1063 lines
156 KiB
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1063 lines
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<a href="#pub-methods">Public Member Functions</a> |
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<a class="el" href = "https://www.ncbi.nlm.nih.gov/toolkitbookgh/?term=CPssm">Search Toolkit Book for <i>CPssm</i></a>
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<p><code>#include <<a class="el" href="Pssm_8hpp_source.html">objects/scoremat/Pssm.hpp</a>></code></p>
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<img id="dynsection-0-trigger" src="closed.png" alt="+"/> Inheritance diagram for CPssm:</div>
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<div class="center"><img src="img__inherit__graph/classCPssm__inherit__graph.png" border="0" usemap="#aCPssm_inherit__map" alt="Inheritance graph"/></div>
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<img id="dynsection-1-trigger" src="closed.png" alt="+"/> Collaboration diagram for CPssm:</div>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr class="memitem:aec8b56075fd9a70575575415f91435a4"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#aec8b56075fd9a70575575415f91435a4">CPssm</a> (void)</td></tr>
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<tr class="memitem:a621a814e786baddc04174800e37f6508"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a621a814e786baddc04174800e37f6508">~CPssm</a> (void)</td></tr>
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<tr class="separator:a621a814e786baddc04174800e37f6508"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ada0fdcb55d4415849977a0e605d864ba"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__String.html#ga092e2fa4042726a7b28289e3fadea5f7">SIZE_TYPE</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#ada0fdcb55d4415849977a0e605d864ba">GetQueryLength</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ada0fdcb55d4415849977a0e605d864ba"><td class="mdescLeft"> </td><td class="mdescRight">Return the query length or 0 if no query is available. <a href="classCPssm.html#ada0fdcb55d4415849977a0e605d864ba">More...</a><br /></td></tr>
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<tr class="separator:ada0fdcb55d4415849977a0e605d864ba"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a40fd611105508637388817aea9fb7c1e"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a40fd611105508637388817aea9fb7c1e">GetQuerySequenceData</a> (<a class="el" href="classCNCBIstdaa.html">CNCBIstdaa</a> &sequence) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:a40fd611105508637388817aea9fb7c1e"><td class="mdescLeft"> </td><td class="mdescRight">Retrieve the query sequence data in ncbistdaa format. <a href="classCPssm.html#a40fd611105508637388817aea9fb7c1e">More...</a><br /></td></tr>
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<tr class="separator:a40fd611105508637388817aea9fb7c1e"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aa80b051f75e71cfc428b0fb025be25e2"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#aa80b051f75e71cfc428b0fb025be25e2">GetLambda</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:aa80b051f75e71cfc428b0fb025be25e2"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a37e1c2a8e099398905c162821754c4a9"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a37e1c2a8e099398905c162821754c4a9">GetKappa</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a37e1c2a8e099398905c162821754c4a9"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a189e012cdb36dffd2149cee3220db192"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a189e012cdb36dffd2149cee3220db192">GetH</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a189e012cdb36dffd2149cee3220db192"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a75a940fa8076e741306c7938151eae4d"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a75a940fa8076e741306c7938151eae4d">GetLambdaUngapped</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a3af24759aa19792e5006c1ca30cce233"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a3af24759aa19792e5006c1ca30cce233">GetKappaUngapped</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a3af24759aa19792e5006c1ca30cce233"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a85afde4bdc5764ddd4185f70e3f0112b"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a85afde4bdc5764ddd4185f70e3f0112b">GetHUngapped</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a85afde4bdc5764ddd4185f70e3f0112b"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:af5e11cbb4081651567bed4947b95aeeb"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#af5e11cbb4081651567bed4947b95aeeb">SetLambda</a> (double <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:ad82794dd238dcd21eb59141ec18a0d5e"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#ad82794dd238dcd21eb59141ec18a0d5e">SetKappa</a> (double <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:a3633131b026372cf19e85b62f987e9dc"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a3633131b026372cf19e85b62f987e9dc">SetH</a> (double <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:a5318efd1db3eea106377a5fc70bdaf14"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a5318efd1db3eea106377a5fc70bdaf14">SetLambdaUngapped</a> (double <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:af52a8100a377e23dc58becbcd0180740"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#af52a8100a377e23dc58becbcd0180740">SetKappaUngapped</a> (double <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:a3099acf7b7abba507dc9bc4e15b8ea34"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a3099acf7b7abba507dc9bc4e15b8ea34">SetHUngapped</a> (double <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="inherit_header pub_methods_classCPssm__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCPssm__Base')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCPssm__Base.html">CPssm_Base</a></td></tr>
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<tr class="memitem:ga82a170462249f6e72010292706c5507d inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga82a170462249f6e72010292706c5507d">CPssm_Base</a> (void)</td></tr>
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<tr class="memitem:gaec2f084a3c9f47b87c2d2d82c7b88ddc inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaec2f084a3c9f47b87c2d2d82c7b88ddc">~CPssm_Base</a> (void)</td></tr>
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<tr class="memitem:gadc22f8f0e56cf1d14b002569234235c4 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadc22f8f0e56cf1d14b002569234235c4">DECLARE_INTERNAL_TYPE_INFO</a> ()</td></tr>
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<tr class="memitem:gae1351ff7d1b1c515f2addc5974d142a0 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gae1351ff7d1b1c515f2addc5974d142a0">IsSetIsProtein</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gae1351ff7d1b1c515f2addc5974d142a0 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Is the this a protein or nucleotide scoring matrix? <a class="el" href="structCheck.html">Check</a> if a value has been assigned to IsProtein data member. <a href="group__dataspec__NCBI__ScoreMat.html#gae1351ff7d1b1c515f2addc5974d142a0">More...</a><br /></td></tr>
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<tr class="memitem:ga326d9e051b3a79e49ab0dc5d80667410 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga326d9e051b3a79e49ab0dc5d80667410">CanGetIsProtein</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga326d9e051b3a79e49ab0dc5d80667410 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetIsProtein method. <a href="group__dataspec__NCBI__ScoreMat.html#ga326d9e051b3a79e49ab0dc5d80667410">More...</a><br /></td></tr>
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<tr class="memitem:ga2adfbbf53d20d6772b7ed2b1cdeaa639 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga2adfbbf53d20d6772b7ed2b1cdeaa639">ResetIsProtein</a> (void)</td></tr>
|
||
<tr class="memdesc:ga2adfbbf53d20d6772b7ed2b1cdeaa639 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset IsProtein data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga2adfbbf53d20d6772b7ed2b1cdeaa639">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2adfbbf53d20d6772b7ed2b1cdeaa639 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga820615acb00a63e1683082f458fb1184 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga820615acb00a63e1683082f458fb1184">SetDefaultIsProtein</a> (void)</td></tr>
|
||
<tr class="memdesc:ga820615acb00a63e1683082f458fb1184 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign default value to IsProtein data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga820615acb00a63e1683082f458fb1184">More...</a><br /></td></tr>
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||
<tr class="separator:ga820615acb00a63e1683082f458fb1184 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga3f03a8e302ae6c4db1778cfa52c802af inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab37043172f097a960d296d83ad7e7396">TIsProtein</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga3f03a8e302ae6c4db1778cfa52c802af">GetIsProtein</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga3f03a8e302ae6c4db1778cfa52c802af inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the IsProtein member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga3f03a8e302ae6c4db1778cfa52c802af">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3f03a8e302ae6c4db1778cfa52c802af inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga3d0e161dbd3eae94c1f2368f957fdcbb inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga3d0e161dbd3eae94c1f2368f957fdcbb">SetIsProtein</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab37043172f097a960d296d83ad7e7396">TIsProtein</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga3d0e161dbd3eae94c1f2368f957fdcbb inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to IsProtein data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga3d0e161dbd3eae94c1f2368f957fdcbb">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3d0e161dbd3eae94c1f2368f957fdcbb inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga0864e0d5eaa7e2287efd5ae0bc132999 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab37043172f097a960d296d83ad7e7396">TIsProtein</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga0864e0d5eaa7e2287efd5ae0bc132999">SetIsProtein</a> (void)</td></tr>
|
||
