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<p>In case you would like to credit the NCBI Virus resource as part of your work, include this URL <a href="../..">https://www.ncbi.nlm.nih.gov/labs/virus/vssi/#/</a> in the website citation formatted according to your publisher's recommendations.</p>
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<h2 id="how-to-cite-sarscov2-variants-ov">How to Cite SARS-CoV-2 Variants Overview?</h2>
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<p>NCBI SARS-CoV-2 Variants Overview page can be cited as a website, by including this URL <a href="../../../../../activ">https://www.ncbi.nlm.nih.gov/activ</a> in a website citation formatted according to specific publisher’s recommendations.</p>
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<h2 id="related-publications">Other related publications by NCBI Virus team</h2>
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<div>
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<table class="usa-table-borderless">
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<thead>
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<tr>
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<th scope="col" width="40%">Title</th>
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<th scope="col" width="30%">Authors</th>
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<th scope="col" width="30%">Read Online</th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<th scope="row"><b>Virus Variation Resource - improved response to emergent viral outbreaks.</b></th>
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||
<td>Hatcher EL, Zhdanov SA, Bao Y, Blinkova O, Nawrocki EP, Ostapchuck Y, Schaffer AA, Brister JR.</td>
|
||
<td><a href="/../pubmed/27899678">Nucleic Acids Res. 2017 Jan 4;45(D1):D482-D490. doi: 10.1093/nar/gkw1065. Epub 2016 Nov 28.</a></td>
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||
</tr>
|
||
<tr>
|
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<th scope="row"><b>Minimum Information about an Uncultivated Virus Genome (MIUViG).</b></th>
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<td scope="col">Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, et al.</td>
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<td scope="col"><a href="/../pubmed/30556814"> Nat Biotechnol. 2018 Dec 17. doi: 10.1038/nbt.4306.</a></td>
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</tr>
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<tr>
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<th scope="row"><b>Overlapping genes and the proteins they encode differ significantly in their sequence composition from non-overlapping genes.</b></th>
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||
<td scope="col">Pavesi A, Vianelli A, Chirico N, Bao Y, Blinkova O, et al.</td>
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<td scope="col"><a href="/../pubmed/30339683">PLoS One. 2018 Oct 19;13(10):e0202513.</a></td>
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||
</tr>
|
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<tr>
|
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<th scope="row"><b>How to Name and Classify Your Phage: An Informal Guide.</b></th>
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||
<td scope="col">Adriaenssens E, Brister JR.</td>
|
||
<td scope="col"><a href="/../pubmed/28368359">Viruses. 2017 Apr 3;9(4). pii: E70.</a></td>
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</tr>
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<tr>
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<th scope="row"><b>Consensus statement: Virus taxonomy in the age of metagenomics.</b></th>
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<td scope="col">Simmonds P, Adams MJ, Benkő M, Breitbart M, Brister JR, et al.</td>
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<td scope="col"><a href="/../pubmed/28134265">Nat Rev Microbiol. 2017 Mar;15(3):161-168.</a></td>
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</tr>
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<tr>
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<th scope="row"><b>NCBI will no longer make taxonomy identifiers for individual influenza strains on January 15, 2018.</b></th>
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<td scope="col">Hatcher E, Bao Y, Amedeo P, Blinkova O, Cochrane G, et al.</td>
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<td scope="col"><a href="https://peerj.com/preprints/3428/">PeerJ Preprints.</a></td>
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</tr>
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<tr>
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<th scope="row"><b>NCBI viral genomes resource.</b></th>
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<td scope="col">Brister JR, Ako-Adjei D, Bao Y, Blinkova O.</td>
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<td scope="col"><a href="/../pubmed/25428358">Nucleic Acids Res. 2015 Jan;43(Database issue):D571-7. </a></td>
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</tr>
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<tr>
|
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<th scope="row"><b>HIV-1, human interaction database: current status and new features.</b></th>
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<td scope="col">Ako-Adjei D, Fu W, Wallin C, Katz KS, Song G, Darji D, et al.</td>
