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821 lines
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<a href="#pub-methods">Public Member Functions</a> |
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<a href="#pri-methods">Private Member Functions</a> |
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<a href="classCDense__diag-members.html">List of all members</a> </div>
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<div class="title">CDense_diag Class Reference</div> </div>
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<p>
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<a class="el" href = "https://www.ncbi.nlm.nih.gov/toolkitbookgh/?term=CDense_diag">Search Toolkit Book for <i>CDense_diag</i></a>
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</p>
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<p><code>#include <<a class="el" href="Dense__diag_8hpp_source.html">objects/seqalign/Dense_diag.hpp</a>></code></p>
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<div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
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<img id="dynsection-0-trigger" src="closed.png" alt="+"/> Inheritance diagram for CDense_diag:</div>
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<div class="center"><img src="img__inherit__graph/classCDense__diag__inherit__graph.png" border="0" usemap="#aCDense__diag_inherit__map" alt="Inheritance graph"/></div>
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<map name="aCDense__diag_inherit__map" id="aCDense__diag_inherit__map">
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<area shape="rect" title=" " alt="" coords="24,304,125,331"/>
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<area shape="rect" href="classCDense__diag__Base.html" title="for (multiway) diagonals" alt="" coords="5,229,144,256"/>
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</map>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
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<div id="dynsection-1" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
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<img id="dynsection-1-trigger" src="closed.png" alt="+"/> Collaboration diagram for CDense_diag:</div>
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<div id="dynsection-1-summary" class="dynsummary" style="display:block;">
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</div>
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<div id="dynsection-1-content" class="dyncontent" style="display:none;">
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<div class="center"><img src="img__coll__graph/classCDense__diag__coll__graph.png" border="0" usemap="#aCDense__diag_coll__map" alt="Collaboration graph"/></div>
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<map name="aCDense__diag_coll__map" id="aCDense__diag_coll__map">
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<area shape="rect" title=" " alt="" coords="97,349,198,376"/>
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<area shape="rect" href="classCDense__diag__Base.html" title="for (multiway) diagonals" alt="" coords="78,273,217,300"/>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr class="memitem:ad48a724b529be5d52d62916c24878818"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#ad48a724b529be5d52d62916c24878818">CDense_diag</a> (void)</td></tr>
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<tr class="separator:ad48a724b529be5d52d62916c24878818"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ae731ed79147466ef300ac35a21bb99f2"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#ae731ed79147466ef300ac35a21bb99f2">~CDense_diag</a> (void)</td></tr>
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<tr class="separator:ae731ed79147466ef300ac35a21bb99f2"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a6a44208c5cf0a68e0b6cc9a00c13cbd2"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#a6a44208c5cf0a68e0b6cc9a00c13cbd2">CheckNumRows</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:a6a44208c5cf0a68e0b6cc9a00c13cbd2"><td class="mdescLeft"> </td><td class="mdescRight">Validators. <a href="classCDense__diag.html#a6a44208c5cf0a68e0b6cc9a00c13cbd2">More...</a><br /></td></tr>
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<tr class="separator:a6a44208c5cf0a68e0b6cc9a00c13cbd2"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ad1e5d3151e5a7018ef2ebd5b2abe740d"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#ad1e5d3151e5a7018ef2ebd5b2abe740d">Validate</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:ad1e5d3151e5a7018ef2ebd5b2abe740d"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ab77c6b2821afb5b7b697396a691d1664"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCRange.html">CRange</a>< <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#ab77c6b2821afb5b7b697396a691d1664">GetSeqRange</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ab77c6b2821afb5b7b697396a691d1664"><td class="mdescLeft"> </td><td class="mdescRight">GetSeqRange. <a href="classCDense__diag.html#ab77c6b2821afb5b7b697396a691d1664">More...</a><br /></td></tr>
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<tr class="separator:ab77c6b2821afb5b7b697396a691d1664"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a2b29bcc3eac4d35a247d988d69ff3dc4"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#a2b29bcc3eac4d35a247d988d69ff3dc4">GetSeqStart</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a2b29bcc3eac4d35a247d988d69ff3dc4"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a3870e938a0a100fd50943bc22a14f1ff"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#a3870e938a0a100fd50943bc22a14f1ff">GetSeqStop</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a3870e938a0a100fd50943bc22a14f1ff"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a384ba4202a308909b068f9a94d95f63b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#a384ba4202a308909b068f9a94d95f63b">GetSeqStrand</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a384ba4202a308909b068f9a94d95f63b"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a3639fe612e2af8be3f05a89dfb0a0e87"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#a3639fe612e2af8be3f05a89dfb0a0e87">OffsetRow</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>, <a class="el" href="group__AppFramework.html#ga92c3033316f74e84da312174e871d85c">TSignedSeqPos</a> <a class="el" href="url__tooltip__handler_8cpp.html#af1a7c6ddf735b32939485fddbaec4e75">offset</a>)</td></tr>
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<tr class="memdesc:a3639fe612e2af8be3f05a89dfb0a0e87"><td class="mdescLeft"> </td><td class="mdescRight">Offset row's coords. <a href="classCDense__diag.html#a3639fe612e2af8be3f05a89dfb0a0e87">More...</a><br /></td></tr>
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<tr class="separator:a3639fe612e2af8be3f05a89dfb0a0e87"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aac8f13e7ae4a3e66cabd8c580b856396"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSeq__interval.html">CSeq_interval</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#aac8f13e7ae4a3e66cabd8c580b856396">CreateRowSeq_interval</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="string__bind_8c.html#a2715889d5feef62a0535c302cf093382">row</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:aac8f13e7ae4a3e66cabd8c580b856396"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCDense__diag__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCDense__diag__Base')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCDense__diag__Base.html">CDense_diag_Base</a></td></tr>
