897 lines
158 KiB
HTML
897 lines
158 KiB
HTML
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head>
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<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
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<meta http-equiv="X-UA-Compatible" content="IE=9"/>
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<meta name="generator" content="Doxygen 1.9.0"/>
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<meta name="viewport" content="width=device-width, initial-scale=1"/>
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<title>NCBI C++ ToolKit: CSpliced_seg Class Reference</title>
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<link href="tabs.css" rel="stylesheet" type="text/css"/>
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galert(['div.nav_and_browser', 'div.header', '#universal_header',
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</head>
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<body>
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<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
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<div id="titlearea">
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<table cellspacing="0" cellpadding="0">
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<tbody>
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<tr style="height: 56px;">
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<td id="projectalign" style="padding-left: 0.5em;">
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<div id="projectname">NCBI C++ ToolKit
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</div>
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</td>
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</tr>
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</tbody>
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</table>
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</div>
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<!-- end header part -->
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<!-- Generated by Doxygen 1.9.0 -->
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<script type="text/javascript" src="menudata.js"></script>
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<script type="text/javascript" src="menu.js"></script>
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<script type="text/javascript">
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/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&dn=gpl-2.0.txt GPL-v2 */
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$(function() {
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initMenu('',true,true,'/toolkit/','Search');
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});
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/* @license-end */</script>
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<div id="main-nav"></div>
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</div><!-- top -->
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<div class="header">
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<div class="summary">
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<a href="#pub-types">Public Types</a> |
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<a href="#pub-methods">Public Member Functions</a> |
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<a href="#pri-types">Private Types</a> |
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<a href="#pri-methods">Private Member Functions</a> |
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<a href="classCSpliced__seg-members.html">List of all members</a> </div>
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<div class="headertitle">
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<div class="title">CSpliced_seg Class Reference</div> </div>
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</div><!--header-->
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<div class="contents">
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<p>
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<a class="el" href = "https://www.ncbi.nlm.nih.gov/toolkitbookgh/?term=CSpliced_seg">Search Toolkit Book for <i>CSpliced_seg</i></a>
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</p>
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<p><code>#include <<a class="el" href="Spliced__seg_8hpp_source.html">objects/seqalign/Spliced_seg.hpp</a>></code></p>
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<div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
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<img id="dynsection-0-trigger" src="closed.png" alt="+"/> Inheritance diagram for CSpliced_seg:</div>
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<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
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</div>
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<div id="dynsection-0-content" class="dyncontent" style="display:none;">
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<div class="center"><img src="img__inherit__graph/classCSpliced__seg__inherit__graph.png" border="0" usemap="#aCSpliced__seg_inherit__map" alt="Inheritance graph"/></div>
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<map name="aCSpliced__seg_inherit__map" id="aCSpliced__seg_inherit__map">
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<area shape="rect" title=" " alt="" coords="24,304,127,331"/>
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<area shape="rect" href="classCSpliced__seg__Base.html" title="CSpliced_seg_Base –." alt="" coords="5,229,145,256"/>
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<area shape="rect" href="classCSerialObject.html" title="Base class for all serializable objects." alt="" coords="24,155,127,181"/>
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<area shape="rect" href="classCObject.html" title="CObject –." alt="" coords="40,80,111,107"/>
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</map>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
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<div id="dynsection-1" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
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<img id="dynsection-1-trigger" src="closed.png" alt="+"/> Collaboration diagram for CSpliced_seg:</div>
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<div id="dynsection-1-summary" class="dynsummary" style="display:block;">
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</div>
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<div id="dynsection-1-content" class="dyncontent" style="display:none;">
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<div class="center"><img src="img__coll__graph/classCSpliced__seg__coll__graph.png" border="0" usemap="#aCSpliced__seg_coll__map" alt="Collaboration graph"/></div>
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<map name="aCSpliced__seg_coll__map" id="aCSpliced__seg_coll__map">
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<area shape="rect" title=" " alt="" coords="87,559,189,585"/>
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<area shape="rect" href="classCSpliced__seg__Base.html" title="CSpliced_seg_Base –." alt="" coords="68,483,208,509"/>
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<area shape="rect" href="classCSerialObject.html" title="Base class for all serializable objects." alt="" coords="19,379,121,405"/>
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<area shape="rect" href="classCRef.html" title=" " alt="" coords="145,379,272,405"/>
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<area shape="rect" href="classpair__base__member.html" title=" " alt="" coords="189,185,367,227"/>
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<area shape="rect" href="classCRef.html" title="CRef –." alt="" coords="259,289,393,316"/>
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<area shape="rect" title=" " alt="" coords="183,89,272,115"/>
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<area shape="rect" title=" " alt="" coords="360,5,412,32"/>
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</map>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-types"></a>
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Public Types</h2></td></tr>
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<tr class="memitem:a29d414646ccc2efd7c6e077d011d9c4a"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a></td></tr>
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<tr class="memdesc:a29d414646ccc2efd7c6e077d011d9c4a"><td class="mdescLeft"> </td><td class="mdescRight">types <a href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">More...</a><br /></td></tr>
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<tr class="separator:a29d414646ccc2efd7c6e077d011d9c4a"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_types_classCSpliced__seg__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCSpliced__seg__Base')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCSpliced__seg__Base.html">CSpliced_seg_Base</a></td></tr>
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<tr class="memitem:gae951329dd75dc287fc1fa171e9d0977d inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae951329dd75dc287fc1fa171e9d0977d">EProduct_type</a> { <a class="el" href="group__dataspec__NCBI__Seqalign.html#ggae951329dd75dc287fc1fa171e9d0977da4738594d1ac9436ed0ba52252fefad39">eProduct_type_transcript</a> = 0
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#ggae951329dd75dc287fc1fa171e9d0977dacbd13151187e753eb453c6679b09ac9a">eProduct_type_protein</a> = 1
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}</td></tr>
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<tr class="separator:gae951329dd75dc287fc1fa171e9d0977d inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga99c4a6141e827fe9bc4fa5bff840b203 inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">enum class  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga99c4a6141e827fe9bc4fa5bff840b203">E_memberIndex</a> { <br />
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  <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203ad2c4d82f7037e318e1aa6f58d06bd153">e__allMandatory</a> = 0
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203a6e3a5ec9492483c63d245f719f02070f">e_product_id</a>
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203ab3d9c02e9450abb0d82050f08340eed9">e_genomic_id</a>
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203a92aceba32f129d75ebbe16f7058716e2">e_product_strand</a>
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, <br />
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  <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203a448599c294861aa46b1067d1a083d91f">e_genomic_strand</a>
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203a9e39301094f6a85e34b816f58afa70e2">e_product_type</a>
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203a0d9c346ad899a625ce405277f6aaa6c7">e_exons</a>
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203aede12852dd7d50cd98e7bcd0232c7ce4">e_poly_a</a>
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, <br />
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  <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203aa652fd4aca7c51b9b10dc41921a35b87">e_product_length</a>
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, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga99c4a6141e827fe9bc4fa5bff840b203ad998ea65b9b7c76e76f22842ff5fdff6">e_modifiers</a>
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<br />
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}</td></tr>
