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30 lines
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<title>Sparse-align</title>
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<h3>Sparse-align</h3><pre>Defined in file <a href="seqalign.asn.html">seqalign.asn</a>
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C++ class: <a href="../doxyhtml/classCSparse__align.html">CSparse_align</a>
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Sparse-align ::= SEQUENCE {
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first-id <a href="Seq-id.html">Seq-id</a>,
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second-id <a href="Seq-id.html">Seq-id</a>,
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numseg INTEGER, --number of segments
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first-starts SEQUENCE OF INTEGER , --starts on the first sequence [numseg]
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second-starts SEQUENCE OF INTEGER , --starts on the second sequence [numseg]
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lens SEQUENCE OF INTEGER , --lengths of segments [numseg]
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second-strands SEQUENCE OF <a href="Na-strand.html">Na-strand</a> OPTIONAL ,
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-- per-segment scores
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seg-scores SET OF <a href="Score.html">Score</a> OPTIONAL
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}</pre>
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