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291 KiB
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2496 lines
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<meta name="generator" content="Doxygen 1.9.0"/>
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<title>NCBI C++ ToolKit: CBioSource Class Reference</title>
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<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
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<div id="titlearea">
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<table cellspacing="0" cellpadding="0">
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<tbody>
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<tr style="height: 56px;">
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<td id="projectalign" style="padding-left: 0.5em;">
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<div id="projectname">NCBI C++ ToolKit
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</div>
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</td>
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</tr>
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/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&dn=gpl-2.0.txt GPL-v2 */
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$(function() {
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initMenu('',true,true,'/toolkit/','Search');
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/* @license-end */</script>
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<div id="main-nav"></div>
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</div><!-- top -->
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<div class="header">
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<div class="summary">
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<a href="#pub-types">Public Types</a> |
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<a href="#pub-methods">Public Member Functions</a> |
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<a href="#pub-static-methods">Static Public Member Functions</a> |
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<a href="#pri-types">Private Types</a> |
|
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<a href="#pri-methods">Private Member Functions</a> |
|
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<a href="#pri-static-methods">Static Private Member Functions</a> |
|
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<a href="classCBioSource-members.html">List of all members</a> </div>
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<div class="headertitle">
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<div class="title">CBioSource Class Reference</div> </div>
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</div><!--header-->
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<div class="contents">
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<p>
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<a class="el" href = "https://www.ncbi.nlm.nih.gov/toolkitbookgh/?term=CBioSource">Search Toolkit Book for <i>CBioSource</i></a>
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</p>
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<p><code>#include <<a class="el" href="BioSource_8hpp_source.html">objects/seqfeat/BioSource.hpp</a>></code></p>
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<div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
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<img id="dynsection-0-trigger" src="closed.png" alt="+"/> Inheritance diagram for CBioSource:</div>
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<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
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</div>
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<div id="dynsection-0-content" class="dyncontent" style="display:none;">
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<div class="center"><img src="img__inherit__graph/classCBioSource__inherit__graph.png" border="0" usemap="#aCBioSource_inherit__map" alt="Inheritance graph"/></div>
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<map name="aCBioSource_inherit__map" id="aCBioSource_inherit__map">
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<area shape="rect" title=" " alt="" coords="24,304,116,331"/>
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<area shape="rect" href="classCBioSource__Base.html" title="********************************************************************" alt="" coords="5,229,135,256"/>
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||
<area shape="rect" href="classCSerialObject.html" title="Base class for all serializable objects." alt="" coords="19,155,121,181"/>
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<area shape="rect" href="classCObject.html" title="CObject –." alt="" coords="35,80,105,107"/>
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<area shape="rect" href="classCDebugDumpable.html" title=" " alt="" coords="5,5,135,32"/>
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</map>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
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<div id="dynsection-1" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
|
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<img id="dynsection-1-trigger" src="closed.png" alt="+"/> Collaboration diagram for CBioSource:</div>
|
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<div id="dynsection-1-summary" class="dynsummary" style="display:block;">
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</div>
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<div id="dynsection-1-content" class="dyncontent" style="display:none;">
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<div class="center"><img src="img__coll__graph/classCBioSource__coll__graph.png" border="0" usemap="#aCBioSource_coll__map" alt="Collaboration graph"/></div>
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<map name="aCBioSource_coll__map" id="aCBioSource_coll__map">
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<area shape="rect" title=" " alt="" coords="193,544,285,571"/>
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<area shape="rect" href="classCBioSource__Base.html" title="********************************************************************" alt="" coords="175,468,304,495"/>
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<area shape="rect" href="classCSerialObject.html" title="Base class for all serializable objects." alt="" coords="19,379,121,405"/>
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<area shape="rect" href="classCObject.html" title="CObject –." alt="" coords="35,289,105,316"/>
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<area shape="rect" href="classCDebugDumpable.html" title=" " alt="" coords="5,193,135,219"/>
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<area shape="rect" href="classCRef.html" title=" " alt="" coords="145,379,333,405"/>
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<area shape="rect" href="classpair__base__member.html" title=" " alt="" coords="285,185,463,227"/>
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<area shape="rect" href="classCRef.html" title="CRef –." alt="" coords="307,289,441,316"/>
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</map>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-types"></a>
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Public Types</h2></td></tr>
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<tr class="memitem:a37808275f66f57282471a0abe78acbc9"><td class="memItemLeft" align="right" valign="top">typedef pair< <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a>, <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a37808275f66f57282471a0abe78acbc9">TNameVal</a></td></tr>
|
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<tr class="separator:a37808275f66f57282471a0abe78acbc9"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a9b5a948b61cab056750a93db2ea0d584"><td class="memItemLeft" align="right" valign="top">typedef vector< <a class="el" href="classCBioSource.html#a37808275f66f57282471a0abe78acbc9">TNameVal</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">TNameValList</a></td></tr>
|
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<tr class="separator:a9b5a948b61cab056750a93db2ea0d584"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_types_classCBioSource__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCBioSource__Base')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCBioSource__Base.html">CBioSource_Base</a></td></tr>
|
||
<tr class="memitem:gae2ac4b91f2249f0563a61bea4ad4504b inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gae2ac4b91f2249f0563a61bea4ad4504b">EGenome</a> { <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba76df20c3aa99d10ed892f01759a6db74">eGenome_unknown</a> = 0
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba105761ee13ceee8d98f1b98aa80021da">eGenome_genomic</a> = 1
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba54c72100117088bab5f6bac7c1fe7a4a">eGenome_chloroplast</a> = 2
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504baeccd6242edbbe8df7bdd069176282b77">eGenome_chromoplast</a> = 3
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba12beb07138b911148102768b27d190c0">eGenome_kinetoplast</a> = 4
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba4653e9cdaa9c2aa1dd62e161acc4e7a6">eGenome_mitochondrion</a> = 5
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504bae3bc85c73293b47f9380a124ae278a62">eGenome_plastid</a> = 6
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504bafcfd9f089a437734f5a43e69ac8d2461">eGenome_macronuclear</a> = 7
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504baaab6947a5bd47a811267702a5402ee7d">eGenome_extrachrom</a> = 8
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504baa4753031c9fe1185b68eee362c13a3fb">eGenome_plasmid</a> = 9
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba2ff8564c7c8fe79f4ab31f561b1fc1f9">eGenome_transposon</a> = 10
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504bae74fa35540488799dd41b82977668b62">eGenome_insertion_seq</a> = 11
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504bae7495bd156af86ef8d92f3f7006373f9">eGenome_cyanelle</a> = 12
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba469beb22a53dc5b27207ba3146dff83c">eGenome_proviral</a> = 13
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba61299abdb477d90afed526d7d77e8949">eGenome_virion</a> = 14
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504baaf61ea30b6217680d472bc1cd2b64a0e">eGenome_nucleomorph</a> = 15
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba054de31f56bf6c77da9855a61c4678fb">eGenome_apicoplast</a> = 16
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504bafab8999602454dd244435789345ed0fa">eGenome_leucoplast</a> = 17
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba6a9299d932aa7627e590ea5540f924ec">eGenome_proplastid</a> = 18
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba4f4cee67da6dc09d3349fb6da706bbf8">eGenome_endogenous_virus</a> = 19
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba1379cb074ff1e220ef99c7068938844c">eGenome_hydrogenosome</a> = 20
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504bad96b1976ab4886738e98aaba83f4795f">eGenome_chromosome</a> = 21
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba312af583bb8f3244f71913c5bcb0a025">eGenome_chromatophore</a> = 22
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504ba7665cf26593ef85c00a1def43f234e74">eGenome_plasmid_in_mitochondrion</a> = 23
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggae2ac4b91f2249f0563a61bea4ad4504badf2c8e7c36d50f7ae836ae0feb5c4e1c">eGenome_plasmid_in_plastid</a> = 24
|
||
<br />
|
||
}</td></tr>
|
||
<tr class="memdesc:gae2ac4b91f2249f0563a61bea4ad4504b"><td class="mdescLeft"> </td><td class="mdescRight">biological context <a href="group__dataspec__NCBI__BioSource.html#gae2ac4b91f2249f0563a61bea4ad4504b">More...</a><br /></td></tr>
|
||
<tr class="separator:gae2ac4b91f2249f0563a61bea4ad4504b inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga946a969af73dc77c8ab3e311b6a13a41 inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga946a969af73dc77c8ab3e311b6a13a41">EOrigin</a> { <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41a06954aaa548375fd5846a8f135561312">eOrigin_unknown</a> = 0
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41aca790d693cb555c7953c92829d5e5364">eOrigin_natural</a> = 1
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41aa0e529ae964e1d2add929236d65a7136">eOrigin_natmut</a> = 2
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41a3b955c27944f5e6f6e98297366069504">eOrigin_mut</a> = 3
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41a9ef25186936774dd8ebbade07851ac14">eOrigin_artificial</a> = 4
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41a0dd0abd9502569892ce1784be944776c">eOrigin_synthetic</a> = 5
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#gga946a969af73dc77c8ab3e311b6a13a41af7b9e60c35ca5f9798a6b27db0704222">eOrigin_other</a> = 255
|
||
<br />
|
||
}</td></tr>
|
||
<tr class="separator:ga946a969af73dc77c8ab3e311b6a13a41 inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaadf2799dc69fe30469f48aee8ba3f37f inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">enum class  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gaadf2799dc69fe30469f48aee8ba3f37f">E_memberIndex</a> { <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fad2c4d82f7037e318e1aa6f58d06bd153">e__allMandatory</a> = 0
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fae5f2518a7d3606272b49cdcadba780c9">e_genome</a>
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fa4f3da30149ee722547b22e3e0467d4fc">e_origin</a>
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fa94cc7039e879e362c390469e9497f010">e_org</a>
|
||
, <br />
|
||
  <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fa627cccdfab1797c977c6a3c2cde33463">e_subtype</a>
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fa64b2359c720441b8bb16a9136a19049f">e_is_focus</a>
|
||
, <a class="el" href="group__dataspec__NCBI__BioSource.html#ggaadf2799dc69fe30469f48aee8ba3f37fa6732b0680cc30acec375533e712926ba">e_pcr_primers</a>
|
||
<br />
|
||
}</td></tr>
|
||
<tr class="separator:gaadf2799dc69fe30469f48aee8ba3f37f inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gabc0ef3a9feda3d2a99f129f2b20744f5 inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gabc0ef3a9feda3d2a99f129f2b20744f5">TGenome</a></td></tr>
|
||
<tr class="separator:gabc0ef3a9feda3d2a99f129f2b20744f5 inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga219cd6e16fc5e22a3421a1e12339cebd inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga219cd6e16fc5e22a3421a1e12339cebd">TOrigin</a></td></tr>
|
||
<tr class="separator:ga219cd6e16fc5e22a3421a1e12339cebd inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga49d14eaf0c19aa7c6acfa6ac3be265c4 inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCOrg__ref.html">COrg_ref</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga49d14eaf0c19aa7c6acfa6ac3be265c4">TOrg</a></td></tr>
|
||
<tr class="separator:ga49d14eaf0c19aa7c6acfa6ac3be265c4 inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga3174182e1e2ff90f275a18211297ff12 inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">typedef list< <a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCSubSource.html">CSubSource</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga3174182e1e2ff90f275a18211297ff12">TSubtype</a></td></tr>
|
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<tr class="separator:ga3174182e1e2ff90f275a18211297ff12 inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga312c07649d68f47989424bc97b9edaa4 inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCPCRReactionSet.html">CPCRReactionSet</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga312c07649d68f47989424bc97b9edaa4">TPcr_primers</a></td></tr>
|
||
<tr class="separator:ga312c07649d68f47989424bc97b9edaa4 inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gade20001e40b41214032b02fcfc75d519 inherit pub_types_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCSerialObject_1_1CMemberIndex.html">Tparent::CMemberIndex</a>< <a class="el" href="group__dataspec__NCBI__BioSource.html#gaadf2799dc69fe30469f48aee8ba3f37f">E_memberIndex</a>, 7 > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gade20001e40b41214032b02fcfc75d519">TmemberIndex</a></td></tr>
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||
<tr class="separator:gade20001e40b41214032b02fcfc75d519 inherit pub_types_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_types_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCObject')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> { <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca2b8c59f649cc88eeb7eaeba939e2838d">eAllocFillNone</a> = 1
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588cca336d7ff658b673c2e8fe3aed9b155f04">eAllocFillZero</a>
|
||
, <a class="el" href="group__Object.html#gga3cf5f3ac0aef32c4aab1fa66513588ccab3631bf1c36b77f950d94372290deb76">eAllocFillPattern</a>
|
||
}</td></tr>
|
||
<tr class="memdesc:ga3cf5f3ac0aef32c4aab1fa66513588cc"><td class="mdescLeft"> </td><td class="mdescRight">Control filling of newly allocated memory. <a href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga3cf5f3ac0aef32c4aab1fa66513588cc inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCObjectCounterLocker.html">CObjectCounterLocker</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">TLockerType</a></td></tr>
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||
<tr class="memdesc:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Default locker type for <a class="el" href="classCRef.html" title="CRef –.">CRef</a>. <a href="group__Object.html#ga2da943ea997324fcabb60e1a1ed1b71c">More...</a><br /></td></tr>
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<tr class="separator:ga2da943ea997324fcabb60e1a1ed1b71c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef atomic< <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">TCounter</a></td></tr>
|
||
<tr class="memdesc:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Counter type is CAtomiCounter. <a href="group__Object.html#gad6d6ac3cac6272609b70c101aaaeebf9">More...</a><br /></td></tr>
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||
<tr class="separator:gad6d6ac3cac6272609b70c101aaaeebf9 inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="group__Portability.html#gacb8f7ba15b8bac46f42c33b22099a6de">Uint8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a></td></tr>
|
||
<tr class="memdesc:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Alias for value type of counter. <a href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2e073b6c5b9c29648510bd99ebe00a5c inherit pub_types_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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||
Public Member Functions</h2></td></tr>
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||
<tr class="memitem:a6118b949c5729e9bfc230ffb6d55fda8"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a6118b949c5729e9bfc230ffb6d55fda8">CBioSource</a> (void)</td></tr>
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<tr class="separator:a6118b949c5729e9bfc230ffb6d55fda8"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ae5b1c70b73a79b0a66a181727b890cca"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ae5b1c70b73a79b0a66a181727b890cca">~CBioSource</a> (void)</td></tr>