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<tr class="separator:ga99c4a6141e827fe9bc4fa5bff840b203 inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab2c0ef9fe8fd7b636c0063d28716b89d inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSeq__id.html">CSeq_id</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab2c0ef9fe8fd7b636c0063d28716b89d">TProduct_id</a></td></tr>
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<tr class="separator:gab2c0ef9fe8fd7b636c0063d28716b89d inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae3afae7abba708584a731d6665bf0fda inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSeq__id.html">CSeq_id</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae3afae7abba708584a731d6665bf0fda">TGenomic_id</a></td></tr>
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||
<tr class="separator:gae3afae7abba708584a731d6665bf0fda inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga82186683c629181c1b766dc780c6c90f inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga82186683c629181c1b766dc780c6c90f">TProduct_strand</a></td></tr>
|
||
<tr class="separator:ga82186683c629181c1b766dc780c6c90f inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga92eba5f7add35628a245494ccab89a2c inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga92eba5f7add35628a245494ccab89a2c">TGenomic_strand</a></td></tr>
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<tr class="separator:ga92eba5f7add35628a245494ccab89a2c inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaddca687e512d9556665df0f0dbca544d inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__dataspec__NCBI__Seqalign.html#gae951329dd75dc287fc1fa171e9d0977d">EProduct_type</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaddca687e512d9556665df0f0dbca544d">TProduct_type</a></td></tr>
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<tr class="separator:gaddca687e512d9556665df0f0dbca544d inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
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<tr class="memitem:ga9d6d9401d5a30ab77653fdc4f1747b80 inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef list< <a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSpliced__exon.html">CSpliced_exon</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9d6d9401d5a30ab77653fdc4f1747b80">TExons</a></td></tr>
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<tr class="separator:ga9d6d9401d5a30ab77653fdc4f1747b80 inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga289b14577fe726ae038e3fad21bebb0f inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga289b14577fe726ae038e3fad21bebb0f">TPoly_a</a></td></tr>
|
||
<tr class="separator:ga289b14577fe726ae038e3fad21bebb0f inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga049a519cc6a6ac660a9bb228852c6b16 inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga049a519cc6a6ac660a9bb228852c6b16">TProduct_length</a></td></tr>
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||
<tr class="separator:ga049a519cc6a6ac660a9bb228852c6b16 inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
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<tr class="memitem:ga889e52b059e6d820c682a1275a3f9469 inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef list< <a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSpliced__seg__modifier.html">CSpliced_seg_modifier</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga889e52b059e6d820c682a1275a3f9469">TModifiers</a></td></tr>
|
||
<tr class="separator:ga889e52b059e6d820c682a1275a3f9469 inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga8d4dccb9ce3f73431e59ea59219d4a4c inherit pub_types_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSerialObject_1_1CMemberIndex.html">Tparent::CMemberIndex</a>< <a class="el" href="group__dataspec__NCBI__Seqalign.html#ga99c4a6141e827fe9bc4fa5bff840b203">E_memberIndex</a>, 10 > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga8d4dccb9ce3f73431e59ea59219d4a4c">TmemberIndex</a></td></tr>
|
||
<tr class="separator:ga8d4dccb9ce3f73431e59ea59219d4a4c inherit pub_types_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_types_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCObject')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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<tr class="memitem:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> { <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca2b8c59f649cc88eeb7eaeba939e2838d">eAllocFillNone</a> = 1
|
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, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca336d7ff658b673c2e8fe3aed9b155f04">eAllocFillZero</a>
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, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588ccab3631bf1c36b77f950d94372290deb76">eAllocFillPattern</a>
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}</td></tr>
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<tr class="memdesc:ga3cf5f3ac0aef32c4aab1fa66513588cc"><td class="mdescLeft"> </td><td class="mdescRight">Control filling of newly allocated memory. <a href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">More...</a><br /></td></tr>
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<tr class="separator:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCObjectCounterLocker.html">CObjectCounterLocker</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">TLockerType</a></td></tr>
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||
<tr class="memdesc:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Default locker type for <a class="el" href="classCRef.html" title="CRef –.">CRef</a>. <a href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">More...</a><br /></td></tr>
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||
<tr class="separator:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef atomic< <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">TCounter</a></td></tr>
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<tr class="memdesc:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Counter type is CAtomiCounter. <a href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">More...</a><br /></td></tr>
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<tr class="separator:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a></td></tr>
|
||
<tr class="memdesc:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Alias for value type of counter. <a href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">More...</a><br /></td></tr>
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<tr class="separator:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr class="memitem:a0483d0b8a3446d0f53222b11ede94838"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a0483d0b8a3446d0f53222b11ede94838">CSpliced_seg</a> (void)</td></tr>
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<tr class="separator:a0483d0b8a3446d0f53222b11ede94838"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a477d0787500ad1663b2b2a612dd32847"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a477d0787500ad1663b2b2a612dd32847">~CSpliced_seg</a> (void)</td></tr>
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<tr class="separator:a477d0787500ad1663b2b2a612dd32847"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a9beac393f048eaae409622c0ee5eea99"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a9beac393f048eaae409622c0ee5eea99">Validate</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> full_test=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:a9beac393f048eaae409622c0ee5eea99"><td class="mdescLeft"> </td><td class="mdescRight">Validators. <a href="classCSpliced__seg.html#a9beac393f048eaae409622c0ee5eea99">More...</a><br /></td></tr>
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<tr class="separator:a9beac393f048eaae409622c0ee5eea99"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a7b607dd5d7993dbee5f93f1d39b68d38"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a7b607dd5d7993dbee5f93f1d39b68d38">CheckNumRows</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="separator:a7b607dd5d7993dbee5f93f1d39b68d38"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a701e3fb09e7b03cdd4cbaf81acb15aa0"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a701e3fb09e7b03cdd4cbaf81acb15aa0">IsConsistentBiologicalOrder</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a701e3fb09e7b03cdd4cbaf81acb15aa0"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a54782b8616beac708870b7f7f75c4b8f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCRange.html">CRange</a>< <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a54782b8616beac708870b7f7f75c4b8f">GetSeqRange</a> (<a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:a54782b8616beac708870b7f7f75c4b8f"><td class="mdescLeft"> </td><td class="mdescRight">GetSeqRange <a class="el" href="classNB.html">NB</a>: In case the product-type is protein, these only return the amin part of Prot-pos. <a href="classCSpliced__seg.html#a54782b8616beac708870b7f7f75c4b8f">More...</a><br /></td></tr>
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<tr class="separator:a54782b8616beac708870b7f7f75c4b8f"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a800668c69939a8f960bd23ea44e995dc"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a800668c69939a8f960bd23ea44e995dc">GetSeqStart</a> (<a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a800668c69939a8f960bd23ea44e995dc"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a088eb9f6bb7a69601d4b304ce21046dd"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a088eb9f6bb7a69601d4b304ce21046dd">GetSeqStop</a> (<a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a088eb9f6bb7a69601d4b304ce21046dd"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aa0ce331eb5fd5ac0282fafb87ee54297"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#aa0ce331eb5fd5ac0282fafb87ee54297">GetSeqStrand</a> (<a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:aa0ce331eb5fd5ac0282fafb87ee54297"><td class="mdescLeft"> </td><td class="mdescRight">Get strand (the first one if segments have different strands). <a href="classCSpliced__seg.html#aa0ce331eb5fd5ac0282fafb87ee54297">More...</a><br /></td></tr>
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||
<tr class="separator:aa0ce331eb5fd5ac0282fafb87ee54297"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ab1bf12cd69faa35e3c1016344f426565"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSeq__align.html">CSeq_align</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#ab1bf12cd69faa35e3c1016344f426565">AsDiscSeg</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ab1bf12cd69faa35e3c1016344f426565"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="namespaceConvert.html">Convert</a> this alignment to a discontinuous segment. <a href="classCSpliced__seg.html#ab1bf12cd69faa35e3c1016344f426565">More...</a><br /></td></tr>
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<tr class="separator:ab1bf12cd69faa35e3c1016344f426565"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCSpliced__seg__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCSpliced__seg__Base')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCSpliced__seg__Base.html">CSpliced_seg_Base</a></td></tr>
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<tr class="memitem:ga92ec7b1227e3133eb2bbed4b68288cac inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga92ec7b1227e3133eb2bbed4b68288cac">CSpliced_seg_Base</a> (void)</td></tr>
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<tr class="separator:ga92ec7b1227e3133eb2bbed4b68288cac inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gabdd304c8b2823dd04936f7c0222290b2 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gabdd304c8b2823dd04936f7c0222290b2">~CSpliced_seg_Base</a> (void)</td></tr>
