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543 lines
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<a href="#pub-methods">Public Member Functions</a> |
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<a href="#pri-methods">Private Member Functions</a> |
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<div class="title">CBlast4_queries Class Reference</div> </div>
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<p>
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<a class="el" href = "https://www.ncbi.nlm.nih.gov/toolkitbookgh/?term=CBlast4_queries">Search Toolkit Book for <i>CBlast4_queries</i></a>
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<p><code>#include <<a class="el" href="Blast4__queries_8hpp_source.html">objects/blast/Blast4_queries.hpp</a>></code></p>
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<img id="dynsection-0-trigger" src="closed.png" alt="+"/> Inheritance diagram for CBlast4_queries:</div>
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<div class="center"><img src="img__inherit__graph/classCBlast4__queries__inherit__graph.png" border="0" usemap="#aCBlast4__queries_inherit__map" alt="Inheritance graph"/></div>
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<map name="aCBlast4__queries_inherit__map" id="aCBlast4__queries_inherit__map">
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<area shape="rect" title=" " alt="" coords="23,304,142,331"/>
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<area shape="rect" href="classCBlast4__queries__Base.html" title="If a PSSM is used (ie." alt="" coords="5,229,160,256"/>
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<img id="dynsection-1-trigger" src="closed.png" alt="+"/> Collaboration diagram for CBlast4_queries:</div>
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<div class="center"><img src="img__coll__graph/classCBlast4__queries__coll__graph.png" border="0" usemap="#aCBlast4__queries_coll__map" alt="Collaboration graph"/></div>
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<map name="aCBlast4__queries_coll__map" id="aCBlast4__queries_coll__map">
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr class="memitem:a0d20c93e8b3bce154d726b0edbb31811"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBlast4__queries.html#a0d20c93e8b3bce154d726b0edbb31811">CBlast4_queries</a> (void)</td></tr>
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<tr class="separator:a0d20c93e8b3bce154d726b0edbb31811"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a2de623d14d7a60e167e78fb16dc918b5"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBlast4__queries.html#a2de623d14d7a60e167e78fb16dc918b5">~CBlast4_queries</a> (void)</td></tr>
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<tr class="separator:a2de623d14d7a60e167e78fb16dc918b5"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a7db0a04bc4f95f98312e180040d42a20"><td class="memItemLeft" align="right" valign="top">size_t </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBlast4__queries.html#a7db0a04bc4f95f98312e180040d42a20">GetNumQueries</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:a7db0a04bc4f95f98312e180040d42a20"><td class="mdescLeft"> </td><td class="mdescRight">Retrieve the number of queries in this object. <a href="classCBlast4__queries.html#a7db0a04bc4f95f98312e180040d42a20">More...</a><br /></td></tr>
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<tr class="separator:a7db0a04bc4f95f98312e180040d42a20"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCBlast4__queries__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCBlast4__queries__Base')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCBlast4__queries__Base.html">CBlast4_queries_Base</a></td></tr>
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<tr class="memitem:ga4369df4356c85539df6fee728893a31d inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga4369df4356c85539df6fee728893a31d">CBlast4_queries_Base</a> (void)</td></tr>
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<tr class="separator:ga4369df4356c85539df6fee728893a31d inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga63fe4aca975f8ed8333f2fb9fe198765 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga63fe4aca975f8ed8333f2fb9fe198765">~CBlast4_queries_Base</a> (void)</td></tr>
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<tr class="separator:ga63fe4aca975f8ed8333f2fb9fe198765 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gac13f41f0e528a1e4cff8350b4e9f7d49 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gac13f41f0e528a1e4cff8350b4e9f7d49">DECLARE_INTERNAL_TYPE_INFO</a> ()</td></tr>
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<tr class="separator:gac13f41f0e528a1e4cff8350b4e9f7d49 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab23dbac0363ff70ec7227a33f5fe8592 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gab23dbac0363ff70ec7227a33f5fe8592">Reset</a> (void)</td></tr>
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<tr class="memdesc:gab23dbac0363ff70ec7227a33f5fe8592 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset the whole object. <a href="group__dataspec__NCBI__Blast4.html#gab23dbac0363ff70ec7227a33f5fe8592">More...</a><br /></td></tr>
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<tr class="separator:gab23dbac0363ff70ec7227a33f5fe8592 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad9d9fd88255845c1d406b5c7e2032cd4 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gad9d9fd88255845c1d406b5c7e2032cd4">ResetSelection</a> (void)</td></tr>