<tr class="memdesc:ga0864e0d5eaa7e2287efd5ae0bc132999 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to IsProtein data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga0864e0d5eaa7e2287efd5ae0bc132999">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0864e0d5eaa7e2287efd5ae0bc132999 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gad86561cf1b12d595e549a52519ab0460 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad86561cf1b12d595e549a52519ab0460">IsSetIdentifier</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gad86561cf1b12d595e549a52519ab0460 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">PSSM identifier <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Identifier data member. <a href="group__dataspec__NCBI__ScoreMat.html#gad86561cf1b12d595e549a52519ab0460">More...</a><br /></td></tr>
|
||
<tr class="separator:gad86561cf1b12d595e549a52519ab0460 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gafd8e9c72fcbf2bda6ca9dea5b53c718b inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gafd8e9c72fcbf2bda6ca9dea5b53c718b">CanGetIdentifier</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gafd8e9c72fcbf2bda6ca9dea5b53c718b inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetIdentifier method. <a href="group__dataspec__NCBI__ScoreMat.html#gafd8e9c72fcbf2bda6ca9dea5b53c718b">More...</a><br /></td></tr>
|
||
<tr class="separator:gafd8e9c72fcbf2bda6ca9dea5b53c718b inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9d5da03d7437e35cfe826e0c17664c33 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga9d5da03d7437e35cfe826e0c17664c33">ResetIdentifier</a> (void)</td></tr>
|
||
<tr class="memdesc:ga9d5da03d7437e35cfe826e0c17664c33 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Identifier data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga9d5da03d7437e35cfe826e0c17664c33">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9d5da03d7437e35cfe826e0c17664c33 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga012a3eec4022f3010a2d0ea5703e3b78 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab057bdb09a266f0b2adfc064c24cdf36">TIdentifier</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga012a3eec4022f3010a2d0ea5703e3b78">GetIdentifier</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga012a3eec4022f3010a2d0ea5703e3b78 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Identifier member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga012a3eec4022f3010a2d0ea5703e3b78">More...</a><br /></td></tr>
|
||
<tr class="separator:ga012a3eec4022f3010a2d0ea5703e3b78 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga1e95533eba0f89ab4c6cba773508e115 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga1e95533eba0f89ab4c6cba773508e115">SetIdentifier</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab057bdb09a266f0b2adfc064c24cdf36">TIdentifier</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga1e95533eba0f89ab4c6cba773508e115 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Identifier data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga1e95533eba0f89ab4c6cba773508e115">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1e95533eba0f89ab4c6cba773508e115 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga96156c793524221a47d40d10a9e7c867 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab057bdb09a266f0b2adfc064c24cdf36">TIdentifier</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga96156c793524221a47d40d10a9e7c867">SetIdentifier</a> (void)</td></tr>
|
||
<tr class="memdesc:ga96156c793524221a47d40d10a9e7c867 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Identifier data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga96156c793524221a47d40d10a9e7c867">More...</a><br /></td></tr>
|
||
<tr class="separator:ga96156c793524221a47d40d10a9e7c867 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga8c29dce4ea4b95d920bb0f9358ec6477 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga8c29dce4ea4b95d920bb0f9358ec6477">IsSetNumRows</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga8c29dce4ea4b95d920bb0f9358ec6477 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">The dimensions of the matrix are returned so the client can verify that all data was received. <a href="group__dataspec__NCBI__ScoreMat.html#ga8c29dce4ea4b95d920bb0f9358ec6477">More...</a><br /></td></tr>
|
||
<tr class="separator:ga8c29dce4ea4b95d920bb0f9358ec6477 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaaea66c0ae52592f89a3d43de4b346316 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaaea66c0ae52592f89a3d43de4b346316">CanGetNumRows</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gaaea66c0ae52592f89a3d43de4b346316 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetNumRows method. <a href="group__dataspec__NCBI__ScoreMat.html#gaaea66c0ae52592f89a3d43de4b346316">More...</a><br /></td></tr>
|
||
<tr class="separator:gaaea66c0ae52592f89a3d43de4b346316 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5288c56c185b74fe6717d0240d12b14e inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga5288c56c185b74fe6717d0240d12b14e">ResetNumRows</a> (void)</td></tr>
|
||
<tr class="memdesc:ga5288c56c185b74fe6717d0240d12b14e inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset NumRows data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga5288c56c185b74fe6717d0240d12b14e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5288c56c185b74fe6717d0240d12b14e inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga0dbc9b0129ca342c46c5564f9b41c4f6 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga865914179e0c5e5ec7e56a452c9daafb">TNumRows</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga0dbc9b0129ca342c46c5564f9b41c4f6">GetNumRows</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga0dbc9b0129ca342c46c5564f9b41c4f6 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the NumRows member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga0dbc9b0129ca342c46c5564f9b41c4f6">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0dbc9b0129ca342c46c5564f9b41c4f6 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gadf340678f9e04f1d3328245cb7ef863e inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadf340678f9e04f1d3328245cb7ef863e">SetNumRows</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga865914179e0c5e5ec7e56a452c9daafb">TNumRows</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:gadf340678f9e04f1d3328245cb7ef863e inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to NumRows data member. <a href="group__dataspec__NCBI__ScoreMat.html#gadf340678f9e04f1d3328245cb7ef863e">More...</a><br /></td></tr>
|
||
<tr class="separator:gadf340678f9e04f1d3328245cb7ef863e inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga1bf5cd2d55daf78e41d7f0c2a6ef71c0 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga865914179e0c5e5ec7e56a452c9daafb">TNumRows</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga1bf5cd2d55daf78e41d7f0c2a6ef71c0">SetNumRows</a> (void)</td></tr>
|
||
<tr class="memdesc:ga1bf5cd2d55daf78e41d7f0c2a6ef71c0 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to NumRows data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga1bf5cd2d55daf78e41d7f0c2a6ef71c0">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1bf5cd2d55daf78e41d7f0c2a6ef71c0 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaa94db6115332eca7ef467eb71deed789 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaa94db6115332eca7ef467eb71deed789">IsSetNumColumns</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gaa94db6115332eca7ef467eb71deed789 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">number of columns <a class="el" href="structCheck.html">Check</a> if a value has been assigned to NumColumns data member. <a href="group__dataspec__NCBI__ScoreMat.html#gaa94db6115332eca7ef467eb71deed789">More...</a><br /></td></tr>
|
||
<tr class="separator:gaa94db6115332eca7ef467eb71deed789 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5e7ddbd02e1154c98760a42e2de78c12 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga5e7ddbd02e1154c98760a42e2de78c12">CanGetNumColumns</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5e7ddbd02e1154c98760a42e2de78c12 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetNumColumns method. <a href="group__dataspec__NCBI__ScoreMat.html#ga5e7ddbd02e1154c98760a42e2de78c12">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5e7ddbd02e1154c98760a42e2de78c12 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaf58da093b65217c64c6cf0c3a61567c8 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaf58da093b65217c64c6cf0c3a61567c8">ResetNumColumns</a> (void)</td></tr>
|
||
<tr class="memdesc:gaf58da093b65217c64c6cf0c3a61567c8 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset NumColumns data member. <a href="group__dataspec__NCBI__ScoreMat.html#gaf58da093b65217c64c6cf0c3a61567c8">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf58da093b65217c64c6cf0c3a61567c8 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7ab6cf1b35928c48aeeca12172b1acc2 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga9d18922550597604055ec54ed9a12094">TNumColumns</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga7ab6cf1b35928c48aeeca12172b1acc2">GetNumColumns</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7ab6cf1b35928c48aeeca12172b1acc2 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the NumColumns member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga7ab6cf1b35928c48aeeca12172b1acc2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7ab6cf1b35928c48aeeca12172b1acc2 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gad3b097ccdd3a28f62432a394eaf03ee2 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad3b097ccdd3a28f62432a394eaf03ee2">SetNumColumns</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga9d18922550597604055ec54ed9a12094">TNumColumns</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:gad3b097ccdd3a28f62432a394eaf03ee2 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to NumColumns data member. <a href="group__dataspec__NCBI__ScoreMat.html#gad3b097ccdd3a28f62432a394eaf03ee2">More...</a><br /></td></tr>
|
||
<tr class="separator:gad3b097ccdd3a28f62432a394eaf03ee2 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga38bf6748cce3743e273f38e0e711ccd7 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga9d18922550597604055ec54ed9a12094">TNumColumns</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga38bf6748cce3743e273f38e0e711ccd7">SetNumColumns</a> (void)</td></tr>
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<tr class="memdesc:ga38bf6748cce3743e273f38e0e711ccd7 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to NumColumns data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga38bf6748cce3743e273f38e0e711ccd7">More...</a><br /></td></tr>
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||
