171 lines
9.9 KiB
Text
171 lines
9.9 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs250/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs250
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#Current Build 156
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#Released October 14, 2022
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#Organism Homo sapiens
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#Position chr8:19953513-19953518 (GRCh38.p14)
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#Alleles dupTG
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#Variation Type Indel (Insertion and Deletion)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_200""
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data-ga-label=""frequency_tt_200"" class=""regularText"">-</a>
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<p id=""frequency_tt_200"" class=""break_values"">No frequency provided</p>
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" dupTG=0.221508 PRJNA400167
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gnomAD - Genomes Global Study-wide 140018 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_188""
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data-ga-label=""frequency_tt_188"" class=""regularText"">-</a>
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<p id=""frequency_tt_188"" class=""break_values"">No frequency provided</p>
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" dupTG=0.211823 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75904 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_193""
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data-ga-label=""frequency_tt_193"" class=""regularText"">-</a>
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<p id=""frequency_tt_193"" class=""break_values"">No frequency provided</p>
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" dupTG=0.12272 SAMN10181265
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gnomAD - Genomes African Sub 41884 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_189""
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data-ga-label=""frequency_tt_189"" class=""regularText"">-</a>
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<p id=""frequency_tt_189"" class=""break_values"">No frequency provided</p>
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" dupTG=0.38096 SAMN07488254
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gnomAD - Genomes American Sub 13640 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_190""
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data-ga-label=""frequency_tt_190"" class=""regularText"">-</a>
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<p id=""frequency_tt_190"" class=""break_values"">No frequency provided</p>
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" dupTG=0.19993 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3320 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_191""
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data-ga-label=""frequency_tt_191"" class=""regularText"">-</a>
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<p id=""frequency_tt_191"" class=""break_values"">No frequency provided</p>
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" dupTG=0.2274 SAMN07488252
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gnomAD - Genomes East Asian Sub 3118 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_192""
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data-ga-label=""frequency_tt_192"" class=""regularText"">-</a>
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<p id=""frequency_tt_192"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1559 SAMN07488251
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gnomAD - Genomes Other Sub 2152 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_194""
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data-ga-label=""frequency_tt_194"" class=""regularText"">-</a>
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<p id=""frequency_tt_194"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1952 SAMN07488248
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14KJPN JAPANESE Study-wide 28258 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_199""
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data-ga-label=""frequency_tt_199"" class=""regularText"">-</a>
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<p id=""frequency_tt_199"" class=""break_values"">No frequency provided</p>
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" dupTG=0.15606 PRJNA678214 SAMN16789458
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Allele Frequency Aggregator Total Global 18594 (TG)3=0.83774 dupTG=0.16226 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 14202 (TG)3=0.88593 dupTG=0.11407 SAMN10492695
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Allele Frequency Aggregator African Sub 2912 (TG)3=0.6216 dupTG=0.3784 SAMN10492703
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Allele Frequency Aggregator Latin American 2 Sub 610 (TG)3=0.838 dupTG=0.162 SAMN10492700
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Allele Frequency Aggregator Other Sub 514 (TG)3=0.761 dupTG=0.239 SAMN11605645
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Allele Frequency Aggregator Latin American 1 Sub 146 (TG)3=0.801 dupTG=0.199 SAMN10492699
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Allele Frequency Aggregator Asian Sub 112 (TG)3=0.786 dupTG=0.214 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 98 (TG)3=0.80 dupTG=0.20 SAMN10492702
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8.3KJPN JAPANESE Study-wide 16760 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_198""
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data-ga-label=""frequency_tt_198"" class=""regularText"">-</a>
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<p id=""frequency_tt_198"" class=""break_values"">No frequency provided</p>
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" dupTG=0.15895 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_179""
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data-ga-label=""frequency_tt_179"" class=""regularText"">-</a>
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<p id=""frequency_tt_179"" class=""break_values"">No frequency provided</p>
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" dupTG=0.2413 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_180""
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data-ga-label=""frequency_tt_180"" class=""regularText"">-</a>
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<p id=""frequency_tt_180"" class=""break_values"">No frequency provided</p>
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" dupTG=0.4227 SAMN07486022
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1000Genomes_30x Europe Sub 1266 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_183""
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data-ga-label=""frequency_tt_183"" class=""regularText"">-</a>
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<p id=""frequency_tt_183"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1501 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_184""
