65 lines
4.2 KiB
Text
65 lines
4.2 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs3799196/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs3799196
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#Current Build 156
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#Released October 13, 2022
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#Organism Homo sapiens
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#Position chr6:2968811 (GRCh38.p14)
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#Alleles T>C
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 T=0.985126 C=0.014874 PRJNA400167
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gnomAD - Genomes Global Study-wide 140258 T=0.985420 C=0.014580 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75942 T=0.98287 C=0.01713 SAMN10181265
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gnomAD - Genomes African Sub 42046 T=0.99586 C=0.00414 SAMN07488254
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gnomAD - Genomes American Sub 13662 T=0.96377 C=0.03623 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3322 T=0.9883 C=0.0117 SAMN07488252
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gnomAD - Genomes East Asian Sub 3132 T=0.9971 C=0.0029 SAMN07488251
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gnomAD - Genomes Other Sub 2154 T=0.9875 C=0.0125 SAMN07488248
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Allele Frequency Aggregator Total Global 33074 T=0.98473 C=0.01527 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 26358 T=0.98456 C=0.01544 SAMN10492695
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Allele Frequency Aggregator African Sub 4286 T=0.9960 C=0.0040 SAMN10492703
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Allele Frequency Aggregator Other Sub 1264 T=0.9802 C=0.0198 SAMN11605645
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Allele Frequency Aggregator Latin American 2 Sub 738 T=0.944 C=0.056 SAMN10492700
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Allele Frequency Aggregator Latin American 1 Sub 178 T=0.972 C=0.028 SAMN10492699
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Allele Frequency Aggregator Asian Sub 134 T=1.000 C=0.000 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 116 T=0.914 C=0.086 SAMN10492702
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14KJPN JAPANESE Study-wide 28258 T=0.99720 C=0.00280 PRJNA678214 SAMN16789458
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8.3KJPN JAPANESE Study-wide 16760 T=0.99660 C=0.00340 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 T=0.9775 C=0.0225 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 T=0.9994 C=0.0006 SAMN07486022
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1000Genomes_30x Europe Sub 1266 T=0.9866 C=0.0134 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 T=0.9260 C=0.0740 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 T=0.9991 C=0.0009 SAMN07486024
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1000Genomes_30x American Sub 980 T=0.963 C=0.037 SAMN07488242
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1000Genomes Global Study-wide 5008 T=0.9784 C=0.0216 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 T=0.9992 C=0.0008 SAMN07486022
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1000Genomes East Asian Sub 1008 T=0.9990 C=0.0010 SAMN07486024
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1000Genomes Europe Sub 1006 T=0.9861 C=0.0139 SAMN07488239
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1000Genomes South Asian Sub 978 T=0.930 C=0.070 SAMN07486027
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1000Genomes American Sub 694 T=0.965 C=0.035 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.9821 C=0.0179 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.9826 C=0.0174 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.9865 C=0.0135 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2922 T=0.9935 C=0.0065 PRJNA589833
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Korean Genome Project KOREAN Study-wide 1832 T=0.9940 C=0.0060 PRJNA609628
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HapMap Global Study-wide 1138 T=0.9798 C=0.0202 PRJNA60817 SAMN10820145
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HapMap American Sub 672 T=0.967 C=0.033 SAMN10821182
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HapMap Europe Sub 176 T=0.994 C=0.006 SAMN10821183
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HapMap Asian Sub 170 T=1.000 C=0.000 SAMN10821184
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HapMap African Sub 120 T=1.000 C=0.000 SAMN10821181
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Genome-wide autozygosity in Daghestan Global Study-wide 1130 T=0.9823 C=0.0177 PRJNA576826 SAMN13013121
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Genome-wide autozygosity in Daghestan Daghestan Sub 624 T=0.987 C=0.013 SAMN13013126
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Genome-wide autozygosity in Daghestan Near_East Sub 144 T=0.979 C=0.021 SAMN13013123
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Genome-wide autozygosity in Daghestan Central Asia Sub 122 T=0.984 C=0.016 SAMN13013124
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Genome-wide autozygosity in Daghestan Europe Sub 106 T=1.000 C=0.000 SAMN13013127
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Genome-wide autozygosity in Daghestan South Asian Sub 98 T=0.93 C=0.07 SAMN13013122
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Genome-wide autozygosity in Daghestan Caucasus Sub 36 T=1.00 C=0.00 SAMN13013125
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.980 C=0.020 PRJEB5829 SAMN13000132
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Northern Sweden ACPOP Study-wide 600 T=0.988 C=0.012 PPRJNA503394 SAMN10359154
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Qatari Global Study-wide 216 T=0.995 C=0.005 PRJNA288297 SAMN13019808
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SGDP_PRJ Global Study-wide 30 T=0.50 C=0.50 PRJNA586841
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Siberian Global Study-wide 2 T=0.5 C=0.5 PRJNA267856 SAMN13113809
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