nih-gov/www.ncbi.nlm.nih.gov/guide/genomes-maps/index.html

492 lines
30 KiB
HTML
Raw Blame History

This file contains invisible Unicode characters

This file contains invisible Unicode characters that are indistinguishable to humans but may be processed differently by a computer. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

<?xml version="1.0" encoding="utf-8"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head><meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<!-- AppResources meta begin -->
<meta name="paf-app-resources" content="" />
<!-- AppResources meta end -->
<!-- TemplateResources meta begin -->
<meta name="paf_template" content="StdNCol" />
<!-- TemplateResources meta end -->
<!-- Page meta begin -->
<!-- Page meta end -->
<!-- Logger begin -->
<meta xmlns:ncbi-portal="http://ncbi.gov/portal/XSLT/namespace" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" name="ncbi_app" content="guide" /><meta xmlns:ncbi-portal="http://ncbi.gov/portal/XSLT/namespace" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" name="ncbi_pdid" content="ResourceListPage" />
<!-- Logger end -->
<title>Genomes &amp; Maps - Site Guide - NCBI</title>
<!-- PageFixtures headcontent begin -->
<!-- PageFixtures headcontent end -->
<!-- AppResources external_resources begin -->
<script type="text/javascript" src="/core/jig/1.15.6/js/jig.min.js"></script>
<!-- AppResources external_resources end -->
<!-- Page headcontent begin -->
<!-- Page headcontent end -->
<!-- PageFixtures resources begin -->
<xi:include xmlns:xi="http://www.w3.org/2001/XInclude" href="http://127.0.0.1/sites/static/header_footer" xpointer="xmlns(x=http://www.w3.org/1999/xhtml) xpointer(//x:link[@rel='stylesheet'])"></xi:include>
<!-- PageFixtures resources end -->
<link rel="shortcut icon" href="//www.ncbi.nlm.nih.gov/favicon.ico" /><meta name="ncbi_phid" content="CE8E4A777C7FE081000000000025001F.m_6" />
<meta name='referrer' content='origin-when-cross-origin'/><link type="text/css" rel="stylesheet" href="//static.pubmed.gov/portal/portal3rc.fcgi/4212054/css/4121862/3974050/3917732/251717/4207989/14534/45193/3534283/4128070/3899350/3360242/3394281/4062871/4005757/3251672.css" /><link type="text/css" rel="stylesheet" href="//static.pubmed.gov/portal/portal3rc.fcgi/4212054/css/3529741.css" media="print" /></head>
<body class=" ResourceListPage">
<div class="grid">
<div class="col twelve_col nomargin shadow">
<!-- System messages like service outage or JS required; this is handled by the TemplateResources portlet -->
<div class="sysmessages">
<noscript>
<p class="nojs">
<strong>Warning:</strong>
The NCBI web site requires JavaScript to function.