|
||
<td scope="col"><a href="/../pubmed/25378338">Nucleic Acids Res. 2015 Jan;43(Database issue):D566-70.</a></td>
|
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</tr>
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<tr>
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<th scope="row"><b>The Influenza Virus Resource at the National Center for Biotechnology Information.</b></th>
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||
<td scope="col">Bao Y., P. Bolotov, D. Dernovoy, B. Kiryutin, L. Zaslavsky, et al.</td>
|
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<td scope="col"><a href="/../pubmed/17942553">J. Virol. 2008 Jan;82(2):596-601.</a></td>
|
||
</tr>
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<tr>
|
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<th scope="row"><b>Visualization of large influenza virus sequence datasets using adaptively aggregated trees with sampling-based subscale representation.</b></th>
|
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<td scope="col">Zaslavsky L, Y. Bao and T. A. Tatusova.</td>
|
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<td scope="col"><a href="/../pubmed/18485197">BMC Bioinformatics, 2008; 9:237.</a></td>
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</tr>
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<tr>
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<th scope="row"><b>Accelerating the neighbor-joining algorithm using the adaptive bucket data structure.</b></th>
|
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<td scope="col">Zaslavsky L. and Tatusova T.</td>
|
||
<td scope="col"><a href="http://link.springer.com/chapter/10.1007/978-3-540-79450-9_12">Bioinformatics Research and Applications. Lecture Notes in Computer Science, Springer-Verlag, 2008; 4983:122-133.</a></td>
|
||
</tr>
|
||
<tr>
|
||
<th scope="row"><b>Multiresolution approaches to representation and visualization of large influenza virus sequence datasets.</b></th>
|
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<td scope="col">Zaslavsky L, Bao Y and Tatusova T.</td>
|
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<td scope="col"><a href="/../genomes/FLU/IEEE.pdf">IEEE International Conference on Bioinformatics and Biomedicine. 2007.</a></td>
|
||
</tr>
|
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<tr>
|
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<th scope="row"><b>FLAN: a web server for influenza virus genome annotation.</b></th>
|
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<td scope="col">Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Tatusova T.</td>
|
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<td scope="col"><a href="/../pubmed/17545199">Nucleic Acids Research. 2007 Jul 1; 35 (Web Server issue): W280-4.</a></td>
|
||
</tr>
|
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<tr>
|
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<th scope="row"><b>An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets.</b></th>
|
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<td scope="col">Zaslavsky L, Bao Y, and Tatusova T.</td>
|
||
<td scope="col"><a href="http://link.springer.com/chapter/10.1007%2F978-3-540-72031-7_18">Bioinformatics Research and Applications. Lecture Notes in Computer Science, Springer-Verlag, 2007;4463:192-202.</a></td>
|
||
</tr>
|
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<tr>
|
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<th scope="row"><b>Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.</b></th>
|
||
<td scope="col">Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, et al.</td>
|
||
<td scope="col"><a href="/../pubmed/16208317">Nature. 2005 Oct 20; 437(7062): 1162-6.</a></td>
|
||
</tr>
|
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<tr>
|
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<th scope="row"><b>Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses.</b></th>
|
||
<td scope="col">Holmes EC, Ghedin E, Miller N, Taylor J, Bao Y, et al.</td>
|
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<td scope="col"><a href="/../pubmed/16026181">PLoS Biol. 2005 Sep; 3(9): e300.</a></td>
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</tr>
|
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<tr>
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<th scope="row"><b>Virus Variation Resource - recent updates and future directions.</b></th>
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<td scope="col">Brister JR, Bao Y, Zhdanov SA, Ostapchuck Y, Chetvernin V, et al.</td>
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<td scope="col"><a href="/../pubmed/24304891">Nucleic Acids Res. 2014 Jan; 42(Database issue):D660-5. doi: 10.1093/nar/gkt1268. Epub 2013 Dec 4.</a></td>
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</tr>
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<tr>
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<th scope="row"><b>The virus variation resources at the National Center for Biotechnology Information: dengue virus.</b></th>
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<td scope="col">Resch W, Zaslavsky L, Kiryutin B, Rozanov M, Bao Y, Tatusova TA.</td>
|
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<td scope="col"><a href="/../pubmed/19341451">BMC Microbiol. 2009 Apr 2;9:65.</a> </td>
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