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<tr class="separator:ae5b1c70b73a79b0a66a181727b890cca"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a5317f4eeae9d47f514eb91921c11c1a3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a5317f4eeae9d47f514eb91921c11c1a3">GetGenCode</a> (<a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> def=1) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a5317f4eeae9d47f514eb91921c11c1a3"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:acf6be240702bcda0c86f434d7f4be5b1"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#acf6be240702bcda0c86f434d7f4be5b1">IsSetTaxname</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:acf6be240702bcda0c86f434d7f4be5b1"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a0b31352fd2f660c1d6e6e335a979aca6"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a0b31352fd2f660c1d6e6e335a979aca6">GetTaxname</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="separator:a0b31352fd2f660c1d6e6e335a979aca6"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a098211cadae9fdde896732c298e14d65"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a098211cadae9fdde896732c298e14d65">IsSetCommon</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a098211cadae9fdde896732c298e14d65"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a69edd348fbd36971adb5a5e6a284ddd3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a69edd348fbd36971adb5a5e6a284ddd3">GetCommon</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a69edd348fbd36971adb5a5e6a284ddd3"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aa69676c8f17fc545e2c23342e44e616f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#aa69676c8f17fc545e2c23342e44e616f">IsSetLineage</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:aa69676c8f17fc545e2c23342e44e616f"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a013f4740cc9e22621bac9ea120391120"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a013f4740cc9e22621bac9ea120391120">GetLineage</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a013f4740cc9e22621bac9ea120391120"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a14a95b0ee3b6b951632cf9b4a335b859"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a14a95b0ee3b6b951632cf9b4a335b859">IsSetGcode</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a14a95b0ee3b6b951632cf9b4a335b859"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a51bbe7c11d970dffa9a1331f8110bac6"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a51bbe7c11d970dffa9a1331f8110bac6">GetGcode</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a51bbe7c11d970dffa9a1331f8110bac6"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a829633d278f81eb99f89ba4430976aeb"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a829633d278f81eb99f89ba4430976aeb">IsSetMgcode</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:abac8808b6311a3973fd4d0a0c988b58e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#abac8808b6311a3973fd4d0a0c988b58e">GetMgcode</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:abac8808b6311a3973fd4d0a0c988b58e"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ab4b4be1e709dda0727929add0c178067"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ab4b4be1e709dda0727929add0c178067">IsSetPgcode</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a3faa92551bb6dc029e2678e3a7515ef5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a3faa92551bb6dc029e2678e3a7515ef5">GetPgcode</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:ab679e7fa92a62242e6b814174a146037"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ab679e7fa92a62242e6b814174a146037">IsSetDivision</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a6d824f81278fd7239c430ba5ac1ba02d"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a6d824f81278fd7239c430ba5ac1ba02d">GetDivision</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a6d824f81278fd7239c430ba5ac1ba02d"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a8a8127af21d6df36c7e7b892094b2b1c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a8a8127af21d6df36c7e7b892094b2b1c">IsSetOrgname</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a8a8127af21d6df36c7e7b892094b2b1c"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a6b60eb5784bf66a77638f6763e87b9f5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCOrgName.html">COrgName</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a6b60eb5784bf66a77638f6763e87b9f5">GetOrgname</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a6b60eb5784bf66a77638f6763e87b9f5"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a2e64953854871e2f1d2d09ff984e460b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a2e64953854871e2f1d2d09ff984e460b">IsSetOrgMod</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a2e64953854871e2f1d2d09ff984e460b"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a15b16b1a1813ffe52c50c45a6faf6509"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a15b16b1a1813ffe52c50c45a6faf6509">GetRepliconName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a15b16b1a1813ffe52c50c45a6faf6509"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a8dd96664cdd085c3bae3e6035658ea95"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a8dd96664cdd085c3bae3e6035658ea95">GetBioprojectType</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a53f80a590ee5452bcff0819056ae266b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a53f80a590ee5452bcff0819056ae266b">GetBioprojectLocation</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:ac395911ec25f3988ef65f5ee3feb991a"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ac395911ec25f3988ef65f5ee3feb991a">SetDisableStrainForwarding</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:a35381f2f0e3dbef7f0b48b3ef7f35e0e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a35381f2f0e3dbef7f0b48b3ef7f35e0e">GetDisableStrainForwarding</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:ab690c2a2bf8b465236b461ff63aeb0aa"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ab690c2a2bf8b465236b461ff63aeb0aa">UpdateWithBioSample</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &biosample, <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> force, <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> is_local_copy=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a>)</td></tr>
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<tr class="memitem:ad84ab3eb7a3642296764e5bbf4fef841"><td class="memItemLeft" align="right" valign="top"><a class="el" href="BioSource_8hpp.html#aa8320d9b0ed42bb6fb41e74e64a2b0fd">TFieldDiffList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ad84ab3eb7a3642296764e5bbf4fef841">GetBiosampleDiffs</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &biosample, <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> is_local_copy=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a08037fd56a92053b605894781644ec62"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a08037fd56a92053b605894781644ec62">BiosampleDiffsOkForUpdate</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="BioSource_8hpp.html#aa8320d9b0ed42bb6fb41e74e64a2b0fd">TFieldDiffList</a> &diffs) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a2c93c67fed69fe12479fdac4154e348e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">TNameValList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a2c93c67fed69fe12479fdac4154e348e">GetNameValPairs</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a515d333550e78dd9031dfaadb6af192a"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a515d333550e78dd9031dfaadb6af192a">AutoFix</a> ()</td></tr>
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<tr class="memitem:a4281ae405d9f3d0629e83a120e0b549a"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a4281ae405d9f3d0629e83a120e0b549a">RemoveCultureNotes</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> is_species_level=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a41f9c5fb8b08eb5dc3edce4dcb37fee7">true</a>)</td></tr>
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<tr class="memitem:a0c4a6d2392458f07008bf79ee3788913"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a0c4a6d2392458f07008bf79ee3788913">RemoveLineageSourceNotes</a> ()</td></tr>
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<tr class="memitem:afa22c44b27a02b0b5f416042511d7e0e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#afa22c44b27a02b0b5f416042511d7e0e">RemoveSubSource</a> (<a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> subtype)</td></tr>
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<tr class="memitem:ae82ed6358a3b81d72e4584e06d4f39cc"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ae82ed6358a3b81d72e4584e06d4f39cc">RemoveSubSource</a> (<a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> subtype, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:a9b14df39d8eab2b7babf9a1b635584da"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a9b14df39d8eab2b7babf9a1b635584da">RemoveOrgMod</a> (<a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> subtype)</td></tr>
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<tr class="memitem:a87f05a67df982330afe655610ae28ba7"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a87f05a67df982330afe655610ae28ba7">RemoveOrgMod</a> (<a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> subtype, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>)</td></tr>
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<tr class="memitem:a1426583d74bec09112dcebc90902643e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a1426583d74bec09112dcebc90902643e">FixEnvironmentalSample</a> ()</td></tr>
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<tr class="memitem:a6a4fbbe9fff6a567175e98874e065d87"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a6a4fbbe9fff6a567175e98874e065d87">RemoveNullTerms</a> ()</td></tr>
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<tr class="memitem:ac14af937cad19373e54f03617b22b3c5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ac14af937cad19373e54f03617b22b3c5">AllowSexQualifier</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a013b3c4f1bcf0dce40b5befc47d137fa"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a013b3c4f1bcf0dce40b5befc47d137fa">AllowMatingTypeQualifier</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a55a7ae0f1e8076bbc840b71c784b5d96"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a55a7ae0f1e8076bbc840b71c784b5d96">FixSexMatingTypeInconsistencies</a> ()</td></tr>
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<tr class="memitem:add4f5c63e90716b7d48b5d9ce2571fac"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#add4f5c63e90716b7d48b5d9ce2571fac">RemoveUnexpectedViralQualifiers</a> ()</td></tr>
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<tr class="memitem:a775bce02efa076b8d6b0de3a3dd77704"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a775bce02efa076b8d6b0de3a3dd77704">FixGenomeForQualifiers</a> ()</td></tr>
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<tr class="memitem:a8815d82fa2a6dc89bb973925ef24504d"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a8815d82fa2a6dc89bb973925ef24504d">IsViral</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a7f6e8c9c37fd2d28ac709446ad9b8b8f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a7f6e8c9c37fd2d28ac709446ad9b8b8f">HasSubtype</a> (<a class="el" href="group__dataspec__NCBI__BioSource.html#ga1cec6ad346c14140cd52b5eb5262cbb3">CSubSource::TSubtype</a> subtype) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a6f5592e6b8103b956487e142d64f2744"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCBioSource.html">CBioSource</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a6f5592e6b8103b956487e142d64f2744">MakeCommon</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &other) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a288243e3fb20173a06d7a963a4c72ad0"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCBioSource.html">CBioSource</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a288243e3fb20173a06d7a963a4c72ad0">MakeCommonExceptOrg</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &other) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="inherit_header pub_methods_classCBioSource__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCBioSource__Base')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCBioSource__Base.html">CBioSource_Base</a></td></tr>
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<tr class="memitem:ga796cdee06535edeafc95a44085444950 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga796cdee06535edeafc95a44085444950">CBioSource_Base</a> (void)</td></tr>
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<tr class="memitem:ga02a15b6f432b14eb8868debf0fddaef7 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga02a15b6f432b14eb8868debf0fddaef7">~CBioSource_Base</a> (void)</td></tr>
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<tr class="memitem:ga374de37d6c951b105ff9e20a2dedd9fd inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga374de37d6c951b105ff9e20a2dedd9fd">DECLARE_INTERNAL_TYPE_INFO</a> ()</td></tr>
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<tr class="memitem:ga82584b1fbd3a83d463dca341054d57b1 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga82584b1fbd3a83d463dca341054d57b1">IsSetGenome</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga82584b1fbd3a83d463dca341054d57b1 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Genome data member. <a href="group__dataspec__NCBI__BioSource.html#ga82584b1fbd3a83d463dca341054d57b1">More...</a><br /></td></tr>
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<tr class="memitem:ga50f399696aa03deb5b0760f9443e4351 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga50f399696aa03deb5b0760f9443e4351">CanGetGenome</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga50f399696aa03deb5b0760f9443e4351 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetGenome method. <a href="group__dataspec__NCBI__BioSource.html#ga50f399696aa03deb5b0760f9443e4351">More...</a><br /></td></tr>
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<tr class="memitem:ga1847b38875dbc39fb6bc585cb6477007 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga1847b38875dbc39fb6bc585cb6477007">ResetGenome</a> (void)</td></tr>
|
||
<tr class="memdesc:ga1847b38875dbc39fb6bc585cb6477007 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Genome data member. <a href="group__dataspec__NCBI__BioSource.html#ga1847b38875dbc39fb6bc585cb6477007">More...</a><br /></td></tr>
|
||
<tr class="separator:ga1847b38875dbc39fb6bc585cb6477007 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gad7a77cc657e0ae381811a3ffd64bc587 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gad7a77cc657e0ae381811a3ffd64bc587">SetDefaultGenome</a> (void)</td></tr>
|
||
<tr class="memdesc:gad7a77cc657e0ae381811a3ffd64bc587 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign default value to Genome data member. <a href="group__dataspec__NCBI__BioSource.html#gad7a77cc657e0ae381811a3ffd64bc587">More...</a><br /></td></tr>
|
||
<tr class="separator:gad7a77cc657e0ae381811a3ffd64bc587 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga0c7d4f8daa656332feb841fa8f6c6c97 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#gabc0ef3a9feda3d2a99f129f2b20744f5">TGenome</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga0c7d4f8daa656332feb841fa8f6c6c97">GetGenome</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga0c7d4f8daa656332feb841fa8f6c6c97 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Genome member data. <a href="group__dataspec__NCBI__BioSource.html#ga0c7d4f8daa656332feb841fa8f6c6c97">More...</a><br /></td></tr>
|
||
<tr class="separator:ga0c7d4f8daa656332feb841fa8f6c6c97 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga6ae2dfecd57f3829dbf9709e0c60bb40 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga6ae2dfecd57f3829dbf9709e0c60bb40">SetGenome</a> (<a class="el" href="group__dataspec__NCBI__BioSource.html#gabc0ef3a9feda3d2a99f129f2b20744f5">TGenome</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga6ae2dfecd57f3829dbf9709e0c60bb40 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Genome data member. <a href="group__dataspec__NCBI__BioSource.html#ga6ae2dfecd57f3829dbf9709e0c60bb40">More...</a><br /></td></tr>
|
||
<tr class="separator:ga6ae2dfecd57f3829dbf9709e0c60bb40 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga4496f97fe40fe58badf5387352beb27e inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#gabc0ef3a9feda3d2a99f129f2b20744f5">TGenome</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga4496f97fe40fe58badf5387352beb27e">SetGenome</a> (void)</td></tr>
|
||
<tr class="memdesc:ga4496f97fe40fe58badf5387352beb27e inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Genome data member. <a href="group__dataspec__NCBI__BioSource.html#ga4496f97fe40fe58badf5387352beb27e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga4496f97fe40fe58badf5387352beb27e inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga64e156ec443ce880ca0700065d258dee inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga64e156ec443ce880ca0700065d258dee">IsSetOrigin</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga64e156ec443ce880ca0700065d258dee inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Origin data member. <a href="group__dataspec__NCBI__BioSource.html#ga64e156ec443ce880ca0700065d258dee">More...</a><br /></td></tr>
|
||
<tr class="separator:ga64e156ec443ce880ca0700065d258dee inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5c4ac3d025b5e95c66629e2cb961f9ae inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga5c4ac3d025b5e95c66629e2cb961f9ae">CanGetOrigin</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5c4ac3d025b5e95c66629e2cb961f9ae inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetOrigin method. <a href="group__dataspec__NCBI__BioSource.html#ga5c4ac3d025b5e95c66629e2cb961f9ae">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5c4ac3d025b5e95c66629e2cb961f9ae inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga188050ef621747182f92a01bd901a2f8 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga188050ef621747182f92a01bd901a2f8">ResetOrigin</a> (void)</td></tr>
|
||
<tr class="memdesc:ga188050ef621747182f92a01bd901a2f8 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Origin data member. <a href="group__dataspec__NCBI__BioSource.html#ga188050ef621747182f92a01bd901a2f8">More...</a><br /></td></tr>
|
||
<tr class="separator:ga188050ef621747182f92a01bd901a2f8 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gabf92525b3d32f0a44f194afb99681b84 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gabf92525b3d32f0a44f194afb99681b84">SetDefaultOrigin</a> (void)</td></tr>
|
||
<tr class="memdesc:gabf92525b3d32f0a44f194afb99681b84 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign default value to Origin data member. <a href="group__dataspec__NCBI__BioSource.html#gabf92525b3d32f0a44f194afb99681b84">More...</a><br /></td></tr>
|
||
<tr class="separator:gabf92525b3d32f0a44f194afb99681b84 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga12751347efd6449665ca8b435ed07346 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga219cd6e16fc5e22a3421a1e12339cebd">TOrigin</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga12751347efd6449665ca8b435ed07346">GetOrigin</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga12751347efd6449665ca8b435ed07346 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Origin member data. <a href="group__dataspec__NCBI__BioSource.html#ga12751347efd6449665ca8b435ed07346">More...</a><br /></td></tr>
|
||
<tr class="separator:ga12751347efd6449665ca8b435ed07346 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga50e0c5390ebab9e4aeaf1b255f4d3308 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga50e0c5390ebab9e4aeaf1b255f4d3308">SetOrigin</a> (<a class="el" href="group__dataspec__NCBI__BioSource.html#ga219cd6e16fc5e22a3421a1e12339cebd">TOrigin</a> <a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga50e0c5390ebab9e4aeaf1b255f4d3308 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Origin data member. <a href="group__dataspec__NCBI__BioSource.html#ga50e0c5390ebab9e4aeaf1b255f4d3308">More...</a><br /></td></tr>
|
||
<tr class="separator:ga50e0c5390ebab9e4aeaf1b255f4d3308 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gadda70b1e77a8cd0d4bb5722949f54944 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga219cd6e16fc5e22a3421a1e12339cebd">TOrigin</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gadda70b1e77a8cd0d4bb5722949f54944">SetOrigin</a> (void)</td></tr>
|
||
<tr class="memdesc:gadda70b1e77a8cd0d4bb5722949f54944 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Origin data member. <a href="group__dataspec__NCBI__BioSource.html#gadda70b1e77a8cd0d4bb5722949f54944">More...</a><br /></td></tr>
|
||
<tr class="separator:gadda70b1e77a8cd0d4bb5722949f54944 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2ca928f0d6bd7bbadd693a601e6cc762 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga2ca928f0d6bd7bbadd693a601e6cc762">IsSetOrg</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga2ca928f0d6bd7bbadd693a601e6cc762 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Org data member. <a href="group__dataspec__NCBI__BioSource.html#ga2ca928f0d6bd7bbadd693a601e6cc762">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2ca928f0d6bd7bbadd693a601e6cc762 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2fb537f731ebccf20dc9d42289939b6c inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga2fb537f731ebccf20dc9d42289939b6c">CanGetOrg</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga2fb537f731ebccf20dc9d42289939b6c inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetOrg method. <a href="group__dataspec__NCBI__BioSource.html#ga2fb537f731ebccf20dc9d42289939b6c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2fb537f731ebccf20dc9d42289939b6c inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga9d20b3cc4864aabb502f9d6f2d7ac69e inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga9d20b3cc4864aabb502f9d6f2d7ac69e">ResetOrg</a> (void)</td></tr>
|
||
<tr class="memdesc:ga9d20b3cc4864aabb502f9d6f2d7ac69e inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Org data member. <a href="group__dataspec__NCBI__BioSource.html#ga9d20b3cc4864aabb502f9d6f2d7ac69e">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9d20b3cc4864aabb502f9d6f2d7ac69e inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5ee2620387be3e7972404091b9823efe inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__BioSource.html#ga49d14eaf0c19aa7c6acfa6ac3be265c4">TOrg</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga5ee2620387be3e7972404091b9823efe">GetOrg</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5ee2620387be3e7972404091b9823efe inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Org member data. <a href="group__dataspec__NCBI__BioSource.html#ga5ee2620387be3e7972404091b9823efe">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5ee2620387be3e7972404091b9823efe inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gab110abf7d7e72086d9efaaa451637eea inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gab110abf7d7e72086d9efaaa451637eea">SetOrg</a> (<a class="el" href="group__dataspec__NCBI__BioSource.html#ga49d14eaf0c19aa7c6acfa6ac3be265c4">TOrg</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:gab110abf7d7e72086d9efaaa451637eea inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Org data member. <a href="group__dataspec__NCBI__BioSource.html#gab110abf7d7e72086d9efaaa451637eea">More...</a><br /></td></tr>
|
||
<tr class="separator:gab110abf7d7e72086d9efaaa451637eea inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga69c969b561c7a03d6ddf23eae8aa03d4 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga49d14eaf0c19aa7c6acfa6ac3be265c4">TOrg</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga69c969b561c7a03d6ddf23eae8aa03d4">SetOrg</a> (void)</td></tr>
|
||
<tr class="memdesc:ga69c969b561c7a03d6ddf23eae8aa03d4 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Org data member. <a href="group__dataspec__NCBI__BioSource.html#ga69c969b561c7a03d6ddf23eae8aa03d4">More...</a><br /></td></tr>
|
||
<tr class="separator:ga69c969b561c7a03d6ddf23eae8aa03d4 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga377728bee378bfd3ba44bb93707d000c inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga377728bee378bfd3ba44bb93707d000c">IsSetSubtype</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga377728bee378bfd3ba44bb93707d000c inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Subtype data member. <a href="group__dataspec__NCBI__BioSource.html#ga377728bee378bfd3ba44bb93707d000c">More...</a><br /></td></tr>
|
||
<tr class="separator:ga377728bee378bfd3ba44bb93707d000c inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga2744cd69a8f3b83cb3fa6f13a91efccc inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga2744cd69a8f3b83cb3fa6f13a91efccc">CanGetSubtype</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga2744cd69a8f3b83cb3fa6f13a91efccc inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetSubtype method. <a href="group__dataspec__NCBI__BioSource.html#ga2744cd69a8f3b83cb3fa6f13a91efccc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga2744cd69a8f3b83cb3fa6f13a91efccc inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gafc55fb59d29af16aa09d7cdceba813f9 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gafc55fb59d29af16aa09d7cdceba813f9">ResetSubtype</a> (void)</td></tr>