<a href="/guide/browsers/#enablejs" title="Learn how to enable JavaScript" target="_blank">more...</a>
</p>
</noscript>
</div>
<!--/.sysmessage-->
<div class="wrap">
<div class="page">
<div xmlns:xi="http://www.w3.org/2001/XInclude">
<xi:include href="http://127.0.0.1/sites/static/header_footer" xpointer="xmlns(x=http://www.w3.org/1999/xhtml) xpointer(//x:div[@id='universal_header'])"></xi:include>
</div>
<!--/.header-->
<div class="header">
<div class="res_logo"><h1 class="img_logo"><a href="/" title="NCBI home">NCBI</a></h1><h2 class="res_tagline">National Center for Biotechnology Information</h2></div>
<div class="search"><form method="get" action="/gquery/"><div class="search_form"><label for="database" class="offscreen_noflow">Search database</label><select id="database"><optgroup label="Recent"><option value="gquery" selected="selected" class="last">All Databases</option></optgroup><optgroup label="All"><option value="gquery">All Databases</option><option value="assembly">Assembly</option><option value="biocollections">Biocollections</option><option value="bioproject">BioProject</option><option value="biosample">BioSample</option><option value="books">Books</option><option value="clinvar">ClinVar</option><option value="cdd">Conserved Domains</option><option value="gap">dbGaP</option><option value="dbvar">dbVar</option><option value="gene">Gene</option><option value="genome">Genome</option><option value="gds">GEO DataSets</option><option value="geoprofiles">GEO Profiles</option><option value="gtr">GTR</option><option value="ipg">Identical Protein Groups</option><option value="medgen">MedGen</option><option value="mesh">MeSH</option><option value="nlmcatalog">NLM Catalog</option><option value="nuccore">Nucleotide</option><option value="omim">OMIM</option><option value="pmc">PMC</option><option value="protein">Protein</option><option value="proteinclusters">Protein Clusters</option><option value="protfam">Protein Family Models</option><option value="pcassay">PubChem BioAssay</option><option value="pccompound">PubChem Compound</option><option value="pcsubstance">PubChem Substance</option><option value="pubmed">PubMed</option><option value="snp">SNP</option><option value="sra">SRA</option><option value="structure">Structure</option><option value="taxonomy">Taxonomy</option><option value="toolkit">ToolKit</option><option value="toolkitall">ToolKitAll</option><option value="toolkitbookgh">ToolKitBookgh</option></optgroup></select><div class="nowrap"><label for="term" class="offscreen_noflow" accesskey="/">Search term</label><div class="nowrap"><input type="text" name="term" id="term" title="Search All Databases" value="" class="jig-ncbiclearbutton jig-ncbiautocomplete" data-jigconfig="isEnabled:false,disableUrl:'NcbiSearchBarAutoComplCtrl'" autocomplete="off" data-sbconfig="ds:'no',pjs:'no',afs:'yes'" /></div><button id="search" type="submit" class="button_search nowrap" cmd="go">Search</button></div></div></form></div>
</div>
<div class="nav_and_browser">
</div>
<!-- was itemctrl -->
<div class="container">
<div id="maincontent" class="content col twelve_col last">
<div class="col1">
<div class="col1inner">
<div id="main">
<div id="resources-by-category" role="main" class="cols2">
<h2>Genomes &amp; Maps</h2>
<div class="jig-ncbitabs" id="tabs">
<ul>
<li>
<a href="#tab-all">All</a>
</li>
<li>
<a href="#databases">Databases</a>
</li>
<li>
<a href="#downloads">Downloads</a>
</li>
<li>
<a href="#submissions">Submissions</a>
</li>
<li>
<a href="#tools">Tools</a>
</li>
<li>
<a href="#howtos">How To</a>
</li>
</ul>
<div id="tab-all" class="tab-tabs"></div>
<div id="databases" class="tab-tabs">
<h3>Databases</h3>
<dl>
<dt>
<a href="/assembly" title="">Assembly</a>
</dt>
<dd><p>
A database providing information on the structure of assembled genomes, assembly names and other meta-data, statistical reports, and links to genomic sequence data.</p>