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data-ga-label=""frequency_tt_184"" class=""regularText"">-</a>
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<p id=""frequency_tt_184"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1905 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_182""
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data-ga-label=""frequency_tt_182"" class=""regularText"">-</a>
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<p id=""frequency_tt_182"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1744 SAMN07486024
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1000Genomes_30x American Sub 980 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_181""
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data-ga-label=""frequency_tt_181"" class=""regularText"">-</a>
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<p id=""frequency_tt_181"" class=""break_values"">No frequency provided</p>
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" dupTG=0.170 SAMN07488242
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1000Genomes Global Study-wide 5008 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_173""
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data-ga-label=""frequency_tt_173"" class=""regularText"">-</a>
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<p id=""frequency_tt_173"" class=""break_values"">No frequency provided</p>
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" dupTG=0.2338 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_174""
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data-ga-label=""frequency_tt_174"" class=""regularText"">-</a>
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<p id=""frequency_tt_174"" class=""break_values"">No frequency provided</p>
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" dupTG=0.4115 SAMN07486022
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1000Genomes East Asian Sub 1008 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_176""
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data-ga-label=""frequency_tt_176"" class=""regularText"">-</a>
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<p id=""frequency_tt_176"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1726 SAMN07486024
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1000Genomes Europe Sub 1006 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_177""
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data-ga-label=""frequency_tt_177"" class=""regularText"">-</a>
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<p id=""frequency_tt_177"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1431 SAMN07488239
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1000Genomes South Asian Sub 978 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_178""
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data-ga-label=""frequency_tt_178"" class=""regularText"">-</a>
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<p id=""frequency_tt_178"" class=""break_values"">No frequency provided</p>
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" dupTG=0.194 SAMN07486027
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1000Genomes American Sub 694 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_175""
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data-ga-label=""frequency_tt_175"" class=""regularText"">-</a>
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<p id=""frequency_tt_175"" class=""break_values"">No frequency provided</p>
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" dupTG=0.171 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_186""
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data-ga-label=""frequency_tt_186"" class=""regularText"">-</a>
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<p id=""frequency_tt_186"" class=""break_values"">No frequency provided</p>
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" dupTG=0.0891 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_185""
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data-ga-label=""frequency_tt_185"" class=""regularText"">-</a>
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<p id=""frequency_tt_185"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1238 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_201""
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data-ga-label=""frequency_tt_201"" class=""regularText"">-</a>
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<p id=""frequency_tt_201"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1273 PRJEB7218
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Korean Genome Project KOREAN Study-wide 1832 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_196""
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data-ga-label=""frequency_tt_196"" class=""regularText"">-</a>
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<p id=""frequency_tt_196"" class=""break_values"">No frequency provided</p>
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" dupTG=0.1310 PRJNA609628
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_195""
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data-ga-label=""frequency_tt_195"" class=""regularText"">-</a>
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<p id=""frequency_tt_195"" class=""break_values"">No frequency provided</p>
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" dupTG=0.103 PRJEB5829 SAMN13000132
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Northern Sweden ACPOP Study-wide 600 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_197""
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data-ga-label=""frequency_tt_197"" class=""regularText"">-</a>
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<p id=""frequency_tt_197"" class=""break_values"">No frequency provided</p>
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" dupTG=0.083 PPRJNA503394 SAMN10359154
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A Vietnamese Genetic Variation Database Global Study-wide 214 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_202""
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data-ga-label=""frequency_tt_202"" class=""regularText"">-</a>
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<p id=""frequency_tt_202"" class=""break_values"">No frequency provided</p>
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" dupTG=0.159 PRJNA515199 SAMN10744005
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The Danish reference pan genome Danish Study-wide 40 "
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<a data-jig=""ncbipopper"" href=""#frequency_tt_187""
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data-ga-label=""frequency_tt_187"" class=""regularText"">-</a>
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<p id=""frequency_tt_187"" class=""break_values"">No frequency provided</p>
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" dupTG=0.12 PRJEB7725 SAMN13003120
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