251 lines
36 KiB
Text
251 lines
36 KiB
Text
<!DOCTYPE html>
|
|
<!--[if lte IE 9]> <html class="lt-ie9"> <![endif]-->
|
|
<!--[if gt IE 9]><!--> <html lang="en"> <!--<![endif]-->
|
|
<head>
|
|
<title>8BZL: Human 20S Proteasome in complex with peptide activator peptide BLM42</title>
|
|
<script type="application/ld+json">
|
|
{
|
|
"@context": "https://schema.org",
|
|
"@type": "Organization",
|
|
"name": "MMDB",
|
|
"author": {
|
|
"@type": "Organization",
|
|
"name": "NCBI Structure Group"
|
|
},
|
|
"url": "https://www.ncbi.nlm.nih.gov/Strucure/pdb/",
|
|
"description": "Macromolecule Structure Molecular Modeling Database"
|
|
}
|
|
</script>
|
|
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
|
|
<meta http-equiv="Cache-Control" content="must-revalidate">
|
|
<meta property="og:image" content="https://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbimage.fcgi?&uid=8BZL&small=t">
|
|
<meta property="og:image:width" content="100">
|
|
<meta property="og:image:height" content="100">
|
|
<meta name="viewport" content="width=device-width, initial-scale=1.0">
|
|
<meta name="description" content="ARG-SER-TYR-TYR-SERProteasome subunit alpha type-1Proteasome subunit alpha type-2Proteasome subunit alpha type-3Proteasome subunit alpha type-4Proteasome subunit alpha type-5">
|
|
<meta name="Author" content="NCBI/CBB/Structure group">
|
|
<meta name="keywords" content="ARG-SER-TYR-TYR-SER, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, Proteasome subunit alpha type-4, Proteasome subunit alpha type-5, Proteasome subunit alpha type-6, Proteasome subunit alpha type-7, Proteasome subunit beta type-1, Proteasome subunit beta type-2, Proteasome subunit beta type-3, Proteasome subunit beta type-4, Proteasome subunit beta type-5, Proteasome subunit beta type-6, Proteasome subunit beta type-7, 1-ETHYL-PYRROLIDINE-2,5-DIONE, CHLORIDE ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, POTASSIUM ION, MMDB, Protein structure, protein interaction">
|
|
<meta name="ncbi_app" content="structure">
|
|
<meta name="ncbi_uid" content="260135">
|
|
<meta name="ncbi_accn" content="8BZL">
|
|
<meta name="ncbi_pdid" content="summary">
|
|
<meta name="ncbi_phid" content="95B722657D6296610000000000000001">
|
|
<meta name="ncbi_pinger_ga_track" content="true">
|
|
<meta name="ncbi_pinger_track_stat" content="true">
|
|
<meta name="ncbi_pinger_click_ping_selector" content="button, a, input[type=search], input[type=range] li[pinger], div[pinger], label[pinger]">
|
|
<link rel="canonical" href="https://www.ncbi.nlm.nih.gov/Structure/pdb/8BZL">
|
|
<link rel="stylesheet" href="/core/jig/1.15.3/css/jig.min.css">
|
|
<link rel="stylesheet" href="/Structure/script/entrezstyle.min.css">
|
|
<link rel="stylesheet" href="/Structure/mmdb/css/mmdb.min.css?4a13">
|
|
<link rel="stylesheet" href="/Structure/icn3d/lib/jquery-ui.min.css">
|
|
<link rel="stylesheet" href="/Structure/icn3d/icn3d.css">
|
|
</head>
|
|
<body id="mmdb_summary">
|
|
<div id="centerColumn">
|
|
<div id="centerBorder">
|
|
<!-- title logo -->
|
|
<table cellspacing="0" id="mmdb_logo_links" cellpadding="0" width="100%"><tr><td><a class="ncbi_home_logo" href="/" alt="NBI HOME Logo">NCBI</a><div class="NLMLogo">National Center for<br/>Biotechnology Information</div></td><td class="titletext" align="left"><!--a href="/Structure/MMDB/mmdb.shtml"--><img border=0 src="/Structure/MMDB/strbanner.jpg" alt="8BZL - NCBI MMDB Logo"><!--/a--></td><td style="padding-bottom:1em;vertical-align:bottom"><form id="mmdbsearch" method="get" name="mmdbsearch" action="/Structure/pdb/" style="margin:0;padding:0;vertical-align: bottom;"><div class="mmdb-search-holder" style="height:100%;line-height:100%"><input accesskey="S" id="mmdb-search-box" type="search" name="uid" placeholder="Enter PDB ID or MMDB ID" value = "" aria-describedby="mmdb-search-uid" title="Enter PDB ID or MMDB ID"><button id="mmdb-search-button" class="__button mmdb-search-button" style="height:100%;line-height:100%;margin-right:-3px;" type="submit">Search</button></div></form></td></tr></table>
|
|
<!-- end title logo -->
|
|
<div style="clear:both;margin:0;padding:0;display:none" id="shutdown"></div>
|
|
<!-- insert start -->
|
|
<script>window.SARSCov2Taxid=[228407,2697049];</script>
|
|