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<tr class="memdesc:gad9d9fd88255845c1d406b5c7e2032cd4 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset the selection (set it to e_not_set). <a href="group__dataspec__NCBI__Blast4.html#gad9d9fd88255845c1d406b5c7e2032cd4">More...</a><br /></td></tr>
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<tr class="separator:gad9d9fd88255845c1d406b5c7e2032cd4 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga541b37b25eb7a3b22d41045a45721610 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga541b37b25eb7a3b22d41045a45721610">Which</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga541b37b25eb7a3b22d41045a45721610 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Which variant is currently selected. <a href="group__dataspec__NCBI__Blast4.html#ga541b37b25eb7a3b22d41045a45721610">More...</a><br /></td></tr>
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<tr class="separator:ga541b37b25eb7a3b22d41045a45721610 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga34e84397a64a9bb439f73fb9f2f45955 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga34e84397a64a9bb439f73fb9f2f45955">CheckSelected</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga34e84397a64a9bb439f73fb9f2f45955 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Verify selection, throw exception if it differs from the expected. <a href="group__dataspec__NCBI__Blast4.html#ga34e84397a64a9bb439f73fb9f2f45955">More...</a><br /></td></tr>
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<tr class="separator:ga34e84397a64a9bb439f73fb9f2f45955 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad37b0e4db710ef276a329464dd8fab7c inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gad37b0e4db710ef276a329464dd8fab7c">ThrowInvalidSelection</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gad37b0e4db710ef276a329464dd8fab7c inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Throw 'InvalidSelection' exception. <a href="group__dataspec__NCBI__Blast4.html#gad37b0e4db710ef276a329464dd8fab7c">More...</a><br /></td></tr>
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<tr class="separator:gad37b0e4db710ef276a329464dd8fab7c inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga9801c8d7042cda9307e6980535709971 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga9801c8d7042cda9307e6980535709971">Select</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> index, <a class="el" href="group__GenClassSupport.html#ga7c6a1c466f2038d9c701334252e2ac91">EResetVariant</a> reset=<a class="el" href="group__GenClassSupport.html#gga7c6a1c466f2038d9c701334252e2ac91a2b52bf0dd0543d7d6bc95de9d25cf804">eDoResetVariant</a>)</td></tr>
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<tr class="memdesc:ga9801c8d7042cda9307e6980535709971 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the requested variant if needed. <a href="group__dataspec__NCBI__Blast4.html#ga9801c8d7042cda9307e6980535709971">More...</a><br /></td></tr>
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<tr class="separator:ga9801c8d7042cda9307e6980535709971 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga1cb5d1222aa3f94d5cc216adbcbda7cc inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga1cb5d1222aa3f94d5cc216adbcbda7cc">Select</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> index, <a class="el" href="group__GenClassSupport.html#ga7c6a1c466f2038d9c701334252e2ac91">EResetVariant</a> reset, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *pool)</td></tr>
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<tr class="memdesc:ga1cb5d1222aa3f94d5cc216adbcbda7cc inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the requested variant if needed, allocating <a class="el" href="classCObject.html" title="CObject –.">CObject</a> variants from memory pool. <a href="group__dataspec__NCBI__Blast4.html#ga1cb5d1222aa3f94d5cc216adbcbda7cc">More...</a><br /></td></tr>
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<tr class="separator:ga1cb5d1222aa3f94d5cc216adbcbda7cc inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5c36a01447b0a323b74bfca0dafd29ed inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga5c36a01447b0a323b74bfca0dafd29ed">IsPssm</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga5c36a01447b0a323b74bfca0dafd29ed inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if variant Pssm is selected. <a href="group__dataspec__NCBI__Blast4.html#ga5c36a01447b0a323b74bfca0dafd29ed">More...</a><br /></td></tr>
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<tr class="separator:ga5c36a01447b0a323b74bfca0dafd29ed inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaa5f6dbebc702b995e0381be43d248857 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Blast4.html#gaaf165aa65421a44072c5c2991b6674e4">TPssm</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gaa5f6dbebc702b995e0381be43d248857">GetPssm</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gaa5f6dbebc702b995e0381be43d248857 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the variant data. <a href="group__dataspec__NCBI__Blast4.html#gaa5f6dbebc702b995e0381be43d248857">More...</a><br /></td></tr>
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<tr class="separator:gaa5f6dbebc702b995e0381be43d248857 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae54d574c7fdbdc81bbffc33f1ccdbd7f inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Blast4.html#gaaf165aa65421a44072c5c2991b6674e4">TPssm</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gae54d574c7fdbdc81bbffc33f1ccdbd7f">SetPssm</a> (void)</td></tr>
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<tr class="memdesc:gae54d574c7fdbdc81bbffc33f1ccdbd7f inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the variant. <a href="group__dataspec__NCBI__Blast4.html#gae54d574c7fdbdc81bbffc33f1ccdbd7f">More...</a><br /></td></tr>