<tr class="separator:ga38bf6748cce3743e273f38e0e711ccd7 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga8455282256a8464bd5f092d7b8598dd4 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga8455282256a8464bd5f092d7b8598dd4">IsSetRowLabels</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga8455282256a8464bd5f092d7b8598dd4 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">row-labels is given to note the order of residue types so that it can be cross-checked between applications. <a href="group__dataspec__NCBI__ScoreMat.html#ga8455282256a8464bd5f092d7b8598dd4">More...</a><br /></td></tr>
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||
<tr class="separator:ga8455282256a8464bd5f092d7b8598dd4 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga66d60d92a6989a01749236cc16724538 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga66d60d92a6989a01749236cc16724538">CanGetRowLabels</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga66d60d92a6989a01749236cc16724538 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetRowLabels method. <a href="group__dataspec__NCBI__ScoreMat.html#ga66d60d92a6989a01749236cc16724538">More...</a><br /></td></tr>
|
||
<tr class="separator:ga66d60d92a6989a01749236cc16724538 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaebb80d201c6f699da2f2bbdb26c27c88 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaebb80d201c6f699da2f2bbdb26c27c88">ResetRowLabels</a> (void)</td></tr>
|
||
<tr class="memdesc:gaebb80d201c6f699da2f2bbdb26c27c88 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset RowLabels data member. <a href="group__dataspec__NCBI__ScoreMat.html#gaebb80d201c6f699da2f2bbdb26c27c88">More...</a><br /></td></tr>
|
||
<tr class="separator:gaebb80d201c6f699da2f2bbdb26c27c88 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6884e06dfbefa6d9133fcae6124d569b inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga90c5bd2cafe81d6a42bb54eddf3a2123">TRowLabels</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga6884e06dfbefa6d9133fcae6124d569b">GetRowLabels</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga6884e06dfbefa6d9133fcae6124d569b inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the RowLabels member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga6884e06dfbefa6d9133fcae6124d569b">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6884e06dfbefa6d9133fcae6124d569b inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga1ccae7e8a788f245191e72231873585b inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga90c5bd2cafe81d6a42bb54eddf3a2123">TRowLabels</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga1ccae7e8a788f245191e72231873585b">SetRowLabels</a> (void)</td></tr>
|
||
<tr class="memdesc:ga1ccae7e8a788f245191e72231873585b inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to RowLabels data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga1ccae7e8a788f245191e72231873585b">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1ccae7e8a788f245191e72231873585b inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae833b68e58bbefcc627862c420311238 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gae833b68e58bbefcc627862c420311238">IsSetByRow</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gae833b68e58bbefcc627862c420311238 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">are matrices stored row by row? <a class="el" href="structCheck.html">Check</a> if a value has been assigned to ByRow data member. <a href="group__dataspec__NCBI__ScoreMat.html#gae833b68e58bbefcc627862c420311238">More...</a><br /></td></tr>
|
||
<tr class="separator:gae833b68e58bbefcc627862c420311238 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga1b63de33becc52bbff5291b8710ab922 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga1b63de33becc52bbff5291b8710ab922">CanGetByRow</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga1b63de33becc52bbff5291b8710ab922 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetByRow method. <a href="group__dataspec__NCBI__ScoreMat.html#ga1b63de33becc52bbff5291b8710ab922">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1b63de33becc52bbff5291b8710ab922 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga91199a3b9a08199437dfe65b77dccd8c inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga91199a3b9a08199437dfe65b77dccd8c">ResetByRow</a> (void)</td></tr>
|
||
<tr class="memdesc:ga91199a3b9a08199437dfe65b77dccd8c inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset ByRow data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga91199a3b9a08199437dfe65b77dccd8c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga91199a3b9a08199437dfe65b77dccd8c inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7a1e1419dd04d0766c82617b5e07f520 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga7a1e1419dd04d0766c82617b5e07f520">SetDefaultByRow</a> (void)</td></tr>
|
||
<tr class="memdesc:ga7a1e1419dd04d0766c82617b5e07f520 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign default value to ByRow data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga7a1e1419dd04d0766c82617b5e07f520">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7a1e1419dd04d0766c82617b5e07f520 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gabd29ffbcb45e73ad2a995bd6aaf67f10 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gae3930bf3932dbf6f2a5064f2c5214756">TByRow</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gabd29ffbcb45e73ad2a995bd6aaf67f10">GetByRow</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gabd29ffbcb45e73ad2a995bd6aaf67f10 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the ByRow member data. <a href="group__dataspec__NCBI__ScoreMat.html#gabd29ffbcb45e73ad2a995bd6aaf67f10">More...</a><br /></td></tr>
|
||
<tr class="separator:gabd29ffbcb45e73ad2a995bd6aaf67f10 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga494bff9dc8d8a65825d870672bd6dc38 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga494bff9dc8d8a65825d870672bd6dc38">SetByRow</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#gae3930bf3932dbf6f2a5064f2c5214756">TByRow</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga494bff9dc8d8a65825d870672bd6dc38 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to ByRow data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga494bff9dc8d8a65825d870672bd6dc38">More...</a><br /></td></tr>
|
||
<tr class="separator:ga494bff9dc8d8a65825d870672bd6dc38 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga4eb7c91b0664161e0563fc7b4556fa54 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gae3930bf3932dbf6f2a5064f2c5214756">TByRow</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga4eb7c91b0664161e0563fc7b4556fa54">SetByRow</a> (void)</td></tr>
|
||
<tr class="memdesc:ga4eb7c91b0664161e0563fc7b4556fa54 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to ByRow data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga4eb7c91b0664161e0563fc7b4556fa54">More...</a><br /></td></tr>
|
||
<tr class="separator:ga4eb7c91b0664161e0563fc7b4556fa54 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga93d8a2bccad169b30afe7aa0eab00f33 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga93d8a2bccad169b30afe7aa0eab00f33">IsSetQuery</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga93d8a2bccad169b30afe7aa0eab00f33 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">PSSM representative sequence (master) <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Query data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga93d8a2bccad169b30afe7aa0eab00f33">More...</a><br /></td></tr>
|
||
<tr class="separator:ga93d8a2bccad169b30afe7aa0eab00f33 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9d6e6000934e76e33d23d850f6212498 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga9d6e6000934e76e33d23d850f6212498">CanGetQuery</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga9d6e6000934e76e33d23d850f6212498 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetQuery method. <a href="group__dataspec__NCBI__ScoreMat.html#ga9d6e6000934e76e33d23d850f6212498">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9d6e6000934e76e33d23d850f6212498 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga778568c1c14ce72070c1067b7a264391 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga778568c1c14ce72070c1067b7a264391">ResetQuery</a> (void)</td></tr>
|
||
<tr class="memdesc:ga778568c1c14ce72070c1067b7a264391 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Query data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga778568c1c14ce72070c1067b7a264391">More...</a><br /></td></tr>
|
||
<tr class="separator:ga778568c1c14ce72070c1067b7a264391 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga06acea6716e055aae509acde4ed20237 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad9b5f57caa935322e65678a1a34351b7">TQuery</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga06acea6716e055aae509acde4ed20237">GetQuery</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga06acea6716e055aae509acde4ed20237 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Query member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga06acea6716e055aae509acde4ed20237">More...</a><br /></td></tr>
|
||
<tr class="separator:ga06acea6716e055aae509acde4ed20237 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga37982b2140c03966202a013a15861b83 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga37982b2140c03966202a013a15861b83">SetQuery</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad9b5f57caa935322e65678a1a34351b7">TQuery</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga37982b2140c03966202a013a15861b83 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Query data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga37982b2140c03966202a013a15861b83">More...</a><br /></td></tr>
|
||
<tr class="separator:ga37982b2140c03966202a013a15861b83 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7633e6061e69cfc98f5050d9df14065b inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad9b5f57caa935322e65678a1a34351b7">TQuery</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga7633e6061e69cfc98f5050d9df14065b">SetQuery</a> (void)</td></tr>
|
||
<tr class="memdesc:ga7633e6061e69cfc98f5050d9df14065b inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Query data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga7633e6061e69cfc98f5050d9df14065b">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7633e6061e69cfc98f5050d9df14065b inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga6b11c1110c117c9e5d3212d2eafd7e57 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga6b11c1110c117c9e5d3212d2eafd7e57">IsSetIntermediateData</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga6b11c1110c117c9e5d3212d2eafd7e57 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">both intermediateData and finalData can be provided, but at least one of them must be provided. <a href="group__dataspec__NCBI__ScoreMat.html#ga6b11c1110c117c9e5d3212d2eafd7e57">More...</a><br /></td></tr>
