61 lines
3.6 KiB
Text
61 lines
3.6 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs5290/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs5290
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#Current Build 156
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#Released October 16, 2022
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#Organism Homo sapiens
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#Position chr8:142876370 (GRCh38.p14)
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#Alleles A>C / A>G
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 A=0.996177 G=0.003823 PRJNA400167
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gnomAD - Exomes Global Study-wide 251074 A=0.999108 G=0.000892 PRJNA398795 SAMN07488253
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gnomAD - Exomes European Sub 135170 A=0.999978 G=0.000022 SAMN10181265
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gnomAD - Exomes Asian Sub 48932 A=0.99998 G=0.00002
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gnomAD - Exomes American Sub 34548 A=0.99948 G=0.00052 SAMN07488255
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gnomAD - Exomes African Sub 16218 A=0.98773 G=0.01227 SAMN07488254
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gnomAD - Exomes Ashkenazi Jewish Sub 10078 A=1.00000 G=0.00000 SAMN07488252
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gnomAD - Exomes Other Sub 6128 A=0.9995 G=0.0005 SAMN07488248
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gnomAD - Genomes Global Study-wide 140272 A=0.996621 G=0.003379 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75948 A=0.99992 G=0.00008 SAMN10181265
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gnomAD - Genomes African Sub 42050 A=0.98932 G=0.01068 SAMN07488254
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gnomAD - Genomes American Sub 13664 A=0.99912 G=0.00088 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3322 A=1.0000 G=0.0000 SAMN07488252
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gnomAD - Genomes East Asian Sub 3134 A=1.0000 G=0.0000 SAMN07488251
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gnomAD - Genomes Other Sub 2154 A=0.9968 G=0.0032 SAMN07488248
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ExAC Global Study-wide 115270 A=0.998855 G=0.001145 PRJEB8661 SAMN07490465
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ExAC Europe Sub 69638 A=0.99996 G=0.00004
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ExAC Asian Sub 23896 A=1.00000 G=0.00000
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ExAC American Sub 10914 A=0.99936 G=0.00064
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ExAC African Sub 9980 A=0.9879 G=0.0121
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ExAC Other Sub 842 A=0.999 G=0.001 SAMN07486028
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Allele Frequency Aggregator Total Global 44790 A=0.99908 G=0.00092 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 32784 A=0.99994 G=0.00006 SAMN10492695
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Allele Frequency Aggregator Other Sub 7052 A=0.9996 G=0.0004 SAMN11605645
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Allele Frequency Aggregator African Sub 3560 A=0.9902 G=0.0098 SAMN10492703
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Allele Frequency Aggregator Latin American 2 Sub 628 A=1.000 G=0.000 SAMN10492700
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Allele Frequency Aggregator Latin American 1 Sub 500 A=0.998 G=0.002 SAMN10492699
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Allele Frequency Aggregator Asian Sub 168 A=1.000 G=0.000 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 98 A=1.00 G=0.00 SAMN10492702
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GO Exome Sequencing Project Global Study-wide 13006 A=0.99646 G=0.00354 PRJNA192955
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GO Exome Sequencing Project European American Sub 8600 A=1.0000 G=0.0000
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GO Exome Sequencing Project African American Sub 4406 A=0.9896 G=0.0104
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1000Genomes_30x Global Study-wide 6404 A=0.9967 G=0.0033 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 A=0.9894 G=0.0106 SAMN07486022
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1000Genomes_30x Europe Sub 1266 A=1.0000 G=0.0000 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 A=1.0000 G=0.0000 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 A=1.0000 G=0.0000 SAMN07486024
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1000Genomes_30x American Sub 980 A=0.998 G=0.002 SAMN07488242
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1000Genomes Global Study-wide 5008 A=0.9964 G=0.0036 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 A=0.9871 G=0.0129 SAMN07486022
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1000Genomes East Asian Sub 1008 A=1.0000 G=0.0000 SAMN07486024
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1000Genomes Europe Sub 1006 A=1.0000 G=0.0000 SAMN07488239
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1000Genomes South Asian Sub 978 A=1.000 G=0.000 SAMN07486027
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1000Genomes American Sub 694 A=0.999 G=0.001 SAMN07488242
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HapMap Global Study-wide 206 A=0.981 G=0.019 PRJNA60817 SAMN10820145
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HapMap African Sub 120 A=0.967 G=0.033 SAMN10821181
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HapMap Asian Sub 86 A=1.00 G=0.00 SAMN10821184
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SGDP_PRJ Global Study-wide 2 A=0.5 G=0.5 PRJNA586841
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