|
||
<tr class="memdesc:gafc55fb59d29af16aa09d7cdceba813f9 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Subtype data member. <a href="group__dataspec__NCBI__BioSource.html#gafc55fb59d29af16aa09d7cdceba813f9">More...</a><br /></td></tr>
|
||
<tr class="separator:gafc55fb59d29af16aa09d7cdceba813f9 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga01f532fdeb023535fbb530a2b5aae8f5 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__BioSource.html#ga3174182e1e2ff90f275a18211297ff12">TSubtype</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga01f532fdeb023535fbb530a2b5aae8f5">GetSubtype</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga01f532fdeb023535fbb530a2b5aae8f5 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Subtype member data. <a href="group__dataspec__NCBI__BioSource.html#ga01f532fdeb023535fbb530a2b5aae8f5">More...</a><br /></td></tr>
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<tr class="separator:ga01f532fdeb023535fbb530a2b5aae8f5 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaec42d9628f09dd6f4aaf906549ffab67 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga3174182e1e2ff90f275a18211297ff12">TSubtype</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gaec42d9628f09dd6f4aaf906549ffab67">SetSubtype</a> (void)</td></tr>
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<tr class="memdesc:gaec42d9628f09dd6f4aaf906549ffab67 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Subtype data member. <a href="group__dataspec__NCBI__BioSource.html#gaec42d9628f09dd6f4aaf906549ffab67">More...</a><br /></td></tr>
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||
<tr class="separator:gaec42d9628f09dd6f4aaf906549ffab67 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gad27c45754759e3204ba02d3382e81fa9 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gad27c45754759e3204ba02d3382e81fa9">IsSetIs_focus</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gad27c45754759e3204ba02d3382e81fa9 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">to distinguish biological focus <a class="el" href="structCheck.html">Check</a> if a value has been assigned to Is_focus data member. <a href="group__dataspec__NCBI__BioSource.html#gad27c45754759e3204ba02d3382e81fa9">More...</a><br /></td></tr>
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<tr class="separator:gad27c45754759e3204ba02d3382e81fa9 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6c13d1637b93692e975006645cbb8fbc inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga6c13d1637b93692e975006645cbb8fbc">CanGetIs_focus</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga6c13d1637b93692e975006645cbb8fbc inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if value of Is_focus member is getatable. <a href="group__dataspec__NCBI__BioSource.html#ga6c13d1637b93692e975006645cbb8fbc">More...</a><br /></td></tr>
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<tr class="separator:ga6c13d1637b93692e975006645cbb8fbc inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4d6f6d543725aec3f60894aef670e01c inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga4d6f6d543725aec3f60894aef670e01c">ResetIs_focus</a> (void)</td></tr>
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<tr class="memdesc:ga4d6f6d543725aec3f60894aef670e01c inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Is_focus data member. <a href="group__dataspec__NCBI__BioSource.html#ga4d6f6d543725aec3f60894aef670e01c">More...</a><br /></td></tr>
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||
<tr class="separator:ga4d6f6d543725aec3f60894aef670e01c inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga49670a5a0ee8da1fd5e7328555851e23 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga49670a5a0ee8da1fd5e7328555851e23">SetIs_focus</a> (void)</td></tr>
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||
<tr class="memdesc:ga49670a5a0ee8da1fd5e7328555851e23 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Set NULL data member (assign 'NULL' value to Is_focus data member). <a href="group__dataspec__NCBI__BioSource.html#ga49670a5a0ee8da1fd5e7328555851e23">More...</a><br /></td></tr>
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||
<tr class="separator:ga49670a5a0ee8da1fd5e7328555851e23 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga477c610aca1d4a2b422170ae4ea44c4f inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga477c610aca1d4a2b422170ae4ea44c4f">IsSetPcr_primers</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga477c610aca1d4a2b422170ae4ea44c4f inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if a value has been assigned to Pcr_primers data member. <a href="group__dataspec__NCBI__BioSource.html#ga477c610aca1d4a2b422170ae4ea44c4f">More...</a><br /></td></tr>
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<tr class="separator:ga477c610aca1d4a2b422170ae4ea44c4f inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6bd2b2213abe15fb337b1c6ade49af82 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga6bd2b2213abe15fb337b1c6ade49af82">CanGetPcr_primers</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga6bd2b2213abe15fb337b1c6ade49af82 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if it is safe to call GetPcr_primers method. <a href="group__dataspec__NCBI__BioSource.html#ga6bd2b2213abe15fb337b1c6ade49af82">More...</a><br /></td></tr>
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<tr class="separator:ga6bd2b2213abe15fb337b1c6ade49af82 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaeff67cab38ab30074620c9252778acdc inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gaeff67cab38ab30074620c9252778acdc">ResetPcr_primers</a> (void)</td></tr>
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||
<tr class="memdesc:gaeff67cab38ab30074620c9252778acdc inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset Pcr_primers data member. <a href="group__dataspec__NCBI__BioSource.html#gaeff67cab38ab30074620c9252778acdc">More...</a><br /></td></tr>
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<tr class="separator:gaeff67cab38ab30074620c9252778acdc inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga09f5f58450646ff0f1b7d5c1593f1508 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__dataspec__NCBI__BioSource.html#ga312c07649d68f47989424bc97b9edaa4">TPcr_primers</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga09f5f58450646ff0f1b7d5c1593f1508">GetPcr_primers</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="memdesc:ga09f5f58450646ff0f1b7d5c1593f1508 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Get the Pcr_primers member data. <a href="group__dataspec__NCBI__BioSource.html#ga09f5f58450646ff0f1b7d5c1593f1508">More...</a><br /></td></tr>
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<tr class="separator:ga09f5f58450646ff0f1b7d5c1593f1508 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaa1f02de0097b2132407b468c081b84da inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#gaa1f02de0097b2132407b468c081b84da">SetPcr_primers</a> (<a class="el" href="group__dataspec__NCBI__BioSource.html#ga312c07649d68f47989424bc97b9edaa4">TPcr_primers</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="memdesc:gaa1f02de0097b2132407b468c081b84da inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Pcr_primers data member. <a href="group__dataspec__NCBI__BioSource.html#gaa1f02de0097b2132407b468c081b84da">More...</a><br /></td></tr>
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<tr class="separator:gaa1f02de0097b2132407b468c081b84da inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5232e34b41dd732d19d5c0723474bc8b inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga312c07649d68f47989424bc97b9edaa4">TPcr_primers</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga5232e34b41dd732d19d5c0723474bc8b">SetPcr_primers</a> (void)</td></tr>
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<tr class="memdesc:ga5232e34b41dd732d19d5c0723474bc8b inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Assign a value to Pcr_primers data member. <a href="group__dataspec__NCBI__BioSource.html#ga5232e34b41dd732d19d5c0723474bc8b">More...</a><br /></td></tr>
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<tr class="separator:ga5232e34b41dd732d19d5c0723474bc8b inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4953e3d652168e0af9bcd7b89300fe65 inherit pub_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga4953e3d652168e0af9bcd7b89300fe65">Reset</a> (void)</td></tr>
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<tr class="memdesc:ga4953e3d652168e0af9bcd7b89300fe65 inherit pub_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Reset the whole object. <a href="group__dataspec__NCBI__BioSource.html#ga4953e3d652168e0af9bcd7b89300fe65">More...</a><br /></td></tr>
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<tr class="separator:ga4953e3d652168e0af9bcd7b89300fe65 inherit pub_methods_classCBioSource__Base"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
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<tr class="memitem:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga8575b1015c4a4f3336b6e1c0a4324b71">CSerialObject</a> (void)</td></tr>
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<tr class="separator:ga8575b1015c4a4f3336b6e1c0a4324b71 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gaf278b96157abad20b5d944fb83d32fb1">~CSerialObject</a> (void)</td></tr>
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<tr class="separator:gaf278b96157abad20b5d944fb83d32fb1 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCTypeInfo.html">CTypeInfo</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacb5d8a2e6878e58aeaeaf342081f0b7f">GetThisTypeInfo</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> =0</td></tr>
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<tr class="separator:gacb5d8a2e6878e58aeaeaf342081f0b7f inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">Assign</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &source, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>)</td></tr>
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<tr class="memdesc:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Set object to copy of another one. <a href="group__GenClassSupport.html#ga6c7f903717f7a272091acf5124cfd903">More...</a><br /></td></tr>
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<tr class="separator:ga6c7f903717f7a272091acf5124cfd903 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">Equals</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCSerialObject.html">CSerialObject</a> &object, <a class="el" href="group__GenClassSupport.html#ga059327d78b8d9e780d720f141674f241">ESerialRecursionMode</a> how=<a class="el" href="group__GenClassSupport.html#gga059327d78b8d9e780d720f141674f241abe759672df31c77b76afeea2cd4c0db7">eRecursive</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if both objects contain the same values. <a href="group__GenClassSupport.html#gae694abd95a4753598c398540f3467d99">More...</a><br /></td></tr>
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<tr class="separator:gae694abd95a4753598c398540f3467d99 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">DebugDump</a> (<a class="el" href="classCDebugDumpContext.html">CDebugDumpContext</a> ddc, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memdesc:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method for dumping debug information. <a href="group__GenClassSupport.html#ga0daf4906b8f2e6382118c4a018491761">More...</a><br /></td></tr>
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<tr class="separator:ga0daf4906b8f2e6382118c4a018491761 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga7382b4cd30306d9444f85abd912ff61e">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:ga7382b4cd30306d9444f85abd912ff61e inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab5506012856f3627d88368a24e1eb254">ThrowUnassigned</a> (<a class="el" href="group__GenClassSupport.html#ga4045c609bd35431331d0055309404111">TMemberIndex</a> index, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char *<a class="el" href="dbapi__sample__base_8hpp.html#a8334353b550f5c3b6d2ea57d716ab2e2">file_name</a>, <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> file_line) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:gab5506012856f3627d88368a24e1eb254 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">HasNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object data type has namespace name. <a href="group__GenClassSupport.html#ga937551d0a9c61c7ff537ac19ec37904d">More...</a><br /></td></tr>
|
||
<tr class="separator:ga937551d0a9c61c7ff537ac19ec37904d inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">GetNamespaceName</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace name. <a href="group__GenClassSupport.html#ga901688404844d3c9be43320e1d51c485">More...</a><br /></td></tr>
|
||
<tr class="separator:ga901688404844d3c9be43320e1d51c485 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">HasNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if data type has namespace prefix. <a href="group__GenClassSupport.html#gacfc7e87713da36496323f5477db80219">More...</a><br /></td></tr>
|
||
<tr class="separator:gacfc7e87713da36496323f5477db80219 inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">GetNamespacePrefix</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="mdescLeft"> </td><td class="mdescRight">Get namespace prefix. <a href="group__GenClassSupport.html#gae8fa62abf96f3ed3cec903dce6a6a33a">More...</a><br /></td></tr>
|
||
<tr class="separator:gae8fa62abf96f3ed3cec903dce6a6a33a inherit pub_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="inherit_header pub_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCObject')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
|
||
<tr class="memitem:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="group__Object.html#gae38a8715a230c7ed588993c0206d8cb4">More...</a><br /></td></tr>
|
||
<tr class="separator:gae38a8715a230c7ed588993c0206d8cb4 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">CObject</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src)</td></tr>
|
||
<tr class="memdesc:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="group__Object.html#gae89833a29aad16e7cb252314d2e7f4ab">More...</a><br /></td></tr>
|
||
<tr class="separator:gae89833a29aad16e7cb252314d2e7f4ab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">~CObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="group__Object.html#ga5125d96ff932bcd471a734fd174b2022">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5125d96ff932bcd471a734fd174b2022 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCObject.html">CObject</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCObject.html">CObject</a> &src) <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="group__Object.html#gab2090742c0465c4229f6e0b57c2de566">More...</a><br /></td></tr>
|
||
<tr class="separator:gab2090742c0465c4229f6e0b57c2de566 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">CanBeDeleted</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object can be deleted. <a href="group__Object.html#gaad370ec0ee157f6082b9845338cb2809">More...</a><br /></td></tr>
|
||
<tr class="separator:gaad370ec0ee157f6082b9845338cb2809 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">IsAllocatedInPool</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is allocated in memory pool (not system heap) <a href="group__Object.html#gaf5cddacd7194af14e759f3d89325679b">More...</a><br /></td></tr>
|
||
<tr class="separator:gaf5cddacd7194af14e759f3d89325679b inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">Referenced</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced. <a href="group__Object.html#ga9f9bbe6d075c90238a43585999d303d9">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9f9bbe6d075c90238a43585999d303d9 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">ReferencedOnlyOnce</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Exception.html#ga8b97bb3687e603604470b18da8e56e91">THROWS_NONE</a></td></tr>
|
||
<tr class="memdesc:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structCheck.html">Check</a> if object is referenced only once. <a href="group__Object.html#gaac3600b16f957a209f857aff7f79bf91">More...</a><br /></td></tr>
|
||
<tr class="separator:gaac3600b16f957a209f857aff7f79bf91 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">AddReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Add reference to object. <a href="group__Object.html#ga7161c8a13b08e627baa2ea0d75d679dc">More...</a><br /></td></tr>
|
||
<tr class="separator:ga7161c8a13b08e627baa2ea0d75d679dc inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">RemoveReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference to object. <a href="group__Object.html#ga827e9544b3a20642fcb736160f203bab">More...</a><br /></td></tr>
|
||
<tr class="separator:ga827e9544b3a20642fcb736160f203bab inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">ReleaseReference</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="memdesc:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Remove reference without deleting object. <a href="group__Object.html#ga5f08a74874b48c0e4a3d8e54343d4c90">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5f08a74874b48c0e4a3d8e54343d4c90 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">DoNotDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as not allocated in heap – do not delete this object. <a href="group__Object.html#ga52d3bc7d4f90411a190da81d7fd8d931">More...</a><br /></td></tr>
|
||
<tr class="separator:ga52d3bc7d4f90411a190da81d7fd8d931 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">DoDeleteThisObject</a> (void)</td></tr>
|
||
<tr class="memdesc:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mark this object as allocated in heap – object can be deleted. <a href="group__Object.html#ga35fd00918a29221f823c8e8d5d67fee2">More...</a><br /></td></tr>
|
||
<tr class="separator:ga35fd00918a29221f823c8e8d5d67fee2 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator for memory allocation. <a href="group__Object.html#ga9a8f931b70ac3730f364ad6078580424">More...</a><br /></td></tr>
|
||
<tr class="separator:ga9a8f931b70ac3730f364ad6078580424 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">operator new[]</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>)</td></tr>
|
||
<tr class="memdesc:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new[] operator for 'array' memory allocation. <a href="group__Object.html#gabb964e1c3096b1efe242a3c63bbb8120">More...</a><br /></td></tr>
|
||
<tr class="separator:gabb964e1c3096b1efe242a3c63bbb8120 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">operator delete</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator for memory deallocation. <a href="group__Object.html#gafde2770a20ee356b8a60cc81cca42366">More...</a><br /></td></tr>
|
||
<tr class="separator:gafde2770a20ee356b8a60cc81cca42366 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">operator delete[]</a> (void *ptr)</td></tr>
|
||
<tr class="memdesc:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete[] operator for memory deallocation. <a href="group__Object.html#ga5ea75357098dc7fea6cca8fb81620856">More...</a><br /></td></tr>
|
||
<tr class="separator:ga5ea75357098dc7fea6cca8fb81620856 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
|
||
<tr class="memitem:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, void *place)</td></tr>
|
||
<tr class="memdesc:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator. <a href="group__Object.html#ga37f436bf6f5a3d46b7363e104fccedf3">More...</a><br /></td></tr>
|
||
<tr class="separator:ga37f436bf6f5a3d46b7363e104fccedf3 inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">operator delete</a> (void *ptr, void *place)</td></tr>
|
||
<tr class="memdesc:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga54499c2fd0381ad8505bc120d5da84ff">More...</a><br /></td></tr>
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<tr class="separator:ga54499c2fd0381ad8505bc120d5da84ff inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">operator new</a> (size_t <a class="el" href="introspection__html_8hpp.html#ac27165163e7cf75ff278799c2eedf09a">size</a>, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
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<tr class="memdesc:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define new operator using memory pool. <a href="group__Object.html#ga981e7384172734070f47a3a9b53d0c3c">More...</a><br /></td></tr>
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<tr class="separator:ga981e7384172734070f47a3a9b53d0c3c inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">operator delete</a> (void *ptr, <a class="el" href="classCObjectMemoryPool.html">CObjectMemoryPool</a> *place)</td></tr>
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<tr class="memdesc:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define delete operator. <a href="group__Object.html#ga5c29219485b863e8a846c3076d321c7e">More...</a><br /></td></tr>
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<tr class="separator:ga5c29219485b863e8a846c3076d321c7e inherit pub_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
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<tr class="memitem:ae8723856215191ef748f19ff73e8ba4e inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ae8723856215191ef748f19ff73e8ba4e">CDebugDumpable</a> (void)</td></tr>
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<tr class="memitem:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#acdeaaedfabb4cc4a64108dbb854f4b51">~CDebugDumpable</a> (void)</td></tr>
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<tr class="separator:acdeaaedfabb4cc4a64108dbb854f4b51 inherit pub_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a4ff9ec248a38f17b7d8deb3f78318a37 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a4ff9ec248a38f17b7d8deb3f78318a37">DebugDumpText</a> (ostream &<a class="el" href="events__unit__test_8cpp.html#ac3c18c078fe416626b6c1dcc3e780245">out</a>, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:aa0101dfdc0ae0cbd0cb1609c96f96229 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#aa0101dfdc0ae0cbd0cb1609c96f96229">DebugDumpFormat</a> (<a class="el" href="classCDebugDumpFormatter.html">CDebugDumpFormatter</a> &ddf, <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &bundle, unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="ct__nlmzip__trees_8cpp.html#a431c74c4b26732a3a7de689109eb6b65">depth</a>) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="memitem:a19047c92521e5f3ad2a14bab26a49b51 inherit pub_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#a19047c92521e5f3ad2a14bab26a49b51">DumpToConsole</a> (void) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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</table><table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-static-methods"></a>