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||
<tr class="separator:ga6b11c1110c117c9e5d3212d2eafd7e57 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6e81ccf887e9ac86694c7710cafde813 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga6e81ccf887e9ac86694c7710cafde813">CanGetIntermediateData</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga6e81ccf887e9ac86694c7710cafde813 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetIntermediateData method. <a href="group__dataspec__NCBI__ScoreMat.html#ga6e81ccf887e9ac86694c7710cafde813">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6e81ccf887e9ac86694c7710cafde813 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaa0316dbb9a238cad0bccf571d208ff88 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaa0316dbb9a238cad0bccf571d208ff88">ResetIntermediateData</a> (void)</td></tr>
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||
<tr class="memdesc:gaa0316dbb9a238cad0bccf571d208ff88 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset IntermediateData data member. <a href="group__dataspec__NCBI__ScoreMat.html#gaa0316dbb9a238cad0bccf571d208ff88">More...</a><br /></td></tr>
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||
<tr class="separator:gaa0316dbb9a238cad0bccf571d208ff88 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab2f83d27bfed7a7f5b3f1e546a035214 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga38c88095c15d57e002dab8f6f2ea1caf">TIntermediateData</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab2f83d27bfed7a7f5b3f1e546a035214">GetIntermediateData</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gab2f83d27bfed7a7f5b3f1e546a035214 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the IntermediateData member data. <a href="group__dataspec__NCBI__ScoreMat.html#gab2f83d27bfed7a7f5b3f1e546a035214">More...</a><br /></td></tr>
|
||
<tr class="separator:gab2f83d27bfed7a7f5b3f1e546a035214 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga794e3272887342f38d93f617f1b4fab6 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga794e3272887342f38d93f617f1b4fab6">SetIntermediateData</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga38c88095c15d57e002dab8f6f2ea1caf">TIntermediateData</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga794e3272887342f38d93f617f1b4fab6 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to IntermediateData data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga794e3272887342f38d93f617f1b4fab6">More...</a><br /></td></tr>
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||
<tr class="separator:ga794e3272887342f38d93f617f1b4fab6 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga51b4276ff71820e18bf660102f6b86ed inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga38c88095c15d57e002dab8f6f2ea1caf">TIntermediateData</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga51b4276ff71820e18bf660102f6b86ed">SetIntermediateData</a> (void)</td></tr>
|
||
<tr class="memdesc:ga51b4276ff71820e18bf660102f6b86ed inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to IntermediateData data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga51b4276ff71820e18bf660102f6b86ed">More...</a><br /></td></tr>
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||
<tr class="separator:ga51b4276ff71820e18bf660102f6b86ed inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0f6203dac190da4175a594aa4e04e8dd inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga0f6203dac190da4175a594aa4e04e8dd">IsSetFinalData</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga0f6203dac190da4175a594aa4e04e8dd inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Final representation for the PSSM <a class="el" href="structCheck.html">Check</a> if a value has been assigned to FinalData data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga0f6203dac190da4175a594aa4e04e8dd">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0f6203dac190da4175a594aa4e04e8dd inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga70a8425a7cdc4c2c99f31754e39d9a24 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga70a8425a7cdc4c2c99f31754e39d9a24">CanGetFinalData</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga70a8425a7cdc4c2c99f31754e39d9a24 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetFinalData method. <a href="group__dataspec__NCBI__ScoreMat.html#ga70a8425a7cdc4c2c99f31754e39d9a24">More...</a><br /></td></tr>
|
||
<tr class="separator:ga70a8425a7cdc4c2c99f31754e39d9a24 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gadc0d0b31708b841d4f418e6531d76496 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadc0d0b31708b841d4f418e6531d76496">ResetFinalData</a> (void)</td></tr>
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||
<tr class="memdesc:gadc0d0b31708b841d4f418e6531d76496 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset FinalData data member. <a href="group__dataspec__NCBI__ScoreMat.html#gadc0d0b31708b841d4f418e6531d76496">More...</a><br /></td></tr>
|
||
<tr class="separator:gadc0d0b31708b841d4f418e6531d76496 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6fc6d0227f46a5910750658faf8a1a41 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadf0e20cc1feb8c20493fcc72d0765966">TFinalData</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga6fc6d0227f46a5910750658faf8a1a41">GetFinalData</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga6fc6d0227f46a5910750658faf8a1a41 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the FinalData member data. <a href="group__dataspec__NCBI__ScoreMat.html#ga6fc6d0227f46a5910750658faf8a1a41">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6fc6d0227f46a5910750658faf8a1a41 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga8f134fd1cbddcb6b754d713c3d15d407 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga8f134fd1cbddcb6b754d713c3d15d407">SetFinalData</a> (<a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadf0e20cc1feb8c20493fcc72d0765966">TFinalData</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga8f134fd1cbddcb6b754d713c3d15d407 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to FinalData data member. <a href="group__dataspec__NCBI__ScoreMat.html#ga8f134fd1cbddcb6b754d713c3d15d407">More...</a><br /></td></tr>
|
||
<tr class="separator:ga8f134fd1cbddcb6b754d713c3d15d407 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad903930fc97539e43cb37b8ca3e12022 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadf0e20cc1feb8c20493fcc72d0765966">TFinalData</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad903930fc97539e43cb37b8ca3e12022">SetFinalData</a> (void)</td></tr>
|
||
<tr class="memdesc:gad903930fc97539e43cb37b8ca3e12022 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to FinalData data member. <a href="group__dataspec__NCBI__ScoreMat.html#gad903930fc97539e43cb37b8ca3e12022">More...</a><br /></td></tr>
|
||
<tr class="separator:gad903930fc97539e43cb37b8ca3e12022 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gadcc79ce84ac47061fefbe202687e9f01 inherit pub_methods_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadcc79ce84ac47061fefbe202687e9f01">Reset</a> (void)</td></tr>
|
||
<tr class="memdesc:gadcc79ce84ac47061fefbe202687e9f01 inherit pub_methods_classCPssm__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset the whole object. <a href="group__dataspec__NCBI__ScoreMat.html#gadcc79ce84ac47061fefbe202687e9f01">More...</a><br /></td></tr>
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||
<tr class="separator:gadcc79ce84ac47061fefbe202687e9f01 inherit pub_methods_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
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<tr class="memitem:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga8575b1015c4a4f3336b6e1c0a4324b71">CSerialObject</a> (void)</td></tr>
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||
<tr class="separator:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gaf278b96157abad20b5d944fb83d32fb1">~CSerialObject</a> (void)</td></tr>
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<tr class="separator:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCTypeInfo.html">CTypeInfo</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacb5d8a2e6878e58aeaeaf342081f0b7f">GetThisTypeInfo</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> =0</td></tr>
|
||
<tr class="separator:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">Assign</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &source, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>)</td></tr>
|
||
<tr class="memdesc:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Set object to copy of another one. <a href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">More...</a><br /></td></tr>
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||
<tr class="separator:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">Equals</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &object, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if both objects contain the same values. <a href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">More...</a><br /></td></tr>
|
||
<tr class="separator:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">DebugDump</a> (<a class="el" href="classCDebugDumpContext.html">CDebugDumpContext</a> ddc, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method for dumping debug information. <a href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">More...</a><br /></td></tr>
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||
<tr class="separator:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga7382b4cd30306d9444f85abd912ff61e">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab5506012856f3627d88368a24e1eb254">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char *<a class="el" href="dbapi__sample__base_8hpp.html#a8334353b550f5c3b6d2ea57d716ab2e2">file_name</a>, <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> file_line) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="separator:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">HasNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object data type has namespace name. <a href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">GetNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace name. <a href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">More...</a><br /></td></tr>
|
||
<tr class="separator:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">HasNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if data type has namespace prefix. <a href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">More...</a><br /></td></tr>
|
||