<table id="content_table" border="0" cellspacing="0" cellpadding="0" width="968">
|
|
<tr><td align="center">
|
|
<a name="pagetop"></a>
|
|
<!-- StructureInfo start -->
|
|
<section data-section="infor" id="structure-infor-section"><h1 class="structure-title" data-mmdbid="260135" data-pdbid="8BZL" id="structure-title"><a class="link title-pdbid" href="http://www.rcsb.org/pdb/explore/explore.do?structureId=8BZL" style="font-weight:600;margin:0;">8BZL: </a><span>Human 20S Proteasome in complex with peptide activator peptide BLM42</span></h1>
|
|
<div class="floatClear" id="infor-detail"><div class="reference_section" data-pmids="39907714" id="reference-section"></div>
|
|
<div class="property_section"><form action="/Structure/mmdb/mmdbsrv.cgi" method="post" id="reloadform" name="reloadform" style="margin:0;padding:0"><input type="hidden" name="uid" value="260135"/></form><table border="0" cellpadding="4" cellspacing="4"><tr><td class="H4 pdbid-download">PDB ID: </td>
|
|
<td><a id="pdb_id_link" class="link" href="http://www.rcsb.org/pdb/explore/explore.do?structureId=8BZL" title="PDB ID">8BZL</a><a id="download-pdb-file" class="__button" tabindex="-1" href="https://files.rcsb.org/download/8BZL.pdb" title="Download PDB file" download="8BZL.pdb">Download</a><a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvStructureViewDataSetPDBdataset" title="-click to see help"></a></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">MMDB ID: </td>
|
|
<td style="font-weight:bold"><span class="info-item">260135</span> <a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvRecordIdentifiers" title="-click to see help"></a></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">PDB Deposition Date: </td>
|
|
<td><span id="depositionterm" style="padding-left: 0.2em;">2022/12/15<a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvDeposited" title="-click to see help"></a></span></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">Updated in MMDB: </td>
|
|
<td class="text" nowrap><span id="mmdb_updated" style="padding-left:0.2em">2025/03</span><a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvUpdatedInMMDB" title="-click to see help"></a></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">Experimental Method: </td>
|
|
<td class="TEXT" nowrap><div id="expmethod"><span title="x-ray diffraction" class="info-item">x-ray diffraction</span> <a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvExperimentalMethod" title="-click to see help"></a></div></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">Resolution: </td>
|
|
<td class="TEXT" id="resolution" nowrap>2.14 Å<a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#SearchFieldResolution" title="-click to see help"></a></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">Source Organism: </td>
|
|
<td class="text"><div id="taxonomy"><div id="taxonomyterm"><span id="multitaxon" style="display:inline-block"><span id="taxword" title="synthetic construct">synthetic construct</span><span arr="down" class="taxdrop_arrow">▼</span></span><a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvTaxonomy" title="-click to see help"></a></div>
|
|
<div class="menupop" id="taxonomycontent"><table cellpadding="0" cellspacing="0" width="300"><tr><th width="50%">Taxonomy</th>
|
|
<th width="50%">Molecule</th>
|
|
</tr>
|
|
<tr><td><a class="link taxcell" href="//www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?lvl=0&id=32630" style="text-decoration:underline;">synthetic construct</a></td>
|
|
<td>c, d, e, f, g, h</td>
|
|
</tr>
|
|
<tr><td><a class="link taxcell" href="//www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?lvl=0&id=9606" style="text-decoration:underline;">Homo sapiens</a></td>
|
|
<td>3, A, B, C, D, E, F, G, H, I, J, K, <br/>L, M, N, O, P, Q, R, S, T, U, V,<br/> X, Y, Z, a, b</td>
|
|
</tr>
|
|
</table></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr><td class="H4 property-name">Similar Structures: </td>
|
|
<td><div id="vast-button-holder" style="width:100%;overflow:hidden;"><button class="__button" id="vast_button" type="submit">VAST+</button>
|
|
<a class="help-img" href="/Structure/vastplus/docs/vastplus_help.html" title="-click to see help"></a></div></td>
|
|
</tr>
|
|