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<tr class="memitem:ga44af1d5d13ce8b8659e3a91e52fa4e40 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga44af1d5d13ce8b8659e3a91e52fa4e40">CDense_diag_Base</a> (void)</td></tr>
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<tr class="separator:ga44af1d5d13ce8b8659e3a91e52fa4e40 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6835876d37aae0401f025483bc8480f9 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga6835876d37aae0401f025483bc8480f9">~CDense_diag_Base</a> (void)</td></tr>
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<tr class="separator:ga6835876d37aae0401f025483bc8480f9 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga71ddf53e2a4a452f1c7bc5c66c3fdc31 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga71ddf53e2a4a452f1c7bc5c66c3fdc31">DECLARE_INTERNAL_TYPE_INFO</a> ()</td></tr>
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<tr class="separator:ga71ddf53e2a4a452f1c7bc5c66c3fdc31 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga118a5aa7e62900655ac6f23ab2ff1060 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga118a5aa7e62900655ac6f23ab2ff1060">IsSetDim</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga118a5aa7e62900655ac6f23ab2ff1060 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">dimensionality <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Dim data member. <a href="group__dataspec__NCBI__Seqalign.html#ga118a5aa7e62900655ac6f23ab2ff1060">More...</a><br /></td></tr>
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<tr class="separator:ga118a5aa7e62900655ac6f23ab2ff1060 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga936bca6d188c28a91bf18b63f42b3c69 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga936bca6d188c28a91bf18b63f42b3c69">CanGetDim</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga936bca6d188c28a91bf18b63f42b3c69 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetDim method. <a href="group__dataspec__NCBI__Seqalign.html#ga936bca6d188c28a91bf18b63f42b3c69">More...</a><br /></td></tr>
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<tr class="separator:ga936bca6d188c28a91bf18b63f42b3c69 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga92bda02cfc24e3fce4cc9d05ddb2bca6 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga92bda02cfc24e3fce4cc9d05ddb2bca6">ResetDim</a> (void)</td></tr>
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<tr class="memdesc:ga92bda02cfc24e3fce4cc9d05ddb2bca6 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Dim data member. <a href="group__dataspec__NCBI__Seqalign.html#ga92bda02cfc24e3fce4cc9d05ddb2bca6">More...</a><br /></td></tr>
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<tr class="separator:ga92bda02cfc24e3fce4cc9d05ddb2bca6 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad5d1d7f1c753bf60854a244287b2271d inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gad5d1d7f1c753bf60854a244287b2271d">SetDefaultDim</a> (void)</td></tr>
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<tr class="memdesc:gad5d1d7f1c753bf60854a244287b2271d inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign default value to Dim data member. <a href="group__dataspec__NCBI__Seqalign.html#gad5d1d7f1c753bf60854a244287b2271d">More...</a><br /></td></tr>
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<tr class="separator:gad5d1d7f1c753bf60854a244287b2271d inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga806015c3aa9f7296b0dd7a8335e8ff5c inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga806015c3aa9f7296b0dd7a8335e8ff5c">GetDim</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga806015c3aa9f7296b0dd7a8335e8ff5c inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Dim member data. <a href="group__dataspec__NCBI__Seqalign.html#ga806015c3aa9f7296b0dd7a8335e8ff5c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga806015c3aa9f7296b0dd7a8335e8ff5c inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5a6b4622da60fcd27af67dd6b14e8a0e inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5a6b4622da60fcd27af67dd6b14e8a0e">SetDim</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga5a6b4622da60fcd27af67dd6b14e8a0e inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Dim data member. <a href="group__dataspec__NCBI__Seqalign.html#ga5a6b4622da60fcd27af67dd6b14e8a0e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5a6b4622da60fcd27af67dd6b14e8a0e inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae6fda620e9effa746756ff8f4ba95d79 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae6fda620e9effa746756ff8f4ba95d79">SetDim</a> (void)</td></tr>
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||
<tr class="memdesc:gae6fda620e9effa746756ff8f4ba95d79 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Dim data member. <a href="group__dataspec__NCBI__Seqalign.html#gae6fda620e9effa746756ff8f4ba95d79">More...</a><br /></td></tr>
|
||
<tr class="separator:gae6fda620e9effa746756ff8f4ba95d79 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4bf24f3fd1001faa8907c9be955f8953 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga4bf24f3fd1001faa8907c9be955f8953">IsSetIds</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga4bf24f3fd1001faa8907c9be955f8953 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">sequences in order <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Ids data member. <a href="group__dataspec__NCBI__Seqalign.html#ga4bf24f3fd1001faa8907c9be955f8953">More...</a><br /></td></tr>
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||
<tr class="separator:ga4bf24f3fd1001faa8907c9be955f8953 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga63ccfad0759ec44f1851a6f3203b87c2 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga63ccfad0759ec44f1851a6f3203b87c2">CanGetIds</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga63ccfad0759ec44f1851a6f3203b87c2 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetIds method. <a href="group__dataspec__NCBI__Seqalign.html#ga63ccfad0759ec44f1851a6f3203b87c2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga63ccfad0759ec44f1851a6f3203b87c2 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga10ed536473eb2d640f4ed09c35333610 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga10ed536473eb2d640f4ed09c35333610">ResetIds</a> (void)</td></tr>
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||
<tr class="memdesc:ga10ed536473eb2d640f4ed09c35333610 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Ids data member. <a href="group__dataspec__NCBI__Seqalign.html#ga10ed536473eb2d640f4ed09c35333610">More...</a><br /></td></tr>
|
||
<tr class="separator:ga10ed536473eb2d640f4ed09c35333610 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga806bd07c99d3755f15f5958d8f6badb0 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#ga7fc18e16e2c6b749ff18e995b8f81f4c">TIds</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga806bd07c99d3755f15f5958d8f6badb0">GetIds</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga806bd07c99d3755f15f5958d8f6badb0 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Ids member data. <a href="group__dataspec__NCBI__Seqalign.html#ga806bd07c99d3755f15f5958d8f6badb0">More...</a><br /></td></tr>
|
||
<tr class="separator:ga806bd07c99d3755f15f5958d8f6badb0 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaffd80cdbf595e7d0cd1baecda1d45f0b inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga7fc18e16e2c6b749ff18e995b8f81f4c">TIds</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaffd80cdbf595e7d0cd1baecda1d45f0b">SetIds</a> (void)</td></tr>
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||
<tr class="memdesc:gaffd80cdbf595e7d0cd1baecda1d45f0b inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Ids data member. <a href="group__dataspec__NCBI__Seqalign.html#gaffd80cdbf595e7d0cd1baecda1d45f0b">More...</a><br /></td></tr>
|
||