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<tr class="separator:gae54d574c7fdbdc81bbffc33f1ccdbd7f inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga27cb0454f1104b59ce45488230786b21 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga27cb0454f1104b59ce45488230786b21">SetPssm</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#gaaf165aa65421a44072c5c2991b6674e4">TPssm</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga27cb0454f1104b59ce45488230786b21 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the variant and set its data. <a href="group__dataspec__NCBI__Blast4.html#ga27cb0454f1104b59ce45488230786b21">More...</a><br /></td></tr>
|
||
<tr class="separator:ga27cb0454f1104b59ce45488230786b21 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga0e4682329d748d7046c0a3b70f554b0b inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga0e4682329d748d7046c0a3b70f554b0b">IsSeq_loc_list</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga0e4682329d748d7046c0a3b70f554b0b inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if variant Seq_loc_list is selected. <a href="group__dataspec__NCBI__Blast4.html#ga0e4682329d748d7046c0a3b70f554b0b">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0e4682329d748d7046c0a3b70f554b0b inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga8a6391a822b5a2408c969b93d051489d inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Blast4.html#ga71b61393a64d1967ce7f521f599b147e">TSeq_loc_list</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga8a6391a822b5a2408c969b93d051489d">GetSeq_loc_list</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga8a6391a822b5a2408c969b93d051489d inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the variant data. <a href="group__dataspec__NCBI__Blast4.html#ga8a6391a822b5a2408c969b93d051489d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga8a6391a822b5a2408c969b93d051489d inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6c6f7cd8580f520fa650ee4599958504 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga71b61393a64d1967ce7f521f599b147e">TSeq_loc_list</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga6c6f7cd8580f520fa650ee4599958504">SetSeq_loc_list</a> (void)</td></tr>
|
||
<tr class="memdesc:ga6c6f7cd8580f520fa650ee4599958504 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the variant. <a href="group__dataspec__NCBI__Blast4.html#ga6c6f7cd8580f520fa650ee4599958504">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6c6f7cd8580f520fa650ee4599958504 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga89c7ee2e556aef303be043f476014509 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga89c7ee2e556aef303be043f476014509">IsBioseq_set</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga89c7ee2e556aef303be043f476014509 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if variant Bioseq_set is selected. <a href="group__dataspec__NCBI__Blast4.html#ga89c7ee2e556aef303be043f476014509">More...</a><br /></td></tr>
|
||
<tr class="separator:ga89c7ee2e556aef303be043f476014509 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga7f601a09d941ef2f523f820ea9d00af8 inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__Blast4.html#ga26b5d8771c639a3ac380fc3c9141f3a9">TBioseq_set</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga7f601a09d941ef2f523f820ea9d00af8">GetBioseq_set</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7f601a09d941ef2f523f820ea9d00af8 inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the variant data. <a href="group__dataspec__NCBI__Blast4.html#ga7f601a09d941ef2f523f820ea9d00af8">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7f601a09d941ef2f523f820ea9d00af8 inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga8533cbfa0eb3a407ac25277f3ce142fc inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga26b5d8771c639a3ac380fc3c9141f3a9">TBioseq_set</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga8533cbfa0eb3a407ac25277f3ce142fc">SetBioseq_set</a> (void)</td></tr>
|
||
<tr class="memdesc:ga8533cbfa0eb3a407ac25277f3ce142fc inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the variant. <a href="group__dataspec__NCBI__Blast4.html#ga8533cbfa0eb3a407ac25277f3ce142fc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga8533cbfa0eb3a407ac25277f3ce142fc inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga945d19de2926599fb7965b8ff9f7c73e inherit pub_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga945d19de2926599fb7965b8ff9f7c73e">SetBioseq_set</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#ga26b5d8771c639a3ac380fc3c9141f3a9">TBioseq_set</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga945d19de2926599fb7965b8ff9f7c73e inherit pub_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Select the variant and set its data. <a href="group__dataspec__NCBI__Blast4.html#ga945d19de2926599fb7965b8ff9f7c73e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga945d19de2926599fb7965b8ff9f7c73e inherit pub_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga8575b1015c4a4f3336b6e1c0a4324b71">CSerialObject</a> (void)</td></tr>
|
||
<tr class="separator:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gaf278b96157abad20b5d944fb83d32fb1">~CSerialObject</a> (void)</td></tr>
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<tr class="separator:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCTypeInfo.html">CTypeInfo</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacb5d8a2e6878e58aeaeaf342081f0b7f">GetThisTypeInfo</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> =0</td></tr>
|
||
<tr class="separator:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">Assign</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &source, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>)</td></tr>
