59 lines
3.8 KiB
Text
59 lines
3.8 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs200/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs200
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#Current Build 156
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#Released October 14, 2022
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#Organism Homo sapiens
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#Position chr7:27907236 (GRCh38.p14)
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#Alleles C>A / C>T
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 C=0.050334 T=0.949666 PRJNA400167
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gnomAD - Genomes Global Study-wide 140208 C=0.048328 T=0.951672 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75936 C=0.06195 T=0.93805 SAMN10181265
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gnomAD - Genomes African Sub 42012 C=0.01314 T=0.98686 SAMN07488254
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gnomAD - Genomes American Sub 13652 C=0.07611 T=0.92389 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3324 C=0.1008 T=0.8992 SAMN07488252
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gnomAD - Genomes East Asian Sub 3134 C=0.0000 T=1.0000 SAMN07488251
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gnomAD - Genomes Other Sub 2150 C=0.0679 T=0.9321 SAMN07488248
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14KJPN JAPANESE Study-wide 28258 C=0.00000 T=1.00000 PRJNA678214 SAMN16789458
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Allele Frequency Aggregator Total Global 18890 C=0.05315 T=0.94685 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 14286 C=0.06223 T=0.93777 SAMN10492695
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Allele Frequency Aggregator African Sub 2946 C=0.0112 T=0.9888 SAMN10492703
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Allele Frequency Aggregator Other Sub 692 C=0.056 T=0.944 SAMN11605645
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Allele Frequency Aggregator Latin American 2 Sub 610 C=0.049 T=0.951 SAMN10492700
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Allele Frequency Aggregator Latin American 1 Sub 146 C=0.082 T=0.918 SAMN10492699
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Allele Frequency Aggregator Asian Sub 112 C=0.000 T=1.000 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 98 C=0.01 T=0.99 SAMN10492702
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8.3KJPN JAPANESE Study-wide 16758 C=0.00000 T=1.00000 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 C=0.0275 T=0.9725 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 C=0.0050 T=0.9950 SAMN07486022
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1000Genomes_30x Europe Sub 1266 C=0.0861 T=0.9139 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 C=0.0108 T=0.9892 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 C=0.0017 T=0.9983 SAMN07486024
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1000Genomes_30x American Sub 980 C=0.044 T=0.956 SAMN07488242
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1000Genomes Global Study-wide 5008 C=0.0268 T=0.9732 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 C=0.0053 T=0.9947 SAMN07486022
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1000Genomes East Asian Sub 1008 C=0.0020 T=0.9980 SAMN07486024
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1000Genomes Europe Sub 1006 C=0.0825 T=0.9175 SAMN07488239
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1000Genomes South Asian Sub 978 C=0.011 T=0.989 SAMN07486027
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1000Genomes American Sub 694 C=0.045 T=0.955 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.0482 T=0.9518 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.0669 T=0.9331 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.0720 T=0.9280 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.0000 A=0.0000, T=1.0000 PRJNA589833
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Korean Genome Project KOREAN Study-wide 1832 C=0.0000 T=1.0000 PRJNA609628
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.060 T=0.940 PRJEB5829 SAMN13000132
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Northern Sweden ACPOP Study-wide 600 C=0.058 T=0.942 PPRJNA503394 SAMN10359154
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SGDP_PRJ Global Study-wide 552 C=0.016 T=0.984 PRJNA586841
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HapMap Global Study-wide 328 C=0.024 T=0.976 PRJNA60817 SAMN10820145
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HapMap American Sub 120 C=0.067 T=0.933 SAMN10821182
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HapMap African Sub 118 C=0.000 T=1.000 SAMN10821181
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HapMap Asian Sub 90 C=0.00 T=1.00 SAMN10821184
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Qatari Global Study-wide 216 C=0.125 T=0.875 PRJNA288297 SAMN13019808
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A Vietnamese Genetic Variation Database Global Study-wide 210 C=0.000 T=1.000 PRJNA515199 SAMN10744005
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Siberian Global Study-wide 56 C=0.07 T=0.93 PRJNA267856 SAMN13113809
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The Danish reference pan genome Danish Study-wide 40 C=0.03 T=0.97 PRJEB7725 SAMN13003120
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