<tr class="separator:gaffd80cdbf595e7d0cd1baecda1d45f0b inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga0ebe1b71eaaf6fe61ea2e91f8255b378 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga0ebe1b71eaaf6fe61ea2e91f8255b378">IsSetStarts</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga0ebe1b71eaaf6fe61ea2e91f8255b378 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">start OFFSETS in ids order <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Starts data member. <a href="group__dataspec__NCBI__Seqalign.html#ga0ebe1b71eaaf6fe61ea2e91f8255b378">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0ebe1b71eaaf6fe61ea2e91f8255b378 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga3cdb76dccc892cd2c4408877db542abf inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga3cdb76dccc892cd2c4408877db542abf">CanGetStarts</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga3cdb76dccc892cd2c4408877db542abf inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetStarts method. <a href="group__dataspec__NCBI__Seqalign.html#ga3cdb76dccc892cd2c4408877db542abf">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3cdb76dccc892cd2c4408877db542abf inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga9b16760062b9b9f110dedef0e7ae6959 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga9b16760062b9b9f110dedef0e7ae6959">ResetStarts</a> (void)</td></tr>
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||
<tr class="memdesc:ga9b16760062b9b9f110dedef0e7ae6959 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Starts data member. <a href="group__dataspec__NCBI__Seqalign.html#ga9b16760062b9b9f110dedef0e7ae6959">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9b16760062b9b9f110dedef0e7ae6959 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gad6920b5fc6fcc8da2c0584eda053e88e inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#ga722d0c260fe46ee43352aef655ee7407">TStarts</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gad6920b5fc6fcc8da2c0584eda053e88e">GetStarts</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gad6920b5fc6fcc8da2c0584eda053e88e inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Starts member data. <a href="group__dataspec__NCBI__Seqalign.html#gad6920b5fc6fcc8da2c0584eda053e88e">More...</a><br /></td></tr>
|
||
<tr class="separator:gad6920b5fc6fcc8da2c0584eda053e88e inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga857b5070bf0411caaf13caa56ece7960 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga722d0c260fe46ee43352aef655ee7407">TStarts</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga857b5070bf0411caaf13caa56ece7960">SetStarts</a> (void)</td></tr>
|
||
<tr class="memdesc:ga857b5070bf0411caaf13caa56ece7960 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Starts data member. <a href="group__dataspec__NCBI__Seqalign.html#ga857b5070bf0411caaf13caa56ece7960">More...</a><br /></td></tr>
|
||
<tr class="separator:ga857b5070bf0411caaf13caa56ece7960 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaee18ce13c93285d1e1993e6fed56f5f2 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaee18ce13c93285d1e1993e6fed56f5f2">IsSetLen</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gaee18ce13c93285d1e1993e6fed56f5f2 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">len of aligned segments <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Len data member. <a href="group__dataspec__NCBI__Seqalign.html#gaee18ce13c93285d1e1993e6fed56f5f2">More...</a><br /></td></tr>
|
||
<tr class="separator:gaee18ce13c93285d1e1993e6fed56f5f2 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gab8894bc42f38efa60db0a9bf6f21021e inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab8894bc42f38efa60db0a9bf6f21021e">CanGetLen</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gab8894bc42f38efa60db0a9bf6f21021e inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetLen method. <a href="group__dataspec__NCBI__Seqalign.html#gab8894bc42f38efa60db0a9bf6f21021e">More...</a><br /></td></tr>
|
||
<tr class="separator:gab8894bc42f38efa60db0a9bf6f21021e inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga1246a8a1ac077101b54bb0e9b2f9c6df inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga1246a8a1ac077101b54bb0e9b2f9c6df">ResetLen</a> (void)</td></tr>
|
||
<tr class="memdesc:ga1246a8a1ac077101b54bb0e9b2f9c6df inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Len data member. <a href="group__dataspec__NCBI__Seqalign.html#ga1246a8a1ac077101b54bb0e9b2f9c6df">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1246a8a1ac077101b54bb0e9b2f9c6df inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga659bf8d9e124c63caed41cd2e14ade6e inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga048e973389d59d7af6d40d981e8119d1">TLen</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga659bf8d9e124c63caed41cd2e14ade6e">GetLen</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga659bf8d9e124c63caed41cd2e14ade6e inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Len member data. <a href="group__dataspec__NCBI__Seqalign.html#ga659bf8d9e124c63caed41cd2e14ade6e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga659bf8d9e124c63caed41cd2e14ade6e inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae7a9130fc860e4a2bd893f4ffa8d9a8b inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae7a9130fc860e4a2bd893f4ffa8d9a8b">SetLen</a> (<a class="el" href="group__dataspec__NCBI__Seqalign.html#ga048e973389d59d7af6d40d981e8119d1">TLen</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:gae7a9130fc860e4a2bd893f4ffa8d9a8b inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Len data member. <a href="group__dataspec__NCBI__Seqalign.html#gae7a9130fc860e4a2bd893f4ffa8d9a8b">More...</a><br /></td></tr>
|
||
<tr class="separator:gae7a9130fc860e4a2bd893f4ffa8d9a8b inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga3b38869be7a6b6f52ad3562d63afb598 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga048e973389d59d7af6d40d981e8119d1">TLen</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga3b38869be7a6b6f52ad3562d63afb598">SetLen</a> (void)</td></tr>
|
||
<tr class="memdesc:ga3b38869be7a6b6f52ad3562d63afb598 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Len data member. <a href="group__dataspec__NCBI__Seqalign.html#ga3b38869be7a6b6f52ad3562d63afb598">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3b38869be7a6b6f52ad3562d63afb598 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaa8db1e9eb1763a762d68a89f56064adb inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaa8db1e9eb1763a762d68a89f56064adb">IsSetStrands</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gaa8db1e9eb1763a762d68a89f56064adb inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Strands data member. <a href="group__dataspec__NCBI__Seqalign.html#gaa8db1e9eb1763a762d68a89f56064adb">More...</a><br /></td></tr>
|
||
<tr class="separator:gaa8db1e9eb1763a762d68a89f56064adb inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae15baf0d14a70e66f0e5a3a4713bbb2f inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gae15baf0d14a70e66f0e5a3a4713bbb2f">CanGetStrands</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae15baf0d14a70e66f0e5a3a4713bbb2f inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetStrands method. <a href="group__dataspec__NCBI__Seqalign.html#gae15baf0d14a70e66f0e5a3a4713bbb2f">More...</a><br /></td></tr>
|
||
<tr class="separator:gae15baf0d14a70e66f0e5a3a4713bbb2f inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaf55a2ef5538806411459150c5e2e0ae4 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaf55a2ef5538806411459150c5e2e0ae4">ResetStrands</a> (void)</td></tr>
|
||