<tr class="separator:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">GetNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace prefix. <a href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">More...</a><br /></td></tr>
|
||
<tr class="separator:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">More...</a><br /></td></tr>
|
||
<tr class="separator:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">CObject</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src)</td></tr>
|
||
<tr class="memdesc:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">More...</a><br /></td></tr>
|
||
<tr class="separator:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">~CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCObject.html">CObject</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src) <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">More...</a><br /></td></tr>
|
||
<tr class="separator:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">CanBeDeleted</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object can be deleted. <a href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">More...</a><br /></td></tr>
|
||
<tr class="separator:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">IsAllocatedInPool</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is allocated in memory pool (not system heap) <a href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">Referenced</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced. <a href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">ReferencedOnlyOnce</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced only once. <a href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">More...</a><br /></td></tr>
|
||
<tr class="separator:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">AddReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Add reference to object. <a href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">RemoveReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference to object. <a href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">More...</a><br /></td></tr>
|
||
<tr class="separator:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">ReleaseReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference without deleting object. <a href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">DoNotDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as not allocated in heap – do not delete this object. <a href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">More...</a><br /></td></tr>
|
||
<tr class="separator:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">DoDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as allocated in heap – object can be deleted. <a href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator for memory allocation. <a href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">operator new[]</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new[] operator for 'array' memory allocation. <a href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">More...</a><br /></td></tr>
|
||
<tr class="separator:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">operator delete</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator for memory deallocation. <a href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">More...</a><br /></td></tr>
|
||
<tr class="separator:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">operator delete[]</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete[] operator for memory deallocation. <a href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, void *place)</td></tr>
|
||
<tr class="memdesc:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator. <a href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">operator delete</a> (void *ptr, void *place)</td></tr>
|
||
<tr class="memdesc:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">More...</a><br /></td></tr>
|
||
<tr class="separator:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator using memory pool. <a href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">operator delete</a> (void *ptr, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
|
||
<tr class="memitem:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ae8723856215191ef748f19ff73e8ba4e">CDebugDumpable</a> (void)</td></tr>
|
||
<tr class="separator:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#acdeaaedfabb4cc4a64108dbb854f4b51">~CDebugDumpable</a> (void)</td></tr>
|
||
<tr class="separator:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a4ff9ec248a38f17b7d8deb3f78318a37">DebugDumpText</a> (ostream &<a class="el" href="events__unit__test_8cpp.html#ac3c18c078fe416626b6c1dcc3e780245">out</a>, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#aa0101dfdc0ae0cbd0cb1609c96f96229">DebugDumpFormat</a> (<a class="el" href="classCDebugDumpFormatter.html">CDebugDumpFormatter</a> &ddf, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a19047c92521e5f3ad2a14bab26a49b51">DumpToConsole</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-static-attribs"></a>
|
||
Static Public Attributes</h2></td></tr>
|
||
<tr class="memitem:a7be806b63490460c7a07550472f71e4e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> double </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#a7be806b63490460c7a07550472f71e4e">kInvalidStat</a> = 0.0</td></tr>
|
||
<tr class="separator:a7be806b63490460c7a07550472f71e4e"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_attribs_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacf732f6a9f64037d0cad32a72f7522ea">ms_UnassignedStr</a> = "<*unassigned*>"</td></tr>
|
||
<tr class="separator:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6baaf827f8d2e4f98be84d91d511a716">ms_UnassignedByte</a> = char(0xcd)</td></tr>
|
||
<tr class="separator:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_attribs_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">eCounterBitsCanBeDeleted</a> = 1 << 0</td></tr>
|
||
<tr class="memdesc:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define possible object states. <a href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">eCounterBitsInPlainHeap</a> = 1 << 1</td></tr>
|
||
<tr class="memdesc:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Heap signature was found. <a href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">More...</a><br /></td></tr>
|
||
<tr class="separator:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">eCounterBitsPlaceMask</a></td></tr>
|
||
<tr class="memdesc:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mask for 'in heap' state flags. <a href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">More...</a><br /></td></tr>
|
||
<tr class="separator:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">eCounterStep</a> = 1 << 2</td></tr>
|
||
<tr class="memdesc:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Skip over the "in heap" bits. <a href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">eCounterValid</a> = <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>(1) << (sizeof(<a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>) * 8 - 2)</td></tr>
|
||
<tr class="memdesc:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Minimal value for valid objects (reference counter is zero) Must be a single bit value. <a href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">More...</a><br /></td></tr>
|
||
<tr class="separator:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">eCounterStateMask</a></td></tr>
|
||
<tr class="memdesc:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Valid object, and object in heap. <a href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">More...</a><br /></td></tr>
|
||
<tr class="separator:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-types"></a>
|
||
Private Types</h2></td></tr>
|
||
<tr class="memitem:aac08d17e3c32bc3d74204b6325953289"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCPssm__Base.html">CPssm_Base</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#aac08d17e3c32bc3d74204b6325953289">Tparent</a></td></tr>
|
||
<tr class="separator:aac08d17e3c32bc3d74204b6325953289"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
|
||
Private Member Functions</h2></td></tr>
|
||
<tr class="memitem:ab59d687953f8d9b97f94c686470a9ab8"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#ab59d687953f8d9b97f94c686470a9ab8">CPssm</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCPssm.html">CPssm</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:ab59d687953f8d9b97f94c686470a9ab8"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ab104a83ef6732d70e8f60ca7196655bf"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCPssm.html">CPssm</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCPssm.html#ab104a83ef6732d70e8f60ca7196655bf">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCPssm.html">CPssm</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:ab104a83ef6732d70e8f60ca7196655bf"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
|
||
Additional Inherited Members</h2></td></tr>
|
||
<tr class="inherit_header pub_types_classCPssm__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCPssm__Base')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCPssm__Base.html">CPssm_Base</a></td></tr>
|
||
<tr class="memitem:gab7a3b7c40e0ab2b85027e7d356c9afdc inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">enum class  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab7a3b7c40e0ab2b85027e7d356c9afdc">E_memberIndex</a> { <br />
|
||
  <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdcad2c4d82f7037e318e1aa6f58d06bd153">e__allMandatory</a> = 0
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdca58bc1b164e345898177768f8ec75f9e1">e_isProtein</a>
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdca5bf20ef05bb7e7f01459bd1ecb654799">e_identifier</a>
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdca41e15ba75cf255ca03aac4d640662246">e_numRows</a>
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdcae38a0c147852137cbc42108efdb3e25f">e_numColumns</a>
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdca877e156ff58fe05063484e163a302c0a">e_rowLabels</a>
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdcafec84227249199eab0141ceb0f214f27">e_byRow</a>
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdca85298f98c6f6512d0a1a145459eab0ca">e_query</a>
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdca9f18aaaf44239e2bdc6bc017980779ab">e_intermediateData</a>
|
||
, <a class="el" href="group__dataspec__NCBI__ScoreMat.html#ggab7a3b7c40e0ab2b85027e7d356c9afdcacf05da07fbcf7712aa1925eaf470787e">e_finalData</a>
|
||
<br />
|
||
}</td></tr>
|
||
<tr class="separator:gab7a3b7c40e0ab2b85027e7d356c9afdc inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab37043172f097a960d296d83ad7e7396 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab37043172f097a960d296d83ad7e7396">TIsProtein</a></td></tr>