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<tr class="separator:gabdd304c8b2823dd04936f7c0222290b2 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5a731ab458b1a14f83d4c6577ef4eeac inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5a731ab458b1a14f83d4c6577ef4eeac">DECLARE_INTERNAL_TYPE_INFO</a> ()</td></tr>
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<tr class="separator:ga5a731ab458b1a14f83d4c6577ef4eeac inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga82aaa30095cfb6aa6bc9bcf43f7b29e3 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga82aaa30095cfb6aa6bc9bcf43f7b29e3">IsSetProduct_id</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga82aaa30095cfb6aa6bc9bcf43f7b29e3 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">product is either protein or transcript (cDNA) <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Product_id data member. <a href="group__dataspec__NCBI__Seqalign.html#ga82aaa30095cfb6aa6bc9bcf43f7b29e3">More...</a><br /></td></tr>
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<tr class="separator:ga82aaa30095cfb6aa6bc9bcf43f7b29e3 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaae5296a2ec5016bd16790c38863d1bfd inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaae5296a2ec5016bd16790c38863d1bfd">CanGetProduct_id</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gaae5296a2ec5016bd16790c38863d1bfd inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetProduct_id method. <a href="group__dataspec__NCBI__Seqalign.html#gaae5296a2ec5016bd16790c38863d1bfd">More...</a><br /></td></tr>
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<tr class="separator:gaae5296a2ec5016bd16790c38863d1bfd inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gac096c1e09acb2a616e13f1a14abb9a59 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gac096c1e09acb2a616e13f1a14abb9a59">ResetProduct_id</a> (void)</td></tr>
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<tr class="memdesc:gac096c1e09acb2a616e13f1a14abb9a59 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Product_id data member. <a href="group__dataspec__NCBI__Seqalign.html#gac096c1e09acb2a616e13f1a14abb9a59">More...</a><br /></td></tr>
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<tr class="separator:gac096c1e09acb2a616e13f1a14abb9a59 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4633993d7271018636918d9a9336d9f2 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#gab2c0ef9fe8fd7b636c0063d28716b89d">TProduct_id</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga4633993d7271018636918d9a9336d9f2">GetProduct_id</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga4633993d7271018636918d9a9336d9f2 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Product_id member data. <a href="group__dataspec__NCBI__Seqalign.html#ga4633993d7271018636918d9a9336d9f2">More...</a><br /></td></tr>
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<tr class="separator:ga4633993d7271018636918d9a9336d9f2 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga3f7960421548ed136787093f62b3a6e0 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga3f7960421548ed136787093f62b3a6e0">SetProduct_id</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gab2c0ef9fe8fd7b636c0063d28716b89d">TProduct_id</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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<tr class="memdesc:ga3f7960421548ed136787093f62b3a6e0 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_id data member. <a href="group__dataspec__NCBI__Seqalign.html#ga3f7960421548ed136787093f62b3a6e0">More...</a><br /></td></tr>
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<tr class="separator:ga3f7960421548ed136787093f62b3a6e0 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga64169866d59088187be67f1dd71dfb0c inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab2c0ef9fe8fd7b636c0063d28716b89d">TProduct_id</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga64169866d59088187be67f1dd71dfb0c">SetProduct_id</a> (void)</td></tr>
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<tr class="memdesc:ga64169866d59088187be67f1dd71dfb0c inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_id data member. <a href="group__dataspec__NCBI__Seqalign.html#ga64169866d59088187be67f1dd71dfb0c">More...</a><br /></td></tr>
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<tr class="separator:ga64169866d59088187be67f1dd71dfb0c inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaff0c0a1b521b11c463cdc3d8c507c128 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaff0c0a1b521b11c463cdc3d8c507c128">IsSetGenomic_id</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gaff0c0a1b521b11c463cdc3d8c507c128 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Genomic_id data member. <a href="group__dataspec__NCBI__Seqalign.html#gaff0c0a1b521b11c463cdc3d8c507c128">More...</a><br /></td></tr>
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<tr class="separator:gaff0c0a1b521b11c463cdc3d8c507c128 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga30f393db3ec304bed8fc2ca3ec326fac inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga30f393db3ec304bed8fc2ca3ec326fac">CanGetGenomic_id</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga30f393db3ec304bed8fc2ca3ec326fac inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetGenomic_id method. <a href="group__dataspec__NCBI__Seqalign.html#ga30f393db3ec304bed8fc2ca3ec326fac">More...</a><br /></td></tr>
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<tr class="separator:ga30f393db3ec304bed8fc2ca3ec326fac inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0bbc7d57cc3e7ec941b25a675c2ba913 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga0bbc7d57cc3e7ec941b25a675c2ba913">ResetGenomic_id</a> (void)</td></tr>
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<tr class="memdesc:ga0bbc7d57cc3e7ec941b25a675c2ba913 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Genomic_id data member. <a href="group__dataspec__NCBI__Seqalign.html#ga0bbc7d57cc3e7ec941b25a675c2ba913">More...</a><br /></td></tr>
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<tr class="separator:ga0bbc7d57cc3e7ec941b25a675c2ba913 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga257f9edb8569507f74172af5bcade6ab inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#gae3afae7abba708584a731d6665bf0fda">TGenomic_id</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga257f9edb8569507f74172af5bcade6ab">GetGenomic_id</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga257f9edb8569507f74172af5bcade6ab inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Genomic_id member data. <a href="group__dataspec__NCBI__Seqalign.html#ga257f9edb8569507f74172af5bcade6ab">More...</a><br /></td></tr>
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||
<tr class="separator:ga257f9edb8569507f74172af5bcade6ab inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab943741aca80269c8ece184f3d741189 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab943741aca80269c8ece184f3d741189">SetGenomic_id</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gae3afae7abba708584a731d6665bf0fda">TGenomic_id</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:gab943741aca80269c8ece184f3d741189 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Genomic_id data member. <a href="group__dataspec__NCBI__Seqalign.html#gab943741aca80269c8ece184f3d741189">More...</a><br /></td></tr>
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<tr class="separator:gab943741aca80269c8ece184f3d741189 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga8f23c72602dde8e501517e321817f047 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae3afae7abba708584a731d6665bf0fda">TGenomic_id</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga8f23c72602dde8e501517e321817f047">SetGenomic_id</a> (void)</td></tr>
|
||
<tr class="memdesc:ga8f23c72602dde8e501517e321817f047 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Genomic_id data member. <a href="group__dataspec__NCBI__Seqalign.html#ga8f23c72602dde8e501517e321817f047">More...</a><br /></td></tr>
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<tr class="separator:ga8f23c72602dde8e501517e321817f047 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga42c2fb012ee744d48bce7e25cfbf52be inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga42c2fb012ee744d48bce7e25cfbf52be">IsSetProduct_strand</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga42c2fb012ee744d48bce7e25cfbf52be inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">should be 'plus' or 'minus' <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Product_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#ga42c2fb012ee744d48bce7e25cfbf52be">More...</a><br /></td></tr>
|
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<tr class="separator:ga42c2fb012ee744d48bce7e25cfbf52be inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga779421b650b6430d211aa38ddf9ac13d inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga779421b650b6430d211aa38ddf9ac13d">CanGetProduct_strand</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga779421b650b6430d211aa38ddf9ac13d inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetProduct_strand method. <a href="group__dataspec__NCBI__Seqalign.html#ga779421b650b6430d211aa38ddf9ac13d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga779421b650b6430d211aa38ddf9ac13d inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga997a3af2369d8935782d62294b860b8d inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga997a3af2369d8935782d62294b860b8d">ResetProduct_strand</a> (void)</td></tr>
|
||
<tr class="memdesc:ga997a3af2369d8935782d62294b860b8d inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Product_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#ga997a3af2369d8935782d62294b860b8d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga997a3af2369d8935782d62294b860b8d inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gadc2485dc229e19b45ea8637b4e7432b5 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">TProduct_strand</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gadc2485dc229e19b45ea8637b4e7432b5">GetProduct_strand</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gadc2485dc229e19b45ea8637b4e7432b5 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Product_strand member data. <a href="group__dataspec__NCBI__Seqalign.html#gadc2485dc229e19b45ea8637b4e7432b5">More...</a><br /></td></tr>
|
||
<tr class="separator:gadc2485dc229e19b45ea8637b4e7432b5 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga59131dc4ca2484d1b29b5c962417bf73 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga59131dc4ca2484d1b29b5c962417bf73">SetProduct_strand</a> (<a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">TProduct_strand</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="memdesc:ga59131dc4ca2484d1b29b5c962417bf73 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#ga59131dc4ca2484d1b29b5c962417bf73">More...</a><br /></td></tr>
|
||
<tr class="separator:ga59131dc4ca2484d1b29b5c962417bf73 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga78c834ecf9b7616dff9e9903c5ac64a5 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">TProduct_strand</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga78c834ecf9b7616dff9e9903c5ac64a5">SetProduct_strand</a> (void)</td></tr>
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||
<tr class="memdesc:ga78c834ecf9b7616dff9e9903c5ac64a5 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#ga78c834ecf9b7616dff9e9903c5ac64a5">More...</a><br /></td></tr>
|
||
