90 lines
6.1 KiB
Text
90 lines
6.1 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs264/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs264
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#Current Build 156
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#Released October 14, 2022
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#Organism Homo sapiens
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#Position chr8:19955669 (GRCh38.p14)
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#Alleles G>A
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 18 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 G=0.856897 A=0.143103 PRJNA400167
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Allele Frequency Aggregator Total Global 231258 G=0.851798 A=0.148202 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 198328 G=0.854781 A=0.145219 SAMN10492695
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Allele Frequency Aggregator Other Sub 11168 G=0.83677 A=0.16323 SAMN11605645
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Allele Frequency Aggregator African Sub 8132 G=0.8695 A=0.1305 SAMN10492703
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Allele Frequency Aggregator Asian Sub 6368 G=0.7918 A=0.2082 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 5140 G=0.8204 A=0.1796 SAMN10492702
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Allele Frequency Aggregator Latin American 2 Sub 1572 G=0.8302 A=0.1698 SAMN10492700
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Allele Frequency Aggregator Latin American 1 Sub 550 G=0.869 A=0.131 SAMN10492699
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gnomAD - Genomes Global Study-wide 139938 G=0.860445 A=0.139555 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75816 G=0.86255 A=0.13745 SAMN10181265
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gnomAD - Genomes African Sub 41916 G=0.87201 A=0.12799 SAMN07488254
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gnomAD - Genomes American Sub 13624 G=0.83852 A=0.16148 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3322 G=0.8128 A=0.1872 SAMN07488252
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gnomAD - Genomes East Asian Sub 3120 G=0.7994 A=0.2006 SAMN07488251
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gnomAD - Genomes Other Sub 2140 G=0.8621 A=0.1379 SAMN07488248
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The PAGE Study Global Study-wide 78698 G=0.85782 A=0.14218 PRJNA168052 SAMN10868975
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The PAGE Study AfricanAmerican Sub 32514 G=0.87122 A=0.12878 SAMN10868721
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The PAGE Study Mexican Sub 10810 G=0.84921 A=0.15079 SAMN10868735
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The PAGE Study Asian Sub 8318 G=0.8012 A=0.1988 SAMN10868722
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The PAGE Study PuertoRican Sub 7918 G=0.8704 A=0.1296 SAMN10868968
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The PAGE Study NativeHawaiian Sub 4534 G=0.8736 A=0.1264 SAMN10868777
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The PAGE Study Cuban Sub 4230 G=0.8496 A=0.1504 SAMN10868733
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The PAGE Study Dominican Sub 3828 G=0.8777 A=0.1223 SAMN10868734
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The PAGE Study CentralAmerican Sub 2450 G=0.8408 A=0.1592 SAMN10868729
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The PAGE Study SouthAmerican Sub 1980 G=0.8525 A=0.1475 SAMN10868969
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The PAGE Study NativeAmerican Sub 1260 G=0.8540 A=0.1460 SAMN10868739
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The PAGE Study SouthAsian Sub 856 G=0.826 A=0.174 SAMN10868970
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14KJPN JAPANESE Study-wide 28258 G=0.78725 A=0.21275 PRJNA678214 SAMN16789458
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8.3KJPN JAPANESE Study-wide 16760 G=0.78437 A=0.21563 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 G=0.8367 A=0.1633 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 G=0.8869 A=0.1131 SAMN07486022
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1000Genomes_30x Europe Sub 1266 G=0.8381 A=0.1619 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 G=0.8220 A=0.1780 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 G=0.7658 A=0.2342 SAMN07486024
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1000Genomes_30x American Sub 980 G=0.846 A=0.154 SAMN07488242
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1000Genomes Global Study-wide 5008 G=0.8399 A=0.1601 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 G=0.8933 A=0.1067 SAMN07486022
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1000Genomes East Asian Sub 1008 G=0.7669 A=0.2331 SAMN07486024
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1000Genomes Europe Sub 1006 G=0.8509 A=0.1491 SAMN07488239
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1000Genomes South Asian Sub 978 G=0.821 A=0.179 SAMN07486027
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1000Genomes American Sub 694 G=0.854 A=0.146 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.8705 A=0.1295 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.8550 A=0.1450 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.8552 A=0.1448 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2930 G=0.7939 A=0.2061 PRJNA589833
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HGDP-CEPH-db Supplement 1 Global Study-wide 2084 G=0.8340 A=0.1660 PRJEB6463
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HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 G=0.764 A=0.236 SAMN13169023
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HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 G=0.867 A=0.133 SAMN13169022
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HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 G=0.880 A=0.120 SAMN13169025
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HGDP-CEPH-db Supplement 1 Europe Sub 320 G=0.769 A=0.231 SAMN13169024
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HGDP-CEPH-db Supplement 1 Africa Sub 242 G=0.955 A=0.045 SAMN13169020
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HGDP-CEPH-db Supplement 1 America Sub 216 G=0.875 A=0.125 SAMN13169021
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HGDP-CEPH-db Supplement 1 Oceania Sub 72 G=0.64 A=0.36 SAMN13169026
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HapMap Global Study-wide 1892 G=0.8610 A=0.1390 PRJNA60817 SAMN10820145
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HapMap American Sub 770 G=0.840 A=0.160 SAMN10821182
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HapMap African Sub 692 G=0.921 A=0.079 SAMN10821181
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HapMap Asian Sub 254 G=0.783 A=0.217 SAMN10821184
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HapMap Europe Sub 176 G=0.830 A=0.170 SAMN10821183
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Korean Genome Project KOREAN Study-wide 1832 G=0.8073 A=0.1927 PRJNA609628
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Genome-wide autozygosity in Daghestan Global Study-wide 1110 G=0.8523 A=0.1477 PRJNA576826 SAMN13013121
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Genome-wide autozygosity in Daghestan Daghestan Sub 620 G=0.897 A=0.103 SAMN13013126
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Genome-wide autozygosity in Daghestan Near_East Sub 144 G=0.875 A=0.125 SAMN13013123
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Genome-wide autozygosity in Daghestan Central Asia Sub 118 G=0.814 A=0.186 SAMN13013124
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Genome-wide autozygosity in Daghestan Europe Sub 108 G=0.824 A=0.176 SAMN13013127
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Genome-wide autozygosity in Daghestan South Asian Sub 84 G=0.60 A=0.40 SAMN13013122
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Genome-wide autozygosity in Daghestan Caucasus Sub 36 G=0.81 A=0.19 SAMN13013125
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.852 A=0.148 PRJEB5829 SAMN13000132
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CNV burdens in cranial meningiomas Global Study-wide 790 G=0.814 A=0.186 PRJEB37584 SAMN15458720
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CNV burdens in cranial meningiomas CRM Sub 790 G=0.814 A=0.186 SAMN15458720
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Northern Sweden ACPOP Study-wide 600 G=0.878 A=0.122 PPRJNA503394 SAMN10359154
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Qatari Global Study-wide 216 G=0.875 A=0.125 PRJNA288297 SAMN13019808
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A Vietnamese Genetic Variation Database Global Study-wide 216 G=0.819 A=0.181 PRJNA515199 SAMN10744005
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SGDP_PRJ Global Study-wide 154 G=0.409 A=0.591 PRJNA586841
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Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 42 G=0.76 A=0.24 PRJEB36033 SAMN15458807
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The Danish reference pan genome Danish Study-wide 40 G=0.85 A=0.15 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 16 G=0.50 A=0.50 PRJNA267856 SAMN13113809
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