</dd>
<dt class="featured">
<a href="/bioproject" title="">BioProject (formerly Genome Project)</a>
</dt>
<dd><p>
A collection of genomics, functional genomics, and genetics studies and links to their resulting datasets. This resource describes project scope, material, and objectives and provides a mechanism to retrieve datasets that are often difficult to find due to inconsistent annotation, multiple independent submissions, and the varied nature of diverse data types which are often stored in different databases.</p>
</dd>
<dt class="featured">
<a href="/dbvar" title="">Database of Genomic Structural Variation (dbVar)</a>
</dt>
<dd><p>
The dbVar database has been developed to archive information associated with large scale genomic variation, including large insertions, deletions, translocations and inversions. In addition to archiving variation discovery, dbVar also stores associations of defined variants with phenotype information.</p>
</dd>
<dt class="featured">
<a href="/genome" title="">Genome</a>
</dt>
<dd><p>
Contains sequence and map data from the whole genomes of over 1000 organisms. The genomes represent both completely sequenced organisms and those for which sequencing is in progress. All three main domains of life (bacteria, archaea, and eukaryota) are represented, as well as many viruses, phages, viroids, plasmids, and organelles.</p>
</dd>
<dt>
<a href="/projects/genome/assembly/grc/" title="">Genome Reference Consortium (GRC)</a>
</dt>
<dd><p>
The Genome Reference Consortium (GRC) maintains responsibility for the human and mouse reference genomes. Members consist of The Genome Center at Washington University, the Wellcome Trust Sanger Institute, the European Bioinformatics Institute (EBI) and the National Center for Biotechnology Information (NCBI). The GRC works to correct misrepresented loci and to close remaining assembly gaps. In addition, the GRC seeks to provide alternate assemblies for complex or structurally variant genomic loci. At the GRC website (http://www.genomereference.org), the public can view genomic regions currently under review, report genome-related problems and contact the GRC.</p>
</dd>
<dt>
<a href="/RefSeq/HIVInteractions" title="">HIV-1, Human Protein Interaction Database</a>
</dt>
<dd><p>
A database of known interactions of HIV-1 proteins with proteins from human hosts. It provides annotated bibliographies of published reports of protein interactions, with links to the corresponding PubMed records and sequence data.</p>
</dd>
<dt>
<a href="/genomes/FLU/FLU.html" title="">Influenza Virus</a>
</dt>
<dd><p>
A compilation of data from the NIAID Influenza Genome Sequencing Project and GenBank.  It provides tools for flu sequence analysis, annotation and submission to GenBank. This resource also has links to other flu sequence resources, and publications and general information about flu viruses.</p>
</dd>
<dt>
<a href="/pathogens/" title="">NCBI Pathogen Detection Project</a>
</dt>
<dd><p>
A project involving the collection and analysis of bacterial pathogen genomic sequences originating from food, environmental and patient isolates. Currently, an automated pipeline clusters and identifies sequences supplied primarily by public health laboratories to assist in the investigation of foodborne disease outbreaks and discover potential sources of food contamination.</p>
</dd>
<dt class="featured">
<a href="/nuccore" title="">Nucleotide Database</a>
</dt>
<dd><p>
A collection of nucleotide sequences from several sources, including GenBank, RefSeq, the Third Party Annotation (TPA) database, and PDB. Searching the Nucleotide Database will yield available results from each of its component databases.</p>
</dd>
<dt class="featured">
<a href="/popset" title="">PopSet</a>
</dt>
<dd><p>