<tr class="separator:ga78c834ecf9b7616dff9e9903c5ac64a5 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga934a960ffed84427fc57161eb496c87a inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga934a960ffed84427fc57161eb496c87a">IsSetGenomic_strand</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga934a960ffed84427fc57161eb496c87a inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Genomic_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#ga934a960ffed84427fc57161eb496c87a">More...</a><br /></td></tr>
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<tr class="separator:ga934a960ffed84427fc57161eb496c87a inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaf9c3fdd52a60a2c0750160f0f8e4c403 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaf9c3fdd52a60a2c0750160f0f8e4c403">CanGetGenomic_strand</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gaf9c3fdd52a60a2c0750160f0f8e4c403 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetGenomic_strand method. <a href="group__dataspec__NCBI__Seqalign.html#gaf9c3fdd52a60a2c0750160f0f8e4c403">More...</a><br /></td></tr>
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||
<tr class="separator:gaf9c3fdd52a60a2c0750160f0f8e4c403 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaa4a2a093bc597a5a5db1577d69926a19 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaa4a2a093bc597a5a5db1577d69926a19">ResetGenomic_strand</a> (void)</td></tr>
|
||
<tr class="memdesc:gaa4a2a093bc597a5a5db1577d69926a19 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Genomic_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#gaa4a2a093bc597a5a5db1577d69926a19">More...</a><br /></td></tr>
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||
<tr class="separator:gaa4a2a093bc597a5a5db1577d69926a19 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga71a8d55343a1878c41731b232e6d1dfe inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">TGenomic_strand</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga71a8d55343a1878c41731b232e6d1dfe">GetGenomic_strand</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga71a8d55343a1878c41731b232e6d1dfe inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Genomic_strand member data. <a href="group__dataspec__NCBI__Seqalign.html#ga71a8d55343a1878c41731b232e6d1dfe">More...</a><br /></td></tr>
|
||
<tr class="separator:ga71a8d55343a1878c41731b232e6d1dfe inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad71ac87d180425fc2d41caf10ec740ea inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gad71ac87d180425fc2d41caf10ec740ea">SetGenomic_strand</a> (<a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">TGenomic_strand</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="memdesc:gad71ac87d180425fc2d41caf10ec740ea inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Genomic_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#gad71ac87d180425fc2d41caf10ec740ea">More...</a><br /></td></tr>
|
||
<tr class="separator:gad71ac87d180425fc2d41caf10ec740ea inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae48b962837a1edc5abf7cfdb54170321 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">TGenomic_strand</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae48b962837a1edc5abf7cfdb54170321">SetGenomic_strand</a> (void)</td></tr>
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||
<tr class="memdesc:gae48b962837a1edc5abf7cfdb54170321 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Genomic_strand data member. <a href="group__dataspec__NCBI__Seqalign.html#gae48b962837a1edc5abf7cfdb54170321">More...</a><br /></td></tr>
|
||
<tr class="separator:gae48b962837a1edc5abf7cfdb54170321 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga11ffdc10dbab093cd08183bccfc95ba8 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga11ffdc10dbab093cd08183bccfc95ba8">IsSetProduct_type</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga11ffdc10dbab093cd08183bccfc95ba8 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Product_type data member. <a href="group__dataspec__NCBI__Seqalign.html#ga11ffdc10dbab093cd08183bccfc95ba8">More...</a><br /></td></tr>
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<tr class="separator:ga11ffdc10dbab093cd08183bccfc95ba8 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga574529dee06488d3ce87de8ae3aa679a inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga574529dee06488d3ce87de8ae3aa679a">CanGetProduct_type</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga574529dee06488d3ce87de8ae3aa679a inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetProduct_type method. <a href="group__dataspec__NCBI__Seqalign.html#ga574529dee06488d3ce87de8ae3aa679a">More...</a><br /></td></tr>
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||
<tr class="separator:ga574529dee06488d3ce87de8ae3aa679a inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga80483bffc4fc2aae79372e6bce4622df inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga80483bffc4fc2aae79372e6bce4622df">ResetProduct_type</a> (void)</td></tr>
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||
<tr class="memdesc:ga80483bffc4fc2aae79372e6bce4622df inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Product_type data member. <a href="group__dataspec__NCBI__Seqalign.html#ga80483bffc4fc2aae79372e6bce4622df">More...</a><br /></td></tr>
|
||
<tr class="separator:ga80483bffc4fc2aae79372e6bce4622df inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6c203f4f395285a0224731f2bc879fcc inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae951329dd75dc287fc1fa171e9d0977d">TProduct_type</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga6c203f4f395285a0224731f2bc879fcc">GetProduct_type</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga6c203f4f395285a0224731f2bc879fcc inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Product_type member data. <a href="group__dataspec__NCBI__Seqalign.html#ga6c203f4f395285a0224731f2bc879fcc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6c203f4f395285a0224731f2bc879fcc inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga9b49e6763a277388c76316a36dd00e29 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9b49e6763a277388c76316a36dd00e29">SetProduct_type</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gae951329dd75dc287fc1fa171e9d0977d">TProduct_type</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="memdesc:ga9b49e6763a277388c76316a36dd00e29 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_type data member. <a href="group__dataspec__NCBI__Seqalign.html#ga9b49e6763a277388c76316a36dd00e29">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9b49e6763a277388c76316a36dd00e29 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0c8951d1e8b65a8cc977659a4266cffc inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae951329dd75dc287fc1fa171e9d0977d">TProduct_type</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga0c8951d1e8b65a8cc977659a4266cffc">SetProduct_type</a> (void)</td></tr>
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<tr class="memdesc:ga0c8951d1e8b65a8cc977659a4266cffc inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_type data member. <a href="group__dataspec__NCBI__Seqalign.html#ga0c8951d1e8b65a8cc977659a4266cffc">More...</a><br /></td></tr>
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<tr class="separator:ga0c8951d1e8b65a8cc977659a4266cffc inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab41e438b262f0ec5fb5c317e11d610c1 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab41e438b262f0ec5fb5c317e11d610c1">IsSetExons</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gab41e438b262f0ec5fb5c317e11d610c1 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">set of segments involved each segment corresponds to one exon exons are always in biological order <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Exons data member. <a href="group__dataspec__NCBI__Seqalign.html#gab41e438b262f0ec5fb5c317e11d610c1">More...</a><br /></td></tr>
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<tr class="separator:gab41e438b262f0ec5fb5c317e11d610c1 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga49b1254e81aa1589641f4b5d68067c3a inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga49b1254e81aa1589641f4b5d68067c3a">CanGetExons</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga49b1254e81aa1589641f4b5d68067c3a inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetExons method. <a href="group__dataspec__NCBI__Seqalign.html#ga49b1254e81aa1589641f4b5d68067c3a">More...</a><br /></td></tr>
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<tr class="separator:ga49b1254e81aa1589641f4b5d68067c3a inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gafae210e9af3b5c6d5a9b8bb6a9c3e04d inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafae210e9af3b5c6d5a9b8bb6a9c3e04d">ResetExons</a> (void)</td></tr>
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<tr class="memdesc:gafae210e9af3b5c6d5a9b8bb6a9c3e04d inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Exons data member. <a href="group__dataspec__NCBI__Seqalign.html#gafae210e9af3b5c6d5a9b8bb6a9c3e04d">More...</a><br /></td></tr>
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<tr class="separator:gafae210e9af3b5c6d5a9b8bb6a9c3e04d inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga9e290ee6f9e5fada3e92c911e401fd74 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9d6d9401d5a30ab77653fdc4f1747b80">TExons</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9e290ee6f9e5fada3e92c911e401fd74">GetExons</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga9e290ee6f9e5fada3e92c911e401fd74 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Exons member data. <a href="group__dataspec__NCBI__Seqalign.html#ga9e290ee6f9e5fada3e92c911e401fd74">More...</a><br /></td></tr>
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||
<tr class="separator:ga9e290ee6f9e5fada3e92c911e401fd74 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga56162c6709bcd426704c7084a5faeada inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9d6d9401d5a30ab77653fdc4f1747b80">TExons</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga56162c6709bcd426704c7084a5faeada">SetExons</a> (void)</td></tr>
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<tr class="memdesc:ga56162c6709bcd426704c7084a5faeada inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Exons data member. <a href="group__dataspec__NCBI__Seqalign.html#ga56162c6709bcd426704c7084a5faeada">More...</a><br /></td></tr>
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<tr class="separator:ga56162c6709bcd426704c7084a5faeada inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5a4cf41054dbe878d8504432c714a5a3 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5a4cf41054dbe878d8504432c714a5a3">IsSetPoly_a</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga5a4cf41054dbe878d8504432c714a5a3 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">start of poly(A) tail on the transcript For sense transcripts: aligned product positions < poly-a <= product-length poly-a == product-length indicates inferred poly(A) tail at transcript's end For antisense transcripts: -1 <= poly-a < aligned product positions poly-a == -1 indicates inferred poly(A) tail at transcript's start <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Poly_a data member. <a href="group__dataspec__NCBI__Seqalign.html#ga5a4cf41054dbe878d8504432c714a5a3">More...</a><br /></td></tr>
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<tr class="separator:ga5a4cf41054dbe878d8504432c714a5a3 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gada8554baad582e7bdfcf1b3eaa0a3618 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gada8554baad582e7bdfcf1b3eaa0a3618">CanGetPoly_a</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gada8554baad582e7bdfcf1b3eaa0a3618 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetPoly_a method. <a href="group__dataspec__NCBI__Seqalign.html#gada8554baad582e7bdfcf1b3eaa0a3618">More...</a><br /></td></tr>