|
||
<tr class="memdesc:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Set object to copy of another one. <a href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">Equals</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &object, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if both objects contain the same values. <a href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">More...</a><br /></td></tr>
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||
<tr class="separator:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">DebugDump</a> (<a class="el" href="classCDebugDumpContext.html">CDebugDumpContext</a> ddc, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method for dumping debug information. <a href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">More...</a><br /></td></tr>
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||
<tr class="separator:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga7382b4cd30306d9444f85abd912ff61e">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab5506012856f3627d88368a24e1eb254">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char *<a class="el" href="dbapi__sample__base_8hpp.html#a8334353b550f5c3b6d2ea57d716ab2e2">file_name</a>, <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> file_line) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="separator:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">HasNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object data type has namespace name. <a href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">GetNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace name. <a href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">More...</a><br /></td></tr>
|
||
<tr class="separator:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">HasNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if data type has namespace prefix. <a href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">More...</a><br /></td></tr>
|
||
<tr class="separator:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">GetNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace prefix. <a href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">More...</a><br /></td></tr>
|
||
<tr class="separator:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">More...</a><br /></td></tr>
|
||
<tr class="separator:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">CObject</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src)</td></tr>
|
||
<tr class="memdesc:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">More...</a><br /></td></tr>
|
||
<tr class="separator:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">~CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCObject.html">CObject</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src) <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">More...</a><br /></td></tr>
|
||
<tr class="separator:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">CanBeDeleted</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object can be deleted. <a href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">More...</a><br /></td></tr>
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||
<tr class="separator:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">IsAllocatedInPool</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is allocated in memory pool (not system heap) <a href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">Referenced</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced. <a href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">ReferencedOnlyOnce</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced only once. <a href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">More...</a><br /></td></tr>
|
||
<tr class="separator:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">AddReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Add reference to object. <a href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">RemoveReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference to object. <a href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">More...</a><br /></td></tr>
|
||
<tr class="separator:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">ReleaseReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference without deleting object. <a href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">DoNotDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as not allocated in heap – do not delete this object. <a href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">More...</a><br /></td></tr>
|
||
<tr class="separator:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">DoDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as allocated in heap – object can be deleted. <a href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator for memory allocation. <a href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">operator new[]</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new[] operator for 'array' memory allocation. <a href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">More...</a><br /></td></tr>
|
||
<tr class="separator:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">operator delete</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator for memory deallocation. <a href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">More...</a><br /></td></tr>
|
||
<tr class="separator:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">operator delete[]</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete[] operator for memory deallocation. <a href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, void *place)</td></tr>