Database of related DNA sequences that originate from comparative studies: phylogenetic, population, environmental and, to a lesser degree, mutational. Each record in the database is a set of DNA sequences. For example, a population set provides information on genetic variation within an organism, while a phylogenetic set may contain sequences, and their alignment, of a single gene obtained from several related organisms.</p>
</dd>
<dt>
<a href="/probe" title="">Probe</a>
</dt>
<dd><p>
A public registry of nucleic acid reagents designed for use in a wide variety of biomedical research applications, together with information on reagent distributors, probe effectiveness, and computed sequence similarities.</p>
</dd>
<dt>
<a href="/retroviruses/" title="">Retrovirus Resources</a>
</dt>
<dd><p>
A collection of resources specifically designed to support the research of retroviruses, including a genotyping tool that uses the BLAST algorithm to identify the genotype of a query sequence; an alignment tool for global alignment of multiple sequences; an HIV-1 automatic sequence annotation tool; and annotated maps of numerous retroviruses viewable in GenBank, FASTA, and graphic formats, with links to associated sequence records.</p>
</dd>
<dt>
<a href="/genomes/SARS/SARS.html" title="">SARS CoV</a>
</dt>
<dd><p>
A summary of data for the SARS coronavirus (CoV), including links to the most recent sequence data and publications, links to other SARS related resources, and a pre-computed alignment of genome sequences from various isolates.</p>
</dd>
<dt class="featured">
<a href="/Traces/sra/sra.cgi?" title="">Sequence Read Archive (SRA)</a>
</dt>
<dd><p>
The Sequence Read Archive (SRA) stores sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome Analyzer®, Life Technologies AB SOLiD System®, Helicos Biosciences Heliscope®, Complete Genomics®, and Pacific Biosciences SMRT®.</p>
</dd>
<dt class="featured">
<a href="/Traces/trace.cgi" title="">Trace Archive</a>
</dt>
<dd><p>
A repository of DNA sequence chromatograms (traces), base calls, and quality estimates for single-pass reads from various large-scale sequencing projects.</p>
</dd>
<dt>
<a href="/genomes/GenomesHome.cgi?" title="">Viral Genomes</a>
</dt>
<dd><p>
A wide range of resources, including a brief summary of the biology of viruses, links to viral genome sequences in Entrez Genome, and information about viral Reference Sequences, a collection of reference sequences for thousands of viral genomes.</p>
</dd>
<dt>
<a href="/genomes/VirusVariation/" title="">Virus Variation</a>
</dt>
<dd><p>
An extension of the Influenza Virus Resource to other organisms, providing an interface to download sequence sets of selected viruses, analysis tools, including virus-specific BLAST pages, and genome annotation pipelines.</p>
</dd>
</dl>
</div>
<div id="downloads" class="tab-tabs">
<h3>Downloads</h3>
<dl>
<dt>
<a href="https://ftp.ncbi.nlm.nih.gov/genomes/" title="">FTP: Genome</a>
</dt>
<dd><p>
This site contains genome sequence and mapping data for organisms in Entrez Genome. The data are organized in directories for single species or groups of species. Mapping data are collected in the directory MapView and are organized by species. See the README file in the root directory and the README files in the species subdirectories for detailed information.</p>
</dd>
<dt>
<a href="https://ftp.ncbi.nlm.nih.gov/genomes/MapView" title="">FTP: Genome Mapping Data</a>
</dt>
<dd><p>
Contains directories for each genome that include available mapping data for current and previous builds of that genome.</p>
</dd>
<dt>
<a href="https://ftp.ncbi.nlm.nih.gov/refseq/release/" title="">FTP: RefSeq</a>
</dt>
<dd><p>
This site contains all nucleotide and protein sequence records in the Reference Sequence (RefSeq) collection. The ""release"" directory contains the most current release of the complete collection, while data for selected organisms (such as human, mouse and rat) are available in separate directories. Data are available in FASTA and flat file formats. See the README file for details.</p>