<tr><td colspan="2" style="text-align: center"><button class="__button" id="download_sequence" type="submit">Download sequence data</button>
|
|
<a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvDownaloadSequenceMMDB" title="-click to see help"></a></td></tr>
|
|
</table>
|
|
</div>
|
|
</div>
|
|
</section>
|
|
<!-- end of StructureInfo -->
|
|
</td></tr>
|
|
<!-- tab section -->
|
|
<tr><td><section data-section="tabs" id="display_select"></section></td></tr>
|
|
<!-- end button row -->
|
|
<tr><td align="center">
|
|
<!-- start annotations -->
|
|
<div align="center" id="annotblock" style="margin-top:0.8em;"><div class="formbox" id="authormethod"><div id="bublock0"><div class="biotext" id="bublock0_unit_name">Biological Unit for 8BZL: 34-meric; determined by author and by software (PISA)<a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvBiologicalUnit" title="-click to see help"></a></div>
|
|
<style>.unitschema-1{
|
|
background-image:url("/Structure/mmdb/mmdbimage.fcgi?uid=260135&type=2&unm=1");
|
|
}</style><section class="graph-section" data-section="graph" id="biounit-section-1"></section>
|
|
<section class="content_block" data-section="table"><table border="1" class="bucontent"><caption class="butbl_caption">Molecular Components in 8BZL<a class="help-img" href="/Structure/MMDB/docs/mmdb_help.html#MmdbsrvMolecularComponents" title="-click to see help"></a></caption>
|
|
<thead><tr><th>Label</th>
|
|
<th>Count</th>
|
|
<th>Molecule</th>
|
|
</tr></thead>
|
|
<tbody data-bun="1" data-type="protein" id="unit1_protein_annotation"><tr><td class="butbl_inner_tbl_tit" colspan="3"><div style="float:left">Proteins (34 molecules)</div></td></tr>
|
|
<tr data-row="0"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-1" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_3" id="mol-legend-1-1" class="protein-molecule-label-1" data-gi="2640589271" data-molid="1" style="color:#FFFFFF;background-color:#FF00FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">3</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_I" id="mol-legend-1-10" class="protein-molecule-label-1" data-gi="2640589280" data-molid="10" style="color:#000000;background-color:#FFFF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">I</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-3">Proteasome Subunit Beta Type-3</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="1" data-molids="1,10" id="molgraph-p-1-1"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="1"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-2" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_A" id="mol-legend-1-2" class="protein-molecule-label-1" data-gi="2640589272" data-molid="2" style="color:#FFFFFF;background-color:#0000FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">A</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_O" id="mol-legend-1-16" class="protein-molecule-label-1" data-gi="2640589286" data-molid="16" style="color:#000000;background-color:#FF9900" title="-Select icon for molecule information"><div class="protein-table-chain-label">O</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-2">Proteasome Subunit Alpha Type-2</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="2" data-molids="2,16" id="molgraph-p-1-2"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="2"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-3" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_B" id="mol-legend-1-3" class="protein-molecule-label-1" data-gi="2640589273" data-molid="3" style="color:#FFFFFF;background-color:#996633" title="-Select icon for molecule information"><div class="protein-table-chain-label">B</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_P" id="mol-legend-1-17" class="protein-molecule-label-1" data-gi="2640589287" data-molid="17" style="color:#000000;background-color:#FF6666" title="-Select icon for molecule information"><div class="protein-table-chain-label">P</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-4">Proteasome Subunit Alpha