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<tr class="separator:gada8554baad582e7bdfcf1b3eaa0a3618 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6af952ffce2eb72bb50b64cfd7711315 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga6af952ffce2eb72bb50b64cfd7711315">ResetPoly_a</a> (void)</td></tr>
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||
<tr class="memdesc:ga6af952ffce2eb72bb50b64cfd7711315 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Poly_a data member. <a href="group__dataspec__NCBI__Seqalign.html#ga6af952ffce2eb72bb50b64cfd7711315">More...</a><br /></td></tr>
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||
<tr class="separator:ga6af952ffce2eb72bb50b64cfd7711315 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad34b8db8caf4e6bf8b3960189eecf34f inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga289b14577fe726ae038e3fad21bebb0f">TPoly_a</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gad34b8db8caf4e6bf8b3960189eecf34f">GetPoly_a</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gad34b8db8caf4e6bf8b3960189eecf34f inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Poly_a member data. <a href="group__dataspec__NCBI__Seqalign.html#gad34b8db8caf4e6bf8b3960189eecf34f">More...</a><br /></td></tr>
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||
<tr class="separator:gad34b8db8caf4e6bf8b3960189eecf34f inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga9ffe53be454e051be7a525b162406d23 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9ffe53be454e051be7a525b162406d23">SetPoly_a</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#ga289b14577fe726ae038e3fad21bebb0f">TPoly_a</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga9ffe53be454e051be7a525b162406d23 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Poly_a data member. <a href="group__dataspec__NCBI__Seqalign.html#ga9ffe53be454e051be7a525b162406d23">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9ffe53be454e051be7a525b162406d23 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab9857d28abbe9d14303cd0310cf0e9ef inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga289b14577fe726ae038e3fad21bebb0f">TPoly_a</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab9857d28abbe9d14303cd0310cf0e9ef">SetPoly_a</a> (void)</td></tr>
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||
<tr class="memdesc:gab9857d28abbe9d14303cd0310cf0e9ef inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Poly_a data member. <a href="group__dataspec__NCBI__Seqalign.html#gab9857d28abbe9d14303cd0310cf0e9ef">More...</a><br /></td></tr>
|
||
<tr class="separator:gab9857d28abbe9d14303cd0310cf0e9ef inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gace32533969ca381b5fd81ce5262550fe inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gace32533969ca381b5fd81ce5262550fe">IsSetProduct_length</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gace32533969ca381b5fd81ce5262550fe inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">length of the product, in bases/residues from this (or from poly-a if present), a 3' unaligned length can be extracted <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Product_length data member. <a href="group__dataspec__NCBI__Seqalign.html#gace32533969ca381b5fd81ce5262550fe">More...</a><br /></td></tr>
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||
<tr class="separator:gace32533969ca381b5fd81ce5262550fe inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0e78ebe035fdf51a6f945cb0b7ad2b83 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga0e78ebe035fdf51a6f945cb0b7ad2b83">CanGetProduct_length</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga0e78ebe035fdf51a6f945cb0b7ad2b83 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetProduct_length method. <a href="group__dataspec__NCBI__Seqalign.html#ga0e78ebe035fdf51a6f945cb0b7ad2b83">More...</a><br /></td></tr>
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||
<tr class="separator:ga0e78ebe035fdf51a6f945cb0b7ad2b83 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga57ab672e75490a8694f174e4e70e5687 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga57ab672e75490a8694f174e4e70e5687">ResetProduct_length</a> (void)</td></tr>
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||
<tr class="memdesc:ga57ab672e75490a8694f174e4e70e5687 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Product_length data member. <a href="group__dataspec__NCBI__Seqalign.html#ga57ab672e75490a8694f174e4e70e5687">More...</a><br /></td></tr>
|
||
<tr class="separator:ga57ab672e75490a8694f174e4e70e5687 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5669b6158017f2ffab7c8ba24c6c2d4e inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga049a519cc6a6ac660a9bb228852c6b16">TProduct_length</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5669b6158017f2ffab7c8ba24c6c2d4e">GetProduct_length</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga5669b6158017f2ffab7c8ba24c6c2d4e inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Product_length member data. <a href="group__dataspec__NCBI__Seqalign.html#ga5669b6158017f2ffab7c8ba24c6c2d4e">More...</a><br /></td></tr>
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<tr class="separator:ga5669b6158017f2ffab7c8ba24c6c2d4e inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga626460f4d82e53c2b99155993f4edc58 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga626460f4d82e53c2b99155993f4edc58">SetProduct_length</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#ga049a519cc6a6ac660a9bb228852c6b16">TProduct_length</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="memdesc:ga626460f4d82e53c2b99155993f4edc58 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_length data member. <a href="group__dataspec__NCBI__Seqalign.html#ga626460f4d82e53c2b99155993f4edc58">More...</a><br /></td></tr>
|
||
<tr class="separator:ga626460f4d82e53c2b99155993f4edc58 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4c1a153259030754abf1e018a6c347a5 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga049a519cc6a6ac660a9bb228852c6b16">TProduct_length</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga4c1a153259030754abf1e018a6c347a5">SetProduct_length</a> (void)</td></tr>
|
||
<tr class="memdesc:ga4c1a153259030754abf1e018a6c347a5 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Product_length data member. <a href="group__dataspec__NCBI__Seqalign.html#ga4c1a153259030754abf1e018a6c347a5">More...</a><br /></td></tr>
|
||
<tr class="separator:ga4c1a153259030754abf1e018a6c347a5 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6b763dcabbeebb7400822806a045689d inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga6b763dcabbeebb7400822806a045689d">IsSetModifiers</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga6b763dcabbeebb7400822806a045689d inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">alignment descriptors / modifiers this provides us a set for extension <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Modifiers data member. <a href="group__dataspec__NCBI__Seqalign.html#ga6b763dcabbeebb7400822806a045689d">More...</a><br /></td></tr>
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||
<tr class="separator:ga6b763dcabbeebb7400822806a045689d inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5c76789818fd6e31900c0d0a773faafd inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5c76789818fd6e31900c0d0a773faafd">CanGetModifiers</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga5c76789818fd6e31900c0d0a773faafd inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetModifiers method. <a href="group__dataspec__NCBI__Seqalign.html#ga5c76789818fd6e31900c0d0a773faafd">More...</a><br /></td></tr>
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<tr class="separator:ga5c76789818fd6e31900c0d0a773faafd inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaedacf1db915609f7b6932586b3f685ad inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaedacf1db915609f7b6932586b3f685ad">ResetModifiers</a> (void)</td></tr>
|
||
<tr class="memdesc:gaedacf1db915609f7b6932586b3f685ad inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Modifiers data member. <a href="group__dataspec__NCBI__Seqalign.html#gaedacf1db915609f7b6932586b3f685ad">More...</a><br /></td></tr>
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<tr class="separator:gaedacf1db915609f7b6932586b3f685ad inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae70a1937fa2c741d1806328a19c600a9 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#ga889e52b059e6d820c682a1275a3f9469">TModifiers</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae70a1937fa2c741d1806328a19c600a9">GetModifiers</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae70a1937fa2c741d1806328a19c600a9 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Modifiers member data. <a href="group__dataspec__NCBI__Seqalign.html#gae70a1937fa2c741d1806328a19c600a9">More...</a><br /></td></tr>
|
||
<tr class="separator:gae70a1937fa2c741d1806328a19c600a9 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0d18901b42d100b0ba1f8b6d58857ef6 inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga889e52b059e6d820c682a1275a3f9469">TModifiers</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga0d18901b42d100b0ba1f8b6d58857ef6">SetModifiers</a> (void)</td></tr>
|
||
<tr class="memdesc:ga0d18901b42d100b0ba1f8b6d58857ef6 inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Modifiers data member. <a href="group__dataspec__NCBI__Seqalign.html#ga0d18901b42d100b0ba1f8b6d58857ef6">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0d18901b42d100b0ba1f8b6d58857ef6 inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacf5c99fa11a3e615745ab63ff65ec3bd inherit pub_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gacf5c99fa11a3e615745ab63ff65ec3bd">Reset</a> (void)</td></tr>
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||
<tr class="memdesc:gacf5c99fa11a3e615745ab63ff65ec3bd inherit pub_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset the whole object. <a href="group__dataspec__NCBI__Seqalign.html#gacf5c99fa11a3e615745ab63ff65ec3bd">More...</a><br /></td></tr>
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||
<tr class="separator:gacf5c99fa11a3e615745ab63ff65ec3bd inherit pub_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
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||
<tr class="memitem:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga8575b1015c4a4f3336b6e1c0a4324b71">CSerialObject</a> (void)</td></tr>
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<tr class="separator:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gaf278b96157abad20b5d944fb83d32fb1">~CSerialObject</a> (void)</td></tr>
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<tr class="separator:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCTypeInfo.html">CTypeInfo</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacb5d8a2e6878e58aeaeaf342081f0b7f">GetThisTypeInfo</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> =0</td></tr>
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||
<tr class="separator:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">Assign</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &source, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>)</td></tr>
|
||
<tr class="memdesc:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Set object to copy of another one. <a href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">More...</a><br /></td></tr>
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||
<tr class="separator:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">Equals</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &object, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if both objects contain the same values. <a href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">More...</a><br /></td></tr>