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Static Public Member Functions</h2></td></tr>
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<tr class="memitem:abc0ce3ba1abf8099740c3f1023638803"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__dataspec__NCBI__BioSource.html#gae2ac4b91f2249f0563a61bea4ad4504b">CBioSource::EGenome</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#abc0ce3ba1abf8099740c3f1023638803">GetGenomeByOrganelle</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &organelle, <a class="el" href="group__String.html#gad888eea21af8c5f8294d16def6f96fb2">NStr::ECase</a> use_case=<a class="el" href="group__String.html#ggad888eea21af8c5f8294d16def6f96fb2abb8c4e17d43fda080409383baca854ee">NStr::eCase</a>, <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> starts_with=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a>)</td></tr>
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<tr class="memitem:a315e37acceb354f5b6a7e12107a17c5e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a315e37acceb354f5b6a7e12107a17c5e">GetOrganelleByGenome</a> (unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> genome)</td></tr>
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<tr class="memitem:a7bee2b7db1fd7404c116b75cedbb9cb3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__dataspec__NCBI__BioSource.html#ga946a969af73dc77c8ab3e311b6a13a41">CBioSource::EOrigin</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a7bee2b7db1fd7404c116b75cedbb9cb3">GetOriginByString</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="opengl__renderer_8cpp.html#a24b090b94d0469a8f9e92db85120fe26">origin</a>, <a class="el" href="group__String.html#gad888eea21af8c5f8294d16def6f96fb2">NStr::ECase</a> use_case=<a class="el" href="group__String.html#ggad888eea21af8c5f8294d16def6f96fb2abb8c4e17d43fda080409383baca854ee">NStr::eCase</a>, <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> starts_with=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a>)</td></tr>
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<tr class="memitem:ac91366b830a22bca2af1632d705de1fd"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ac91366b830a22bca2af1632d705de1fd">GetStringFromOrigin</a> (unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> <a class="el" href="opengl__renderer_8cpp.html#a24b090b94d0469a8f9e92db85120fe26">origin</a>)</td></tr>
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<tr class="memitem:a2a57f0c4535034779427fc81ff7c01dc"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a2a57f0c4535034779427fc81ff7c01dc">ShouldIgnoreConflict</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="group__auth.html#ga430baa7a733a1418dd4283c85b0e1fe7">label</a>, <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> src_val, <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> sample_val, <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> is_local_copy=<a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a>)</td></tr>
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<tr class="memitem:a79927573bb80bbbca6fb0e1dd9662706"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a79927573bb80bbbca6fb0e1dd9662706">IsStopWord</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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<tr class="memitem:a2f6b3a96c218226631f67aabde255402"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a2f6b3a96c218226631f67aabde255402">AllowSexQualifier</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &lineage)</td></tr>
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<tr class="memitem:a700d092581c2cf564e6ff151b8cb4dc7"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a700d092581c2cf564e6ff151b8cb4dc7">AllowMatingTypeQualifier</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &lineage)</td></tr>
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<tr class="memitem:afdbe3474e6c1363046d9eb18dd446fa1"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#afdbe3474e6c1363046d9eb18dd446fa1">IsViral</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &lineage)</td></tr>
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<tr class="inherit_header pub_static_methods_classCBioSource__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCBioSource__Base')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCBioSource__Base.html">CBioSource_Base</a></td></tr>
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<tr class="memitem:ga8f29dca2393fcabcea924b5d1347d3d3 inherit pub_static_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> NCBI_NS_NCBI::CEnumeratedTypeValues *<a class="el" href="group__GenClassSupport.html#gaab9bc228ca2014a5451d4a8d47bee150">ENUM_METHOD_NAME</a>() </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga8f29dca2393fcabcea924b5d1347d3d3">EGenome</a> (void)</td></tr>
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<tr class="memdesc:ga8f29dca2393fcabcea924b5d1347d3d3 inherit pub_static_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Access to EGenome's attributes (values, names) as defined in spec. <a href="group__dataspec__NCBI__BioSource.html#ga8f29dca2393fcabcea924b5d1347d3d3">More...</a><br /></td></tr>
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<tr class="memitem:ga49958cd83a26f938e61898d840cf791a inherit pub_static_methods_classCBioSource__Base"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> NCBI_NS_NCBI::CEnumeratedTypeValues *<a class="el" href="group__GenClassSupport.html#gaab9bc228ca2014a5451d4a8d47bee150">ENUM_METHOD_NAME</a>() </td><td class="memItemRight" valign="bottom"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga49958cd83a26f938e61898d840cf791a">EOrigin</a> (void)</td></tr>
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<tr class="memdesc:ga49958cd83a26f938e61898d840cf791a inherit pub_static_methods_classCBioSource__Base"><td class="mdescLeft"> </td><td class="mdescRight">Access to EOrigin's attributes (values, names) as defined in spec. <a href="group__dataspec__NCBI__BioSource.html#ga49958cd83a26f938e61898d840cf791a">More...</a><br /></td></tr>
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<tr class="inherit_header pub_static_methods_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
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<tr class="memitem:gab2a92c7a5b5900317294b85e854db07e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gab2a92c7a5b5900317294b85e854db07e">SetVerifyDataThread</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
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<tr class="memitem:ga2e3bead397d7ec0fffde866cd890267e inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga2e3bead397d7ec0fffde866cd890267e">SetVerifyDataGlobal</a> (<a class="el" href="group__GenClassSupport.html#ga58e0144d240fc7ad45518d4c3ba735e1">ESerialVerifyData</a> <a class="el" href="ftds14_2freetds_2dblib_2unittests_2t0002_8c.html#a80ddcf418c95fb872f5eeccb9908b4c7">verify</a>)</td></tr>
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<tr class="memitem:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gada3dbb83951d0bed9bde06c6c4ede9e2">UnassignedString</a> (void)</td></tr>
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||
<tr class="separator:gada3dbb83951d0bed9bde06c6c4ede9e2 inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__STL.html#ga88e22aab83a29bae20f5354e89b041e3">CStringUTF8</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga123d82fb69550b6418ad5d69e752873a">UnassignedStringUTF8</a> (void)</td></tr>
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<tr class="separator:ga123d82fb69550b6418ad5d69e752873a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga1d897c6ce0f541df2487600cedd9f40a">UnassignedByte</a> (void)</td></tr>
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<tr class="separator:ga1d897c6ce0f541df2487600cedd9f40a inherit pub_static_methods_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="inherit_header pub_static_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCObject')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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||
<tr class="memitem:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">ThrowNullPointerException</a> (void)</td></tr>
|
||
<tr class="memdesc:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define method to throw null pointer exception. <a href="group__Object.html#ga63f363685df177bedf4a7f4ed7797a07">More...</a><br /></td></tr>
|
||
<tr class="separator:ga63f363685df177bedf4a7f4ed7797a07 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__WinDLL.html#gab1bd38411cb05b5e6f85c9735a486682">NCBI_XNCBI_EXPORT</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae042a181e665dd40945c1c1a7a6bc5d1">ThrowNullPointerException</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> type_info &<a class="el" href="structtype.html">type</a>)</td></tr>
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<tr class="separator:gae042a181e665dd40945c1c1a7a6bc5d1 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga4b6f1beef2a1f37c68f7f3b1aac471d8">GetAllocFillMode</a> (void)</td></tr>
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<tr class="separator:ga4b6f1beef2a1f37c68f7f3b1aac471d8 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga42eceef165a83cc081837a373ab6dd67">SetAllocFillMode</a> (<a class="el" href="group__Object.html#ga3cf5f3ac0aef32c4aab1fa66513588cc">EAllocFillMode</a> <a class="el" href="mdb__load_8c.html#a1ea5d0cb93f22f7d0fdf804bd68c3326">mode</a>)</td></tr>
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<tr class="separator:ga42eceef165a83cc081837a373ab6dd67 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">SetAllocFillMode</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
|
||
<tr class="memdesc:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Set mode from configuration parameter value. <a href="group__Object.html#ga05dafbb430a19e98affa48e669d694f7">More...</a><br /></td></tr>
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<tr class="separator:ga05dafbb430a19e98affa48e669d694f7 inherit pub_static_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_static_methods_classCDebugDumpable"><td colspan="2" onclick="javascript:toggleInherit('pub_static_methods_classCDebugDumpable')"><img src="closed.png" alt="-"/> Static Public Member Functions inherited from <a class="el" href="classCDebugDumpable.html">CDebugDumpable</a></td></tr>
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<tr class="memitem:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCDebugDumpable.html#ab6ba54280c562230f65733cca0560c83">EnableDebugDump</a> (<a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> on)</td></tr>
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<tr class="separator:ab6ba54280c562230f65733cca0560c83 inherit pub_static_methods_classCDebugDumpable"><td class="memSeparator" colspan="2"> </td></tr>
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||
</table><table class="memberdecls">
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||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-types"></a>
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||
Private Types</h2></td></tr>
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||
<tr class="memitem:ab323a650a1a228b4e5f212d7f7871c53"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCBioSource__Base.html">CBioSource_Base</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ab323a650a1a228b4e5f212d7f7871c53">Tparent</a></td></tr>
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||
<tr class="separator:ab323a650a1a228b4e5f212d7f7871c53"><td class="memSeparator" colspan="2"> </td></tr>
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</table><table class="memberdecls">
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||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
|
||
Private Member Functions</h2></td></tr>
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||
<tr class="memitem:a239cafa37ec903bbcf3e07539807e762"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a239cafa37ec903bbcf3e07539807e762">CBioSource</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="separator:a239cafa37ec903bbcf3e07539807e762"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ac1d9ac3cb1fe97a29d9afb0daccbd6b5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCBioSource.html">CBioSource</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ac1d9ac3cb1fe97a29d9afb0daccbd6b5">operator=</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &<a class="el" href="ftds14_2freetds_2tds_2config_8c.html#ac6de4458dc999b0ad86cfcbaaf37222a">value</a>)</td></tr>
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||
<tr class="separator:ac1d9ac3cb1fe97a29d9afb0daccbd6b5"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a5ccb5c3d57f90a45afd89372fe1ca9c5"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a5ccb5c3d57f90a45afd89372fe1ca9c5">x_ClearCoordinatedBioSampleSubSources</a> ()</td></tr>
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||
<tr class="separator:a5ccb5c3d57f90a45afd89372fe1ca9c5"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:a1a5313a3c685bf92b2b2e5977ed146ff"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a1a5313a3c685bf92b2b2e5977ed146ff">x_ClearCoordinatedBioSampleOrgMods</a> ()</td></tr>
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<tr class="separator:a1a5313a3c685bf92b2b2e5977ed146ff"><td class="memSeparator" colspan="2"> </td></tr>
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||
<tr class="memitem:ab88d779bfc1ca5e9475af75c377498d7"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">TNameValList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ab88d779bfc1ca5e9475af75c377498d7">x_GetOrgModNameValPairs</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
||
<tr class="separator:ab88d779bfc1ca5e9475af75c377498d7"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a985049d2f2dc5615dbd34b8ca06704c7"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">TNameValList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a985049d2f2dc5615dbd34b8ca06704c7">x_GetSubtypeNameValPairs</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
|
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<tr class="separator:a985049d2f2dc5615dbd34b8ca06704c7"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a61665a6f3a7a1a92818924b079faa253"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#a61665a6f3a7a1a92818924b079faa253">x_RemoveNameElementDiffs</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> &biosample, <a class="el" href="BioSource_8hpp.html#aa8320d9b0ed42bb6fb41e74e64a2b0fd">TFieldDiffList</a> &diff_list) <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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<tr class="separator:a61665a6f3a7a1a92818924b079faa253"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aa0e7b7a4dd164b510dec5098664c78b3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#aa0e7b7a4dd164b510dec5098664c78b3">x_ShouldIgnoreNoteForBiosample</a> () <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a></td></tr>
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||
<tr class="separator:aa0e7b7a4dd164b510dec5098664c78b3"><td class="memSeparator" colspan="2"> </td></tr>
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</table><table class="memberdecls">
|
||
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-static-methods"></a>
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||
Static Private Member Functions</h2></td></tr>
|
||
<tr class="memitem:af2d3087248c23b44a22aee6cec215565"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#af2d3087248c23b44a22aee6cec215565">x_InitStopWords</a> (void)</td></tr>
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<tr class="separator:af2d3087248c23b44a22aee6cec215565"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ab112947e015b909a0884ddc9eae72155"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void </td><td class="memItemRight" valign="bottom"><a class="el" href="classCBioSource.html#ab112947e015b909a0884ddc9eae72155">x_RemoveStopWords</a> (<a class="el" href="classCOrg__ref.html">COrg_ref</a> &org_ref)</td></tr>
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<tr class="separator:ab112947e015b909a0884ddc9eae72155"><td class="memSeparator" colspan="2"> </td></tr>
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</table><table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
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Additional Inherited Members</h2></td></tr>
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||
<tr class="inherit_header pub_static_attribs_classCSerialObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCSerialObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCSerialObject.html">CSerialObject</a></td></tr>
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||
<tr class="memitem:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gacf732f6a9f64037d0cad32a72f7522ea">ms_UnassignedStr</a> = "<*unassigned*>"</td></tr>
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<tr class="separator:gacf732f6a9f64037d0cad32a72f7522ea inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> char </td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga6baaf827f8d2e4f98be84d91d511a716">ms_UnassignedByte</a> = char(0xcd)</td></tr>
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<tr class="separator:ga6baaf827f8d2e4f98be84d91d511a716 inherit pub_static_attribs_classCSerialObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pub_static_attribs_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pub_static_attribs_classCObject')"><img src="closed.png" alt="-"/> Static Public Attributes inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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||
<tr class="memitem:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">eCounterBitsCanBeDeleted</a> = 1 << 0</td></tr>
|
||
<tr class="memdesc:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Define possible object states. <a href="group__Object.html#ga6b2ef05fc91950a79ed938def4fd705d">More...</a><br /></td></tr>
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||
<tr class="separator:ga6b2ef05fc91950a79ed938def4fd705d inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">eCounterBitsInPlainHeap</a> = 1 << 1</td></tr>
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<tr class="memdesc:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Heap signature was found. <a href="group__Object.html#gae6d5b68d219dbdb40e88737873a3488c">More...</a><br /></td></tr>
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<tr class="separator:gae6d5b68d219dbdb40e88737873a3488c inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">eCounterBitsPlaceMask</a></td></tr>
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||
<tr class="memdesc:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Mask for 'in heap' state flags. <a href="group__Object.html#ga33e4da9c60adbc3cf2a0ca45ce21a2ba">More...</a><br /></td></tr>
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<tr class="separator:ga33e4da9c60adbc3cf2a0ca45ce21a2ba inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">eCounterStep</a> = 1 << 2</td></tr>
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<tr class="memdesc:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Skip over the "in heap" bits. <a href="group__Object.html#ga0a412d4ea79669d73671f89cb3e798a2">More...</a><br /></td></tr>
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<tr class="separator:ga0a412d4ea79669d73671f89cb3e798a2 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">eCounterValid</a> = <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>(1) << (sizeof(<a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a>) * 8 - 2)</td></tr>
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<tr class="memdesc:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Minimal value for valid objects (reference counter is zero) Must be a single bit value. <a href="group__Object.html#gab5880debef7cc7eb2a2891f440cd7569">More...</a><br /></td></tr>
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<tr class="separator:gab5880debef7cc7eb2a2891f440cd7569 inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memItemLeft" align="right" valign="top"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> <a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__Object.html#ga2e073b6c5b9c29648510bd99ebe00a5c">TCount</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">eCounterStateMask</a></td></tr>
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<tr class="memdesc:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Valid object, and object in heap. <a href="group__Object.html#gaff6eaaf8b9c4040a05fe2325ab75f44e">More...</a><br /></td></tr>
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<tr class="separator:gaff6eaaf8b9c4040a05fe2325ab75f44e inherit pub_static_attribs_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="inherit_header pro_methods_classCObject"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classCObject')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classCObject.html">CObject</a></td></tr>
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<tr class="memitem:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">DeleteThis</a> (void)</td></tr>
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<tr class="memdesc:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="mdescLeft"> </td><td class="mdescRight">Virtual method "deleting" this object. <a href="group__Object.html#ga7b33b6d311860b76f3a8a79fcb7f9938">More...</a><br /></td></tr>
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<tr class="separator:ga7b33b6d311860b76f3a8a79fcb7f9938 inherit pro_methods_classCObject"><td class="memSeparator" colspan="2"> </td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