Type-4</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="3" data-molids="3,17" id="molgraph-p-1-3"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="3"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-4" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_C" id="mol-legend-1-4" class="protein-molecule-label-1" data-gi="2640589274" data-molid="4" style="color:#000000;background-color:#00FF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">C</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_Q" id="mol-legend-1-18" class="protein-molecule-label-1" data-gi="2640589288" data-molid="18" style="color:#000000;background-color:#00FF00" title="-Select icon for molecule information"><div class="protein-table-chain-label">Q</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-7">Proteasome Subunit Alpha Type-7</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="4" data-molids="4,18" id="molgraph-p-1-4"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="4"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-5" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_D" id="mol-legend-1-5" class="protein-molecule-label-1" data-gi="2640589275" data-molid="5" style="color:#000000;background-color:#CCCCCC" title="-Select icon for molecule information"><div class="protein-table-chain-label">D</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_R" id="mol-legend-1-19" class="protein-molecule-label-1" data-gi="2640589289" data-molid="19" style="color:#000000;background-color:#00FFFF" title="-Select icon for molecule information"><div class="protein-table-chain-label">R</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-5">Proteasome Subunit Alpha Type-5</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="5" data-molids="5,19" id="molgraph-p-1-5"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="5"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-6" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_E" id="mol-legend-1-6" class="protein-molecule-label-1" data-gi="2917411982" data-molid="6" style="color:#000000;background-color:#FF9900" title="-Select icon for molecule information"><div class="protein-table-chain-label">E</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_S" id="mol-legend-1-20" class="protein-molecule-label-1" data-gi="2917411984" data-molid="20" style="color:#000000;background-color:#FFFF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">S</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-1">Proteasome Subunit Alpha Type-1</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="6" data-molids="6,20" id="molgraph-p-1-6"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="6"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-7" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_F" id="mol-legend-1-7" class="protein-molecule-label-1" data-gi="2640589277" data-molid="7" style="color:#000000;background-color:#FF6666" title="-Select icon for molecule information"><div class="protein-table-chain-label">F</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_T" id="mol-legend-1-21" class="protein-molecule-label-1" data-gi="2640589291" data-molid="21" style="color:#FFFFFF;background-color:#FF00FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">T</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-3">Proteasome Subunit Alpha Type-3</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="7" data-molids="7,21" id="molgraph-p-1-7"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="7"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-8" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_G" id="mol-legend-1-8" class="protein-molecule-label-1" data-gi="2917411983" data-molid="8" style="color:#000000;background-color:#00FF00" title="-Select icon for molecule information"><div class="protein-table-chain-label">G</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_U" id="mol-legend-1-22" class="protein-molecule-label-1" data-gi="2917411985" data-molid="22" style="color:#FFFFFF;background-color:#0000FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">U</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Alpha Type-6">Proteasome Subunit Alpha Type-6</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="8" data-molids="8,22" id="molgraph-p-1-8"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="8"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-9" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_H" id="mol-legend-1-9" class="protein-molecule-label-1" data-gi="2640589279" data-molid="9" style="color:#000000;background-color:#00FFFF" title="-Select