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||
<tr class="separator:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">DebugDump</a> (<a class="el" href="classCDebugDumpContext.html">CDebugDumpContext</a> ddc, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method for dumping debug information. <a href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">More...</a><br /></td></tr>
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||
<tr class="separator:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga7382b4cd30306d9444f85abd912ff61e">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab5506012856f3627d88368a24e1eb254">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char *<a class="el" href="dbapi__sample__base_8hpp.html#a8334353b550f5c3b6d2ea57d716ab2e2">file_name</a>, <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> file_line) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="separator:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">HasNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object data type has namespace name. <a href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">More...</a><br /></td></tr>
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||
<tr class="separator:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">GetNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace name. <a href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">More...</a><br /></td></tr>
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||
<tr class="separator:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">HasNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if data type has namespace prefix. <a href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">More...</a><br /></td></tr>
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<tr class="separator:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">GetNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace prefix. <a href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">More...</a><br /></td></tr>
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||
<tr class="separator:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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||
<tr class="memitem:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">CObject</a> (void)</td></tr>
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||
<tr class="memdesc:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">More...</a><br /></td></tr>
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<tr class="separator:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">CObject</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src)</td></tr>
|
||
<tr class="memdesc:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">More...</a><br /></td></tr>
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<tr class="separator:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">~CObject</a> (void)</td></tr>
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||
<tr class="memdesc:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">More...</a><br /></td></tr>
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<tr class="separator:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCObject.html">CObject</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src) <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
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||
<tr class="memdesc:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">More...</a><br /></td></tr>
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<tr class="separator:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">CanBeDeleted</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
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||
<tr class="memdesc:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object can be deleted. <a href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">More...</a><br /></td></tr>
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<tr class="separator:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">IsAllocatedInPool</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is allocated in memory pool (not system heap) <a href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">Referenced</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced. <a href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">ReferencedOnlyOnce</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced only once. <a href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">More...</a><br /></td></tr>
|
||
<tr class="separator:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">AddReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Add reference to object. <a href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">RemoveReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference to object. <a href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">More...</a><br /></td></tr>
|
||
<tr class="separator:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">ReleaseReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference without deleting object. <a href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">DoNotDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as not allocated in heap – do not delete this object. <a href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">More...</a><br /></td></tr>
|
||
<tr class="separator:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">DoDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as allocated in heap – object can be deleted. <a href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator for memory allocation. <a href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">operator new[]</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new[] operator for 'array' memory allocation. <a href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">More...</a><br /></td></tr>
|
||
<tr class="separator:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">operator delete</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator for memory deallocation. <a href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">More...</a><br /></td></tr>
|
||
<tr class="separator:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">operator delete[]</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete[] operator for memory deallocation. <a href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, void *place)</td></tr>
|
||
<tr class="memdesc:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator. <a href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">operator delete</a> (void *ptr, void *place)</td></tr>
|
||
<tr class="memdesc:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">More...</a><br /></td></tr>
|
||
<tr class="separator:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator using memory pool. <a href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">operator delete</a> (void *ptr, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
|
||
<tr class="memitem:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ae8723856215191ef748f19ff73e8ba4e">CDebugDumpable</a> (void)</td></tr>
|
||
<tr class="separator:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#acdeaaedfabb4cc4a64108dbb854f4b51">~CDebugDumpable</a> (void)</td></tr>
|
||
<tr class="separator:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a4ff9ec248a38f17b7d8deb3f78318a37">DebugDumpText</a> (ostream &<a class="el" href="events__unit__test_8cpp.html#ac3c18c078fe416626b6c1dcc3e780245">out</a>, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#aa0101dfdc0ae0cbd0cb1609c96f96229">DebugDumpFormat</a> (<a class="el" href="classCDebugDumpFormatter.html">CDebugDumpFormatter</a> &ddf, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a19047c92521e5f3ad2a14bab26a49b51">DumpToConsole</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-types"></a>
|
||
Private Types</h2></td></tr>
|
||
<tr class="memitem:ade5652a0bc79deef379f38391d06b657"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSpliced__seg__Base.html">CSpliced_seg_Base</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#ade5652a0bc79deef379f38391d06b657">Tparent</a></td></tr>
|
||
<tr class="separator:ade5652a0bc79deef379f38391d06b657"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
|
||
Private Member Functions</h2></td></tr>
|
||
<tr class="memitem:a5fc4aef2815af3560f893e5a3fda88f4"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#a5fc4aef2815af3560f893e5a3fda88f4">CSpliced_seg</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSpliced__seg.html">CSpliced_seg</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:a5fc4aef2815af3560f893e5a3fda88f4"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:af62b5782f1ddebca288bd02f5341c7ff"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCSpliced__seg.html">CSpliced_seg</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCSpliced__seg.html#af62b5782f1ddebca288bd02f5341c7ff">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSpliced__seg.html">CSpliced_seg</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:af62b5782f1ddebca288bd02f5341c7ff"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
|
||
Additional Inherited Members</h2></td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCSpliced__seg__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCSpliced__seg__Base')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCSpliced__seg__Base.html">CSpliced_seg_Base</a></td></tr>
|
||
<tr class="memitem:gafc859fbeab6c06858215b52963709c41 inherit pub_static_methods_classCSpliced__seg__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> NCBI_NS_NCBI::CEnumeratedTypeValues *<a class="el" href="group__GenClassSupport.html#gaab9bc228ca2014a5451d4a8d47bee150">ENUM_METHOD_NAME</a>() </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc859fbeab6c06858215b52963709c41">EProduct_type</a> (void)</td></tr>
|
||
<tr class="memdesc:gafc859fbeab6c06858215b52963709c41 inherit pub_static_methods_classCSpliced__seg__Base"><td class="mdescLeft"> </td><td class="mdescRight">Access to EProduct_type's attributes (values, names) as defined in spec. <a href="group__dataspec__NCBI__Seqalign.html#gafc859fbeab6c06858215b52963709c41">More...</a><br /></td></tr>
|
||
<tr class="separator:gafc859fbeab6c06858215b52963709c41 inherit pub_static_methods_classCSpliced__seg__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab2a92c7a5b5900317294b85e854db07e">SetVerifyDataThread</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga2e3bead397d7ec0fffde866cd890267e">SetVerifyDataGlobal</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gada3dbb83951d0bed9bde06c6c4ede9e2">UnassignedString</a> (void)</td></tr>
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||
<tr class="separator:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__STL.html#ga88e22aab83a29bae20f5354e89b041e3">CStringUTF8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga123d82fb69550b6418ad5d69e752873a">UnassignedStringUTF8</a> (void)</td></tr>
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||
<tr class="separator:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga1d897c6ce0f541df2487600cedd9f40a">UnassignedByte</a> (void)</td></tr>
|
||
<tr class="separator:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">ThrowNullPointerException</a> (void)</td></tr>
|
||
<tr class="memdesc:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method to throw null pointer exception. <a href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">More...</a><br /></td></tr>
|
||