|
||
<tr class="memdesc:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator. <a href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">operator delete</a> (void *ptr, void *place)</td></tr>
|
||
<tr class="memdesc:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">More...</a><br /></td></tr>
|
||
<tr class="separator:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator using memory pool. <a href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">operator delete</a> (void *ptr, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
|
||
<tr class="memdesc:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
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||
<tr class="memitem:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ae8723856215191ef748f19ff73e8ba4e">CDebugDumpable</a> (void)</td></tr>
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||
<tr class="separator:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#acdeaaedfabb4cc4a64108dbb854f4b51">~CDebugDumpable</a> (void)</td></tr>
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||
<tr class="separator:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a4ff9ec248a38f17b7d8deb3f78318a37">DebugDumpText</a> (ostream &<a class="el" href="events__unit__test_8cpp.html#ac3c18c078fe416626b6c1dcc3e780245">out</a>, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#aa0101dfdc0ae0cbd0cb1609c96f96229">DebugDumpFormat</a> (<a class="el" href="classCDebugDumpFormatter.html">CDebugDumpFormatter</a> &ddf, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a19047c92521e5f3ad2a14bab26a49b51">DumpToConsole</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-types"></a>
|
||
Private Types</h2></td></tr>
|
||
<tr class="memitem:a8d71d5c129c55de1860ff3b873913fea"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCBlast4__queries__Base.html">CBlast4_queries_Base</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBlast4__queries.html#a8d71d5c129c55de1860ff3b873913fea">Tparent</a></td></tr>
|
||
<tr class="separator:a8d71d5c129c55de1860ff3b873913fea"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
|
||
Private Member Functions</h2></td></tr>
|
||
<tr class="memitem:af5653d65fbdbec6d9863cc198965d48e"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBlast4__queries.html#af5653d65fbdbec6d9863cc198965d48e">CBlast4_queries</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBlast4__queries.html">CBlast4_queries</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:af5653d65fbdbec6d9863cc198965d48e"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:a32249caeec482b6dabd4278514756423"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCBlast4__queries.html">CBlast4_queries</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBlast4__queries.html#a32249caeec482b6dabd4278514756423">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBlast4__queries.html">CBlast4_queries</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="separator:a32249caeec482b6dabd4278514756423"><td class="memSeparator" colspan="2"> </td></tr>
|
||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
|
||
Additional Inherited Members</h2></td></tr>
|
||
<tr class="inherit_header pub_types_classCBlast4__queries__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCBlast4__queries__Base')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCBlast4__queries__Base.html">CBlast4_queries_Base</a></td></tr>
|
||
<tr class="memitem:gac083b34a29751f3ec3a3372536963f4d inherit pub_types_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> { <a class="el" href="group__dataspec__NCBI__Blast4.html#ggac083b34a29751f3ec3a3372536963f4da03e90b344cbe5802b5d0bea132a19a19">e_not_set</a> = 0
|
||
, <a class="el" href="group__dataspec__NCBI__Blast4.html#ggac083b34a29751f3ec3a3372536963f4da8464ebac94bbbee800f32a3445e4691c">e_Pssm</a>
|
||
, <a class="el" href="group__dataspec__NCBI__Blast4.html#ggac083b34a29751f3ec3a3372536963f4da56e06ce52753cfc9811c93f72f44c454">e_Seq_loc_list</a>
|
||
, <a class="el" href="group__dataspec__NCBI__Blast4.html#ggac083b34a29751f3ec3a3372536963f4da91666abbf6ba65eda858e5eca2fc0996">e_Bioseq_set</a>
|
||
}</td></tr>
|
||
<tr class="memdesc:gac083b34a29751f3ec3a3372536963f4d"><td class="mdescLeft"> </td><td class="mdescRight">Choice variants. <a href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">More...</a><br /></td></tr>
|
||
<tr class="separator:gac083b34a29751f3ec3a3372536963f4d inherit pub_types_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga91939cd7baaf08a8cdb3dc4cb0c81bb3 inherit pub_types_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga91939cd7baaf08a8cdb3dc4cb0c81bb3">E_ChoiceStopper</a> { <a class="el" href="group__dataspec__NCBI__Blast4.html#gga91939cd7baaf08a8cdb3dc4cb0c81bb3a32cb3d087a16bf3adafc6f011c897c7a">e_MaxChoice</a> = 4
|
||
}</td></tr>
|
||
<tr class="memdesc:ga91939cd7baaf08a8cdb3dc4cb0c81bb3"><td class="mdescLeft"> </td><td class="mdescRight">Maximum+1 value of the choice variant enumerator. <a href="group__dataspec__NCBI__Blast4.html#ga91939cd7baaf08a8cdb3dc4cb0c81bb3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga91939cd7baaf08a8cdb3dc4cb0c81bb3 inherit pub_types_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaaf165aa65421a44072c5c2991b6674e4 inherit pub_types_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCPssmWithParameters.html">CPssmWithParameters</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gaaf165aa65421a44072c5c2991b6674e4">TPssm</a></td></tr>
|
||