|
||
<tr class="separator:gab37043172f097a960d296d83ad7e7396 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab057bdb09a266f0b2adfc064c24cdf36 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCObject__id.html">CObject_id</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab057bdb09a266f0b2adfc064c24cdf36">TIdentifier</a></td></tr>
|
||
<tr class="separator:gab057bdb09a266f0b2adfc064c24cdf36 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga865914179e0c5e5ec7e56a452c9daafb inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga865914179e0c5e5ec7e56a452c9daafb">TNumRows</a></td></tr>
|
||
<tr class="separator:ga865914179e0c5e5ec7e56a452c9daafb inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9d18922550597604055ec54ed9a12094 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga9d18922550597604055ec54ed9a12094">TNumColumns</a></td></tr>
|
||
<tr class="separator:ga9d18922550597604055ec54ed9a12094 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga90c5bd2cafe81d6a42bb54eddf3a2123 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef list< <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga90c5bd2cafe81d6a42bb54eddf3a2123">TRowLabels</a></td></tr>
|
||
<tr class="separator:ga90c5bd2cafe81d6a42bb54eddf3a2123 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae3930bf3932dbf6f2a5064f2c5214756 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gae3930bf3932dbf6f2a5064f2c5214756">TByRow</a></td></tr>
|
||
<tr class="separator:gae3930bf3932dbf6f2a5064f2c5214756 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gad9b5f57caa935322e65678a1a34351b7 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSeq__entry.html">CSeq_entry</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gad9b5f57caa935322e65678a1a34351b7">TQuery</a></td></tr>
|
||
<tr class="separator:gad9b5f57caa935322e65678a1a34351b7 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga38c88095c15d57e002dab8f6f2ea1caf inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCPssmIntermediateData.html">CPssmIntermediateData</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#ga38c88095c15d57e002dab8f6f2ea1caf">TIntermediateData</a></td></tr>
|
||
<tr class="separator:ga38c88095c15d57e002dab8f6f2ea1caf inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gadf0e20cc1feb8c20493fcc72d0765966 inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCPssmFinalData.html">CPssmFinalData</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gadf0e20cc1feb8c20493fcc72d0765966">TFinalData</a></td></tr>
|
||
<tr class="separator:gadf0e20cc1feb8c20493fcc72d0765966 inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaa40dc9110a189bbd6ed84e32f143abfe inherit pub_types_classCPssm__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSerialObject_1_1CMemberIndex.html">Tparent::CMemberIndex</a>< <a class="el" href="group__dataspec__NCBI__ScoreMat.html#gab7a3b7c40e0ab2b85027e7d356c9afdc">E_memberIndex</a>, 10 > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__ScoreMat.html#gaa40dc9110a189bbd6ed84e32f143abfe">TmemberIndex</a></td></tr>
|
||
<tr class="separator:gaa40dc9110a189bbd6ed84e32f143abfe inherit pub_types_classCPssm__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_types_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCObject')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> { <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca2b8c59f649cc88eeb7eaeba939e2838d">eAllocFillNone</a> = 1
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca336d7ff658b673c2e8fe3aed9b155f04">eAllocFillZero</a>
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588ccab3631bf1c36b77f950d94372290deb76">eAllocFillPattern</a>
|
||
}</td></tr>
|
||
<tr class="memdesc:ga3cf5f3ac0aef32c4aab1fa66513588cc"><td class="mdescLeft"> </td><td class="mdescRight">Control filling of newly allocated memory. <a href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCObjectCounterLocker.html">CObjectCounterLocker</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">TLockerType</a></td></tr>
|
||
<tr class="memdesc:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Default locker type for <a class="el" href="classCRef.html" title="CRef –.">CRef</a>. <a href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef atomic< <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">TCounter</a></td></tr>
|
||
<tr class="memdesc:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Counter type is CAtomiCounter. <a href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">More...</a><br /></td></tr>
|
||
<tr class="separator:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a></td></tr>
|
||
<tr class="memdesc:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Alias for value type of counter. <a href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab2a92c7a5b5900317294b85e854db07e">SetVerifyDataThread</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga2e3bead397d7ec0fffde866cd890267e">SetVerifyDataGlobal</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gada3dbb83951d0bed9bde06c6c4ede9e2">UnassignedString</a> (void)</td></tr>
|
||
<tr class="separator:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__STL.html#ga88e22aab83a29bae20f5354e89b041e3">CStringUTF8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga123d82fb69550b6418ad5d69e752873a">UnassignedStringUTF8</a> (void)</td></tr>
|
||
<tr class="separator:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga1d897c6ce0f541df2487600cedd9f40a">UnassignedByte</a> (void)</td></tr>
|
||
<tr class="separator:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">ThrowNullPointerException</a> (void)</td></tr>
|
||
<tr class="memdesc:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method to throw null pointer exception. <a href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">More...</a><br /></td></tr>
|
||
<tr class="separator:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae042a181e665dd40945c1c1a7a6bc5d1">ThrowNullPointerException</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> type_info &<a class="el" href="structtype.html">type</a>)</td></tr>
|
||
<tr class="separator:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga4b6f1beef2a1f37c68f7f3b1aac471d8">GetAllocFillMode</a> (void)</td></tr>
|
||
<tr class="separator:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga42eceef165a83cc081837a373ab6dd67">SetAllocFillMode</a> (<a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> <a class="el" href="mdb__load_8c.html#a1ea5d0cb93f22f7d0fdf804bd68c3326">mode</a>)</td></tr>
|
||
<tr class="separator:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">SetAllocFillMode</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Set mode from configuration parameter value. <a href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">More...</a><br /></td></tr>
|
||
<tr class="separator:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
|
||
<tr class="memitem:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ab6ba54280c562230f65733cca0560c83">EnableDebugDump</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> on)</td></tr>
|
||
<tr class="separator:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pro_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classCObject')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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||
<tr class="memitem:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">DeleteThis</a> (void)</td></tr>
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<tr class="memdesc:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Virtual method "deleting" this object. <a href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">More...</a><br /></td></tr>
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<tr class="separator:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
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<p class="definition">Definition at line <a class="el" href="Pssm_8hpp_source.html#l00054">54</a> of file <a class="el" href="Pssm_8hpp_source.html">Pssm.hpp</a>.</p>
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</div><h2 class="groupheader">Member Typedef Documentation</h2>
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<a id="aac08d17e3c32bc3d74204b6325953289"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#aac08d17e3c32bc3d74204b6325953289">◆ </a></span>Tparent</h2>
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<td class="memname">typedef <a class="el" href="classCPssm__Base.html">CPssm_Base</a> <a class="el" href="classCPssm.html#aac08d17e3c32bc3d74204b6325953289">CPssm::Tparent</a></td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8hpp_source.html#l00056">56</a> of file <a class="el" href="Pssm_8hpp_source.html">Pssm.hpp</a>.</p>
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<h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<a id="aec8b56075fd9a70575575415f91435a4"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#aec8b56075fd9a70575575415f91435a4">◆ </a></span>CPssm() <span class="overload">[1/2]</span></h2>
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<td class="memname">CPssm::CPssm </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<td></td>
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8hpp_source.html#l00097">97</a> of file <a class="el" href="Pssm_8hpp_source.html">Pssm.hpp</a>.</p>
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<a id="a621a814e786baddc04174800e37f6508"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a621a814e786baddc04174800e37f6508">◆ </a></span>~CPssm()</h2>
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||
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<td class="memname">CPssm::~CPssm </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00057">57</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ab59d687953f8d9b97f94c686470a9ab8">◆ </a></span>CPssm() <span class="overload">[2/2]</span></h2>
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<td class="memname">CPssm::CPssm </td>
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||
<td>(</td>
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||
<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCPssm.html">CPssm</a> & </td>
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||
<td class="paramname"><em>value</em></td><td>)</td>
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||
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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||
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<h2 class="groupheader">Member Function Documentation</h2>
|
