109 lines
5.7 KiB
HTML
109 lines
5.7 KiB
HTML
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<title>Requirements for GenBank Submissions through BankIt</title>
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<dt><a href="/" title="NCBI Home">National Center for Biotechnology Information</a></dt>
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<li><a href="#">Home</a></li>
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<h1>Requirements for GenBank Submissions through BankIt</h1>
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<p>
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<ul>
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<li>Contact Information</li>
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<ul>
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<li>Name, address, phone number, fax number and email address of the
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submitter must be entered when registering and submitting for the
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first time</li>
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<li>Subsequent BankIt submissions will retain this information and
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display it once the submitter logs in</li>
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</ul>
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<li>Release date information</li>
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<ul>
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<li>Immediately after it is processed at NCBI OR</li>
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<li>On a date the submitter specifies</li>
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</ul>
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<li>Reference information</li>
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<ul>
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<li>Sequence authors: names of the researchers who are credited with the sequence</li>
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<li>Publication information: Unpublished, In-Press, or Published; and applicable citation information (paper's title, authors, journal title, volume, issue, year, pages)</li>
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</ul>
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<li>Submission Category and Type</li>
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<ul>
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<li>Original sequencing or Third Party Annotation</li>
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<li>Single sequence, sequence set (phylogenetic, population, environmental, etc), or batch</li>
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</ul>
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<li>Nucleotide sequence(s)</li>
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<ul>
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<li>Input (cut-and-paste) single or multiple sequences OR</li>
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<li>Upload them as a <a href="help/fasta.html">FASTA</a> file; FASTA files should include organisms in their definition lines</li>
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<li>Sequences must be at least 200 nucleotides long (unless they are complete exons, non-coding RNAs (ncRNAs), microsatellites or ancient DNA)</li>
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<li>Molecule type: what was sequenced? (genomic DNA, mRNA, genomic RNA, cRNA, etc)</li>
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<li>Topology: linear or circular (circular must be complete, such as a complete plasmid)</li>
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</ul>
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<li>Organism name, applicable source modifiers, location</li>
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<ul>
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<li>Genus and species names (if not previously provided in FASTA file)</li>
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<li>If name is new or unrecognized, provide best known taxonomic lineage</li>
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<li>If genus and/or species names are not known, provide most specific name known (for example:Bacillus sp., Uncultured bacterium, Uncultured archaeon)</li>
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<li>Most complete name for any synthetic vector (for example: Cloning vector pAB234, Transfer vector p789Abc)</li>
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<li>Source modifiers include: strain, clone, isolate, specimen-voucher, isolation-source, country</li>
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<li>Location: organelle (mitochondrion, chloroplast, etc); map and/or chromosome</li>
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</ul>
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<li>Features of the sequence</li>
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<ul>
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<li>Upload <a href="help/feature-table.html">files</a> or use input forms to add all applicable features (for example: CDS, gene, rRNA, tRNA, microsatellite, exon, intron)</li>
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