<tr class="memdesc:gaf55a2ef5538806411459150c5e2e0ae4 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Strands data member. <a href="group__dataspec__NCBI__Seqalign.html#gaf55a2ef5538806411459150c5e2e0ae4">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf55a2ef5538806411459150c5e2e0ae4 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gac6aaf3d2b270167902aabd42e76651c9 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#gaab3d672313ff4ebbc88acb0b1d494144">TStrands</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gac6aaf3d2b270167902aabd42e76651c9">GetStrands</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gac6aaf3d2b270167902aabd42e76651c9 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Strands member data. <a href="group__dataspec__NCBI__Seqalign.html#gac6aaf3d2b270167902aabd42e76651c9">More...</a><br /></td></tr>
|
||
<tr class="separator:gac6aaf3d2b270167902aabd42e76651c9 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5de7ce91442d605fcdb8985c34cc5ed3 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaab3d672313ff4ebbc88acb0b1d494144">TStrands</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5de7ce91442d605fcdb8985c34cc5ed3">SetStrands</a> (void)</td></tr>
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||
<tr class="memdesc:ga5de7ce91442d605fcdb8985c34cc5ed3 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Strands data member. <a href="group__dataspec__NCBI__Seqalign.html#ga5de7ce91442d605fcdb8985c34cc5ed3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5de7ce91442d605fcdb8985c34cc5ed3 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaf8e08aad15fec25048231247f8b090d2 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaf8e08aad15fec25048231247f8b090d2">IsSetScores</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:gaf8e08aad15fec25048231247f8b090d2 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Scores data member. <a href="group__dataspec__NCBI__Seqalign.html#gaf8e08aad15fec25048231247f8b090d2">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf8e08aad15fec25048231247f8b090d2 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga05bf7cee512ebaf111c290a7a5ddf53a inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga05bf7cee512ebaf111c290a7a5ddf53a">CanGetScores</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga05bf7cee512ebaf111c290a7a5ddf53a inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetScores method. <a href="group__dataspec__NCBI__Seqalign.html#ga05bf7cee512ebaf111c290a7a5ddf53a">More...</a><br /></td></tr>
|
||
<tr class="separator:ga05bf7cee512ebaf111c290a7a5ddf53a inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5a14f399f4c1ef148feb45b4379fad16 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga5a14f399f4c1ef148feb45b4379fad16">ResetScores</a> (void)</td></tr>
|
||
<tr class="memdesc:ga5a14f399f4c1ef148feb45b4379fad16 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Scores data member. <a href="group__dataspec__NCBI__Seqalign.html#ga5a14f399f4c1ef148feb45b4379fad16">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5a14f399f4c1ef148feb45b4379fad16 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga19eecfbf7f2f84cbe9f600e37ee2bdb2 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Seqalign.html#gab3c025d4f1b43ef611ddb44d4002b24a">TScores</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga19eecfbf7f2f84cbe9f600e37ee2bdb2">GetScores</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga19eecfbf7f2f84cbe9f600e37ee2bdb2 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Scores member data. <a href="group__dataspec__NCBI__Seqalign.html#ga19eecfbf7f2f84cbe9f600e37ee2bdb2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga19eecfbf7f2f84cbe9f600e37ee2bdb2 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga1a7ac72694bdcb4e0d212ca7f2699381 inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab3c025d4f1b43ef611ddb44d4002b24a">TScores</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga1a7ac72694bdcb4e0d212ca7f2699381">SetScores</a> (void)</td></tr>
|
||
<tr class="memdesc:ga1a7ac72694bdcb4e0d212ca7f2699381 inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Scores data member. <a href="group__dataspec__NCBI__Seqalign.html#ga1a7ac72694bdcb4e0d212ca7f2699381">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1a7ac72694bdcb4e0d212ca7f2699381 inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga505d6603ec26fbdcf82ec5dfd5caa14e inherit pub_methods_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga505d6603ec26fbdcf82ec5dfd5caa14e">Reset</a> (void)</td></tr>
|
||
<tr class="memdesc:ga505d6603ec26fbdcf82ec5dfd5caa14e inherit pub_methods_classCDense__diag__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset the whole object. <a href="group__dataspec__NCBI__Seqalign.html#ga505d6603ec26fbdcf82ec5dfd5caa14e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga505d6603ec26fbdcf82ec5dfd5caa14e inherit pub_methods_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
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<tr class="memitem:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga8575b1015c4a4f3336b6e1c0a4324b71">CSerialObject</a> (void)</td></tr>
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<tr class="separator:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gaf278b96157abad20b5d944fb83d32fb1">~CSerialObject</a> (void)</td></tr>
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<tr class="separator:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCTypeInfo.html">CTypeInfo</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacb5d8a2e6878e58aeaeaf342081f0b7f">GetThisTypeInfo</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> =0</td></tr>
|
||
<tr class="separator:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">Assign</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &source, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>)</td></tr>
|
||
<tr class="memdesc:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Set object to copy of another one. <a href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">More...</a><br /></td></tr>
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||
<tr class="separator:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">Equals</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &object, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if both objects contain the same values. <a href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">More...</a><br /></td></tr>
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||
<tr class="separator:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">DebugDump</a> (<a class="el" href="classCDebugDumpContext.html">CDebugDumpContext</a> ddc, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method for dumping debug information. <a href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">More...</a><br /></td></tr>
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||
<tr class="separator:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga7382b4cd30306d9444f85abd912ff61e">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab5506012856f3627d88368a24e1eb254">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char *<a class="el" href="dbapi__sample__base_8hpp.html#a8334353b550f5c3b6d2ea57d716ab2e2">file_name</a>, <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> file_line) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">HasNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object data type has namespace name. <a href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">More...</a><br /></td></tr>
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<tr class="separator:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">GetNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace name. <a href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">More...</a><br /></td></tr>
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||