<tr class="separator:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae042a181e665dd40945c1c1a7a6bc5d1">ThrowNullPointerException</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> type_info &<a class="el" href="structtype.html">type</a>)</td></tr>
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||
<tr class="separator:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga4b6f1beef2a1f37c68f7f3b1aac471d8">GetAllocFillMode</a> (void)</td></tr>
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||
<tr class="separator:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga42eceef165a83cc081837a373ab6dd67">SetAllocFillMode</a> (<a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> <a class="el" href="mdb__load_8c.html#a1ea5d0cb93f22f7d0fdf804bd68c3326">mode</a>)</td></tr>
|
||
<tr class="separator:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">SetAllocFillMode</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Set mode from configuration parameter value. <a href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">More...</a><br /></td></tr>
|
||
<tr class="separator:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_static_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
|
||
<tr class="memitem:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ab6ba54280c562230f65733cca0560c83">EnableDebugDump</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> on)</td></tr>
|
||
<tr class="separator:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_attribs_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacf732f6a9f64037d0cad32a72f7522ea">ms_UnassignedStr</a> = "<*unassigned*>"</td></tr>
|
||
<tr class="separator:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6baaf827f8d2e4f98be84d91d511a716">ms_UnassignedByte</a> = char(0xcd)</td></tr>
|
||
<tr class="separator:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_attribs_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">eCounterBitsCanBeDeleted</a> = 1 << 0</td></tr>
|
||
<tr class="memdesc:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define possible object states. <a href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">eCounterBitsInPlainHeap</a> = 1 << 1</td></tr>
|
||
<tr class="memdesc:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Heap signature was found. <a href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">More...</a><br /></td></tr>
|
||
<tr class="separator:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">eCounterBitsPlaceMask</a></td></tr>
|
||
<tr class="memdesc:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mask for 'in heap' state flags. <a href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">More...</a><br /></td></tr>
|
||
<tr class="separator:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">eCounterStep</a> = 1 << 2</td></tr>
|
||
<tr class="memdesc:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Skip over the "in heap" bits. <a href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">eCounterValid</a> = <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>(1) << (sizeof(<a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>) * 8 - 2)</td></tr>
|
||
<tr class="memdesc:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Minimal value for valid objects (reference counter is zero) Must be a single bit value. <a href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">More...</a><br /></td></tr>
|
||
<tr class="separator:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">eCounterStateMask</a></td></tr>
|
||
<tr class="memdesc:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Valid object, and object in heap. <a href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">More...</a><br /></td></tr>
|
||
<tr class="separator:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pro_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classCObject')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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<tr class="memitem:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">DeleteThis</a> (void)</td></tr>
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<tr class="memdesc:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Virtual method "deleting" this object. <a href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">More...</a><br /></td></tr>
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<tr class="separator:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8hpp_source.html#l00056">56</a> of file <a class="el" href="Spliced__seg_8hpp_source.html">Spliced_seg.hpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a29d414646ccc2efd7c6e077d011d9c4a">◆ </a></span>TDim</h2>
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<td class="memname">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">CSpliced_seg::TDim</a></td>
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<p>types </p>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8hpp_source.html#l00066">66</a> of file <a class="el" href="Spliced__seg_8hpp_source.html">Spliced_seg.hpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ade5652a0bc79deef379f38391d06b657">◆ </a></span>Tparent</h2>
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<td class="memname">typedef <a class="el" href="classCSpliced__seg__Base.html">CSpliced_seg_Base</a> <a class="el" href="classCSpliced__seg.html#ade5652a0bc79deef379f38391d06b657">CSpliced_seg::Tparent</a></td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8hpp_source.html#l00058">58</a> of file <a class="el" href="Spliced__seg_8hpp_source.html">Spliced_seg.hpp</a>.</p>
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<h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a0483d0b8a3446d0f53222b11ede94838">◆ </a></span>CSpliced_seg() <span class="overload">[1/2]</span></h2>
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<td class="memname">CSpliced_seg::CSpliced_seg </td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8hpp_source.html#l00099">99</a> of file <a class="el" href="Spliced__seg_8hpp_source.html">Spliced_seg.hpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a477d0787500ad1663b2b2a612dd32847">◆ </a></span>~CSpliced_seg()</h2>
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<td class="memname">CSpliced_seg::~CSpliced_seg </td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00050">50</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a5fc4aef2815af3560f893e5a3fda88f4">◆ </a></span>CSpliced_seg() <span class="overload">[2/2]</span></h2>
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<td class="memname">CSpliced_seg::CSpliced_seg </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSpliced__seg.html">CSpliced_seg</a> & </td>
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<h2 class="groupheader">Member Function Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#ab1bf12cd69faa35e3c1016344f426565">◆ </a></span>AsDiscSeg()</h2>
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<td class="memname"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSeq__align.html">CSeq_align</a> > CSpliced_seg::AsDiscSeg </td>
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<p><a class="el" href="namespaceConvert.html">Convert</a> this alignment to a discontinuous segment. </p>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00492">492</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Na__strand___8hpp_source.html#l00066">eNa_strand_plus</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00093">CSpliced_seg_Base::eProduct_type_protein</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00092">CSpliced_seg_Base::eProduct_type_transcript</a>, <a class="el" href="Seq__align___8hpp_source.html#l00104">CSeq_align_Base::eType_disc</a>, <a class="el" href="Seq__align___8hpp_source.html#l00103">CSeq_align_Base::eType_partial</a>, <a class="el" href="group__GenClassSupport.html#ggae820720c5bbb78691337c9dfa21adf60a64c3acc11ffdb1be30ea339290bd1508">eUnknown</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00530">CSpliced_seg_Base::GetGenomic_id()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00605">CSpliced_seg_Base::GetGenomic_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00509">CSpliced_seg_Base::GetProduct_id()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00558">CSpliced_seg_Base::GetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00652">CSpliced_seg_Base::GetProduct_type()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00586">CSpliced_seg_Base::IsSetGenomic_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00539">CSpliced_seg_Base::IsSetProduct_strand()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="Spliced__seg_8cpp_source.html#l00394">s_ExonToDenseg()</a>, <a class="el" href="Seq__align___8cpp_source.html#l00310">CSeq_align_Base::SetSegs()</a>, <a class="el" href="Seq__align___8hpp_source.html#l00818">CSeq_align_Base::SetType()</a>, and <a class="el" href="Dense__seg_8hpp_source.html#l00217">CDense_seg::SetWidths()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="feature__propagate_8cpp_source.html#l00093">CFeaturePropagator::CFeaturePropagator()</a>, <a class="el" href="Seq__align_8cpp_source.html#l01596">s_GetIndels()</a>, and <a class="el" href="cigar__formatter_8cpp_source.html#l00084">CCIGAR_Formatter::x_FormatAlignmentRows()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a7b607dd5d7993dbee5f93f1d39b68d38">◆ </a></span>CheckNumRows()</h2>
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<td class="memname"><a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> CSpliced_seg::CheckNumRows </td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8hpp_source.html#l00070">70</a> of file <a class="el" href="Spliced__seg_8hpp_source.html">Spliced_seg.hpp</a>.</p>
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<p class="reference">Referenced by <a class="el" href="alnspan__vertmodel_8cpp_source.html#l00282">CAlnSpanVertModel::x_Init()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a54782b8616beac708870b7f7f75c4b8f">◆ </a></span>GetSeqRange()</h2>
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<td class="memname"><a class="el" href="classCRange.html">CRange</a>< <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> > CSpliced_seg::GetSeqRange </td>
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<td class="paramname"><em>row</em></td><td>)</td>
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<p>GetSeqRange <a class="el" href="classNB.html">NB</a>: In case the product-type is protein, these only return the amin part of Prot-pos. </p>
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<p>The frame is ignored. </p>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00299">299</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00093">CSpliced_seg_Base::eProduct_type_protein</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00092">CSpliced_seg_Base::eProduct_type_transcript</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00652">CSpliced_seg_Base::GetProduct_type()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="token2_8c_source.html#l00020">result</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Seq__align_8cpp_source.html#l00153">CSeq_align::GetSeqRange()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a800668c69939a8f960bd23ea44e995dc">◆ </a></span>GetSeqStart()</h2>
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<td class="memname"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> CSpliced_seg::GetSeqStart </td>