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<p class="definition">Definition at line <a class="el" href="BioSource_8hpp_source.html#l00058">58</a> of file <a class="el" href="BioSource_8hpp_source.html">BioSource.hpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a37808275f66f57282471a0abe78acbc9">◆ </a></span>TNameVal</h2>
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<td class="memname">typedef pair<<a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a>, <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a>> <a class="el" href="classCBioSource.html#a37808275f66f57282471a0abe78acbc9">CBioSource::TNameVal</a></td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8hpp_source.html#l00126">126</a> of file <a class="el" href="BioSource_8hpp_source.html">BioSource.hpp</a>.</p>
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<a id="a9b5a948b61cab056750a93db2ea0d584"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a9b5a948b61cab056750a93db2ea0d584">◆ </a></span>TNameValList</h2>
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<td class="memname">typedef vector<<a class="el" href="classCBioSource.html#a37808275f66f57282471a0abe78acbc9">TNameVal</a>> <a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">CBioSource::TNameValList</a></td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8hpp_source.html#l00127">127</a> of file <a class="el" href="BioSource_8hpp_source.html">BioSource.hpp</a>.</p>
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<a id="ab323a650a1a228b4e5f212d7f7871c53"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ab323a650a1a228b4e5f212d7f7871c53">◆ </a></span>Tparent</h2>
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<td class="memname">typedef <a class="el" href="classCBioSource__Base.html">CBioSource_Base</a> <a class="el" href="classCBioSource.html#ab323a650a1a228b4e5f212d7f7871c53">CBioSource::Tparent</a></td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8hpp_source.html#l00060">60</a> of file <a class="el" href="BioSource_8hpp_source.html">BioSource.hpp</a>.</p>
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<h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<a id="a6118b949c5729e9bfc230ffb6d55fda8"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a6118b949c5729e9bfc230ffb6d55fda8">◆ </a></span>CBioSource() <span class="overload">[1/2]</span></h2>
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<td class="memname">CBioSource::CBioSource </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8hpp_source.html#l00203">203</a> of file <a class="el" href="BioSource_8hpp_source.html">BioSource.hpp</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01989">MakeCommonExceptOrg()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ae5b1c70b73a79b0a66a181727b890cca">◆ </a></span>~CBioSource()</h2>
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<td class="memname">CBioSource::~CBioSource </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00068">68</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a239cafa37ec903bbcf3e07539807e762">◆ </a></span>CBioSource() <span class="overload">[2/2]</span></h2>
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<td class="memname">CBioSource::CBioSource </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<td class="paramname"><em>value</em></td><td>)</td>
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<h2 class="groupheader">Member Function Documentation</h2>
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<a id="a013b3c4f1bcf0dce40b5befc47d137fa"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a013b3c4f1bcf0dce40b5befc47d137fa">◆ </a></span>AllowMatingTypeQualifier() <span class="overload">[1/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::AllowMatingTypeQualifier </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01900">1900</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource_8cpp_source.html#l00360">GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01910">FixSexMatingTypeInconsistencies()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a700d092581c2cf564e6ff151b8cb4dc7">◆ </a></span>AllowMatingTypeQualifier() <span class="overload">[2/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::AllowMatingTypeQualifier </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01878">1878</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l01206">NStr::eNocase</a>, <a class="el" href="BioSource_8cpp_source.html#l01835">IsViral()</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01746">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ac14af937cad19373e54f03617b22b3c5">◆ </a></span>AllowSexQualifier() <span class="overload">[1/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::AllowSexQualifier </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01868">1868</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource_8cpp_source.html#l00360">GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01910">FixSexMatingTypeInconsistencies()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a2f6b3a96c218226631f67aabde255402">◆ </a></span>AllowSexQualifier() <span class="overload">[2/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::AllowSexQualifier </td>
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<td>(</td>
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||
<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
|
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01845">1845</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l01206">NStr::eNocase</a>, <a class="el" href="BioSource_8cpp_source.html#l01835">IsViral()</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01746">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a515d333550e78dd9031dfaadb6af192a">◆ </a></span>AutoFix()</h2>
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<td class="memname">void CBioSource::AutoFix </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01392">1392</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="SubSource_8cpp_source.html#l00231">CSubSource::NeedsNoText()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="compare__with__biosample_8cpp_source.html#l00445">CCompareWithBiosample::OnClickOk()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a08037fd56a92053b605894781644ec62">◆ </a></span>BiosampleDiffsOkForUpdate()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::BiosampleDiffsOkForUpdate </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="BioSource_8hpp.html#aa8320d9b0ed42bb6fb41e74e64a2b0fd">TFieldDiffList</a> & </td>
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<td class="paramname"><em>diffs</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00693">693</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a1426583d74bec09112dcebc90902643e">◆ </a></span>FixEnvironmentalSample()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::FixEnvironmentalSample </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01681">1681</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="SubSource___8hpp_source.html#l00111">CSubSource_Base::eSubtype_environmental_sample</a>, <a class="el" href="OrgMod___8hpp_source.html#l00120">COrgMod_Base::eSubtype_metagenome_source</a>, <a class="el" href="SubSource___8hpp_source.html#l00121">CSubSource_Base::eSubtype_metagenomic</a>, <a class="el" href="ncbistr_8cpp_source.html#l02882">NStr::Find()</a>, <a class="el" href="BioSource_8cpp_source.html#l00360">GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource_8cpp_source.html#l00340">GetTaxname()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="BioSource_8cpp_source.html#l00335">IsSetTaxname()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="newcleanupp_8cpp_source.html#l01550">CNewCleanup_imp::BiosourceBC()</a>, and <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01675">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a775bce02efa076b8d6b0de3a3dd77704">◆ </a></span>FixGenomeForQualifiers()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::FixGenomeForQualifiers </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01974">1974</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00107">CBioSource_Base::eGenome_plasmid</a>, <a class="el" href="BioSource___8hpp_source.html#l00098">CBioSource_Base::eGenome_unknown</a>, <a class="el" href="SubSource___8hpp_source.html#l00103">CSubSource_Base::eSubtype_plasmid_name</a>, <a class="el" href="BioSource___8hpp_source.html#l00422">CBioSource_Base::GetGenome()</a>, <a class="el" href="BioSource_8cpp_source.html#l02040">HasSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00397">CBioSource_Base::IsSetGenome()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00435">CBioSource_Base::SetGenome()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="newcleanupp_8cpp_source.html#l01550">CNewCleanup_imp::BiosourceBC()</a>, and <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01822">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a55a7ae0f1e8076bbc840b71c784b5d96">◆ </a></span>FixSexMatingTypeInconsistencies()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::FixSexMatingTypeInconsistencies </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01910">1910</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource_8cpp_source.html#l01900">AllowMatingTypeQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01868">AllowSexQualifier()</a>, <a class="el" href="SubSource___8hpp_source.html#l00122">CSubSource_Base::eSubtype_mating_type</a>, <a class="el" href="SubSource___8hpp_source.html#l00091">CSubSource_Base::eSubtype_sex</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="SubSource_8cpp_source.html#l02533">CSubSource::IsValidSexQualifierValue()</a>, <a class="el" href="ftds100_2freetds_2freetds_2dlist_8tmpl_8h_source.html#l00090">remove()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>, and <a class="el" href="namespacencbi_1_1grid_1_1netcache_1_1search_1_1fields.html#a0f3896dcec83a75496951b513af45a54">ncbi::grid::netcache::search::fields::size</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01746">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a53f80a590ee5452bcff0819056ae266b">◆ </a></span>GetBioprojectLocation()</h2>
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<td class="memname"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> CBioSource::GetBioprojectLocation </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00522">522</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00114">CBioSource_Base::eGenome_apicoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00100">CBioSource_Base::eGenome_chloroplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00120">CBioSource_Base::eGenome_chromatophore</a>, <a class="el" href="BioSource___8hpp_source.html#l00101">CBioSource_Base::eGenome_chromoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00119">CBioSource_Base::eGenome_chromosome</a>, <a class="el" href="BioSource___8hpp_source.html#l00110">CBioSource_Base::eGenome_cyanelle</a>, <a class="el" href="BioSource___8hpp_source.html#l00117">CBioSource_Base::eGenome_endogenous_virus</a>, <a class="el" href="BioSource___8hpp_source.html#l00106">CBioSource_Base::eGenome_extrachrom</a>, <a class="el" href="BioSource___8hpp_source.html#l00099">CBioSource_Base::eGenome_genomic</a>, <a class="el" href="BioSource___8hpp_source.html#l00118">CBioSource_Base::eGenome_hydrogenosome</a>, <a class="el" href="BioSource___8hpp_source.html#l00109">CBioSource_Base::eGenome_insertion_seq</a>, <a class="el" href="BioSource___8hpp_source.html#l00102">CBioSource_Base::eGenome_kinetoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00115">CBioSource_Base::eGenome_leucoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00105">CBioSource_Base::eGenome_macronuclear</a>, <a class="el" href="BioSource___8hpp_source.html#l00103">CBioSource_Base::eGenome_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00113">CBioSource_Base::eGenome_nucleomorph</a>, <a class="el" href="BioSource___8hpp_source.html#l00107">CBioSource_Base::eGenome_plasmid</a>, <a class="el" href="BioSource___8hpp_source.html#l00104">CBioSource_Base::eGenome_plastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00116">CBioSource_Base::eGenome_proplastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00111">CBioSource_Base::eGenome_proviral</a>, <a class="el" href="BioSource___8hpp_source.html#l00108">CBioSource_Base::eGenome_transposon</a>, <a class="el" href="BioSource___8hpp_source.html#l00098">CBioSource_Base::eGenome_unknown</a>, <a class="el" href="BioSource___8hpp_source.html#l00112">CBioSource_Base::eGenome_virion</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="ncbistr_8cpp_source.html#l02984">NStr::FindNoCase()</a>, <a class="el" href="BioSource_8cpp_source.html#l00482">GetBioprojectType()</a>, <a class="el" href="BioSource___8hpp_source.html#l00422">CBioSource_Base::GetGenome()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00124">COrg_ref::GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00397">CBioSource_Base::IsSetGenome()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01910">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01899">CheckBioProjectLocationVals()</a>, and <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01878">CheckViruses()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a8dd96664cdd085c3bae3e6035658ea95">◆ </a></span>GetBioprojectType()</h2>
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<td class="memname"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> CBioSource::GetBioprojectType </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00482">482</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00119">CBioSource_Base::eGenome_chromosome</a>, <a class="el" href="BioSource___8hpp_source.html#l00106">CBioSource_Base::eGenome_extrachrom</a>, <a class="el" href="BioSource___8hpp_source.html#l00107">CBioSource_Base::eGenome_plasmid</a>, <a class="el" href="BioSource___8hpp_source.html#l00121">CBioSource_Base::eGenome_plasmid_in_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00122">CBioSource_Base::eGenome_plasmid_in_plastid</a>, <a class="el" href="SubSource___8hpp_source.html#l00123">CSubSource_Base::eSubtype_linkage_group</a>, <a class="el" href="SubSource___8hpp_source.html#l00103">CSubSource_Base::eSubtype_plasmid_name</a>, <a class="el" href="ncbistr_8cpp_source.html#l02984">NStr::FindNoCase()</a>, <a class="el" href="BioSource___8hpp_source.html#l00422">CBioSource_Base::GetGenome()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00124">COrg_ref::GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00397">CBioSource_Base::IsSetGenome()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01910">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01899">CheckBioProjectLocationVals()</a>, <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01890">CheckPlasmid()</a>, <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01878">CheckViruses()</a>, <a class="el" href="BioSource_8cpp_source.html#l00522">GetBioprojectLocation()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00421">GetRepliconName()</a>.</p>
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<td class="memname"><a class="el" href="BioSource_8hpp.html#aa8320d9b0ed42bb6fb41e74e64a2b0fd">TFieldDiffList</a> CBioSource::GetBiosampleDiffs </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01327">1327</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource_8cpp_source.html#l01207">GetFieldDiffsFromNameValLists()</a>, <a class="el" href="BioSource_8cpp_source.html#l00811">GetNameValPairs()</a>, <a class="el" href="BioSource_8cpp_source.html#l01303">RemoveDiffByName()</a>, <a class="el" href="BioSource_8cpp_source.html#l00868">s_CompareNameVals()</a>, <a class="el" href="compile__time_8hpp_source.html#l00173">ct::sort()</a>, and <a class="el" href="BioSource_8cpp_source.html#l01316">x_ShouldIgnoreNoteForBiosample()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="unit__test__biosample__chk_8cpp_source.html#l00098">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="biosample__util_8cpp_source.html#l00515">GetFieldDiffs()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a69edd348fbd36971adb5a5e6a284ddd3">◆ </a></span>GetCommon()</h2>
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<td class="memname"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & CBioSource::GetCommon </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00350">350</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Org__ref___8hpp_source.html#l00419">COrg_ref_Base::GetCommon()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="srcedit__util_8cpp_source.html#l02473">CSrcTableCommonNameColumn::GetFromBioSource()</a>, and <a class="el" href="indexer_8cpp_source.html#l01305">CBioseqIndex::x_InitSource()</a>.</p>
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<a id="a35381f2f0e3dbef7f0b48b3ef7f35e0e"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a35381f2f0e3dbef7f0b48b3ef7f35e0e">◆ </a></span>GetDisableStrainForwarding()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::GetDisableStrainForwarding </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00647">647</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ncbistr_8cpp_source.html#l02882">NStr::Find()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l00619">kDisableStrainForwardAttrib</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="unit__test__validator_8cpp_source.html#l21502">BOOST_AUTO_TEST_CASE()</a>.</p>
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<a id="a6d824f81278fd7239c430ba5ac1ba02d"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a6d824f81278fd7239c430ba5ac1ba02d">◆ </a></span>GetDivision()</h2>
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<td class="memname"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & CBioSource::GetDivision </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00400">400</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Org__ref_8cpp_source.html#l00164">COrg_ref::GetDivision()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="srcedit__util_8cpp_source.html#l02483">CSrcTableDivisionColumn::GetFromBioSource()</a>, and <a class="el" href="newcleanupp_8cpp_source.html#l08593">IsBadSeqInstStrand()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a51bbe7c11d970dffa9a1331f8110bac6">◆ </a></span>GetGcode()</h2>
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<td class="memname"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> CBioSource::GetGcode </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00370">370</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Org__ref_8cpp_source.html#l00134">COrg_ref::GetGcode()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Source__qual__choice_8cpp_source.html#l00104">CSource_qual_choice::GetLimitedSourceQualFromBioSource()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a5317f4eeae9d47f514eb91921c11c1a3">◆ </a></span>GetGenCode()</h2>
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<td class="memname"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> CBioSource::GetGenCode </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00073">73</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00403">CBioSource_Base::CanGetGenome()</a>, <a class="el" href="BioSource___8hpp_source.html#l00503">CBioSource_Base::CanGetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00114">CBioSource_Base::eGenome_apicoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00100">CBioSource_Base::eGenome_chloroplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00120">CBioSource_Base::eGenome_chromatophore</a>, <a class="el" href="BioSource___8hpp_source.html#l00101">CBioSource_Base::eGenome_chromoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00110">CBioSource_Base::eGenome_cyanelle</a>, <a class="el" href="BioSource___8hpp_source.html#l00118">CBioSource_Base::eGenome_hydrogenosome</a>, <a class="el" href="BioSource___8hpp_source.html#l00102">CBioSource_Base::eGenome_kinetoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00115">CBioSource_Base::eGenome_leucoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00103">CBioSource_Base::eGenome_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00121">CBioSource_Base::eGenome_plasmid_in_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00122">CBioSource_Base::eGenome_plasmid_in_plastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00104">CBioSource_Base::eGenome_plastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00116">CBioSource_Base::eGenome_proplastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00098">CBioSource_Base::eGenome_unknown</a>, <a class="el" href="OrgName___8hpp_source.html#l00918">COrgName_Base::GetGcode()</a>, <a class="el" href="BioSource___8hpp_source.html#l00422">CBioSource_Base::GetGenome()</a>, <a class="el" href="OrgName___8hpp_source.html#l00965">COrgName_Base::GetMgcode()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00541">COrg_ref_Base::GetOrgname()</a>, <a class="el" href="OrgName___8hpp_source.html#l01059">COrgName_Base::GetPgcode()</a>, <a class="el" href="OrgName___8hpp_source.html#l00899">COrgName_Base::IsSetGcode()</a>, <a class="el" href="OrgName___8hpp_source.html#l00946">COrgName_Base::IsSetMgcode()</a>, and <a class="el" href="OrgName___8hpp_source.html#l01040">COrgName_Base::IsSetPgcode()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="gui_2objutils_2utils_8cpp_source.html#l02359">CSeqUtils::GetGenCode()</a>, <a class="el" href="cds__fix_8cpp_source.html#l00707">GetGeneticCodeForBioseq()</a>, <a class="el" href="cleanup_8cpp_source.html#l02122">CCleanup::SetGeneticCodes()</a>, <a class="el" href="blast__objmgr__tools_8cpp_source.html#l00111">CBlastQuerySourceOM::x_AutoDetectGeneticCodes()</a>, <a class="el" href="sparse__aln_8cpp_source.html#l00446">CSparseAln::x_GetGenCode()</a>, <a class="el" href="newcleanupp_8cpp_source.html#l09061">CNewCleanup_imp::x_tRNACodonEC()</a>, and <a class="el" href="single__feat__validator_8cpp_source.html#l03488">CRNAValidator::x_ValidateTrnaCodons()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#abc0ce3ba1abf8099740c3f1023638803">◆ </a></span>GetGenomeByOrganelle()</h2>
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<td class="memname"><a class="el" href="group__dataspec__NCBI__BioSource.html#gae2ac4b91f2249f0563a61bea4ad4504b">CBioSource::EGenome</a> CBioSource::GetGenomeByOrganelle </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<td class="paramname"><em>organelle</em>, </td>