<tr class="separator:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">HasNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if data type has namespace prefix. <a href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">More...</a><br /></td></tr>
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||
<tr class="separator:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">GetNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace prefix. <a href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">More...</a><br /></td></tr>
|
||
<tr class="separator:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">More...</a><br /></td></tr>
|
||
<tr class="separator:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">CObject</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src)</td></tr>
|
||
<tr class="memdesc:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">More...</a><br /></td></tr>
|
||
<tr class="separator:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">~CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCObject.html">CObject</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src) <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">More...</a><br /></td></tr>
|
||
<tr class="separator:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">CanBeDeleted</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object can be deleted. <a href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">More...</a><br /></td></tr>
|
||
<tr class="separator:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">IsAllocatedInPool</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is allocated in memory pool (not system heap) <a href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">Referenced</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced. <a href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">ReferencedOnlyOnce</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced only once. <a href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">More...</a><br /></td></tr>
|
||
<tr class="separator:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">AddReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Add reference to object. <a href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">RemoveReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference to object. <a href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">More...</a><br /></td></tr>
|
||
<tr class="separator:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">ReleaseReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference without deleting object. <a href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">DoNotDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as not allocated in heap – do not delete this object. <a href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">More...</a><br /></td></tr>
|
||
<tr class="separator:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">DoDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as allocated in heap – object can be deleted. <a href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator for memory allocation. <a href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">operator new[]</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new[] operator for 'array' memory allocation. <a href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">More...</a><br /></td></tr>
|
||
<tr class="separator:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">operator delete</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator for memory deallocation. <a href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">More...</a><br /></td></tr>
|
||
<tr class="separator:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">operator delete[]</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete[] operator for memory deallocation. <a href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, void *place)</td></tr>
|
||
<tr class="memdesc:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator. <a href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">operator delete</a> (void *ptr, void *place)</td></tr>
|
||
<tr class="memdesc:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">More...</a><br /></td></tr>
|
||
<tr class="separator:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator using memory pool. <a href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">operator delete</a> (void *ptr, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
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||
<tr class="memitem:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ae8723856215191ef748f19ff73e8ba4e">CDebugDumpable</a> (void)</td></tr>
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||
<tr class="separator:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#acdeaaedfabb4cc4a64108dbb854f4b51">~CDebugDumpable</a> (void)</td></tr>
|
||
<tr class="separator:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a4ff9ec248a38f17b7d8deb3f78318a37">DebugDumpText</a> (ostream &<a class="el" href="events__unit__test_8cpp.html#ac3c18c078fe416626b6c1dcc3e780245">out</a>, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#aa0101dfdc0ae0cbd0cb1609c96f96229">DebugDumpFormat</a> (<a class="el" href="classCDebugDumpFormatter.html">CDebugDumpFormatter</a> &ddf, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a19047c92521e5f3ad2a14bab26a49b51">DumpToConsole</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-types"></a>
|
||
Private Types</h2></td></tr>
|
||
<tr class="memitem:a0000e157343501b63907dfe5d54cddbf"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCDense__diag__Base.html">CDense_diag_Base</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#a0000e157343501b63907dfe5d54cddbf">Tparent</a></td></tr>
|
||
<tr class="separator:a0000e157343501b63907dfe5d54cddbf"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
|
||
Private Member Functions</h2></td></tr>
|
||
<tr class="memitem:ada2b09f9c139142a069ccadbe8fad6b6"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#ada2b09f9c139142a069ccadbe8fad6b6">CDense_diag</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCDense__diag.html">CDense_diag</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:ada2b09f9c139142a069ccadbe8fad6b6"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:afdfb4e98c2d6fa5c66ab5a45e5606028"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCDense__diag.html">CDense_diag</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDense__diag.html#afdfb4e98c2d6fa5c66ab5a45e5606028">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCDense__diag.html">CDense_diag</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:afdfb4e98c2d6fa5c66ab5a45e5606028"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
|
||
Additional Inherited Members</h2></td></tr>
|
||
<tr class="inherit_header pub_types_classCDense__diag__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCDense__diag__Base')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCDense__diag__Base.html">CDense_diag_Base</a></td></tr>
|
||
<tr class="memitem:ga47b25f7b3694e4e2be668f4acf45d681 inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">enum class  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga47b25f7b3694e4e2be668f4acf45d681">E_memberIndex</a> { <br />
|
||
  <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681ad2c4d82f7037e318e1aa6f58d06bd153">e__allMandatory</a> = 0
|
||
, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681a45275be29706b9877c6a4ebff91ec126">e_dim</a>
|
||
, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681a2629f783bd7405f3bd90d91e4d8f003f">e_ids</a>
|
||
, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681a472e1d0625a46908a25dae26fa025271">e_starts</a>