<tr class="separator:gaaf165aa65421a44072c5c2991b6674e4 inherit pub_types_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga71b61393a64d1967ce7f521f599b147e inherit pub_types_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">typedef list< <a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSeq__loc.html">CSeq_loc</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga71b61393a64d1967ce7f521f599b147e">TSeq_loc_list</a></td></tr>
|
||
<tr class="separator:ga71b61393a64d1967ce7f521f599b147e inherit pub_types_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga26b5d8771c639a3ac380fc3c9141f3a9 inherit pub_types_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCBioseq__set.html">CBioseq_set</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#ga26b5d8771c639a3ac380fc3c9141f3a9">TBioseq_set</a></td></tr>
|
||
<tr class="separator:ga26b5d8771c639a3ac380fc3c9141f3a9 inherit pub_types_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_types_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCObject')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> { <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca2b8c59f649cc88eeb7eaeba939e2838d">eAllocFillNone</a> = 1
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca336d7ff658b673c2e8fe3aed9b155f04">eAllocFillZero</a>
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588ccab3631bf1c36b77f950d94372290deb76">eAllocFillPattern</a>
|
||
}</td></tr>
|
||
<tr class="memdesc:ga3cf5f3ac0aef32c4aab1fa66513588cc"><td class="mdescLeft"> </td><td class="mdescRight">Control filling of newly allocated memory. <a href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCObjectCounterLocker.html">CObjectCounterLocker</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">TLockerType</a></td></tr>
|
||
<tr class="memdesc:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Default locker type for <a class="el" href="classCRef.html" title="CRef –.">CRef</a>. <a href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef atomic< <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">TCounter</a></td></tr>
|
||
<tr class="memdesc:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Counter type is CAtomiCounter. <a href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">More...</a><br /></td></tr>
|
||
<tr class="separator:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a></td></tr>
|
||
<tr class="memdesc:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Alias for value type of counter. <a href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCBlast4__queries__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCBlast4__queries__Base')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCBlast4__queries__Base.html">CBlast4_queries_Base</a></td></tr>
|
||
<tr class="memitem:gaa91d65892f6b0c72e48de055373bf7a5 inherit pub_static_methods_classCBlast4__queries__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__Blast4.html#gaa91d65892f6b0c72e48de055373bf7a5">SelectionName</a> (<a class="el" href="group__dataspec__NCBI__Blast4.html#gac083b34a29751f3ec3a3372536963f4d">E_Choice</a> index)</td></tr>
|
||
<tr class="memdesc:gaa91d65892f6b0c72e48de055373bf7a5 inherit pub_static_methods_classCBlast4__queries__Base"><td class="mdescLeft"> </td><td class="mdescRight">Retrieve selection name (for diagnostic purposes). <a href="group__dataspec__NCBI__Blast4.html#gaa91d65892f6b0c72e48de055373bf7a5">More...</a><br /></td></tr>
|
||
<tr class="separator:gaa91d65892f6b0c72e48de055373bf7a5 inherit pub_static_methods_classCBlast4__queries__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab2a92c7a5b5900317294b85e854db07e">SetVerifyDataThread</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga2e3bead397d7ec0fffde866cd890267e">SetVerifyDataGlobal</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
|
||
<tr class="separator:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gada3dbb83951d0bed9bde06c6c4ede9e2">UnassignedString</a> (void)</td></tr>
|
||
<tr class="separator:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__STL.html#ga88e22aab83a29bae20f5354e89b041e3">CStringUTF8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga123d82fb69550b6418ad5d69e752873a">UnassignedStringUTF8</a> (void)</td></tr>
|
||
<tr class="separator:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga1d897c6ce0f541df2487600cedd9f40a">UnassignedByte</a> (void)</td></tr>
|
||
<tr class="separator:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_static_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">ThrowNullPointerException</a> (void)</td></tr>
|
||
<tr class="memdesc:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method to throw null pointer exception. <a href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">More...</a><br /></td></tr>
|
||
<tr class="separator:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae042a181e665dd40945c1c1a7a6bc5d1">ThrowNullPointerException</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> type_info &<a class="el" href="structtype.html">type</a>)</td></tr>
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||
<tr class="separator:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga4b6f1beef2a1f37c68f7f3b1aac471d8">GetAllocFillMode</a> (void)</td></tr>
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||
<tr class="separator:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga42eceef165a83cc081837a373ab6dd67">SetAllocFillMode</a> (<a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> <a class="el" href="mdb__load_8c.html#a1ea5d0cb93f22f7d0fdf804bd68c3326">mode</a>)</td></tr>
|
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<tr class="separator:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">SetAllocFillMode</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Set mode from configuration parameter value. <a href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">More...</a><br /></td></tr>