</dd>
<dt>
<a href="https://ftp.ncbi.nlm.nih.gov/sky-cgh/" title="">FTP: SKY/M-Fish and CGH Data</a>
</dt>
<dd><p>
This site contains SKY-CGH data in ASN.1, XML and EasySKYCGH formats. See the skycghreadme.txt file for more information.</p>
</dd>
<dt>
<a href="/Traces/sra/sra.cgi?cmd=show&amp;f=faspftp_runs_v1&amp;m=downloads&amp;s=download_sra" title="">FTP: Sequence Read Archive (SRA) Download Facility</a>
</dt>
<dd><p>
This site contains next-generation sequencing data organized by the submitted sequencing project.</p>
</dd>
<dt>
<a href="https://ftp.ncbi.nlm.nih.gov/pub/TraceDB" title="">FTP: Trace Archive</a>
</dt>
<dd><p>
This site contains the trace chromatogram data organized by species. Data include chromatogram, quality scores, FASTA sequences from automatic base calls, and other ancillary information in tab-delimited text as well as XML formats. See the README file for details.</p>
</dd>
<dt>
<a href="https://ftp.ncbi.nlm.nih.gov/genbank/wgs" title="">FTP: Whole Genome Shotgun Sequences</a>
</dt>
<dd><p>
This site contains whole genome shotgun sequence data organized by the 4-digit project code. Data include GenBank and GenPept flat files, quality scores and summary statistics. See the README.genbank.wgs file for more information.</p>
</dd>
</dl>
</div>
<div id="submissions" class="tab-tabs">
<h3>Submissions</h3>
<dl>
<dt>
<a href="https://submit.ncbi.nlm.nih.gov/subs/bioproject/" title="">BioProject Submission</a>
</dt>
<dd><p>
An online form that provides an interface for researchers, consortia and organizations to register their BioProjects. This serves as the starting point for the submission of genomic and genetic data for the study. The data does not need to be submitted at the time of BioProject registration.</p>
</dd>
<dt class="featured">
<a href="/genbank/tbl2asn2.html" title="">GenBank: tbl2asn</a>
</dt>
<dd><p>
A command-line program that automates the creation of sequence records for submission to GenBank using many of the same functions as Sequin. It is used primarily for submission of complete genomes and large batches of sequences.</p>
</dd>
<dt>
<a href="/Traces/sra_sub/sub.cgi?" title="">Sequence Read Archive Submission</a>
</dt>
<dd><p>
This link describes how submitters of SRA data can obtain a secure NCBI FTP site for their data, and also describes the allowed data formats and directory structures.</p>
</dd>
<dt>
<a href="https://submit.ncbi.nlm.nih.gov" title="">Submission Portal</a>
</dt>
<dd><p>
A single entry point for submitters to link to and find information about all of the data submission processes at NCBI. Currently, this serves as an interface for the registration of BioProjects and BioSamples and submission of data for WGS and GTR. Future additions to this site are planned.</p>
</dd>
<dt>
<a href="/Traces/trace.cgi?cmd=show&amp;f=submit&amp;m=doc&amp;s=submit" title="">Trace Archive Submission</a>
</dt>
<dd><p>
This link describes how submitters of trace data can obtain a secure NCBI FTP site for their data, and also describes the allowed data formats and directory structures.</p>
</dd>
</dl>
</div>
<div id="tools" class="tab-tabs">
<h3>Tools</h3>
<dl>
<dt>
<a href="https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastSearch&amp;PROG_DEF=blastn&amp;BLAST_PROG_DEF=megaBlast&amp;SHOW_DEFAULTS=on&amp;BLAST_SPEC=MicrobialGenomes" title="">BLAST Microbial Genomes</a>
</dt>
<dd><p>
Performs a BLAST search for similar sequences from selected complete eukaryotic and prokaryotic genomes.</p>
</dd>
<dt>
<a href="https://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastn&amp;BLAST_PROGRAMS=megaBlast&amp;PAGE_TYPE=BlastSearch&amp;SHOW_DEFAULTS=on&amp;BLAST_SPEC=RefseqGene" title="">BLAST RefSeqGene</a>
</dt>