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<td class="paramtype"><a class="el" href="group__String.html#gad888eea21af8c5f8294d16def6f96fb2">NStr::ECase</a> </td>
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<td class="paramname"><em>use_case</em> = <code><a class="el" href="group__String.html#ggad888eea21af8c5f8294d16def6f96fb2abb8c4e17d43fda080409383baca854ee">NStr::eCase</a></code>, </td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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<td class="paramname"><em>starts_with</em> = <code><a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a></code> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00168">168</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l01205">NStr::eCase</a>, <a class="el" href="BioSource___8hpp_source.html#l00103">CBioSource_Base::eGenome_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00098">CBioSource_Base::eGenome_unknown</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="ncbictype_8hpp_source.html#l00069">isspace()</a>, <a class="el" href="pcre2__match_8c_source.html#l00594">match()</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="clear__keywords_8cpp_source.html#l00274">CClearKeywords::ApplyToCSeq_entry()</a>, <a class="el" href="newcleanupp_8cpp_source.html#l10394">BioSourceFromImpFeat()</a>, <a class="el" href="col__validator_8cpp_source.html#l00194">CAutoColValidatorgenome::DoValidate()</a>, <a class="el" href="autodef__options_8cpp_source.html#l00285">CAutoDefOptions::GetNuclearCopyFlag()</a>, <a class="el" href="autodef__options_8cpp_source.html#l00273">CAutoDefOptions::GetProductFlag()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01459">CSrcTableGenomeColumn::IsValid()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l00516">CValidError_imp::ValidateBioSource()</a>, and <a class="el" href="loc__gcode__panel_8cpp_source.html#l00376">CLocAndGCodePanel::x_SetLocation()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a013f4740cc9e22621bac9ea120391120">◆ </a></span>GetLineage()</h2>
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<td class="memname"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & CBioSource::GetLineage </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00360">360</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="Org__ref_8cpp_source.html#l00124">COrg_ref::GetLineage()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01900">AllowMatingTypeQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01868">AllowSexQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01681">FixEnvironmentalSample()</a>, <a class="el" href="convert__cds__with__gaps__to__misc__feat_8cpp_source.html#l00493">CConvertBadCdsAndRnaToMiscFeat::getBacterialPartialNonextendable()</a>, <a class="el" href="convert__cds__with__gaps__to__misc__feat_8cpp_source.html#l00571">CConvertBadCdsAndRnaToMiscFeat::getCdsOverlap()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l02478">CSrcTableLineageColumn::GetFromBioSource()</a>, <a class="el" href="gene__qual__normalization_8cpp_source.html#l00154">CCleanup::GetNormalizableGeneQualPairs()</a>, <a class="el" href="convert__cds__with__gaps__to__misc__feat_8cpp_source.html#l00685">CConvertBadCdsAndRnaToMiscFeat::getRnaOverlap()</a>, <a class="el" href="discrepancy__context_8cpp_source.html#l00107">CDiscrepancyContext::HasLineage()</a>, <a class="el" href="newcleanupp_8cpp_source.html#l08593">IsBadSeqInstStrand()</a>, <a class="el" href="BioSource_8cpp_source.html#l01835">IsViral()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l00348">CBioSourceKind::operator=()</a>, <a class="el" href="BioSource_8cpp_source.html#l01519">RemoveLineageSourceNotes()</a>, <a class="el" href="adjust__consensus__splicesite_8cpp_source.html#l00362">CAdjustForConsensusSpliceSite::s_IsBioseqGood_Strict()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l00516">CValidError_imp::ValidateBioSource()</a>, <a class="el" href="validerror__bioseq_8cpp_source.html#l06071">CValidError_bioseq::ValidateSeqFeatContext()</a>, <a class="el" href="BioSource_8cpp_source.html#l01316">x_ShouldIgnoreNoteForBiosample()</a>, and <a class="el" href="validerror__bioseq_8cpp_source.html#l05091">CValidError_bioseq::x_ValidateCompletness()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#abac8808b6311a3973fd4d0a0c988b58e">◆ </a></span>GetMgcode()</h2>
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<td class="memname"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> CBioSource::GetMgcode </td>
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<td>(</td>
|
||
<td class="paramtype">void </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00380">380</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
|
||
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||
<p class="reference">References <a class="el" href="Org__ref_8cpp_source.html#l00144">COrg_ref::GetMgcode()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>.</p>
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||
|
||
<p class="reference">Referenced by <a class="el" href="Source__qual__choice_8cpp_source.html#l00104">CSource_qual_choice::GetLimitedSourceQualFromBioSource()</a>.</p>
|
||
|
||
</div>
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||
</div>
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||
<a id="a2c93c67fed69fe12479fdac4154e348e"></a>
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||
<h2 class="memtitle"><span class="permalink"><a href="#a2c93c67fed69fe12479fdac4154e348e">◆ </a></span>GetNameValPairs()</h2>
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||
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||
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<div class="memproto">
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<td class="memname"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">CBioSource::TNameValList</a> CBioSource::GetNameValPairs </td>
|
||
<td>(</td>
|
||
<td class="paramname"></td><td>)</td>
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||
<td> const</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00811">811</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
|
||
|
||
<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00072">COrg_ref::GetTaxId()</a>, <a class="el" href="BioSource_8cpp_source.html#l00340">GetTaxname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00335">IsSetTaxname()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="BioSource_8cpp_source.html#l00808">kOrganismName</a>, <a class="el" href="BioSource_8cpp_source.html#l00809">kTaxId</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l00673">NStr::NumericToString()</a>, <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>, <a class="el" href="BioSource_8cpp_source.html#l00879">x_GetOrgModNameValPairs()</a>, <a class="el" href="BioSource_8cpp_source.html#l00900">x_GetSubtypeNameValPairs()</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l01115">ZERO_TAX_ID</a>.</p>
|
||
|
||
<p class="reference">Referenced by <a class="el" href="biosample__util_8cpp_source.html#l00751">AddBioseqToTable()</a>, and <a class="el" href="BioSource_8cpp_source.html#l01327">GetBiosampleDiffs()</a>.</p>
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</div>
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</div>
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<a id="a315e37acceb354f5b6a7e12107a17c5e"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a315e37acceb354f5b6a7e12107a17c5e">◆ </a></span>GetOrganelleByGenome()</h2>
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<div class="memitem">
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<div class="memproto">
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<td class="memname"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> CBioSource::GetOrganelleByGenome </td>
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||
<td>(</td>
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<td class="paramtype">unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td>
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||
<td class="paramname"><em>genome</em></td><td>)</td>
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<td></td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00216">216</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
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||
<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l00123">kEmptyStr</a>.</p>
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||
<p class="reference">Referenced by <a class="el" href="cleanup_8cpp_source.html#l02371">CCleanup::AddPartialToProteinTitle()</a>, <a class="el" href="clear__keywords_8cpp_source.html#l00138">CClearKeywords::CreateControls()</a>, <a class="el" href="autodef__options_8cpp_source.html#l00279">CAutoDefOptions::GetNuclearCopyFlag()</a>, <a class="el" href="autodef__options_8cpp_source.html#l00267">CAutoDefOptions::GetProductFlag()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01008">GetSeqTableFromSeqEntry()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l00139">CGenomeQual::GetValue()</a>, <a class="el" href="cleanup_8cpp_source.html#l02180">s_TitleEndsInOrganism()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l00516">CValidError_imp::ValidateBioSource()</a>, <a class="el" href="loc__gcode__panel_8cpp_source.html#l00445">CLocAndGCodePanel::x_GetLocation()</a>, and <a class="el" href="src__writer_8cpp_source.html#l00978">CSrcWriter::xGatherGenome()</a>.</p>
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<a id="a6b60eb5784bf66a77638f6763e87b9f5"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a6b60eb5784bf66a77638f6763e87b9f5">◆ </a></span>GetOrgname()</h2>
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<td class="memname"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCOrgName.html">COrgName</a> & CBioSource::GetOrgname </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00410">410</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
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||
<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, and <a class="el" href="Org__ref___8hpp_source.html#l00541">COrg_ref_Base::GetOrgname()</a>.</p>
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||
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||
<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01900">AllowMatingTypeQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01868">AllowSexQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01392">AutoFix()</a>, <a class="el" href="unit__test__uncultured__taxlookup_8cpp_source.html#l00516">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="fta__src_8cpp_source.html#l03049">CheckMetagenome()</a>, <a class="el" href="sequence__tests_8cpp_source.html#l01464">CompareOrgModValue()</a>, <a class="el" href="BioSource_8cpp_source.html#l01681">FixEnvironmentalSample()</a>, <a class="el" href="BioSource_8cpp_source.html#l00647">GetDisableStrainForwarding()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01008">GetSeqTableFromSeqEntry()</a>, <a class="el" href="BioSource_8cpp_source.html#l01519">RemoveLineageSourceNotes()</a>, <a class="el" href="BioSource_8cpp_source.html#l01772">RemoveNullTerms()</a>, <a class="el" href="BioSource_8cpp_source.html#l01636">RemoveOrgMod()</a>, <a class="el" href="BioSource_8cpp_source.html#l01949">RemoveUnexpectedViralQualifiers()</a>, <a class="el" href="align__row_8cpp_source.html#l01060">s_GetOrgModNatHost()</a>, <a class="el" href="BioSource_8cpp_source.html#l00621">SetDisableStrainForwarding()</a>, <a class="el" href="sesame__street_8cpp_source.html#l00574">SetOrgMod()</a>, <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>, <a class="el" href="validerror__bioseqset_8cpp_source.html#l00426">CValidError_bioseqset::ValidateNucProtSet()</a>, <a class="el" href="create__defline_8cpp_source.html#l03260">CDeflineGenerator::x_AdjustProteinTitleSuffix()</a>, <a class="el" href="BioSource_8cpp_source.html#l00879">x_GetOrgModNameValPairs()</a>, <a class="el" href="indexer_8cpp_source.html#l01590">CBioseqIndex::x_InitDescs()</a>, <a class="el" href="indexer_8cpp_source.html#l01305">CBioseqIndex::x_InitSource()</a>, <a class="el" href="create__defline_8cpp_source.html#l01264">CDeflineGenerator::x_SetBioSrc()</a>, <a class="el" href="create__defline_8cpp_source.html#l00612">CDeflineGenerator::x_SetFlags()</a>, <a class="el" href="objtools_2format_2context_8cpp_source.html#l00372">CBioseqContext::x_SetTaxname()</a>, <a class="el" href="BioSource_8cpp_source.html#l01316">x_ShouldIgnoreNoteForBiosample()</a>, and <a class="el" href="src__writer_8cpp_source.html#l01070">CSrcWriter::xGatherOrgModFeat()</a>.</p>
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||
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<a id="a7bee2b7db1fd7404c116b75cedbb9cb3"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a7bee2b7db1fd7404c116b75cedbb9cb3">◆ </a></span>GetOriginByString()</h2>
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<td class="memname"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga946a969af73dc77c8ab3e311b6a13a41">CBioSource::EOrigin</a> CBioSource::GetOriginByString </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<td class="paramname"><em>origin</em>, </td>
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||
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<td class="paramkey"></td>
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<td></td>
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<td class="paramtype"><a class="el" href="group__String.html#gad888eea21af8c5f8294d16def6f96fb2">NStr::ECase</a> </td>
|
||
<td class="paramname"><em>use_case</em> = <code><a class="el" href="group__String.html#ggad888eea21af8c5f8294d16def6f96fb2abb8c4e17d43fda080409383baca854ee">NStr::eCase</a></code>, </td>
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<tr>
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<td class="paramkey"></td>
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<td></td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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||
<td class="paramname"><em>starts_with</em> = <code><a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a></code> </td>
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<td></td>
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<td>)</td>
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<td></td><td></td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00254">254</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l01205">NStr::eCase</a>, <a class="el" href="BioSource___8hpp_source.html#l00129">CBioSource_Base::eOrigin_unknown</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="ncbictype_8hpp_source.html#l00069">isspace()</a>, <a class="el" href="pcre2__match_8c_source.html#l00594">match()</a>, <a class="el" href="opengl__renderer_8cpp_source.html#l00159">origin</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>.</p>
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||
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||
<p class="reference">Referenced by <a class="el" href="srcedit__util_8cpp_source.html#l01481">CSrcTableOriginColumn::AddToBioSource()</a>, <a class="el" href="col__validator_8cpp_source.html#l00200">CAutoColValidatororigin::DoValidate()</a>, and <a class="el" href="srcedit__util_8cpp_source.html#l01510">CSrcTableOriginColumn::IsValid()</a>.</p>
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||
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||
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<a id="a3faa92551bb6dc029e2678e3a7515ef5"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a3faa92551bb6dc029e2678e3a7515ef5">◆ </a></span>GetPgcode()</h2>
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<td class="memname"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> CBioSource::GetPgcode </td>
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||
<td>(</td>
|
||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
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<td> const</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00390">390</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
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||
<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, and <a class="el" href="Org__ref_8cpp_source.html#l00154">COrg_ref::GetPgcode()</a>.</p>
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||
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<a id="a15b16b1a1813ffe52c50c45a6faf6509"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a15b16b1a1813ffe52c50c45a6faf6509">◆ </a></span>GetRepliconName()</h2>
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<td class="memname"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> CBioSource::GetRepliconName </td>
|
||
<td>(</td>
|
||
<td class="paramtype">void </td>
|
||
<td class="paramname"></td><td>)</td>
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||
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00421">421</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
|
||
|
||
<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00114">CBioSource_Base::eGenome_apicoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00100">CBioSource_Base::eGenome_chloroplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00120">CBioSource_Base::eGenome_chromatophore</a>, <a class="el" href="BioSource___8hpp_source.html#l00101">CBioSource_Base::eGenome_chromoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00119">CBioSource_Base::eGenome_chromosome</a>, <a class="el" href="BioSource___8hpp_source.html#l00118">CBioSource_Base::eGenome_hydrogenosome</a>, <a class="el" href="BioSource___8hpp_source.html#l00102">CBioSource_Base::eGenome_kinetoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00115">CBioSource_Base::eGenome_leucoplast</a>, <a class="el" href="BioSource___8hpp_source.html#l00103">CBioSource_Base::eGenome_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00107">CBioSource_Base::eGenome_plasmid</a>, <a class="el" href="BioSource___8hpp_source.html#l00121">CBioSource_Base::eGenome_plasmid_in_mitochondrion</a>, <a class="el" href="BioSource___8hpp_source.html#l00122">CBioSource_Base::eGenome_plasmid_in_plastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00104">CBioSource_Base::eGenome_plastid</a>, <a class="el" href="BioSource___8hpp_source.html#l00116">CBioSource_Base::eGenome_proplastid</a>, <a class="el" href="SubSource___8hpp_source.html#l00085">CSubSource_Base::eSubtype_chromosome</a>, <a class="el" href="SubSource___8hpp_source.html#l00109">CSubSource_Base::eSubtype_endogenous_virus_name</a>, <a class="el" href="SubSource___8hpp_source.html#l00123">CSubSource_Base::eSubtype_linkage_group</a>, <a class="el" href="SubSource___8hpp_source.html#l00103">CSubSource_Base::eSubtype_plasmid_name</a>, <a class="el" href="SubSource___8hpp_source.html#l00106">CSubSource_Base::eSubtype_plastid_name</a>, <a class="el" href="SubSource___8hpp_source.html#l00108">CSubSource_Base::eSubtype_segment</a>, <a class="el" href="BioSource_8cpp_source.html#l00482">GetBioprojectType()</a>, <a class="el" href="BioSource___8hpp_source.html#l00422">CBioSource_Base::GetGenome()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00397">CBioSource_Base::IsSetGenome()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l00123">kEmptyStr</a>.</p>
|
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|
||
<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01108">BOOST_AUTO_TEST_CASE()</a>, and <a class="el" href="gff3__writer_8cpp_source.html#l02462">CGff3Writer::xAssignSourceAttributeName()</a>.</p>
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||
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||
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<a id="ac91366b830a22bca2af1632d705de1fd"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ac91366b830a22bca2af1632d705de1fd">◆ </a></span>GetStringFromOrigin()</h2>
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<td class="memname"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> CBioSource::GetStringFromOrigin </td>
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||
<td>(</td>
|
||
<td class="paramtype">unsigned <a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td>
|
||
<td class="paramname"><em>origin</em></td><td>)</td>
|
||
<td></td>
|
||
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||
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|
||
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<td class="mlabels-right">
|
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00320">320</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="opengl__renderer_8cpp_source.html#l00159">origin</a>.</p>
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<p class="reference">Referenced by <a class="el" href="srcedit__util_8cpp_source.html#l01481">CSrcTableOriginColumn::AddToBioSource()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01501">CSrcTableOriginColumn::GetFromBioSource()</a>, and <a class="el" href="src__writer_8cpp_source.html#l00998">CSrcWriter::xGatherOrigin()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a0b31352fd2f660c1d6e6e335a979aca6">◆ </a></span>GetTaxname()</h2>
