member) </td>
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<td> 2017 </td>
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</tr>
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<tr>
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<td><strong>JPRN</strong></td>
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<td><a href="https://rctportal.niph.go.jp/">Japan Primary Registries Network</a> (info in English at WHO site)</td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>NTR</strong></td>
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<td>The Netherlands National Trial Register</td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>PACTR</strong></td>
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<td>Pan African Clinical Trial Register</td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>ReBec</strong></td>
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<td><a href="https://ensaiosclinicos.gov.br/">Brazilian Clinical Trials Registry</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>REPEC</strong></td>
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<td><a href="https://ensayosclinicos-repec.ins.gob.pe/en/">Peruvian Clinical Trial Registry </a></td>
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<td>2018 </td>
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</tr>
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<tr>
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<td><strong>RPCEC</strong></td>
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<td><a href="https://rpcec.sld.cu/en">Cuban Public Registry of Clinical Trials</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>SLCTR</strong></td>
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<td><a href="http://slctr.lk/">Sri Lanka Clinical Trials Registry</a></td>
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<td>2014 </td>
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</tr>
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<tr>
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<td><strong>TCTR</strong></td>
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<td><a href="https://www.thaiclinicaltrials.org/">Thai Clinical Trials Registry</a></td>
|
||
<td>2014</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong> UMIN CTR </strong></td>
|
||
<td> University Hospital Medical Information Network Clinical Trial Registry (Japan Registry Member) </td>
|
||
<td> 2017 </td>
|
||
</tr>
|
||
|
||
</tbody>
|
||
</table>
|
||
|
||
<br/>
|
||
|
||
<table>
|
||
<thead>
|
||
<tr>
|
||
<th>MEDLINE Databank Name Abbreviation</th>
|
||
<th><strong>Databank Full Name</strong></th>
|
||
<th>Approximate Start Date</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
|
||
<tr>
|
||
<td><strong>BioProject</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/bioproject/">BioProject Database (NIH/NLM)</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
|
||
|
||
<tr>
|
||
<td><strong>dbGaP</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/gap">Database of Genotypes and Phenotypes (NIH/NLM)</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>dbSNP</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/snp/">Database of Short Genetic Variations (NIH/NLM)</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>dbVar</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/dbvar/">Database of Genomic Structural Variation (NIH/NLM)</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>Dryad </strong></td>
|
||
<td><a href="http://datadryad.org/">Dryad </a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
|
||
|
||
<tr>
|
||
<td><strong>figshare </strong></td>
|
||
<td><a href="http://figshare.com/">figshare</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>GDB</strong></td>
|
||
<td>Johns Hopkins University Genome Data Bank (ceased in 2008)</td>
|
||
<td>1988</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>GENBANK</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/genbank/">GenBank Nucleic Acid Sequence Database (NIH/NLM)</a></td>
|
||
<td>1988</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>GEO</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/geo/">Gene Expression Omnibus Database (NIH/NLM)</a></td>
|
||
<td>2006</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>OMIM</strong></td>
|
||
<td><a href="http://omim.org/">Mendelian Inheritance in Man (McKusick)</a></td>
|
||
<td>1988</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>PDB</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/protein/">Protein Data Bank (NIH/NLM)</a></td>
|
||
<td>1988</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>PIR</strong></td>
|
||
<td><a href="https://proteininformationresource.org/">Protein Identification Resource</a></td>
|
||
<td>1988</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>PubChem-BioAssay</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/pcassay">PubChem BioAssay Database (NIH/NLM)</a></td>
|
||
<td>2007</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>PubChem-Compound</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/pccompound/">PubChem Compound Database (NIH/NLM)</a></td>
|
||
<td>2007</td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>PubChem-Substance</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/pcsubstance">PubChem Substance Database (NIH/NLM)</a></td>
|
||
<td>2007</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>RefSeq</strong></td>
|
||
<td><a href="http://www.ncbi.nlm.nih.gov/refseq/">Reference Sequence Database (NIH/NLM)</a></td>
|
||
<td>1988</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>SRA</strong></td>
|
||
<td><a href="https://www.ncbi.nlm.nih.gov/sra/">Sequence Read Archive (SRA) Database (NIH/NLM)</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>SWISSPROT</strong></td>
|
||
<td><a href="http://www.uniprot.org/">Protein Sequence Database</a></td>
|
||
<td>1988</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td><strong>UniMES</strong></td>
|
||
<td><a href="http://www.uniprot.org/help/unimes">UniProt Metagenomic and Environmental Sequences Database</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>UniParc</strong></td>
|
||
<td><a href="http://www.uniprot.org/uniparc/">UniProt Archive Database</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>UniProtKB</strong></td>
|
||
<td><a href="http://www.uniprot.org/uniprot/">UniProt Knowledgebase Database</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
<tr>
|
||
<td><strong>UniRef</strong></td>
|
||
<td><a href="http://www.uniprot.org/uniref/">UniProt Reference Clusters Database</a></td>
|
||
<td>2014 </td>
|
||
</tr>
|
||
|
||
</tbody>
|
||
</table>
|
||
|
||
|
||
|
||
|
||
|
||
<p class=”margin-top-5”><small>Last Reviewed: December 14, 2023</small></p>
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