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<a id="a189e012cdb36dffd2149cee3220db192"></a>
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||
<h2 class="memtitle"><span class="permalink"><a href="#a189e012cdb36dffd2149cee3220db192">◆ </a></span>GetH()</h2>
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||
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<td class="memname">double CPssm::GetH </td>
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||
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|
||
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||
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||
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00120">120</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
|
||
|
||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00808">CPssm_Base::CanGetFinalData()</a>, <a class="el" href="Pssm___8hpp_source.html#l00814">CPssm_Base::GetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00678">CPssmFinalData_Base::GetH()</a>, and <a class="el" href="Pssm_8hpp_source.html#l00071">kInvalidStat</a>.</p>
|
||
|
||
<p class="reference">Referenced by <a class="el" href="blast__app__util_8cpp_source.html#l00791">ExtractPssmAncillaryData()</a>.</p>
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||
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||
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||
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<a id="a85afde4bdc5764ddd4185f70e3f0112b"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a85afde4bdc5764ddd4185f70e3f0112b">◆ </a></span>GetHUngapped()</h2>
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<td class="memname">double CPssm::GetHUngapped </td>
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||
<td>(</td>
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||
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||
<td> const</td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00147">147</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
|
||
|
||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00808">CPssm_Base::CanGetFinalData()</a>, <a class="el" href="Pssm___8hpp_source.html#l00814">CPssm_Base::GetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00869">CPssmFinalData_Base::GetHUngapped()</a>, and <a class="el" href="Pssm_8hpp_source.html#l00071">kInvalidStat</a>.</p>
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||
|
||
<p class="reference">Referenced by <a class="el" href="blast__app__util_8cpp_source.html#l00791">ExtractPssmAncillaryData()</a>.</p>
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||
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||
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||
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||
<a id="a37e1c2a8e099398905c162821754c4a9"></a>
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||
<h2 class="memtitle"><span class="permalink"><a href="#a37e1c2a8e099398905c162821754c4a9">◆ </a></span>GetKappa()</h2>
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||
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||
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||
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||
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<td class="memname">double CPssm::GetKappa </td>
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||
<td>(</td>
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||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
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||
<td> const</td>
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||
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||
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00111">111</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
|
||
|
||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00808">CPssm_Base::CanGetFinalData()</a>, <a class="el" href="Pssm___8hpp_source.html#l00814">CPssm_Base::GetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00631">CPssmFinalData_Base::GetKappa()</a>, and <a class="el" href="Pssm_8hpp_source.html#l00071">kInvalidStat</a>.</p>
|
||
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||
<p class="reference">Referenced by <a class="el" href="blast__app__util_8cpp_source.html#l00791">ExtractPssmAncillaryData()</a>.</p>
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||
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||
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||
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||
<a id="a3af24759aa19792e5006c1ca30cce233"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a3af24759aa19792e5006c1ca30cce233">◆ </a></span>GetKappaUngapped()</h2>
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||
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||
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||
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||
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||
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||
<td class="memname">double CPssm::GetKappaUngapped </td>
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||
<td>(</td>
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||
<td class="paramname"></td><td>)</td>
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||
<td> const</td>
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||
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00138">138</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
|
||
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||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00808">CPssm_Base::CanGetFinalData()</a>, <a class="el" href="Pssm___8hpp_source.html#l00814">CPssm_Base::GetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00822">CPssmFinalData_Base::GetKappaUngapped()</a>, and <a class="el" href="Pssm_8hpp_source.html#l00071">kInvalidStat</a>.</p>
|
||
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||
<p class="reference">Referenced by <a class="el" href="blast__app__util_8cpp_source.html#l00791">ExtractPssmAncillaryData()</a>.</p>
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||
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<a id="aa80b051f75e71cfc428b0fb025be25e2"></a>
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||
<h2 class="memtitle"><span class="permalink"><a href="#aa80b051f75e71cfc428b0fb025be25e2">◆ </a></span>GetLambda()</h2>
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||
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||
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<td class="memname">double CPssm::GetLambda </td>
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||
<td>(</td>
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||
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|
||
<td class="paramname"></td><td>)</td>
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||
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||
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00102">102</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
|
||
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||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00808">CPssm_Base::CanGetFinalData()</a>, <a class="el" href="Pssm___8hpp_source.html#l00814">CPssm_Base::GetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00584">CPssmFinalData_Base::GetLambda()</a>, and <a class="el" href="Pssm_8hpp_source.html#l00071">kInvalidStat</a>.</p>
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||
<p class="reference">Referenced by <a class="el" href="blast__app__util_8cpp_source.html#l00791">ExtractPssmAncillaryData()</a>.</p>
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||
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<a id="a75a940fa8076e741306c7938151eae4d"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a75a940fa8076e741306c7938151eae4d">◆ </a></span>GetLambdaUngapped()</h2>
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<td class="memname">double CPssm::GetLambdaUngapped </td>
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||
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||
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00129">129</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00808">CPssm_Base::CanGetFinalData()</a>, <a class="el" href="Pssm___8hpp_source.html#l00814">CPssm_Base::GetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00775">CPssmFinalData_Base::GetLambdaUngapped()</a>, and <a class="el" href="Pssm_8hpp_source.html#l00071">kInvalidStat</a>.</p>
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||
<p class="reference">Referenced by <a class="el" href="blast__app__util_8cpp_source.html#l00791">ExtractPssmAncillaryData()</a>.</p>
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<a id="ada0fdcb55d4415849977a0e605d864ba"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ada0fdcb55d4415849977a0e605d864ba">◆ </a></span>GetQueryLength()</h2>
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<td class="memname"><a class="el" href="group__String.html#ga092e2fa4042726a7b28289e3fadea5f7">SIZE_TYPE</a> CPssm::GetQueryLength </td>
|
||
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|
||
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|
||
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||
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||
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<p>Return the query length or 0 if no query is available. </p>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00062">62</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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||
<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00766">CPssm_Base::CanGetQuery()</a>, <a class="el" href="Bioseq___8hpp_source.html#l00336">CBioseq_Base::GetInst()</a>, <a class="el" href="Seq__inst___8hpp_source.html#l00659">CSeq_inst_Base::GetLength()</a>, <a class="el" href="Pssm___8hpp_source.html#l00772">CPssm_Base::GetQuery()</a>, and <a class="el" href="Seq__entry___8cpp_source.html#l00102">CSeq_entry_Base::GetSeq()</a>.</p>
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||
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||
<p class="reference">Referenced by <a class="el" href="search__strategy__unit__test_8cpp_source.html#l00191">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="Pssm_8cpp_source.html#l00077">GetQuerySequenceData()</a>, <a class="el" href="makeprofiledb_8cpp_source.html#l00605">CMakeProfileDBApp::x_CheckInputScoremat()</a>, <a class="el" href="makeprofiledb_8cpp_source.html#l01537">CMakeProfileDBApp::x_CreateDeltaList()</a>, <a class="el" href="makeprofiledb_8cpp_source.html#l01392">CMakeProfileDBApp::x_MakeVol()</a>, <a class="el" href="makeprofiledb_8cpp_source.html#l00917">CMakeProfileDBApp::x_RPSAddFirstSequence()</a>, and <a class="el" href="makeprofiledb_8cpp_source.html#l01596">CMakeProfileDBApp::x_UpdateDelta()</a>.</p>