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<td class="paramname"><em>row</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00348">348</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Na__strand___8hpp_source.html#l00067">eNa_strand_minus</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Range___8hpp_source.html#l00222">CRange_Base::GetFrom()</a>, <a class="el" href="Spliced__exon_8cpp_source.html#l00106">CSpliced_exon::GetRowSeq_range()</a>, <a class="el" href="Spliced__seg_8cpp_source.html#l00056">GetSeqStrand()</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Seq__align_8cpp_source.html#l00252">CSeq_align::GetSeqStart()</a>, <a class="el" href="objcoords_8cpp_source.html#l00722">CReportEntry::SetAlignment()</a>, <a class="el" href="alnspan__vertmodel_8cpp_source.html#l00981">CAlnSpanVertModel::x_PopulateRowsSpliced()</a>, and <a class="el" href="psl__record_8cpp_source.html#l00171">CPslRecord::xInitializeSequenceInfo()</a>.</p>
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<td class="memname"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> CSpliced_seg::GetSeqStop </td>
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<td>(</td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00357">357</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Na__strand___8hpp_source.html#l00067">eNa_strand_minus</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Spliced__exon_8cpp_source.html#l00106">CSpliced_exon::GetRowSeq_range()</a>, <a class="el" href="Spliced__seg_8cpp_source.html#l00056">GetSeqStrand()</a>, <a class="el" href="Range___8hpp_source.html#l00269">CRange_Base::GetTo()</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Seq__align_8cpp_source.html#l00273">CSeq_align::GetSeqStop()</a>, <a class="el" href="objcoords_8cpp_source.html#l00722">CReportEntry::SetAlignment()</a>, <a class="el" href="alnspan__vertmodel_8cpp_source.html#l00981">CAlnSpanVertModel::x_PopulateRowsSpliced()</a>, and <a class="el" href="psl__record_8cpp_source.html#l00171">CPslRecord::xInitializeSequenceInfo()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aa0ce331eb5fd5ac0282fafb87ee54297">◆ </a></span>GetSeqStrand()</h2>
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<td class="memname"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> CSpliced_seg::GetSeqStrand </td>
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<td class="paramtype"><a class="el" href="classCSpliced__seg.html#a29d414646ccc2efd7c6e077d011d9c4a">TDim</a> </td>
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<td class="paramname"><em>row</em></td><td>)</td>
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<td> const</td>
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<p>Get strand (the first one if segments have different strands). </p>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00056">56</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Spliced__seg___8hpp_source.html#l00592">CSpliced_seg_Base::CanGetGenomic_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00545">CSpliced_seg_Base::CanGetProduct_strand()</a>, <a class="el" href="Na__strand___8hpp_source.html#l00065">eNa_strand_unknown</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00605">CSpliced_seg_Base::GetGenomic_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00558">CSpliced_seg_Base::GetProduct_strand()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Spliced__seg_8cpp_source.html#l00348">GetSeqStart()</a>, <a class="el" href="Spliced__seg_8cpp_source.html#l00357">GetSeqStop()</a>, <a class="el" href="Seq__align_8cpp_source.html#l00294">CSeq_align::GetSeqStrand()</a>, <a class="el" href="alignment__glyph_8cpp_source.html#l00850">CAlignGlyph::x_DrawNonConsensusSpliceSites()</a>, and <a class="el" href="alnspan__vertmodel_8cpp_source.html#l00981">CAlnSpanVertModel::x_PopulateRowsSpliced()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a701e3fb09e7b03cdd4cbaf81acb15aa0">◆ </a></span>IsConsistentBiologicalOrder()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CSpliced_seg::IsConsistentBiologicalOrder </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<td class="paramname"></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00088">88</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Spliced__exon___8hpp_source.html#l00937">CSpliced_exon_Base::CanGetGenomic_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00592">CSpliced_seg_Base::CanGetGenomic_strand()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00890">CSpliced_exon_Base::CanGetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00545">CSpliced_seg_Base::CanGetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00814">CSpliced_exon_Base::GetGenomic_end()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00767">CSpliced_exon_Base::GetGenomic_start()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00950">CSpliced_exon_Base::GetGenomic_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00605">CSpliced_seg_Base::GetGenomic_strand()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00730">CSpliced_exon_Base::GetProduct_end()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00700">CSpliced_exon_Base::GetProduct_start()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00903">CSpliced_exon_Base::GetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00558">CSpliced_seg_Base::GetProduct_strand()</a>, <a class="el" href="Product__pos___8hpp_source.html#l00260">CProduct_pos_Base::IsNucpos()</a>, <a class="el" href="Na__strand_8hpp_source.html#l00075">IsReverse()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l00878">kInvalidSeqPos</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#af62b5782f1ddebca288bd02f5341c7ff">◆ </a></span>operator=()</h2>
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<td class="memname"><a class="el" href="classCSpliced__seg.html">CSpliced_seg</a>& CSpliced_seg::operator= </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSpliced__seg.html">CSpliced_seg</a> & </td>
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<td class="paramname"><em>value</em></td><td>)</td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<h2 class="memtitle"><span class="permalink"><a href="#a9beac393f048eaae409622c0ee5eea99">◆ </a></span>Validate()</h2>
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<td class="memname">void CSpliced_seg::Validate </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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<td class="paramname"><em>full_test</em> = <code><a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a></code></td><td>)</td>
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<td> const</td>
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<p>Validators. </p>
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<p class="definition">Definition at line <a class="el" href="Spliced__seg_8cpp_source.html#l00159">159</a> of file <a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Product__pos_8cpp_source.html#l00056">CProduct_pos::AsSeqPos()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00890">CSpliced_exon_Base::CanGetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00545">CSpliced_seg_Base::CanGetProduct_strand()</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00089">CSpliced_exon_chunk_Base::e_Diag</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00091">CSpliced_exon_chunk_Base::e_Genomic_ins</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00087">CSpliced_exon_chunk_Base::e_Match</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00088">CSpliced_exon_chunk_Base::e_Mismatch</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00090">CSpliced_exon_chunk_Base::e_Product_ins</a>, <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="Na__strand___8hpp_source.html#l00067">eNa_strand_minus</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00093">CSpliced_seg_Base::eProduct_type_protein</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00410">CSpliced_exon_chunk_Base::GetDiag()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00692">CSpliced_seg_Base::GetExons()</a>, <a class="el" href="Range___8hpp_source.html#l00222">CRange_Base::GetFrom()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00814">CSpliced_exon_Base::GetGenomic_end()</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00464">CSpliced_exon_chunk_Base::GetGenomic_ins()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00767">CSpliced_exon_Base::GetGenomic_start()</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00356">CSpliced_exon_chunk_Base::GetMatch()</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00383">CSpliced_exon_chunk_Base::GetMismatch()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00990">CSpliced_exon_Base::GetParts()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00724">CSpliced_seg_Base::GetPoly_a()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00730">CSpliced_exon_Base::GetProduct_end()</a>, <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00437">CSpliced_exon_chunk_Base::GetProduct_ins()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00771">CSpliced_seg_Base::GetProduct_length()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00700">CSpliced_exon_Base::GetProduct_start()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00903">CSpliced_exon_Base::GetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00558">CSpliced_seg_Base::GetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00652">CSpliced_seg_Base::GetProduct_type()</a>, <a class="el" href="Range___8hpp_source.html#l00269">CRange_Base::GetTo()</a>, <a class="el" href="range_8hpp_source.html#l00272">COpenRange< TSeqPos >::GetWhole()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00863">CSpliced_exon_Base::IsSetGenomic_id()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00518">CSpliced_seg_Base::IsSetGenomic_id()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00978">CSpliced_exon_Base::IsSetParts()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00705">CSpliced_seg_Base::IsSetPoly_a()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00842">CSpliced_exon_Base::IsSetProduct_id()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00497">CSpliced_seg_Base::IsSetProduct_id()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00752">CSpliced_seg_Base::IsSetProduct_length()</a>, <a class="el" href="Spliced__exon___8hpp_source.html#l00884">CSpliced_exon_Base::IsSetProduct_strand()</a>, <a class="el" href="Spliced__seg___8hpp_source.html#l00539">CSpliced_seg_Base::IsSetProduct_strand()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="asn2flat_8cpp.html#afe31d0544776ce2d3dadaa5c50cab832a02a42284998e2ce6a3776ad3696dceed">prot</a>, <a class="el" href="Range___8hpp_source.html#l00231">CRange_Base::SetFrom()</a>, <a class="el" href="Range___8hpp_source.html#l00278">CRange_Base::SetTo()</a>, and <a class="el" href="Spliced__exon__chunk___8hpp_source.html#l00321">CSpliced_exon_chunk_Base::Which()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="aln__generators_8cpp_source.html#l00502">InitSplicedsegFromPairwiseAln()</a>, <a class="el" href="blast__seqalign_8cpp_source.html#l00453">MakeSplicedSeg()</a>, and <a class="el" href="Seq__align_8cpp_source.html#l00649">CSeq_align::Validate()</a>.</p>
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<hr/>The documentation for this class was generated from the following files:<ul>
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<li>include/objects/seqalign/<a class="el" href="Spliced__seg_8hpp_source.html">Spliced_seg.hpp</a></li>
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<li>src/objects/seqalign/<a class="el" href="Spliced__seg_8cpp_source.html">Spliced_seg.cpp</a></li>
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Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.0
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</small></address>
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<address style="align: right;"><small>Modified on Fri Sep 20 14:57:10 2024 by modify_doxy.py rev. 669887</small></address>
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