59 lines
3.9 KiB
Text
59 lines
3.9 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs226/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs226
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#Current Build 156
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#Released October 12, 2022
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#Organism Homo sapiens
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#Position chr3:7864904 (GRCh38.p14)
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#Alleles T>C
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 T=0.968197 C=0.031803 PRJNA400167
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gnomAD - Genomes Global Study-wide 140180 T=0.963297 C=0.036703 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75944 T=0.96486 C=0.03514 SAMN10181265
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gnomAD - Genomes African Sub 42014 T=0.95097 C=0.04903 SAMN07488254
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gnomAD - Genomes American Sub 13620 T=0.97805 C=0.02195 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3324 T=0.9880 C=0.0120 SAMN07488252
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gnomAD - Genomes East Asian Sub 3124 T=0.9997 C=0.0003 SAMN07488251
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gnomAD - Genomes Other Sub 2154 T=0.9647 C=0.0353 SAMN07488248
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Allele Frequency Aggregator Total Global 21548 T=0.96176 C=0.03824 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 14286 T=0.96416 C=0.03584 SAMN10492695
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Allele Frequency Aggregator African Sub 5552 T=0.9499 C=0.0501 SAMN10492703
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Allele Frequency Aggregator Other Sub 744 T=0.978 C=0.022 SAMN11605645
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Allele Frequency Aggregator Latin American 2 Sub 610 T=0.980 C=0.020 SAMN10492700
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Allele Frequency Aggregator Latin American 1 Sub 146 T=0.979 C=0.021 SAMN10492699
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Allele Frequency Aggregator Asian Sub 112 T=1.000 C=0.000 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 98 T=0.97 C=0.03 SAMN10492702
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1000Genomes_30x Global Study-wide 6404 T=0.9697 C=0.0303 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 T=0.9502 C=0.0498 SAMN07486022
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1000Genomes_30x Europe Sub 1266 T=0.9708 C=0.0292 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 T=0.9592 C=0.0408 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 T=1.0000 C=0.0000 SAMN07486024
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1000Genomes_30x American Sub 980 T=0.981 C=0.019 SAMN07488242
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1000Genomes Global Study-wide 5008 T=0.9706 C=0.0294 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 T=0.9486 C=0.0514 SAMN07486022
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1000Genomes East Asian Sub 1008 T=1.0000 C=0.0000 SAMN07486024
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1000Genomes Europe Sub 1006 T=0.9712 C=0.0288 SAMN07488239
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1000Genomes South Asian Sub 978 T=0.964 C=0.036 SAMN07486027
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1000Genomes American Sub 694 T=0.978 C=0.022 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.9460 C=0.0540 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.9720 C=0.0280 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.9668 C=0.0332 PRJEB7218
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Genome-wide autozygosity in Daghestan Global Study-wide 1130 T=0.9628 C=0.0372 PRJNA576826 SAMN13013121
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Genome-wide autozygosity in Daghestan Daghestan Sub 622 T=0.960 C=0.040 SAMN13013126
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Genome-wide autozygosity in Daghestan Near_East Sub 144 T=0.958 C=0.042 SAMN13013123
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Genome-wide autozygosity in Daghestan Central Asia Sub 122 T=0.984 C=0.016 SAMN13013124
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Genome-wide autozygosity in Daghestan Europe Sub 108 T=0.944 C=0.056 SAMN13013127
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Genome-wide autozygosity in Daghestan South Asian Sub 98 T=0.97 C=0.03 SAMN13013122
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Genome-wide autozygosity in Daghestan Caucasus Sub 36 T=1.00 C=0.00 SAMN13013125
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.976 C=0.024 PRJEB5829 SAMN13000132
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Northern Sweden ACPOP Study-wide 600 T=0.975 C=0.025 PPRJNA503394 SAMN10359154
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Qatari Global Study-wide 216 T=0.968 C=0.032 PRJNA288297 SAMN13019808
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HapMap Global Study-wide 102 T=0.961 C=0.039 PRJNA60817 SAMN10820145
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HapMap American Sub 102 T=0.961 C=0.039 SAMN10821182
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SGDP_PRJ Global Study-wide 52 T=0.48 C=0.52 PRJNA586841
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The Danish reference pan genome Danish Study-wide 40 T=0.97 C=0.03 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 2 T=0.5 C=0.5 PRJNA267856 SAMN13113809
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