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681a23dde4f7e0e82ec61dfb9fe7cd706714">e_len</a>
|
||
, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681ac95753a5dd5d84bef7ea1c1f3a05f6d1">e_strands</a>
|
||
, <a class="el" href="group__dataspec__NCBI__Seqalign.html#gga47b25f7b3694e4e2be668f4acf45d681a70ff524f05f8d90601b39ec2d13c9bf8">e_scores</a>
|
||
<br />
|
||
}</td></tr>
|
||
<tr class="separator:ga47b25f7b3694e4e2be668f4acf45d681 inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gafc2e63476bee82374298d05f8827d23b inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a></td></tr>
|
||
<tr class="separator:gafc2e63476bee82374298d05f8827d23b inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7fc18e16e2c6b749ff18e995b8f81f4c inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef vector< <a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSeq__id.html">CSeq_id</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga7fc18e16e2c6b749ff18e995b8f81f4c">TIds</a></td></tr>
|
||
<tr class="separator:ga7fc18e16e2c6b749ff18e995b8f81f4c inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga722d0c260fe46ee43352aef655ee7407 inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef vector< <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga722d0c260fe46ee43352aef655ee7407">TStarts</a></td></tr>
|
||
<tr class="separator:ga722d0c260fe46ee43352aef655ee7407 inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga048e973389d59d7af6d40d981e8119d1 inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga048e973389d59d7af6d40d981e8119d1">TLen</a></td></tr>
|
||
<tr class="separator:ga048e973389d59d7af6d40d981e8119d1 inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaab3d672313ff4ebbc88acb0b1d494144 inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef vector< <a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gaab3d672313ff4ebbc88acb0b1d494144">TStrands</a></td></tr>
|
||
<tr class="separator:gaab3d672313ff4ebbc88acb0b1d494144 inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab3c025d4f1b43ef611ddb44d4002b24a inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef vector< <a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCScore.html">CScore</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gab3c025d4f1b43ef611ddb44d4002b24a">TScores</a></td></tr>
|
||
<tr class="separator:gab3c025d4f1b43ef611ddb44d4002b24a inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga67382bb6afdaf8df9cb0135ea8b0b488 inherit pub_types_classCDense__diag__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSerialObject_1_1CMemberIndex.html">Tparent::CMemberIndex</a>< <a class="el" href="group__dataspec__NCBI__Seqalign.html#ga47b25f7b3694e4e2be668f4acf45d681">E_memberIndex</a>, 7 > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Seqalign.html#ga67382bb6afdaf8df9cb0135ea8b0b488">TmemberIndex</a></td></tr>
|
||
<tr class="separator:ga67382bb6afdaf8df9cb0135ea8b0b488 inherit pub_types_classCDense__diag__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_types_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCObject')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> { <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca2b8c59f649cc88eeb7eaeba939e2838d">eAllocFillNone</a> = 1
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca336d7ff658b673c2e8fe3aed9b155f04">eAllocFillZero</a>
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588ccab3631bf1c36b77f950d94372290deb76">eAllocFillPattern</a>
|
||
}</td></tr>
|
||
<tr class="memdesc:ga3cf5f3ac0aef32c4aab1fa66513588cc"><td class="mdescLeft"> </td><td class="mdescRight">Control filling of newly allocated memory. <a href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCObjectCounterLocker.html">CObjectCounterLocker</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">TLockerType</a></td></tr>
|
||
<tr class="memdesc:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Default locker type for <a class="el" href="classCRef.html" title="CRef –.">CRef</a>. <a href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef atomic< <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">TCounter</a></td></tr>
|
||
<tr class="memdesc:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Counter type is CAtomiCounter. <a href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">More...</a><br /></td></tr>
|
||
<tr class="separator:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a></td></tr>
|
||
<tr class="memdesc:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Alias for value type of counter. <a href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab2a92c7a5b5900317294b85e854db07e">SetVerifyDataThread</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga2e3bead397d7ec0fffde866cd890267e">SetVerifyDataGlobal</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gada3dbb83951d0bed9bde06c6c4ede9e2">UnassignedString</a> (void)</td></tr>
|
||
<tr class="separator:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__STL.html#ga88e22aab83a29bae20f5354e89b041e3">CStringUTF8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga123d82fb69550b6418ad5d69e752873a">UnassignedStringUTF8</a> (void)</td></tr>
|
||
<tr class="separator:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga1d897c6ce0f541df2487600cedd9f40a">UnassignedByte</a> (void)</td></tr>
|
||
<tr class="separator:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">ThrowNullPointerException</a> (void)</td></tr>
|
||
<tr class="memdesc:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method to throw null pointer exception. <a href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">More...</a><br /></td></tr>
|
||
<tr class="separator:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae042a181e665dd40945c1c1a7a6bc5d1">ThrowNullPointerException</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> type_info &<a class="el" href="structtype.html">type</a>)</td></tr>
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||
<tr class="separator:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga4b6f1beef2a1f37c68f7f3b1aac471d8">GetAllocFillMode</a> (void)</td></tr>
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||
<tr class="separator:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga42eceef165a83cc081837a373ab6dd67">SetAllocFillMode</a> (<a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> <a class="el" href="mdb__load_8c.html#a1ea5d0cb93f22f7d0fdf804bd68c3326">mode</a>)</td></tr>
|
||
<tr class="separator:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">SetAllocFillMode</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Set mode from configuration parameter value. <a href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">More...</a><br /></td></tr>
|
||
<tr class="separator:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_static_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
|
||
<tr class="memitem:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ab6ba54280c562230f65733cca0560c83">EnableDebugDump</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> on)</td></tr>
|
||
<tr class="separator:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_static_attribs_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacf732f6a9f64037d0cad32a72f7522ea">ms_UnassignedStr</a> = "<*unassigned*>"</td></tr>
|
||
<tr class="separator:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6baaf827f8d2e4f98be84d91d511a716">ms_UnassignedByte</a> = char(0xcd)</td></tr>
|
||
<tr class="separator:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_static_attribs_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">eCounterBitsCanBeDeleted</a> = 1 << 0</td></tr>
|
||
<tr class="memdesc:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define possible object states. <a href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">eCounterBitsInPlainHeap</a> = 1 << 1</td></tr>