<dd><p>
Performs a BLAST search of the genomic sequences in the <a href="https://www.ncbi.nlm.nih.gov/refseq/rsg/">RefSeqGene</a>/LRG set. The default display provides ready navigation to review alignments in the Graphics display.</p>
</dd>
<dt>
<a href="/genome/cgv" title="">Comparative Genome Viewer (CGV)</a>
</dt>
<dd><p>Compare genomes based on whole genome assembly-assembly alignments</p>
</dd>
<dt>
<a href="/blast/Blast.cgi" title="">Genome BLAST</a>
</dt>
<dd><p>
This tool compares nucleotide or protein sequences to genomic sequence databases and calculates the statistical significance of matches using the Basic Local Alignment Search Tool (BLAST) algorithm.</p>
</dd>
<dt>
<a href="/genome/gdv" title="">Genome Data Viewer (GDV)</a>
</dt>
<dd><p>
A genome browser for interactive navigation of eukaryotic RefSeq genome assemblies with comprehensive inspection of gene, expression, variation and other annotations. GDV offers easy-to-load analytical track pre-configurations, a menu of data tracks for easy display and customization, and supports upload and analysis of user data. This browser also enables the production of displays for publishing.</p>
</dd>
<dt>
<a href="/mcgv" title="">Multiple Comparative Genome Viewer (MCGV)</a>
</dt>
<dd><p>MCGV is a graphical display for whole genome multiple sequence alignments.</p>
</dd>
<dt>
<a href="/gap/PheGenI " title="">Phenotype-Genotype Integrator (PheGenI) </a>
</dt>
<dd><p>
Supports finding human phenotype/genotype relationships with queries by phenotype, chromosome location, gene, and SNP identifiers. Currently includes information from dbGaP, the NHGRI GWAS Catalog, and GTeX. Displays results on the genome, on sequence, or in tables for download.</p>
</dd>
<dt class="featured">
<a href="/sutils/static/prosplign/prosplign.html" title="">ProSplign</a>
</dt>
<dd><p>
A utility for computing alignment of proteins to genomic nucleotide sequence. It is based on a variation of the Needleman Wunsch global alignment algorithm and specifically accounts for introns and splice signals. Due to this algorithm, ProSplign is accurate in determining splice sites and tolerant to sequencing errors.</p>
</dd>
<dt>
<a href="/projects/sviewer/" title="">Sequence Viewer</a>
</dt>
<dd><p>
Provides a configurable graphical display of a nucleotide or protein sequence and features that have been annotated on that sequence. In addition to use on NCBI sequence database pages, this viewer is available as an embeddable webpage component. <a href="/projects/sviewer/embedded.html">Detailed documentation</a> including an API Reference guide is available for developers wishing to embed the viewer in their own pages.</p>
</dd>
<dt class="featured">
<a href="/sutils/splign" title="">Splign</a>
</dt>
<dd><p>
A utility for computing cDNA-to-Genomic sequence alignments. It is based on a variation of the Needleman-Wunsch global alignment algorithm and specifically accounts for introns and splice signals. Due to this algorithm, Splign is accurate in determining splice sites and tolerant to sequencing errors.</p>
</dd>
<dt>
<a href="/variation/view" title="">Variation Viewer</a>
</dt>
<dd>A genomic browser to search and view genomic variations listed in dbSNP, dbVar, and ClinVar databases. Searches can be performed using chromosomal location, gene symbol, phenotype, or variant IDs from dbSNP and dbVar. The browser enables exploration of results in a dynamic graphical sequence viewer with annotated tables of variations.</dd>
<dt>
<a href="/projects/genotyping/formpage.cgi" title="">Viral Genotyping Tool</a>
</dt>
<dd><p>
This tool helps identify the genotype of a viral sequence. A window is slid along the query sequence and each window is compared by BLAST to each of the reference sequences for a particular virus.</p>
</dd>
</dl>
</div>
<div id="howtos" class="tab-tabs">
<h3>How To</h3>
<ul>
<li>