|
||
<tr class="separator:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_static_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
|
||
<tr class="memitem:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ab6ba54280c562230f65733cca0560c83">EnableDebugDump</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> on)</td></tr>
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||
<tr class="separator:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_static_attribs_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
|
||
<tr class="memitem:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacf732f6a9f64037d0cad32a72f7522ea">ms_UnassignedStr</a> = "<*unassigned*>"</td></tr>
|
||
<tr class="separator:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6baaf827f8d2e4f98be84d91d511a716">ms_UnassignedByte</a> = char(0xcd)</td></tr>
|
||
<tr class="separator:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_static_attribs_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">eCounterBitsCanBeDeleted</a> = 1 << 0</td></tr>
|
||
<tr class="memdesc:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define possible object states. <a href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">eCounterBitsInPlainHeap</a> = 1 << 1</td></tr>
|
||
<tr class="memdesc:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Heap signature was found. <a href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">More...</a><br /></td></tr>
|
||
<tr class="separator:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">eCounterBitsPlaceMask</a></td></tr>
|
||
<tr class="memdesc:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mask for 'in heap' state flags. <a href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">More...</a><br /></td></tr>
|
||
<tr class="separator:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">eCounterStep</a> = 1 << 2</td></tr>
|
||
<tr class="memdesc:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Skip over the "in heap" bits. <a href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">eCounterValid</a> = <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>(1) << (sizeof(<a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>) * 8 - 2)</td></tr>
|
||
<tr class="memdesc:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Minimal value for valid objects (reference counter is zero) Must be a single bit value. <a href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">More...</a><br /></td></tr>
|
||
<tr class="separator:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">eCounterStateMask</a></td></tr>
|
||
<tr class="memdesc:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Valid object, and object in heap. <a href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">More...</a><br /></td></tr>
|
||
<tr class="separator:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pro_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classCObject')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">DeleteThis</a> (void)</td></tr>
|
||
<tr class="memdesc:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Virtual method "deleting" this object. <a href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
</table>
|
||
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
|
||
<div class="textblock">
|
||
<p class="definition">Definition at line <a class="el" href="Blast4__queries_8hpp_source.html#l00053">53</a> of file <a class="el" href="Blast4__queries_8hpp_source.html">Blast4_queries.hpp</a>.</p>
|
||
</div><h2 class="groupheader">Member Typedef Documentation</h2>
|
||
<a id="a8d71d5c129c55de1860ff3b873913fea"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#a8d71d5c129c55de1860ff3b873913fea">◆ </a></span>Tparent</h2>
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||
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||
<div class="memitem">
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||
<div class="memproto">
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||
<table class="mlabels">
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||
<tr>
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||
<td class="mlabels-left">
|
||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">typedef <a class="el" href="classCBlast4__queries__Base.html">CBlast4_queries_Base</a> <a class="el" href="classCBlast4__queries.html#a8d71d5c129c55de1860ff3b873913fea">CBlast4_queries::Tparent</a></td>
|
||
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|
||
</table>
|
||
</td>
|
||
<td class="mlabels-right">
|
||
<span class="mlabels"><span class="mlabel">private</span></span> </td>
|
||
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|
||
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||
</div><div class="memdoc">
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||
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||
<p class="definition">Definition at line <a class="el" href="Blast4__queries_8hpp_source.html#l00055">55</a> of file <a class="el" href="Blast4__queries_8hpp_source.html">Blast4_queries.hpp</a>.</p>
|
||
|
||
</div>
|
||
</div>
|
||
<h2 class="groupheader">Constructor & Destructor Documentation</h2>
|
||
<a id="a0d20c93e8b3bce154d726b0edbb31811"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#a0d20c93e8b3bce154d726b0edbb31811">◆ </a></span>CBlast4_queries() <span class="overload">[1/2]</span></h2>
|
||
|
||
<div class="memitem">
|
||
<div class="memproto">
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||
<table class="mlabels">
|
||
<tr>
|
||
<td class="mlabels-left">
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||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">CBlast4_queries::CBlast4_queries </td>