|
||
<tr class="memdesc:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Heap signature was found. <a href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">More...</a><br /></td></tr>
|
||
<tr class="separator:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">eCounterBitsPlaceMask</a></td></tr>
|
||
<tr class="memdesc:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mask for 'in heap' state flags. <a href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">More...</a><br /></td></tr>
|
||
<tr class="separator:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">eCounterStep</a> = 1 << 2</td></tr>
|
||
<tr class="memdesc:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Skip over the "in heap" bits. <a href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">eCounterValid</a> = <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>(1) << (sizeof(<a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>) * 8 - 2)</td></tr>
|
||
<tr class="memdesc:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Minimal value for valid objects (reference counter is zero) Must be a single bit value. <a href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">More...</a><br /></td></tr>
|
||
<tr class="separator:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">eCounterStateMask</a></td></tr>
|
||
<tr class="memdesc:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Valid object, and object in heap. <a href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">More...</a><br /></td></tr>
|
||
<tr class="separator:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pro_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classCObject')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">DeleteThis</a> (void)</td></tr>
|
||
<tr class="memdesc:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Virtual method "deleting" this object. <a href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table>
|
||
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
|
||
<div class="textblock">
|
||
<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00058">58</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
|
||
</div><h2 class="groupheader">Member Typedef Documentation</h2>
|
||
<a id="a0000e157343501b63907dfe5d54cddbf"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#a0000e157343501b63907dfe5d54cddbf">◆ </a></span>Tparent</h2>
|
||
|
||
<div class="memitem">
|
||
<div class="memproto">
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||
<table class="mlabels">
|
||
<tr>
|
||
<td class="mlabels-left">
|
||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">typedef <a class="el" href="classCDense__diag__Base.html">CDense_diag_Base</a> <a class="el" href="classCDense__diag.html#a0000e157343501b63907dfe5d54cddbf">CDense_diag::Tparent</a></td>
|
||
</tr>
|
||
</table>
|
||
</td>
|
||
<td class="mlabels-right">
|
||
<span class="mlabels"><span class="mlabel">private</span></span> </td>
|
||
</tr>
|
||
</table>
|
||
</div><div class="memdoc">
|
||
|
||
<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00060">60</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
|
||
|
||
</div>
|
||
</div>
|
||
<h2 class="groupheader">Constructor & Destructor Documentation</h2>
|
||
<a id="ad48a724b529be5d52d62916c24878818"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#ad48a724b529be5d52d62916c24878818">◆ </a></span>CDense_diag() <span class="overload">[1/2]</span></h2>
|
||
|
||
<div class="memitem">
|
||
<div class="memproto">
|
||
<table class="mlabels">
|
||
<tr>
|
||
<td class="mlabels-left">
|
||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">CDense_diag::CDense_diag </td>
|
||
<td>(</td>
|
||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
|
||
<td></td>
|
||
</tr>
|
||
</table>
|
||
</td>
|
||
<td class="mlabels-right">
|
||
<span class="mlabels"><span class="mlabel">inline</span></span> </td>
|
||
</tr>
|
||
</table>
|
||
</div><div class="memdoc">
|
||
|
||
<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00093">93</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
|
||
|
||
</div>
|
||
</div>
|
||
<a id="ae731ed79147466ef300ac35a21bb99f2"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#ae731ed79147466ef300ac35a21bb99f2">◆ </a></span>~CDense_diag()</h2>
|
||
|
||
<div class="memitem">
|
||
<div class="memproto">
|
||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">CDense_diag::~CDense_diag </td>
|
||
<td>(</td>
|
||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
|
||
<td></td>
|
||
</tr>
|
||
</table>
|
||
</div><div class="memdoc">
|
||
|
||
<p class="definition">Definition at line <a class="el" href="Dense__diag_8cpp_source.html#l00053">53</a> of file <a class="el" href="Dense__diag_8cpp_source.html">Dense_diag.cpp</a>.</p>
|
||
|
||
</div>
|
||
</div>
|
||
<a id="ada2b09f9c139142a069ccadbe8fad6b6"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#ada2b09f9c139142a069ccadbe8fad6b6">◆ </a></span>CDense_diag() <span class="overload">[2/2]</span></h2>
|
||
|
||
<div class="memitem">
|
||
<div class="memproto">
|
||
<table class="mlabels">
|
||
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|
||
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|
||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">CDense_diag::CDense_diag </td>
|
||
<td>(</td>
|
||
<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCDense__diag.html">CDense_diag</a> & </td>
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<h2 class="groupheader">Member Function Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a6a44208c5cf0a68e0b6cc9a00c13cbd2">◆ </a></span>CheckNumRows()</h2>
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<td class="memname"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">CDense_diag::TDim</a> CDense_diag::CheckNumRows </td>
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<p>Validators. </p>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00125">125</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
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<p class="reference">References <a class="el" href="Dense__diag___8hpp_source.html#l00373">CDense_diag_Base::GetDim()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00410">CDense_diag_Base::GetIds()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00435">CDense_diag_Base::GetStarts()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, and <a class="el" href="namespacencbi_1_1grid_1_1netcache_1_1search_1_1fields.html#a0f3896dcec83a75496951b513af45a54">ncbi::grid::netcache::search::fields::size</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Dense__diag_8cpp_source.html#l00072">OffsetRow()</a>, and <a class="el" href="Dense__diag_8cpp_source.html#l00058">Validate()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aac8f13e7ae4a3e66cabd8c580b856396">◆ </a></span>CreateRowSeq_interval()</h2>
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<td class="memname"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSeq__interval.html">CSeq_interval</a> > CDense_diag::CreateRowSeq_interval </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> </td>