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<td class="memname"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & CBioSource::GetTaxname </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00340">340</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, and <a class="el" href="Org__ref___8hpp_source.html#l00372">COrg_ref_Base::GetTaxname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="export__table_8cpp_source.html#l00216">CExportTableDlg::AddBioSource()</a>, <a class="el" href="add__flu__comments_8cpp_source.html#l00172">CAddFluComments::AddBioSource()</a>, <a class="el" href="uncul__tax__tool_8cpp_source.html#l00809">CUnculTaxTool::AddBioSource()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01324">CSrcTaxnameAfterBinomialColumn::AddToBioSource()</a>, <a class="el" href="unit__test__uncultured__taxlookup_8cpp_source.html#l00176">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01342">CSrcTaxnameAfterBinomialColumn::ClearInBioSource()</a>, <a class="el" href="macro__fn__lookup_8cpp_source.html#l00105">CUnculturedTool::CorrectBioSource()</a>, <a class="el" href="capitalization__string_8cpp_source.html#l00758">FindOrgNames()</a>, <a class="el" href="BioSource_8cpp_source.html#l01681">FixEnvironmentalSample()</a>, <a class="el" href="BioSource_8cpp_source.html#l00811">GetNameValPairs()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01008">GetSeqTableFromSeqEntry()</a>, <a class="el" href="uncul__tax__tool_8cpp_source.html#l00708">CUnculTaxTool::LookupSuggestions()</a>, <a class="el" href="BioSource_8cpp_source.html#l01519">RemoveLineageSourceNotes()</a>, <a class="el" href="macro__fn__do_8cpp_source.html#l00285">CMacroFunction_RemoveOrgName::s_RemoveOrgName()</a>, <a class="el" href="uncul__tax__tool_8cpp_source.html#l00420">CUnculTaxTool::StandardFixes()</a>, <a class="el" href="validerror__bioseq_8cpp_source.html#l08714">CValidError_bioseq::ValidateSeqDescContext()</a>, <a class="el" href="validerror__descr_8cpp_source.html#l00061">CValidError_descr::ValidateSeqDescr()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00096">CStrainSerotypeInfluenza::x_AddToInfluenzaNames()</a>, <a class="el" href="create__defline_8cpp_source.html#l03260">CDeflineGenerator::x_AdjustProteinTitleSuffix()</a>, <a class="el" href="create__defline_8cpp_source.html#l03110">CDeflineGenerator::x_AdjustProteinTitleSuffixIdx()</a>, <a class="el" href="append__mod__to__org_8cpp_source.html#l00091">CAppendModToOrg::x_ApplyToBioSource()</a>, <a class="el" href="genus__species__fixup_8cpp_source.html#l00047">CGenusSpeciesFixup::x_ApplyToBioSource()</a>, <a class="el" href="gather__items_8cpp_source.html#l02361">CFlatGatherer::x_BiosourcesEqualForMergingPurposes()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00139">CStrainSerotypeInfluenza::x_FixupOrganismNames()</a>, <a class="el" href="orggeneral__panel_8cpp_source.html#l00389">COrgGeneralPanel::x_HasTaxnameChanged()</a>, <a class="el" href="indexer_8cpp_source.html#l01305">CBioseqIndex::x_InitSource()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00404">CStrainSerotypeInfluenza::x_IsParsableInfluenzaVirusName()</a>, <a class="el" href="create__defline_8cpp_source.html#l01264">CDeflineGenerator::x_SetBioSrc()</a>, <a class="el" href="objtools_2format_2context_8cpp_source.html#l00372">CBioseqContext::x_SetTaxname()</a>, <a class="el" href="create__defline_8cpp_source.html#l02383">CDeflineGenerator::x_SetTitleFromProtein()</a>, <a class="el" href="create__defline_8cpp_source.html#l02173">CDeflineGenerator::x_SetTitleFromProteinIdx()</a>, <a class="el" href="src__writer_8cpp_source.html#l00897">CSrcWriter::xGatherTaxname()</a>, and <a class="el" href="gff3__writer_8cpp_source.html#l01110">CGff3Writer::xWriteSequenceHeader()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a7f6e8c9c37fd2d28ac709446ad9b8b8f">◆ </a></span>HasSubtype()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::HasSubtype </td>
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<td class="paramtype"><a class="el" href="group__dataspec__NCBI__BioSource.html#ga1cec6ad346c14140cd52b5eb5262cbb3">CSubSource::TSubtype</a> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l02040">2040</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>.</p>
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<p class="reference">Referenced by <a class="el" href="cleanup_8cpp_source.html#l03857">CCleanup::ConvertSrcFeatsToSrcDescs()</a>, <a class="el" href="BioSource_8cpp_source.html#l01974">FixGenomeForQualifiers()</a>, <a class="el" href="biosource__tests_8cpp_source.html#l01804">SetEnvSampleFixAmplifiedPrimers()</a>, and <a class="el" href="biosample__util_8cpp_source.html#l01467">UpdateBiosourceFromBiosample()</a>.</p>
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<a id="a098211cadae9fdde896732c298e14d65"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a098211cadae9fdde896732c298e14d65">◆ </a></span>IsSetCommon()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetCommon </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00345">345</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00407">COrg_ref_Base::IsSetCommon()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="srcedit__util_8cpp_source.html#l02473">CSrcTableCommonNameColumn::GetFromBioSource()</a>, and <a class="el" href="indexer_8cpp_source.html#l01305">CBioseqIndex::x_InitSource()</a>.</p>
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<a id="ab679e7fa92a62242e6b814174a146037"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ab679e7fa92a62242e6b814174a146037">◆ </a></span>IsSetDivision()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetDivision </td>
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<td>(</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00395">395</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00159">COrg_ref::IsSetDivision()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="srcedit__util_8cpp_source.html#l02483">CSrcTableDivisionColumn::GetFromBioSource()</a>, <a class="el" href="newcleanupp_8cpp_source.html#l08593">IsBadSeqInstStrand()</a>, and <a class="el" href="biosample__chk_8cpp_source.html#l01293">s_IsEmptyBioSource()</a>.</p>
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<a id="a14a95b0ee3b6b951632cf9b4a335b859"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a14a95b0ee3b6b951632cf9b4a335b859">◆ </a></span>IsSetGcode()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetGcode </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00365">365</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00129">COrg_ref::IsSetGcode()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="newcleanupp_8cpp_source.html#l11523">CNewCleanup_imp::CdRegionEC()</a>, and <a class="el" href="Source__qual__choice_8cpp_source.html#l00104">CSource_qual_choice::GetLimitedSourceQualFromBioSource()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aa69676c8f17fc545e2c23342e44e616f">◆ </a></span>IsSetLineage()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetLineage </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00355">355</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00119">COrg_ref::IsSetLineage()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01900">AllowMatingTypeQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01868">AllowSexQualifier()</a>, <a class="el" href="orggeneral__panel_8cpp_source.html#l00411">COrgGeneralPanel::ApplyCommand()</a>, <a class="el" href="BioSource_8cpp_source.html#l01681">FixEnvironmentalSample()</a>, <a class="el" href="convert__cds__with__gaps__to__misc__feat_8cpp_source.html#l00493">CConvertBadCdsAndRnaToMiscFeat::getBacterialPartialNonextendable()</a>, <a class="el" href="BioSource_8cpp_source.html#l00522">GetBioprojectLocation()</a>, <a class="el" href="BioSource_8cpp_source.html#l00482">GetBioprojectType()</a>, <a class="el" href="convert__cds__with__gaps__to__misc__feat_8cpp_source.html#l00571">CConvertBadCdsAndRnaToMiscFeat::getCdsOverlap()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l02478">CSrcTableLineageColumn::GetFromBioSource()</a>, <a class="el" href="gene__qual__normalization_8cpp_source.html#l00154">CCleanup::GetNormalizableGeneQualPairs()</a>, <a class="el" href="convert__cds__with__gaps__to__misc__feat_8cpp_source.html#l00685">CConvertBadCdsAndRnaToMiscFeat::getRnaOverlap()</a>, <a class="el" href="discrepancy__context_8cpp_source.html#l00107">CDiscrepancyContext::HasLineage()</a>, <a class="el" href="newcleanupp_8cpp_source.html#l08593">IsBadSeqInstStrand()</a>, <a class="el" href="BioSource_8cpp_source.html#l01835">IsViral()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l00348">CBioSourceKind::operator=()</a>, <a class="el" href="BioSource_8cpp_source.html#l01519">RemoveLineageSourceNotes()</a>, <a class="el" href="adjust__consensus__splicesite_8cpp_source.html#l00362">CAdjustForConsensusSpliceSite::s_IsBioseqGood_Strict()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l00516">CValidError_imp::ValidateBioSource()</a>, <a class="el" href="validerror__bioseq_8cpp_source.html#l06071">CValidError_bioseq::ValidateSeqFeatContext()</a>, <a class="el" href="BioSource_8cpp_source.html#l01316">x_ShouldIgnoreNoteForBiosample()</a>, and <a class="el" href="validerror__bioseq_8cpp_source.html#l05091">CValidError_bioseq::x_ValidateCompletness()</a>.</p>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetMgcode </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00375">375</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00139">COrg_ref::IsSetMgcode()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="Source__qual__choice_8cpp_source.html#l00104">CSource_qual_choice::GetLimitedSourceQualFromBioSource()</a>.</p>
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<a id="a2e64953854871e2f1d2d09ff984e460b"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a2e64953854871e2f1d2d09ff984e460b">◆ </a></span>IsSetOrgMod()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetOrgMod </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00415">415</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="Org__ref_8cpp_source.html#l00169">COrg_ref::IsSetOrgMod()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="unit__test__uncultured__taxlookup_8cpp_source.html#l00516">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="sequence__tests_8cpp_source.html#l01464">CompareOrgModValue()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01008">GetSeqTableFromSeqEntry()</a>, <a class="el" href="macro__fn__aecr_8cpp_source.html#l00320">s_ResetModSubsrcQuals()</a>, <a class="el" href="validerror__bioseqset_8cpp_source.html#l00426">CValidError_bioseqset::ValidateNucProtSet()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00096">CStrainSerotypeInfluenza::x_AddToInfluenzaNames()</a>, <a class="el" href="BioSource_8cpp_source.html#l00879">x_GetOrgModNameValPairs()</a>, <a class="el" href="macro__fn__lookup_8cpp_source.html#l00634">CCulturedTool::x_RemoveIfFoundOrgModNote()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00168">CStrainSerotypeInfluenza::x_SplittingQualifiersAtCommas()</a>, and <a class="el" href="src__writer_8cpp_source.html#l01070">CSrcWriter::xGatherOrgModFeat()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a8a8127af21d6df36c7e7b892094b2b1c">◆ </a></span>IsSetOrgname()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetOrgname </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00405">405</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="Org__ref___8hpp_source.html#l00529">COrg_ref_Base::IsSetOrgname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01900">AllowMatingTypeQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01868">AllowSexQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01392">AutoFix()</a>, <a class="el" href="fta__src_8cpp_source.html#l03049">CheckMetagenome()</a>, <a class="el" href="BioSource_8cpp_source.html#l01681">FixEnvironmentalSample()</a>, <a class="el" href="BioSource_8cpp_source.html#l00647">GetDisableStrainForwarding()</a>, <a class="el" href="BioSource_8cpp_source.html#l01519">RemoveLineageSourceNotes()</a>, <a class="el" href="BioSource_8cpp_source.html#l01772">RemoveNullTerms()</a>, <a class="el" href="BioSource_8cpp_source.html#l01636">RemoveOrgMod()</a>, <a class="el" href="BioSource_8cpp_source.html#l01949">RemoveUnexpectedViralQualifiers()</a>, <a class="el" href="macro__fn__aecr_8cpp_source.html#l05799">CMacroFunction_AddorSetContElement::s_AddSrcOrgMod()</a>, <a class="el" href="align__row_8cpp_source.html#l01060">s_GetOrgModNatHost()</a>, <a class="el" href="biosample__chk_8cpp_source.html#l01293">s_IsEmptyBioSource()</a>, <a class="el" href="macro__fn__aecr_8cpp_source.html#l02637">s_SetBioSourceField()</a>, <a class="el" href="BioSource_8cpp_source.html#l00621">SetDisableStrainForwarding()</a>, <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>, <a class="el" href="create__defline_8cpp_source.html#l03260">CDeflineGenerator::x_AdjustProteinTitleSuffix()</a>, <a class="el" href="indexer_8cpp_source.html#l01590">CBioseqIndex::x_InitDescs()</a>, <a class="el" href="indexer_8cpp_source.html#l01305">CBioseqIndex::x_InitSource()</a>, <a class="el" href="create__defline_8cpp_source.html#l01264">CDeflineGenerator::x_SetBioSrc()</a>, <a class="el" href="create__defline_8cpp_source.html#l00612">CDeflineGenerator::x_SetFlags()</a>, <a class="el" href="objtools_2format_2context_8cpp_source.html#l00372">CBioseqContext::x_SetTaxname()</a>, <a class="el" href="BioSource_8cpp_source.html#l01316">x_ShouldIgnoreNoteForBiosample()</a>, and <a class="el" href="gff3__writer_8cpp_source.html#l01110">CGff3Writer::xWriteSequenceHeader()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ab4b4be1e709dda0727929add0c178067">◆ </a></span>IsSetPgcode()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetPgcode </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<td class="paramname"></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00385">385</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="Org__ref_8cpp_source.html#l00149">COrg_ref::IsSetPgcode()</a>.</p>
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<a id="acf6be240702bcda0c86f434d7f4be5b1"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#acf6be240702bcda0c86f434d7f4be5b1">◆ </a></span>IsSetTaxname()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsSetTaxname </td>
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<td>(</td>
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<td class="paramtype">void </td>
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<td class="paramname"></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00335">335</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="Org__ref___8hpp_source.html#l00360">COrg_ref_Base::IsSetTaxname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="export__table_8cpp_source.html#l00216">CExportTableDlg::AddBioSource()</a>, <a class="el" href="add__flu__comments_8cpp_source.html#l00172">CAddFluComments::AddBioSource()</a>, <a class="el" href="uncul__tax__tool_8cpp_source.html#l00809">CUnculTaxTool::AddBioSource()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01342">CSrcTaxnameAfterBinomialColumn::ClearInBioSource()</a>, <a class="el" href="capitalization__string_8cpp_source.html#l00758">FindOrgNames()</a>, <a class="el" href="BioSource_8cpp_source.html#l01681">FixEnvironmentalSample()</a>, <a class="el" href="BioSource_8cpp_source.html#l00811">GetNameValPairs()</a>, <a class="el" href="srcedit__util_8cpp_source.html#l01008">GetSeqTableFromSeqEntry()</a>, <a class="el" href="uncul__tax__tool_8cpp_source.html#l00708">CUnculTaxTool::LookupSuggestions()</a>, <a class="el" href="biosample__chk_8cpp_source.html#l01293">s_IsEmptyBioSource()</a>, <a class="el" href="macro__fn__do_8cpp_source.html#l00285">CMacroFunction_RemoveOrgName::s_RemoveOrgName()</a>, <a class="el" href="biosample__util_8cpp_source.html#l01467">UpdateBiosourceFromBiosample()</a>, <a class="el" href="validerror__bioseq_8cpp_source.html#l08714">CValidError_bioseq::ValidateSeqDescContext()</a>, <a class="el" href="validerror__descr_8cpp_source.html#l00061">CValidError_descr::ValidateSeqDescr()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l01249">CValidError_imp::ValidateSubSource()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00096">CStrainSerotypeInfluenza::x_AddToInfluenzaNames()</a>, <a class="el" href="create__defline_8cpp_source.html#l03260">CDeflineGenerator::x_AdjustProteinTitleSuffix()</a>, <a class="el" href="create__defline_8cpp_source.html#l03110">CDeflineGenerator::x_AdjustProteinTitleSuffixIdx()</a>, <a class="el" href="append__mod__to__org_8cpp_source.html#l00091">CAppendModToOrg::x_ApplyToBioSource()</a>, <a class="el" href="genus__species__fixup_8cpp_source.html#l00047">CGenusSpeciesFixup::x_ApplyToBioSource()</a>, <a class="el" href="gather__items_8cpp_source.html#l02361">CFlatGatherer::x_BiosourcesEqualForMergingPurposes()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00139">CStrainSerotypeInfluenza::x_FixupOrganismNames()</a>, <a class="el" href="orggeneral__panel_8cpp_source.html#l00389">COrgGeneralPanel::x_HasTaxnameChanged()</a>, <a class="el" href="indexer_8cpp_source.html#l01305">CBioseqIndex::x_InitSource()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00404">CStrainSerotypeInfluenza::x_IsParsableInfluenzaVirusName()</a>, <a class="el" href="BioSource_8cpp_source.html#l01268">x_RemoveNameElementDiffs()</a>, <a class="el" href="create__defline_8cpp_source.html#l01264">CDeflineGenerator::x_SetBioSrc()</a>, <a class="el" href="objtools_2format_2context_8cpp_source.html#l00372">CBioseqContext::x_SetTaxname()</a>, <a class="el" href="create__defline_8cpp_source.html#l02383">CDeflineGenerator::x_SetTitleFromProtein()</a>, <a class="el" href="create__defline_8cpp_source.html#l02173">CDeflineGenerator::x_SetTitleFromProteinIdx()</a>, <a class="el" href="strain__serotype__influenza_8cpp_source.html#l00257">CStrainSerotypeInfluenza::x_TrimmingOrganismNames()</a>, and <a class="el" href="src__writer_8cpp_source.html#l00897">CSrcWriter::xGatherTaxname()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a79927573bb80bbbca6fb0e1dd9662706">◆ </a></span>IsStopWord()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsStopWord </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<td class="paramname"><em>value</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01382">1382</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="static__set_8hpp_source.html#l00647">CStaticArraySearchBase< KeyValueGetter, KeyCompare >::end()</a>, <a class="el" href="static__set_8hpp_source.html#l00680">CStaticArraySearchBase< KeyValueGetter, KeyCompare >::find()</a>, <a class="el" href="BioSource_8cpp.html#af690dd43c34e24bea95431bb9dd82da8">s_StopWordsSet</a>, and <a class="el" href="pointer_8h_source.html#l01227">rapidjson::value</a>.</p>
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<p class="reference">Referenced by <a class="el" href="biosample__util_8hpp_source.html#l00103">CBiosampleFieldDiff::GetSampleVal()</a>, <a class="el" href="biosample__util_8hpp_source.html#l00102">CBiosampleFieldDiff::GetSrcVal()</a>, <a class="el" href="compare__with__biosample_8cpp_source.html#l00445">CCompareWithBiosample::OnClickOk()</a>, <a class="el" href="biosample__util_8cpp_source.html#l00418">CBiosampleFieldDiff::Print()</a>, <a class="el" href="BioSource_8cpp_source.html#l00842">s_iCompareNameVals()</a>, <a class="el" href="BioSource_8cpp_source.html#l01033">ShouldIgnoreConflict()</a>, <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00672">x_RemoveStopWords()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a8815d82fa2a6dc89bb973925ef24504d">◆ </a></span>IsViral() <span class="overload">[1/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsViral </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01835">1835</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource_8cpp_source.html#l00360">GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01878">AllowMatingTypeQualifier()</a>, <a class="el" href="BioSource_8cpp_source.html#l01845">AllowSexQualifier()</a>, and <a class="el" href="BioSource_8cpp_source.html#l01949">RemoveUnexpectedViralQualifiers()</a>.</p>
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<a id="afdbe3474e6c1363046d9eb18dd446fa1"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#afdbe3474e6c1363046d9eb18dd446fa1">◆ </a></span>IsViral() <span class="overload">[2/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::IsViral </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<td class="paramname"><em>lineage</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01825">1825</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l01206">NStr::eNocase</a>, and <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a6f5592e6b8103b956487e142d64f2744">◆ </a></span>MakeCommon()</h2>
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<td class="memname"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCBioSource.html">CBioSource</a> > CBioSource::MakeCommon </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l02022">2022</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00280">COrg_ref::MakeCommon()</a>, <a class="el" href="BioSource_8cpp_source.html#l01989">MakeCommonExceptOrg()</a>, <a class="el" href="ctools_2ctransition_2ncbistd_8hpp_source.html#l00225">NULL</a>, and <a class="el" href="BioSource___8cpp_source.html#l00108">CBioSource_Base::SetOrg()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01070">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a288243e3fb20173a06d7a963a4c72ad0">◆ </a></span>MakeCommonExceptOrg()</h2>
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<td class="memname"><a class="el" href="classCRef.html">CRef</a>< <a class="el" href="classCBioSource.html">CBioSource</a> > CBioSource::MakeCommonExceptOrg </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01989">1989</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="serialobject_8cpp_source.html#l00084">CSerialObject::Assign()</a>, <a class="el" href="BioSource_8hpp_source.html#l00203">CBioSource()</a>, <a class="el" href="serialobject_8cpp_source.html#l00102">CSerialObject::Equals()</a>, <a class="el" href="BioSource___8hpp_source.html#l00588">CBioSource_Base::GetPcr_primers()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00576">CBioSource_Base::IsSetPcr_primers()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="BioSource_8cpp_source.html#l01985">MAKE_COMMON_INT</a>, <a class="el" href="BioSource___8cpp_source.html#l00124">CBioSource_Base::SetPcr_primers()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l02022">MakeCommon()</a>, and <a class="el" href="source__edit_8cpp_source.html#l00162">MakeCommonBioSource()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ac1d9ac3cb1fe97a29d9afb0daccbd6b5">◆ </a></span>operator=()</h2>
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<td class="memname"><a class="el" href="classCBioSource.html">CBioSource</a>& CBioSource::operator= </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<td class="paramname"><em>value</em></td><td>)</td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<h2 class="memtitle"><span class="permalink"><a href="#a4281ae405d9f3d0629e83a120e0b549a">◆ </a></span>RemoveCultureNotes()</h2>
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<td class="memname">void CBioSource::RemoveCultureNotes </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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<td class="paramname"><em>is_species_level</em> = <code><a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a41f9c5fb8b08eb5dc3edce4dcb37fee7">true</a></code></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01428">1428</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="SubSource___8hpp_source.html#l00128">CSubSource_Base::eSubtype_other</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="SubSource_8cpp_source.html#l05247">CSubSource::RemoveCultureNotes()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01215">BOOST_AUTO_TEST_CASE()</a>, and <a class="el" href="util__cmds_8cpp_source.html#l00843">GetRmCultureNotesCommand()</a>.</p>