|
||
<td>(</td>
|
||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
|
||
<td></td>
|
||
</tr>
|
||
</table>
|
||
</td>
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||
<td class="mlabels-right">
|
||
<span class="mlabels"><span class="mlabel">inline</span></span> </td>
|
||
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|
||
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|
||
</div><div class="memdoc">
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|
||
<p class="definition">Definition at line <a class="el" href="Blast4__queries_8hpp_source.html#l00076">76</a> of file <a class="el" href="Blast4__queries_8hpp_source.html">Blast4_queries.hpp</a>.</p>
|
||
|
||
</div>
|
||
</div>
|
||
<a id="a2de623d14d7a60e167e78fb16dc918b5"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#a2de623d14d7a60e167e78fb16dc918b5">◆ </a></span>~CBlast4_queries()</h2>
|
||
|
||
<div class="memitem">
|
||
<div class="memproto">
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||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">CBlast4_queries::~CBlast4_queries </td>
|
||
<td>(</td>
|
||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
|
||
<td></td>
|
||
</tr>
|
||
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|
||
</div><div class="memdoc">
|
||
|
||
<p class="definition">Definition at line <a class="el" href="Blast4__queries_8cpp_source.html#l00052">52</a> of file <a class="el" href="Blast4__queries_8cpp_source.html">Blast4_queries.cpp</a>.</p>
|
||
|
||
</div>
|
||
</div>
|
||
<a id="af5653d65fbdbec6d9863cc198965d48e"></a>
|
||
<h2 class="memtitle"><span class="permalink"><a href="#af5653d65fbdbec6d9863cc198965d48e">◆ </a></span>CBlast4_queries() <span class="overload">[2/2]</span></h2>
|
||
|
||
<div class="memitem">
|
||
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|
||
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|
||
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|
||
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||
<table class="memname">
|
||
<tr>
|
||
<td class="memname">CBlast4_queries::CBlast4_queries </td>
|
||
<td>(</td>
|
||
<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBlast4__queries.html">CBlast4_queries</a> & </td>
|
||
<td class="paramname"><em>value</em></td><td>)</td>
|
||
<td></td>
|
||
</tr>
|
||
</table>
|
||
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|
||
<td class="mlabels-right">
|
||
<span class="mlabels"><span class="mlabel">private</span></span> </td>
|
||
</tr>
|
||
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<h2 class="groupheader">Member Function Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a7db0a04bc4f95f98312e180040d42a20">◆ </a></span>GetNumQueries()</h2>
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<td class="memname">size_t CBlast4_queries::GetNumQueries </td>
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<td>(</td>
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<p>Retrieve the number of queries in this object. </p>
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<p class="definition">Definition at line <a class="el" href="Blast4__queries_8cpp_source.html#l00057">57</a> of file <a class="el" href="Blast4__queries_8cpp_source.html">Blast4_queries.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Blast4__queries___8hpp_source.html#l00102">CBlast4_queries_Base::e_Bioseq_set</a>, <a class="el" href="Blast4__queries___8hpp_source.html#l00099">CBlast4_queries_Base::e_not_set</a>, <a class="el" href="Blast4__queries___8hpp_source.html#l00100">CBlast4_queries_Base::e_Pssm</a>, <a class="el" href="Blast4__queries___8hpp_source.html#l00101">CBlast4_queries_Base::e_Seq_loc_list</a>, <a class="el" href="Blast4__queries___8cpp_source.html#l00132">CBlast4_queries_Base::GetBioseq_set()</a>, <a class="el" href="Blast4__queries___8hpp_source.html#l00306">CBlast4_queries_Base::GetSeq_loc_list()</a>, <a class="el" href="Bioseq__set___8hpp_source.html#l00756">CBioseq_set_Base::GetSeq_set()</a>, and <a class="el" href="Blast4__queries___8hpp_source.html#l00265">CBlast4_queries_Base::Which()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="prj__helper_8cpp_source.html#l00105">CGBProjectHelper::AddProjectItemsFromRID()</a>, <a class="el" href="remote__blast__unit__test_8cpp_source.html#l01138">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="blast__formatter_8cpp_source.html#l00188">CBlastFormatterApp::x_ExtractQueries()</a>, <a class="el" href="blast__formatter__vdb_8cpp_source.html#l00186">CBlastFormatterVdbApp::x_ExtractQueries()</a>, and <a class="el" href="remote__blast_8cpp_source.html#l02090">CRemoteBlast::x_ExtractQueryIds()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a32249caeec482b6dabd4278514756423">◆ </a></span>operator=()</h2>
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<td class="memname"><a class="el" href="classCBlast4__queries.html">CBlast4_queries</a>& CBlast4_queries::operator= </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBlast4__queries.html">CBlast4_queries</a> & </td>
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<hr/>The documentation for this class was generated from the following files:<ul>
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<li>include/objects/blast/<a class="el" href="Blast4__queries_8hpp_source.html">Blast4_queries.hpp</a></li>
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<li>src/objects/blast/<a class="el" href="Blast4__queries_8cpp_source.html">Blast4_queries.cpp</a></li>
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<address style="align: right;"><small>Modified on Fri Sep 20 14:58:21 2024 by modify_doxy.py rev. 669887</small></address>
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