icon for molecule information"><div class="protein-table-chain-label">H</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_V" id="mol-legend-1-23" class="protein-molecule-label-1" data-gi="2640589293" data-molid="23" style="color:#FFFFFF;background-color:#996633" title="-Select icon for molecule information"><div class="protein-table-chain-label">V</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-7">Proteasome Subunit Beta Type-7</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="9" data-molids="9,23" id="molgraph-p-1-9"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="9"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-10" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_J" id="mol-legend-1-11" class="protein-molecule-label-1" data-gi="2640589281" data-molid="11" style="color:#FFFFFF;background-color:#FF00FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">J</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_X" id="mol-legend-1-24" class="protein-molecule-label-1" data-gi="2640589294" data-molid="24" style="color:#000000;background-color:#00FF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">X</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-2">Proteasome Subunit Beta Type-2</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="11" data-molids="11,24" id="molgraph-p-1-11"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="10"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-11" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_K" id="mol-legend-1-12" class="protein-molecule-label-1" data-gi="2640589282" data-molid="12" style="color:#FFFFFF;background-color:#0000FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">K</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_Y" id="mol-legend-1-25" class="protein-molecule-label-1" data-gi="2640589295" data-molid="25" style="color:#000000;background-color:#CCCCCC" title="-Select icon for molecule information"><div class="protein-table-chain-label">Y</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-5">Proteasome Subunit Beta Type-5</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="12" data-molids="12,25" id="molgraph-p-1-12"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="11"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-12" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_L" id="mol-legend-1-13" class="protein-molecule-label-1" data-gi="2640589283" data-molid="13" style="color:#FFFFFF;background-color:#996633" title="-Select icon for molecule information"><div class="protein-table-chain-label">L</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_Z" id="mol-legend-1-26" class="protein-molecule-label-1" data-gi="2640589296" data-molid="26" style="color:#000000;background-color:#FF9900" title="-Select icon for molecule information"><div class="protein-table-chain-label">Z</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-1">Proteasome Subunit Beta Type-1</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="13" data-molids="13,26" id="molgraph-p-1-13"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="12"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-13" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_M" id="mol-legend-1-14" class="protein-molecule-label-1" data-gi="2640589284" data-molid="14" style="color:#000000;background-color:#00FF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">M</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_a" id="mol-legend-1-27" class="protein-molecule-label-1" data-gi="2640589297" data-molid="27" style="color:#000000;background-color:#FF6666" title="-Select icon for molecule information"><div class="protein-table-chain-label">a</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-4">Proteasome Subunit Beta Type-4</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="14" data-molids="14,27" id="molgraph-p-1-14"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="13"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-14" style="text-align: center;"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_N" id="mol-legend-1-15" class="protein-molecule-label-1" data-gi="2640589285" data-molid="15" style="color:#000000;background-color:#CCCCCC" title="-Select icon for molecule information"><div class="protein-table-chain-label">N</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_b" id="mol-legend-1-28" class="protein-molecule-label-1" data-gi="2640589298" data-molid="28" style="color:#000000;background-color:#00FF00" title="-Select icon for molecule information"><div class="protein-table-chain-label">b</div></a></div></td>
