73 lines
4.8 KiB
Text
73 lines
4.8 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs256/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs256
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#Current Build 156
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#Released October 14, 2022
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#Organism Homo sapiens
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#Position chr8:19954456 (GRCh38.p14)
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#Alleles C>T
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 2 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 C=0.877902 T=0.122098 PRJNA400167
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Allele Frequency Aggregator Total Global 243892 C=0.855046 T=0.144954 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 217418 C=0.854203 T=0.145797 SAMN10492695
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Allele Frequency Aggregator Other Sub 8290 C=0.8513 T=0.1487 SAMN11605645
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Allele Frequency Aggregator Latin American 2 Sub 6594 C=0.8450 T=0.1550 SAMN10492700
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Allele Frequency Aggregator African Sub 6390 C=0.9423 T=0.0577 SAMN10492703
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Allele Frequency Aggregator Asian Sub 3814 C=0.7787 T=0.2213 SAMN10492704
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Allele Frequency Aggregator Latin American 1 Sub 1026 C=0.8830 T=0.1170 SAMN10492699
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Allele Frequency Aggregator South Asian Sub 360 C=0.817 T=0.183 SAMN10492702
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gnomAD - Genomes Global Study-wide 140192 C=0.880856 T=0.119144 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75934 C=0.86272 T=0.13728 SAMN10181265
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gnomAD - Genomes African Sub 42018 C=0.93724 T=0.06276 SAMN07488254
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gnomAD - Genomes American Sub 13646 C=0.84406 T=0.15594 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3320 C=0.8244 T=0.1756 SAMN07488252
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gnomAD - Genomes East Asian Sub 3122 C=0.7867 T=0.2133 SAMN07488251
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gnomAD - Genomes Other Sub 2152 C=0.8769 T=0.1231 SAMN07488248
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The PAGE Study Global Study-wide 78698 C=0.88852 T=0.11148 PRJNA168052 SAMN10868975
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The PAGE Study AfricanAmerican Sub 32514 C=0.93655 T=0.06345 SAMN10868721
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The PAGE Study Mexican Sub 10808 C=0.85159 T=0.14841 SAMN10868735
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The PAGE Study Asian Sub 8318 C=0.7973 T=0.2027 SAMN10868722
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The PAGE Study PuertoRican Sub 7918 C=0.8836 T=0.1164 SAMN10868968
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The PAGE Study NativeHawaiian Sub 4534 C=0.8712 T=0.1288 SAMN10868777
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The PAGE Study Cuban Sub 4230 C=0.8589 T=0.1411 SAMN10868733
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The PAGE Study Dominican Sub 3828 C=0.9094 T=0.0906 SAMN10868734
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The PAGE Study CentralAmerican Sub 2450 C=0.8510 T=0.1490 SAMN10868729
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The PAGE Study SouthAmerican Sub 1982 C=0.8557 T=0.1443 SAMN10868969
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The PAGE Study NativeAmerican Sub 1260 C=0.8659 T=0.1341 SAMN10868739
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The PAGE Study SouthAsian Sub 856 C=0.825 T=0.175 SAMN10868970
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14KJPN JAPANESE Study-wide 28258 C=0.78339 T=0.21661 PRJNA678214 SAMN16789458
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8.3KJPN JAPANESE Study-wide 16760 C=0.78091 T=0.21909 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 C=0.8546 T=0.1454 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 C=0.9591 T=0.0409 SAMN07486022
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1000Genomes_30x Europe Sub 1266 C=0.8397 T=0.1603 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 C=0.8228 T=0.1772 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 C=0.7513 T=0.2487 SAMN07486024
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1000Genomes_30x American Sub 980 C=0.846 T=0.154 SAMN07488242
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1000Genomes Global Study-wide 5008 C=0.8558 T=0.1442 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 C=0.9599 T=0.0401 SAMN07486022
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1000Genomes East Asian Sub 1008 C=0.7550 T=0.2450 SAMN07486024
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1000Genomes Europe Sub 1006 C=0.8529 T=0.1471 SAMN07488239
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1000Genomes South Asian Sub 978 C=0.823 T=0.177 SAMN07486027
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1000Genomes American Sub 694 C=0.854 T=0.146 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8705 T=0.1295 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8552 T=0.1448 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8557 T=0.1443 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.7904 T=0.2096 PRJNA589833
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Korean Genome Project KOREAN Study-wide 1832 C=0.8057 T=0.1943 PRJNA609628
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.853 T=0.147 PRJEB5829 SAMN13000132
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CNV burdens in cranial meningiomas Global Study-wide 788 C=0.811 T=0.189 PRJEB37584 SAMN15458720
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CNV burdens in cranial meningiomas CRM Sub 788 C=0.811 T=0.189 SAMN15458720
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Northern Sweden ACPOP Study-wide 600 C=0.885 T=0.115 PPRJNA503394 SAMN10359154
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HapMap Global Study-wide 320 C=0.884 T=0.116 PRJNA60817 SAMN10820145
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HapMap African Sub 118 C=0.983 T=0.017 SAMN10821181
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HapMap American Sub 116 C=0.862 T=0.138 SAMN10821182
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HapMap Asian Sub 86 C=0.78 T=0.22 SAMN10821184
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Qatari Global Study-wide 216 C=0.894 T=0.106 PRJNA288297 SAMN13019808
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A Vietnamese Genetic Variation Database Global Study-wide 214 C=0.794 T=0.206 PRJNA515199 SAMN10744005
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SGDP_PRJ Global Study-wide 152 C=0.408 T=0.592 PRJNA586841
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The Danish reference pan genome Danish Study-wide 40 C=0.85 T=0.15 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 16 C=0.50 T=0.50 PRJNA267856 SAMN13113809
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