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<td class="paramname"><em>row</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8cpp_source.html#l00111">111</a> of file <a class="el" href="Dense__diag_8cpp_source.html">Dense_diag.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Dense__diag___8hpp_source.html#l00373">CDense_diag_Base::GetDim()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00410">CDense_diag_Base::GetIds()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00467">CDense_diag_Base::GetLen()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00435">CDense_diag_Base::GetStarts()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00507">CDense_diag_Base::GetStrands()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05078">NStr::IntToString()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00495">CDense_diag_Base::IsSetStrands()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="string__bind_8c_source.html#l00073">row</a>, <a class="el" href="Seq__interval___8hpp_source.html#l00392">CSeq_interval_Base::SetFrom()</a>, <a class="el" href="Seq__interval___8cpp_source.html#l00061">CSeq_interval_Base::SetId()</a>, <a class="el" href="Seq__interval___8hpp_source.html#l00486">CSeq_interval_Base::SetStrand()</a>, and <a class="el" href="Seq__interval___8hpp_source.html#l00439">CSeq_interval_Base::SetTo()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ab77c6b2821afb5b7b697396a691d1664">◆ </a></span>GetSeqRange()</h2>
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<td class="memname"><a class="el" href="classCRange.html">CRange</a>< <a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> > CDense_diag::GetSeqRange </td>
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|
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<p>GetSeqRange. </p>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00118">118</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
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||
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<p class="reference">References <a class="el" href="Dense__diag_8hpp_source.html#l00099">GetSeqStart()</a>, <a class="el" href="Dense__diag_8hpp_source.html#l00111">GetSeqStop()</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a2b29bcc3eac4d35a247d988d69ff3dc4">◆ </a></span>GetSeqStart()</h2>
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<td class="memname"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> CDense_diag::GetSeqStart </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="group__dataspec__NCBI__Seqalign.html#gafc2e63476bee82374298d05f8827d23b">TDim</a> </td>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00099">99</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
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<p class="reference">References <a class="el" href="Dense__diag___8hpp_source.html#l00373">CDense_diag_Base::GetDim()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00435">CDense_diag_Base::GetStarts()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Dense__diag_8hpp_source.html#l00118">GetSeqRange()</a>, and <a class="el" href="Dense__diag_8hpp_source.html#l00111">GetSeqStop()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a3870e938a0a100fd50943bc22a14f1ff">◆ </a></span>GetSeqStop()</h2>
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<td class="memname"><a class="el" href="group__AppFramework.html#ga7576cbabf7b457b1a66d0a1d985fe176">TSeqPos</a> CDense_diag::GetSeqStop </td>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8hpp_source.html#l00111">111</a> of file <a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a>.</p>
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<p class="reference">References <a class="el" href="Dense__diag___8hpp_source.html#l00467">CDense_diag_Base::GetLen()</a>, <a class="el" href="Dense__diag_8hpp_source.html#l00099">GetSeqStart()</a>, and <a class="el" href="string__bind_8c_source.html#l00073">row</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Dense__diag_8hpp_source.html#l00118">GetSeqRange()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a384ba4202a308909b068f9a94d95f63b">◆ </a></span>GetSeqStrand()</h2>
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<td class="memname"><a class="el" href="group__dataspec__NCBI__Seqloc.html#ga2d4d48fde1d3f62563eac193a3b5afae">ENa_strand</a> CDense_diag::GetSeqStrand </td>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8cpp_source.html#l00093">93</a> of file <a class="el" href="Dense__diag_8cpp_source.html">Dense_diag.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Dense__diag___8hpp_source.html#l00501">CDense_diag_Base::CanGetStrands()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00373">CDense_diag_Base::GetDim()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00507">CDense_diag_Base::GetStrands()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="string__bind_8c_source.html#l00073">row</a>, and <a class="el" href="namespacencbi_1_1grid_1_1netcache_1_1search_1_1fields.html#a0f3896dcec83a75496951b513af45a54">ncbi::grid::netcache::search::fields::size</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a3639fe612e2af8be3f05a89dfb0a0e87">◆ </a></span>OffsetRow()</h2>
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<td class="memname">void CDense_diag::OffsetRow </td>
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<td class="paramname"><em>offset</em> </td>
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<p>Offset row's coords. </p>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8cpp_source.html#l00072">72</a> of file <a class="el" href="Dense__diag_8cpp_source.html">Dense_diag.cpp</a>.</p>
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<p class="reference">References <a class="el" href="test__assert__impl_8h_source.html#l00173">_ASSERT</a>, <a class="el" href="Dense__diag_8hpp_source.html#l00125">CheckNumRows()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00373">CDense_diag_Base::GetDim()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00435">CDense_diag_Base::GetStarts()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="ftds100_2freetds_2replacements_8h_source.html#l00160">offset</a>, <a class="el" href="string__bind_8c_source.html#l00073">row</a>, and <a class="el" href="Dense__diag___8hpp_source.html#l00441">CDense_diag_Base::SetStarts()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#afdfb4e98c2d6fa5c66ab5a45e5606028">◆ </a></span>operator=()</h2>
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<td class="memname"><a class="el" href="classCDense__diag.html">CDense_diag</a>& CDense_diag::operator= </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCDense__diag.html">CDense_diag</a> & </td>
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<h2 class="memtitle"><span class="permalink"><a href="#ad1e5d3151e5a7018ef2ebd5b2abe740d">◆ </a></span>Validate()</h2>
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<td class="memname">void CDense_diag::Validate </td>
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<p class="definition">Definition at line <a class="el" href="Dense__diag_8cpp_source.html#l00058">58</a> of file <a class="el" href="Dense__diag_8cpp_source.html">Dense_diag.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Dense__diag_8hpp_source.html#l00125">CheckNumRows()</a>, <a class="el" href="Dense__diag___8hpp_source.html#l00507">CDense_diag_Base::GetStrands()</a>, and <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>.</p>
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<p class="reference">Referenced by <a class="el" href="aln__generators_8cpp_source.html#l00224">CreateDense_diagFromAnchoredAln()</a>.</p>
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<hr/>The documentation for this class was generated from the following files:<ul>
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<li>include/objects/seqalign/<a class="el" href="Dense__diag_8hpp_source.html">Dense_diag.hpp</a></li>
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<li>src/objects/seqalign/<a class="el" href="Dense__diag_8cpp_source.html">Dense_diag.cpp</a></li>
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<address style="align: right;"><small>Modified on Fri Sep 20 14:58:32 2024 by modify_doxy.py rev. 669887</small></address>
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