|
|
<td>2</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Proteasome Subunit Beta Type-6">Proteasome Subunit Beta Type-6</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="15" data-molids="15,28" id="molgraph-p-1-15"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
<tr data-row="14"><td class="molecule-label-cell"><div class="identical-molecules floatClear" id="chain-list-1-15"><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_c" id="mol-legend-1-29" class="protein-molecule-label-1" data-gi="2640589299" data-molid="29" style="color:#000000;background-color:#00FFFF" title="-Select icon for molecule information"><div class="protein-table-chain-label">c</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_d" id="mol-legend-1-30" class="protein-molecule-label-1" data-gi="2640589300" data-molid="30" style="color:#000000;background-color:#FFFF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">d</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_e" id="mol-legend-1-31" class="protein-molecule-label-1" data-gi="2640589301" data-molid="31" style="color:#FFFFFF;background-color:#FF00FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">e</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_f" id="mol-legend-1-32" class="protein-molecule-label-1" data-gi="2640589302" data-molid="32" style="color:#FFFFFF;background-color:#0000FF" title="-Select icon for molecule information"><div class="protein-table-chain-label">f</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_g" id="mol-legend-1-33" class="protein-molecule-label-1" data-gi="2640589303" data-molid="33" style="color:#FFFFFF;background-color:#996633" title="-Select icon for molecule information"><div class="protein-table-chain-label">g</div></a><a href="//www.ncbi.nlm.nih.gov/protein/8BZL_h" id="mol-legend-1-34" class="protein-molecule-label-1" data-gi="2640589304" data-molid="34" style="color:#000000;background-color:#00FF99" title="-Select icon for molecule information"><div class="protein-table-chain-label">h</div></a></div></td>
|
|
<td>6</td>
|
|
<td class="annotation-cell"><div class="graph-annot"><div class="molecule-name" title="Arg-ser-tyr-tyr-ser">Arg-ser-tyr-tyr-ser</div>
|
|
<div class="annot-img-block" data-bun="1" data-gmolid="29" data-molids="29,30,31,32,33,34" id="molgraph-p-1-29"><img alt="Molecule annotation" src="/Structure/mmdb/images/bigLoader.gif"></div>
|
|
</div></td>
|
|
</tr>
|
|
</tbody>
|
|
<tbody data-bun="1" data-type="chemical" id="unit1_chemical_annotation"><tr><td class="butbl_inner_tbl_tit" colspan="3"><div style="float:left">Chemicals and Non-standard biopolymers (83 molecules)</div></td></tr>
|
|
<tr><td data-row="0"><div class="chem-label-box"><span class="chemical-molecule-label" id="mol-chem-legend-1-1" title="-Select icon for PubChem compound information"><a class="link chem_label" data-molids="35,38,39,40,41,42,43,44,45,46,47,48,49,51,52,53,57,58,61,66,67,68,69,73,74,75,76,78,79,80,82,83,84,85,86,87,88,89,90,91,93,97,98,102,103,104,105,106,110,111,112,113,115,116" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945322">1</a></span></div></td>
|
|
<td><div class="chem-label">54</div></td>
|
|
<td><div class="chem-name-thumb floatClear"><span class="chem-name" data-sid="505945322"><a class="link mmdb-chem-name" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945322" title="CHLORIDE ION">CHLORIDE ION</a></span><span class="chem-image-holder" title="CHLORIDE ION"><a href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945322"><img type="thumb" class="chemthumb" align="absmiddle" src="//pubchem.ncbi.nlm.nih.gov/image/imgsrv.fcgi?sid=505945322" alt="CHLORIDE ION"></a></span></div></td>
|
|
</tr>
|
|