<a href="/guide/howto/submit-data">Submit data to NCBI</a>
</li>
<li>
<a href="/guide/howto/submit-sequence-data">Submit sequence data to NCBI</a>
</li>
<li>
<a href="/guide/howto/microbe-genome-homologs">Compare protein homologs between two microbial genomes</a>
</li>
<li>
<a href="/guide/howto/dwn-genome">Download the complete genome for an organism</a>
</li>
<li>
<a href="/guide/howto/all-genome-projects">Find sequenced genomes, including those in progress, for a taxonomic group</a>
</li>
</ul>
</div>
</div>
</div>
<div id="qlinks">
<div class="portlet">
<h3>Quick Links</h3>
<ul style="font-size: 90%;">
<li>
<a href="/bioproject">BioProject (formerly Genome Project)</a>
</li>
<li>
<a href="/dbvar">Database of Genomic Structural Variation (dbVar)</a>
</li>
<li>
<a href="/genome">Genome</a>
</li>
<li>
<a href="/nuccore">Nucleotide Database</a>
</li>
<li>
<a href="/popset">PopSet</a>
</li>
<li>
<a href="/Traces/sra/sra.cgi?">Sequence Read Archive (SRA)</a>
</li>
<li>
<a href="/Traces/trace.cgi">Trace Archive</a>
</li>
<li>
<a href="/genbank/tbl2asn2.html">GenBank: tbl2asn</a>
</li>
<li>
<a href="/sutils/static/prosplign/prosplign.html">ProSplign</a>
</li>
<li>
<a href="/sutils/splign">Splign</a>
</li>
</ul>
</div>
</div>
</div>
</div>
</div>
<!--/.col1-->
<div class="col2">
<div id="gd-lcl-nav" class="gd-lcl-nav-howto" role="navigation"><ul><li class="first"><a href="/" class="homelink">NCBI Home</a></li><li class="before-divide"><a class="homelink" href="/guide/sitemap/">Resource List (A-Z)</a></li><li class="nav-divide"></li><li><a href="/guide/all/">All Resources</a></li><li><a href="/guide/chemicals-bioassays/">Chemicals &amp; Bioassays</a></li><li><a href="/guide/data-software/">Data &amp; Software</a></li><li><a href="/guide/dna-rna/">DNA &amp; RNA</a></li><li><a href="/guide/domains-structures/">Domains &amp; Structures</a></li><li><a href="/guide/genes-expression/">Genes &amp; Expression</a></li><li><a href="/guide/genetics-medicine/">Genetics &amp; Medicine</a></li><li class="current"><a href="/guide/genomes-maps/">Genomes &amp; Maps</a></li><li><a href="/guide/homology/">Homology</a></li><li><a href="/guide/literature/">Literature</a></li><li><a href="/guide/proteins/">Proteins</a></li><li><a href="/guide/sequence-analysis/">Sequence Analysis</a></li><li><a href="/guide/taxonomy/">Taxonomy</a></li><li><a href="/guide/training-tutorials/">Training &amp; Tutorials</a></li><li><a href="/guide/variation/">Variation</a></li></ul></div>
</div>
<!--/.col2-->
<div class="col3">
</div>
<!--/.col3-->
<div class="col4">
</div>
<!--/.col4-->
<div class="col5">
</div>
<div class="col6">
</div>
<div class="col7">
</div>
<div class="col8">
</div>
<div class="col9">
</div>
</div><!--/.content-->
</div><!--/.container-->
<div id="NCBIFooter_dynamic">
<!--<component id="NCBIBreadcrumbs"/>
<component id="NCBIHelpDesk"/>-->
<noscript><img alt="" src="/stat?jsdisabled=true&amp;ncbi_app=guide&amp;ncbi_db=&amp;ncbi_pdid=ResourceListPage&amp;ncbi_phid=CE8E4A777C7FE081000000000025001F" /></noscript>
</div>
<div xmlns:xi="http://www.w3.org/2001/XInclude">
<xi:include href="http://127.0.0.1/sites/static/header_footer" xpointer="xmlns(x=http://www.w3.org/1999/xhtml) xpointer(//x:div[@id='footer'])"></xi:include>
</div>
<!--/.footer-->
</div>
<!--/.page-->
</div>
<!--/.wrap-->
<span class="PAFAppResources"></span>
</div><!-- /.twelve_col -->
</div>
<!-- /.grid -->
<!-- usually for JS scripts at page bottom -->
<span class="pagefixtures"></span>
<!-- CE8B5AF87C7FFCB1_0191SID /projects/Guide/Guide2@1.28 portal107 v4.1.r689238 Tue, Oct 22 2024 16:10:51 -->
<span id="portal-csrf-token" style="display:none" data-token="CE8B5AF87C7FFCB1_0191SID"></span>
<script type="text/javascript" src="//static.pubmed.gov/portal/portal3rc.fcgi/4212054/js/3879255/4121861/4013174/3928943/3391854/4212053.js" snapshot="guide"></script></body>
</html>