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<a id="a40fd611105508637388817aea9fb7c1e"></a>
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||
<h2 class="memtitle"><span class="permalink"><a href="#a40fd611105508637388817aea9fb7c1e">◆ </a></span>GetQuerySequenceData()</h2>
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<td class="memname">void CPssm::GetQuerySequenceData </td>
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||
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||
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|
||
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|
||
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|
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||
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||
<p>Retrieve the query sequence data in ncbistdaa format. </p>
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||
<dl class="params"><dt>Parameters</dt><dd>
|
||
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|
||
<tr><td class="paramname">sequence</td><td>object on which to store the sequence, it will be empty if there is no sequence data available [in|out] </td></tr>
|
||
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|
||
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|
||
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00077">77</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8hpp_source.html#l00766">CPssm_Base::CanGetQuery()</a>, <a class="el" href="seqport__util_8cpp_source.html#l00918">CSeqportUtil::Convert()</a>, <a class="el" href="njn__matrix_8hpp_source.html#l00613">copy()</a>, <a class="el" href="Seq__data___8hpp_source.html#l00113">CSeq_data_Base::e_Ncbistdaa</a>, <a class="el" href="serialbase_8hpp_source.html#l00347">CAliasBase< TPrim >::Get()</a>, <a class="el" href="Bioseq___8hpp_source.html#l00336">CBioseq_Base::GetInst()</a>, <a class="el" href="Seq__data___8hpp_source.html#l00690">CSeq_data_Base::GetNcbistdaa()</a>, <a class="el" href="Pssm___8hpp_source.html#l00772">CPssm_Base::GetQuery()</a>, <a class="el" href="Pssm_8cpp_source.html#l00062">GetQueryLength()</a>, <a class="el" href="Seq__entry___8cpp_source.html#l00102">CSeq_entry_Base::GetSeq()</a>, <a class="el" href="Seq__inst___8hpp_source.html#l00817">CSeq_inst_Base::GetSeq_data()</a>, <a class="el" href="Seq__data___8hpp_source.html#l00684">CSeq_data_Base::IsNcbistdaa()</a>, and <a class="el" href="serialbase_8hpp_source.html#l00351">CAliasBase< TPrim >::Set()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="makeprofiledb_8cpp_source.html#l00864">CMakeProfileDBApp::x_RPSUpdateStatistics()</a>.</p>
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<a id="ab104a83ef6732d70e8f60ca7196655bf"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ab104a83ef6732d70e8f60ca7196655bf">◆ </a></span>operator=()</h2>
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<div class="memitem">
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<td class="memname"><a class="el" href="classCPssm.html">CPssm</a>& CPssm::operator= </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCPssm.html">CPssm</a> & </td>
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<td class="paramname"><em>value</em></td><td>)</td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<a id="a3633131b026372cf19e85b62f987e9dc"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a3633131b026372cf19e85b62f987e9dc">◆ </a></span>SetH()</h2>
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<td class="memname">void CPssm::SetH </td>
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<td>(</td>
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<td class="paramtype">double </td>
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<td class="paramname"><em>val</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00170">170</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8cpp_source.html#l00121">CPssm_Base::SetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00687">CPssmFinalData_Base::SetH()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="psiblast__impl_8cpp_source.html#l00122">CPsiBlastImpl::Run()</a>, and <a class="el" href="pssm__engine_8cpp_source.html#l00625">CPssmEngine::x_PSIMatrix2Asn1()</a>.</p>
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<a id="a3099acf7b7abba507dc9bc4e15b8ea34"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a3099acf7b7abba507dc9bc4e15b8ea34">◆ </a></span>SetHUngapped()</h2>
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<td class="memname">void CPssm::SetHUngapped </td>
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<td class="paramtype">double </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00188">188</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8cpp_source.html#l00121">CPssm_Base::SetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00878">CPssmFinalData_Base::SetHUngapped()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="psiblast__impl_8cpp_source.html#l00122">CPsiBlastImpl::Run()</a>, and <a class="el" href="pssm__engine_8cpp_source.html#l00625">CPssmEngine::x_PSIMatrix2Asn1()</a>.</p>
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<a id="ad82794dd238dcd21eb59141ec18a0d5e"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ad82794dd238dcd21eb59141ec18a0d5e">◆ </a></span>SetKappa()</h2>
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<td class="memname">void CPssm::SetKappa </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00164">164</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8cpp_source.html#l00121">CPssm_Base::SetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00640">CPssmFinalData_Base::SetKappa()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="psiblast__impl_8cpp_source.html#l00122">CPsiBlastImpl::Run()</a>, and <a class="el" href="pssm__engine_8cpp_source.html#l00625">CPssmEngine::x_PSIMatrix2Asn1()</a>.</p>
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<a id="af52a8100a377e23dc58becbcd0180740"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#af52a8100a377e23dc58becbcd0180740">◆ </a></span>SetKappaUngapped()</h2>
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<td class="memname">void CPssm::SetKappaUngapped </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00182">182</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8cpp_source.html#l00121">CPssm_Base::SetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00831">CPssmFinalData_Base::SetKappaUngapped()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="psiblast__impl_8cpp_source.html#l00122">CPsiBlastImpl::Run()</a>, and <a class="el" href="pssm__engine_8cpp_source.html#l00625">CPssmEngine::x_PSIMatrix2Asn1()</a>.</p>
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<a id="af5e11cbb4081651567bed4947b95aeeb"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#af5e11cbb4081651567bed4947b95aeeb">◆ </a></span>SetLambda()</h2>
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<td class="memname">void CPssm::SetLambda </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00158">158</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8cpp_source.html#l00121">CPssm_Base::SetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00593">CPssmFinalData_Base::SetLambda()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="psiblast__impl_8cpp_source.html#l00122">CPsiBlastImpl::Run()</a>, and <a class="el" href="pssm__engine_8cpp_source.html#l00625">CPssmEngine::x_PSIMatrix2Asn1()</a>.</p>
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<a id="a5318efd1db3eea106377a5fc70bdaf14"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a5318efd1db3eea106377a5fc70bdaf14">◆ </a></span>SetLambdaUngapped()</h2>
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<td class="memname">void CPssm::SetLambdaUngapped </td>
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<td>(</td>
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<td class="paramtype">double </td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8cpp_source.html#l00176">176</a> of file <a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Pssm___8cpp_source.html#l00121">CPssm_Base::SetFinalData()</a>, <a class="el" href="PssmFinalData___8hpp_source.html#l00784">CPssmFinalData_Base::SetLambdaUngapped()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="psiblast__impl_8cpp_source.html#l00122">CPsiBlastImpl::Run()</a>, and <a class="el" href="pssm__engine_8cpp_source.html#l00625">CPssmEngine::x_PSIMatrix2Asn1()</a>.</p>
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<h2 class="groupheader">Member Data Documentation</h2>
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<a id="a7be806b63490460c7a07550472f71e4e"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a7be806b63490460c7a07550472f71e4e">◆ </a></span>kInvalidStat</h2>
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<td class="memname"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> double CPssm::kInvalidStat = 0.0</td>
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<p class="definition">Definition at line <a class="el" href="Pssm_8hpp_source.html#l00071">71</a> of file <a class="el" href="Pssm_8hpp_source.html">Pssm.hpp</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Pssm_8cpp_source.html#l00120">GetH()</a>, <a class="el" href="Pssm_8cpp_source.html#l00147">GetHUngapped()</a>, <a class="el" href="Pssm_8cpp_source.html#l00111">GetKappa()</a>, <a class="el" href="Pssm_8cpp_source.html#l00138">GetKappaUngapped()</a>, <a class="el" href="Pssm_8cpp_source.html#l00102">GetLambda()</a>, <a class="el" href="Pssm_8cpp_source.html#l00129">GetLambdaUngapped()</a>, and <a class="el" href="psiblast__aux__priv_8cpp_source.html#l00076">PsiBlastSetupScoreBlock()</a>.</p>
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</div>
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<hr/>The documentation for this class was generated from the following files:<ul>
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||
<li>include/objects/scoremat/<a class="el" href="Pssm_8hpp_source.html">Pssm.hpp</a></li>
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<li>src/objects/scoremat/<a class="el" href="Pssm_8cpp_source.html">Pssm.cpp</a></li>
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</small></address>
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<address style="align: right;"><small>Modified on Fri Sep 20 14:57:10 2024 by modify_doxy.py rev. 669887</small></address>
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