<tr><td data-row="1"><div class="chem-label-box"><span class="chemical-molecule-label" id="mol-chem-legend-1-2" title="-Select icon for PubChem compound information"><a class="link chem_label" data-molids="36,59,60,62,65,70,99,100,101,107" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945323">2</a></span></div></td>
|
|
<td><div class="chem-label">10</div></td>
|
|
<td><div class="chem-name-thumb floatClear"><span class="chem-name" data-sid="505945323"><a class="link mmdb-chem-name" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945323" title="MAGNESIUM ION">MAGNESIUM ION</a></span><span class="chem-image-holder" title="MAGNESIUM ION"><a href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945323"><img type="thumb" class="chemthumb" align="absmiddle" src="//pubchem.ncbi.nlm.nih.gov/image/imgsrv.fcgi?sid=505945323" alt="MAGNESIUM ION"></a></span></div></td>
|
|
</tr>
|
|
<tr><td data-row="2"><div class="chem-label-box"><span class="chemical-molecule-label" id="mol-chem-legend-1-3" title="-Select icon for PubChem compound information"><a class="link chem_label" data-molids="37,55,63,64,71,77,95,108,114" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945324">3</a></span></div></td>
|
|
<td><div class="chem-label">9</div></td>
|
|
<td><div class="chem-name-thumb floatClear"><span class="chem-name" data-sid="505945324"><a class="link mmdb-chem-name" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945324" title="PENTAETHYLENE GLYCOL">PENTAETHYLENE GLYCOL</a></span><span class="chem-image-holder" title="PENTAETHYLENE GLYCOL"><a href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945324"><img type="thumb" class="chemthumb" align="absmiddle" src="//pubchem.ncbi.nlm.nih.gov/image/imgsrv.fcgi?sid=505945324" alt="PENTAETHYLENE GLYCOL"></a></span></div></td>
|
|
</tr>
|
|
<tr><td data-row="3"><div class="chem-label-box"><span class="chemical-molecule-label" id="mol-chem-legend-1-4" title="-Select icon for PubChem compound information"><a class="link chem_label" data-molids="50,56,92,96" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945325">4</a></span></div></td>
|
|
<td><div class="chem-label">4</div></td>
|
|
<td><div class="chem-name-thumb floatClear"><span class="chem-name" data-sid="505945325"><a class="link mmdb-chem-name" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945325" title="1-ETHYL-PYRROLIDINE-2,5-DIONE">1-ETHYL-PYRROLIDINE-2,5-DIONE</a></span><span class="chem-image-holder" title="1-ETHYL-PYRROLIDINE-2,5-DIONE"><a href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945325"><img type="thumb" class="chemthumb" align="absmiddle" src="//pubchem.ncbi.nlm.nih.gov/image/imgsrv.fcgi?sid=505945325" alt="1-ETHYL-PYRROLIDINE-2,5-DIONE"></a></span></div></td>
|
|
</tr>
|
|
<tr><td data-row="4"><div class="chem-label-box"><span class="chemical-molecule-label" id="mol-chem-legend-1-5" title="-Select icon for PubChem compound information"><a class="link chem_label" data-molids="54,72,81,94,109,117" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945326">5</a></span></div></td>
|
|
<td><div class="chem-label">6</div></td>
|
|
<td><div class="chem-name-thumb floatClear"><span class="chem-name" data-sid="505945326"><a class="link mmdb-chem-name" href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945326" title="POTASSIUM ION">POTASSIUM ION</a></span><span class="chem-image-holder" title="POTASSIUM ION"><a href="//pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?sid=505945326"><img type="thumb" class="chemthumb" align="absmiddle" src="//pubchem.ncbi.nlm.nih.gov/image/imgsrv.fcgi?sid=505945326" alt="POTASSIUM ION"></a></span></div></td>
|
|
</tr>
|
|
</tbody>
|
|
</table>
|
|
<div style="margin:0.5em 1em;text-align:left; font-size:85%;">* Click molecule labels to explore molecular sequence information.<br/></div>
|
|
</section>
|
|
</div></div></div>
|
|
<!-- end annotations -->
|
|
</td></tr>
|
|
</table>
|
|
<!-- Start of citation -->
|
|
<div align="left" class="citing"><hr width="85%"/><div style="font-weight:bold">Citing MMDB</div><div class="citref" style="padding:0.2em;"><img style="border:0;text-align:left;height:15px;width:15px;margin-right:0.2em" src="//pubchem.ncbi.nlm.nih.gov/images/PubMed.gif"> <span style="color:#444"> Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. </span> <cite><a class="link" href="//www.ncbi.nlm.nih.gov/pubmed/24319143">"<span style="font-style:italic;"> MMDB and VAST+: tracking structural similarities between macromolecular complexes. <b style="font-size:90%">Nucleic Acids Res. 2014 Jan; 42(Database issue)</b>:D297-303</span></a></cite></div></div>