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<a id="a0c4a6d2392458f07008bf79ee3788913"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a0c4a6d2392458f07008bf79ee3788913">◆ </a></span>RemoveLineageSourceNotes()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveLineageSourceNotes </td>
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<td>(</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01519">1519</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
<p class="reference">References <a class="el" href="ncbimisc_8hpp_source.html#l01532">ArraySize()</a>, <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="OrgMod___8hpp_source.html#l00125">COrgMod_Base::eSubtype_other</a>, <a class="el" href="SubSource___8hpp_source.html#l00128">CSubSource_Base::eSubtype_other</a>, <a class="el" href="BioSource_8cpp_source.html#l00360">GetLineage()</a>, <a class="el" href="SubSource___8hpp_source.html#l00350">CSubSource_Base::GetName()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="OrgMod___8hpp_source.html#l00347">COrgMod_Base::GetSubname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="OrgMod___8hpp_source.html#l00307">COrgMod_Base::GetSubtype()</a>, <a class="el" href="SubSource___8hpp_source.html#l00310">CSubSource_Base::GetSubtype()</a>, <a class="el" href="sequence_8cpp_source.html#l00274">GetTaxId()</a>, <a class="el" href="BioSource_8cpp_source.html#l00340">GetTaxname()</a>, <a class="el" href="lex_8newick_8cpp_source.html#l01456">i</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, <a class="el" href="SubSource___8hpp_source.html#l00338">CSubSource_Base::IsSetName()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="OrgMod___8hpp_source.html#l00335">COrgMod_Base::IsSetSubname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="OrgMod___8hpp_source.html#l00288">COrgMod_Base::IsSetSubtype()</a>, <a class="el" href="SubSource___8hpp_source.html#l00291">CSubSource_Base::IsSetSubtype()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, <a class="el" href="BioSource_8cpp_source.html#l01485">s_DoesTextContainOnlyTheseWords()</a>, <a class="el" href="BioSource_8cpp_source.html#l01475">s_GetWordListFromText()</a>, <a class="el" href="BioSource_8cpp_source.html#l01450">s_SpecialLineageWords</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l01115">ZERO_TAX_ID</a>.</p>
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||
<p class="reference">Referenced by <a class="el" href="unit__test__validator_8cpp_source.html#l21749">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a6a4fbbe9fff6a567175e98874e065d87">◆ </a></span>RemoveNullTerms()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveNullTerms </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01772">1772</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05347">NStr::EqualNocase()</a>, <a class="el" href="SubSource___8hpp_source.html#l00114">CSubSource_Base::eSubtype_collection_date</a>, <a class="el" href="SubSource___8hpp_source.html#l00107">CSubSource_Base::eSubtype_country</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="newcleanupp_8cpp_source.html#l01550">CNewCleanup_imp::BiosourceBC()</a>, and <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01718">BOOST_AUTO_TEST_CASE()</a>.</p>
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<a id="a9b14df39d8eab2b7babf9a1b635584da"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a9b14df39d8eab2b7babf9a1b635584da">◆ </a></span>RemoveOrgMod() <span class="overload">[1/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveOrgMod </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01636">1636</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, and <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="compare__with__biosample_8cpp_source.html#l00445">CCompareWithBiosample::OnClickOk()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>.</p>
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<a id="a87f05a67df982330afe655610ae28ba7"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a87f05a67df982330afe655610ae28ba7">◆ </a></span>RemoveOrgMod() <span class="overload">[2/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveOrgMod </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td>
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<td class="paramname"><em>subtype</em>, </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01658">1658</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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||
<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#afa22c44b27a02b0b5f416042511d7e0e">◆ </a></span>RemoveSubSource() <span class="overload">[1/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveSubSource </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01591">1591</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="compare__with__biosample_8cpp_source.html#l00445">CCompareWithBiosample::OnClickOk()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00704">UpdateWithBioSample()</a>.</p>
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<a id="ae82ed6358a3b81d72e4584e06d4f39cc"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ae82ed6358a3b81d72e4584e06d4f39cc">◆ </a></span>RemoveSubSource() <span class="overload">[2/2]</span></h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveSubSource </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="group__mdb__copy.html#ga10cfb7d4996b006d5675b53b9c7f0fb5">int</a> </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01613">1613</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="BioSource___8cpp_source.html#l00113">CBioSource_Base::ResetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#add4f5c63e90716b7d48b5d9ce2571fac">◆ </a></span>RemoveUnexpectedViralQualifiers()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::RemoveUnexpectedViralQualifiers </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01949">1949</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ctre-unicode_8hpp_source.html#l00525">ctll::empty()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l01835">IsViral()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, and <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01803">BOOST_AUTO_TEST_CASE()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ac395911ec25f3988ef65f5ee3feb991a">◆ </a></span>SetDisableStrainForwarding()</h2>
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<td class="memname">void CBioSource::SetDisableStrainForwarding </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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<td class="paramname"><em>val</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00621">621</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ncbistr_8cpp_source.html#l02882">NStr::Find()</a>, <a class="el" href="OrgName___8hpp_source.html#l00792">COrgName_Base::GetAttrib()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00541">COrg_ref_Base::GetOrgname()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l00619">kDisableStrainForwardAttrib</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l00123">kEmptyStr</a>, <a class="el" href="ncbistr_8cpp_source.html#l03396">NStr::ReplaceInPlace()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="unit__test__validator_8cpp_source.html#l21502">BOOST_AUTO_TEST_CASE()</a>, and <a class="el" href="util__cmds_8cpp_source.html#l00770">GetChangeStrainForwardingCommand()</a>.</p>
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<a id="a2a57f0c4535034779427fc81ff7c01dc"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a2a57f0c4535034779427fc81ff7c01dc">◆ </a></span>ShouldIgnoreConflict()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::ShouldIgnoreConflict </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> & </td>
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<td class="paramname"><em>src_val</em>, </td>
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<td class="paramtype"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> </td>
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<td class="paramname"><em>sample_val</em>, </td>
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||
<td class="paramname"><em>is_local_copy</em> = <code><a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a></code> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01033">1033</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ncbimisc_8hpp_source.html#l01532">ArraySize()</a>, <a class="el" href="OrgMod_8cpp_source.html#l01069">COrgMod::AutoFix()</a>, <a class="el" href="SubSource_8cpp_source.html#l05158">CSubSource::AutoFix()</a>, <a class="el" href="SubSource_8cpp_source.html#l00285">CSubSource::DateFromCollectionDate()</a>, <a class="el" href="BioSource_8cpp_source.html#l00975">eConflictIgnoreAll</a>, <a class="el" href="BioSource_8cpp_source.html#l00977">eConflictIgnoreMissingInBioSample</a>, <a class="el" href="BioSource_8cpp_source.html#l00976">eConflictIgnoreMissingInBioSource</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05424">NStr::EndsWith()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05378">NStr::Equal()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05319">NStr::EqualCase()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05347">NStr::EqualNocase()</a>, <a class="el" href="serialobject_8cpp_source.html#l00102">CSerialObject::Equals()</a>, <a class="el" href="OrgMod_8cpp_source.html#l00062">COrgMod::GetSubtypeValue()</a>, <a class="el" href="SubSource_8cpp_source.html#l00126">CSubSource::GetSubtypeValue()</a>, <a class="el" href="lex_8newick_8cpp_source.html#l01456">i</a>, <a class="el" href="BioSource_8cpp_source.html#l00983">ignoreconflict::ignore_type</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="SubSource_8cpp_source.html#l01296">CSubSource::IsCorrectLatLonFormat()</a>, <a class="el" href="BioSource_8cpp_source.html#l01382">IsStopWord()</a>, <a class="el" href="ftds100_2freetds_2tds_2sec__negotiate__gnutls_8h_source.html#l00210">label</a>, <a class="el" href="ncbistr_8cpp_source.html#l03396">NStr::ReplaceInPlace()</a>, <a class="el" href="BioSource_8cpp_source.html#l00946">s_MayIgnoreCase()</a>, <a class="el" href="BioSource_8cpp_source.html#l01017">s_SameExceptPrecision()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00987">sIgnoreConflictList</a>.</p>
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<p class="reference">Referenced by <a class="el" href="biosample__util_8cpp_source.html#l01078">AddBioSourceToAttributes()</a>, <a class="el" href="seqfeatdata__unit__test_8cpp_source.html#l01978">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="BioSource_8cpp_source.html#l01154">CompareValLists()</a>, and <a class="el" href="BioSource_8cpp_source.html#l01207">GetFieldDiffsFromNameValLists()</a>.</p>
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<a id="ab690c2a2bf8b465236b461ff63aeb0aa"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#ab690c2a2bf8b465236b461ff63aeb0aa">◆ </a></span>UpdateWithBioSample()</h2>
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<td class="memname">void CBioSource::UpdateWithBioSample </td>
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<td>(</td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<td class="paramname"><em>biosample</em>, </td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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<td class="paramname"><em>force</em>, </td>
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<td class="paramtype"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> </td>
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<td class="paramname"><em>is_local_copy</em> = <code><a class="el" href="ftds14_2freetds_2freetds_2bool_8h.html#a65e9886d74aaee76545e83dd09011727">false</a></code> </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00704">704</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource_8cpp_source.html#l01392">AutoFix()</a>, <a class="el" href="BioSource_8cpp_source.html#l00693">BiosampleDiffsOkForUpdate()</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05347">NStr::EqualNocase()</a>, <a class="el" href="OrgMod___8hpp_source.html#l00124">COrgMod_Base::eSubtype_old_name</a>, <a class="el" href="group__GenClassSupport.html#ggae820720c5bbb78691337c9dfa21adf60a64c3acc11ffdb1be30ea339290bd1508">eUnknown</a>, <a class="el" href="BioSource_8cpp_source.html#l01327">GetBiosampleDiffs()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="OrgMod_8cpp_source.html#l00062">COrgMod::GetSubtypeValue()</a>, <a class="el" href="SubSource_8cpp_source.html#l00126">CSubSource::GetSubtypeValue()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l01382">IsStopWord()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="njn__integer_8hpp_source.html#l00067">mod()</a>, <a class="el" href="ncbiexpt_8hpp_source.html#l00704">NCBI_THROW</a>, <a class="el" href="SubSource_8cpp_source.html#l00231">CSubSource::NeedsNoText()</a>, <a class="el" href="BioSource_8cpp_source.html#l01636">RemoveOrgMod()</a>, <a class="el" href="BioSource_8cpp_source.html#l01591">RemoveSubSource()</a>, <a class="el" href="SubSource___8hpp_source.html#l00359">CSubSource_Base::SetName()</a>, <a class="el" href="BioSource___8hpp_source.html#l00518">CBioSource_Base::SetOrg()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>, <a class="el" href="SubSource___8hpp_source.html#l00319">CSubSource_Base::SetSubtype()</a>, <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00093">COrg_ref::SetTaxId()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00381">COrg_ref_Base::SetTaxname()</a>, and <a class="el" href="ncbimisc_8hpp_source.html#l01111">TAX_ID_FROM</a>.</p>
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||
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||
<p class="reference">Referenced by <a class="el" href="unit__test__biosample__chk_8cpp_source.html#l00098">BOOST_AUTO_TEST_CASE()</a>, and <a class="el" href="biosample__chk_8cpp_source.html#l01299">CBiosampleChkApp::UpdateBioSource()</a>.</p>
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<a id="a1a5313a3c685bf92b2b2e5977ed146ff"></a>
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<h2 class="memtitle"><span class="permalink"><a href="#a1a5313a3c685bf92b2b2e5977ed146ff">◆ </a></span>x_ClearCoordinatedBioSampleOrgMods()</h2>
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<td class="memname">void CBioSource::x_ClearCoordinatedBioSampleOrgMods </td>
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<h2 class="memtitle"><span class="permalink"><a href="#a5ccb5c3d57f90a45afd89372fe1ca9c5">◆ </a></span>x_ClearCoordinatedBioSampleSubSources()</h2>
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<td class="memname">void CBioSource::x_ClearCoordinatedBioSampleSubSources </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00790">790</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="BioSource_8cpp_source.html#l00658">s_MustCopy()</a>, and <a class="el" href="BioSource___8hpp_source.html#l00545">CBioSource_Base::SetSubtype()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ab88d779bfc1ca5e9475af75c377498d7">◆ </a></span>x_GetOrgModNameValPairs()</h2>
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<td class="memname"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">CBioSource::TNameValList</a> CBioSource::x_GetOrgModNameValPairs </td>
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<td>(</td>
|
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00879">879</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="OrgMod___8hpp_source.html#l00125">COrgMod_Base::eSubtype_other</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="OrgMod_8cpp_source.html#l00108">COrgMod::GetSubtypeName()</a>, <a class="el" href="BioSource_8cpp_source.html#l00415">IsSetOrgMod()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="BioSource_8cpp_source.html#l00806">kOrgModNote</a>, <a class="el" href="ftds100_2freetds_2tds_2sec__negotiate__gnutls_8h_source.html#l00210">label</a>, <a class="el" href="BioSource_8cpp_source.html#l00868">s_CompareNameVals()</a>, and <a class="el" href="compile__time_8hpp_source.html#l00173">ct::sort()</a>.</p>
|
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|
||
<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l00811">GetNameValPairs()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a985049d2f2dc5615dbd34b8ca06704c7">◆ </a></span>x_GetSubtypeNameValPairs()</h2>
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<td class="memname"><a class="el" href="classCBioSource.html#a9b5a948b61cab056750a93db2ea0d584">CBioSource::TNameValList</a> CBioSource::x_GetSubtypeNameValPairs </td>
|
||
<td>(</td>
|
||
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00900">900</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="SubSource___8hpp_source.html#l00128">CSubSource_Base::eSubtype_other</a>, <a class="el" href="BioSource___8hpp_source.html#l00539">CBioSource_Base::GetSubtype()</a>, <a class="el" href="SubSource_8cpp_source.html#l00183">CSubSource::GetSubtypeName()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="BioSource___8hpp_source.html#l00527">CBioSource_Base::IsSetSubtype()</a>, <a class="el" href="ncbimisc_8hpp_source.html#l00815">ITERATE</a>, <a class="el" href="BioSource_8cpp_source.html#l00807">kSubSrcNote</a>, <a class="el" href="ftds100_2freetds_2tds_2sec__negotiate__gnutls_8h_source.html#l00210">label</a>, <a class="el" href="SubSource_8cpp_source.html#l00231">CSubSource::NeedsNoText()</a>, <a class="el" href="BioSource_8cpp_source.html#l00868">s_CompareNameVals()</a>, <a class="el" href="compile__time_8hpp_source.html#l00173">ct::sort()</a>, <a class="el" href="sljitNativeS390X_8c_source.html#l00613">st()</a>, and <a class="el" href="table2asn__context_8hpp.html#a4a166b59119c660536919d528607e787a3a6d0284e743dc4a9b86f97d6dd1a3bf">val</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l00811">GetNameValPairs()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#af2d3087248c23b44a22aee6cec215565">◆ </a></span>x_InitStopWords()</h2>
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<td class="memname"><a class="el" href="Genetic__code__table_8cpp.html#aa261b98e7b0037f2a9f13cbb4b8539d7">static</a> void CBioSource::x_InitStopWords </td>
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<h2 class="memtitle"><span class="permalink"><a href="#a61665a6f3a7a1a92818924b079faa253">◆ </a></span>x_RemoveNameElementDiffs()</h2>
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<td class="memname">void CBioSource::x_RemoveNameElementDiffs </td>
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<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="classCBioSource.html">CBioSource</a> & </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01268">1268</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ncbistr_8cpp_source.html#l02882">NStr::Find()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00372">COrg_ref_Base::GetTaxname()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00335">IsSetTaxname()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00360">COrg_ref_Base::IsSetTaxname()</a>, <a class="el" href="ftds100_2freetds_2freetds_2dlist_8tmpl_8h_source.html#l00090">remove()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00968">s_IsTaxNameElement()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ab112947e015b909a0884ddc9eae72155">◆ </a></span>x_RemoveStopWords()</h2>
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<td class="memname">void CBioSource::x_RemoveStopWords </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l00672">672</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="OrgName___8hpp_source.html#l00839">COrgName_Base::GetMod()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00541">COrg_ref_Base::GetOrgname()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00372">COrg_ref_Base::GetTaxname()</a>, <a class="el" href="Org__ref_8cpp_source.html#l00169">COrg_ref::IsSetOrgMod()</a>, <a class="el" href="Org__ref___8hpp_source.html#l00360">COrg_ref_Base::IsSetTaxname()</a>, <a class="el" href="BioSource_8cpp_source.html#l01382">IsStopWord()</a>, <a class="el" href="Org__ref___8cpp_source.html#l00052">COrg_ref_Base::ResetTaxname()</a>, and <a class="el" href="Org__ref___8cpp_source.html#l00087">COrg_ref_Base::SetOrgname()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aa0e7b7a4dd164b510dec5098664c78b3">◆ </a></span>x_ShouldIgnoreNoteForBiosample()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CBioSource::x_ShouldIgnoreNoteForBiosample </td>
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<p class="definition">Definition at line <a class="el" href="BioSource_8cpp_source.html#l01316">1316</a> of file <a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a>.</p>
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<p class="reference">References <a class="el" href="ncbistr_8cpp_source.html#l02882">NStr::Find()</a>, <a class="el" href="BioSource_8cpp_source.html#l00360">GetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00509">CBioSource_Base::GetOrg()</a>, <a class="el" href="BioSource_8cpp_source.html#l00410">GetOrgname()</a>, <a class="el" href="BioSource_8cpp_source.html#l00355">IsSetLineage()</a>, <a class="el" href="BioSource___8hpp_source.html#l00497">CBioSource_Base::IsSetOrg()</a>, and <a class="el" href="BioSource_8cpp_source.html#l00405">IsSetOrgname()</a>.</p>
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<p class="reference">Referenced by <a class="el" href="BioSource_8cpp_source.html#l01327">GetBiosampleDiffs()</a>.</p>
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<hr/>The documentation for this class was generated from the following files:<ul>
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<li>include/objects/seqfeat/<a class="el" href="BioSource_8hpp_source.html">BioSource.hpp</a></li>
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<li>src/objects/seqfeat/<a class="el" href="BioSource_8cpp_source.html">BioSource.cpp</a></li>
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<address style="align: right;"><small>Modified on Fri Sep 20 14:57:57 2024 by modify_doxy.py rev. 669887</small></address>
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