|
|
<!-- end citation -->
|
|
<!-- insert end -->
|
|
</div> <!-- end of centerBorder -->
|
|
</div> <!-- end of centerColumn -->
|
|
<script src="/Structure/icn3d/lib/jquery.min.js"></script>
|
|
<script src="/Structure/icn3d/lib/jquery-ui.min.js"></script>
|
|
<script src="/Structure/icn3d/lib/threeClass.min.js"></script>
|
|
<script src="/Structure/icn3d/icn3d.min.js"></script>
|
|
<script src="/Structure/mmdb/js/mmdb.min.js?65fe"></script>
|
|
<script>window.MMDB={"BuJSon":{"pdbId": "8BZL","mmdbId": 260135,"qgis": [2640589271,2640589272,2640589273,2640589274,2640589275,2640589277,2640589279,2640589281,2640589282,2640589283,2640589284,2640589285,2640589299,2917411982,2917411983],"1": {"protein": [{"repMolId": 1,"chain": "3","gi": 2640589271,"length": 205,"identicalMolids": [1,10],"fullChainSdid": 2499444,"fullChainStart": 1,"fullChainTu": 205,"secStr": {},"domains": []},{"repMolId": 2,"chain": "A","gi": 2640589272,"length": 234,"identicalMolids": [2,16],"fullChainSdid": 2499445,"fullChainStart": 1,"fullChainTu": 234,"secStr": {},"domains": []},{"repMolId": 3,"chain": "B","gi": 2640589273,"length": 261,"identicalMolids": [3,17],"fullChainSdid": 2499446,"fullChainStart": 1,"fullChainTu": 261,"secStr": {},"domains": []},{"repMolId": 4,"chain": "C","gi": 2640589274,"length": 248,"identicalMolids": [4,18],"fullChainSdid": 2499447,"fullChainStart": 1,"fullChainTu": 248,"secStr": {},"domains": []},{"repMolId": 5,"chain": "D","gi": 2640589275,"length": 241,"identicalMolids": [5,19],"fullChainSdid": 2499448,"fullChainStart": 1,"fullChainTu": 241,"secStr": {},"domains": []},{"repMolId": 6,"chain": "E","gi": 2917411982,"length": 263,"identicalMolids": [6,20],"fullChainSdid": 2499449,"fullChainStart": 1,"fullChainTu": 263,"secStr": {},"domains": []},{"repMolId": 7,"chain": "F","gi": 2640589277,"length": 255,"identicalMolids": [7,21],"fullChainSdid": 2499450,"fullChainStart": 1,"fullChainTu": 255,"secStr": {},"domains": []},{"repMolId": 8,"chain": "G","gi": 2917411983,"length": 246,"identicalMolids": [8,22],"fullChainSdid": 2499451,"fullChainStart": 1,"fullChainTu": 246,"secStr": {},"domains": []},{"repMolId": 9,"chain": "H","gi": 2640589279,"length": 277,"identicalMolids": [9,23],"fullChainSdid": 2499452,"fullChainStart": 1,"fullChainTu": 277,"secStr": {},"domains": []},{"repMolId": 11,"chain": "J","gi": 2640589281,"length": 201,"identicalMolids": [11,24],"fullChainSdid": 2499454,"fullChainStart": 1,"fullChainTu": 201,"secStr": {},"domains": []},{"repMolId": 12,"chain": "K","gi": 2640589282,"length": 263,"identicalMolids": [12,25],"fullChainSdid": 2499455,"fullChainStart": 1,"fullChainTu": 263,"secStr": {},"domains": []},{"repMolId": 13,"chain": "L","gi": 2640589283,"length": 241,"identicalMolids": [13,26],"fullChainSdid": 2499456,"fullChainStart": 1,"fullChainTu": 241,"secStr": {},"domains": []},{"repMolId": 14,"chain": "M","gi": 2640589284,"length": 264,"identicalMolids": [14,27],"fullChainSdid": 2499457,"fullChainStart": 1,"fullChainTu": 264,"secStr": {},"domains": []},{"repMolId": 15,"chain": "N","gi": 2640589285,"length": 239,"identicalMolids": [15,28],"fullChainSdid": 2499458,"fullChainStart": 1,"fullChainTu": 239,"secStr": {},"domains": []},{"repMolId": 29,"chain": "c","gi": 2640589299,"length": 14,"identicalMolids": [29,30,31,32,33,34],"fullChainSdid": 2499472,"fullChainStart": 1,"fullChainTu": 14,"secStr": {},"domains": []}]}},"QmanLabel":"mmdb-260135","TabLabels":{"0":{"name":"Biological Unit","value":0,"isactive":true},"2":{"name":"Asymmetric Unit","value":2,"isactive":false}},"UnitInfo":{"1": {"cmplx": {"3": {"name": "Single 3D structure","selected": false},"2": {"name": "alpha-Carbons","selected": false}},"schleg": [true,false,true],"islarge": false}},"VastCnt":0,"hasValidImages":{"1":1},"hasValidIntrImg":{"1":1},"hasVastP":1,"isCOVID19":0,"isLargeBiounit":{"1":1},"sidStr":[505945322,505945323,505945324,505945325,505945326],"sourceOrganism":[9606,32630]};
|
|
</script>
|
|
<script defer type="text/javascript" src="https://www.ncbi.nlm.nih.gov/core/pinger/pinger.js"></script>
|
|
</body></html>
|