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<div class="pre-content"><div><div class="bk_prnt"><p class="small">NCBI Bookshelf. A service of the National Library of Medicine, National Institutes of Health.</p><p>Nishihara S, Angata K, Aoki-Kinoshita KF, et al., editors. Glycoscience Protocols (GlycoPODv2) [Internet]. Saitama (JP): Japan Consortium for Glycobiology and Glycotechnology; 2021-. </p></div></div></div>
<div class="main-content lit-style" itemscope="itemscope" itemtype="http://schema.org/CreativeWork"><div class="meta-content fm-sec"><h1 id="_NBK594037_"><span class="title" itemprop="name">Enzyme assay of glycolipid glycosyltransferases: GM2/GD2 synthase (&#x003b2;1,4-GalNAc transferase, B4GALNT1)</span></h1><div class="contrib half_rhythm"><span itemprop="author">Koichi Furukawa</span>, M.D., Ph.D.<div class="affiliation small">Department of Biomedical Sciences, Chubu University College of Life and Health Sciences<div><span class="email-label">Email: </span><a href="mailto:dev@null" data-email="pj.ca.ubuhc.csi@ihciok" class="oemail">pj.ca.ubuhc.csi@ihciok</a></div></div><div class="small">Corresponding author.</div></div><div class="contrib half_rhythm"><span itemprop="author">Keiko Furukawa</span>, Ph.D.<div class="affiliation small">Department of Biomedical Sciences, Chubu University College of Life and Health Sciences<div><span class="email-label">Email: </span><a href="mailto:dev@null" data-email="pj.ca.ubuhc.csi@ufokiek" class="oemail">pj.ca.ubuhc.csi@ufokiek</a></div></div></div><div class="contrib half_rhythm"><span itemprop="author">Yuhsuke Ohmi</span>, Ph.D.<div class="affiliation small">Department of Medical Technology, Chubu University College of Life and Health Sciences<div><span class="email-label">Email: </span><a href="mailto:dev@null" data-email="pj.ca.ubuhc.csi@28imuoO" class="oemail">pj.ca.ubuhc.csi@28imuoO</a></div></div></div><div class="contrib half_rhythm"><span itemprop="author">Robiul Bhuiyan</span>, Ph.D.<div class="affiliation small">Department of Biomedical Sciences, Chubu University College of Life and Health Sciences<div><span class="email-label">Email: </span><a href="mailto:dev@null" data-email="moc.liamg@97ibortsimehcoib" class="oemail">moc.liamg@97ibortsimehcoib</a></div></div></div><p class="small">Created: <span itemprop="datePublished">January 8, 2022</span>; Last Revision: <span itemprop="dateModified">March 22, 2022</span>.</p></div><div class="body-content whole_rhythm" itemprop="text"><p>
<b>Introduction</b>
</p><p>Since molecular cloning of glycosyltransferase enzymes was successfully achieved, it has become possible to directly observe the reaction (<a class="bk_pop" href="#g67-assayb4galnt1.REF.1">1</a>), substrate specificity (<a class="bk_pop" href="#g67-assayb4galnt1.REF.2">2</a>), enzyme kinetics, and interaction with other molecules. Here, methods for measuring glycosyltransferase activity of GM2/GD2 synthase (&#x003b2;1,4-GalNAc transferase) were described using <i>in vitro</i> enzyme reaction using membrane preparation from cultured cells and tissues. This protocol applies not only to GM3 as an acceptor but also to GD3 and lactosylceramide. These methods were reported in the past articles (<a class="bk_pop" href="#g67-assayb4galnt1.REF.1">1</a>&#x02013;<a class="bk_pop" href="#g67-assayb4galnt1.REF.3">3</a>).</p><div id="g67-assayb4galnt1.Protocol"><h2 id="_g67-assayb4galnt1_Protocol_">Protocol</h2><p>In this chapter, the <i>in vitro</i> enzyme assay protocol will be described for determining the enzyme activity of GM2/GD2 synthase (&#x003b2;1,4GalNAc transferase) using membrane preparation of cultured cells or animal tissues (<a class="bk_pop" href="#g67-assayb4galnt1.REF.2">2</a>). Although this enzyme is responsible for the synthesis of GA2, GM2, GD2, and GT2 (<a class="figpopup" href="/books/NBK594037/figure/g67-assayb4galnt1.F1/?report=objectonly" target="object" rid-figpopup="figg67assayb4galnt1F1" rid-ob="figobg67assayb4galnt1F1">Figure 1</a>), this protocol will be described using GM3 as a representative acceptor (<a class="bk_pop" href="#g67-assayb4galnt1.REF.4">4</a>).</p><div id="g67-assayb4galnt1.Materials"><h3>Materials</h3><p>1. Sodium cacodylate (Wako Pure Chemical Industries Ltd., Osaka, Japan)</p><p>2. CDP-choline (Kohjin, Tokyo, Japan)</p><p>3. UDP-GalNAc (Sigma-Aldrich, St. Louis, MO)</p><p>4. GM3 (or GD3) as an acceptor (Sigma-Aldrich)</p><p>5. [<sup>14</sup>C]-UDP-GalNAc (NEN/PerkinElmer, Waltham, MA)</p><p>6. Extracts as an enzyme source</p><p>7. Triton CF54 (Sigma-Aldrich)</p></div><div id="g67-assayb4galnt1.Instruments"><h3>Instruments</h3><p>1. N2&#x000a0;cavitation apparatus</p><p>2. Water bath</p><p>3. N2&#x000a0;evaporator</p><p>4. Thin-layer chromatography (TLC) plate</p><p>5. Imaging analyzer</p><p>6. Ultracentrifuge and swing-type bucket</p><p>7. SepPak C18 cartridge (Waters Corp., Milford, MA)</p></div><div id="g67-assayb4galnt1.Methods"><h3>Methods</h3><dl class="temp-labeled-list"><dt>1.</dt><dd><p class="no_top_margin">Preparation of membrane fraction</p><dl class="temp-labeled-list"><dt>a.</dt><dd><p class="no_top_margin">N2 cavitation of cell pellets at 400 psi on ice for 30 min.</p></dd><dt>b.</dt><dd><p class="no_top_margin">Centrifuge at 1,000 rpm for 10 min at 4&#x000b0;C.</p></dd><dt>c.</dt><dd><p class="no_top_margin">Ultracentrifuge the supernatant at 34 K (Beckman, SW 55Ti) for 1 h at 4&#x000b0;C.</p></dd><dt>d.</dt><dd><p class="no_top_margin">Resuspend the pellets in 0.1 M cacodylate buffer, pH 7.2.</p></dd></dl></dd><dt>2.</dt><dd><p class="no_top_margin">Enzyme assay</p><dl class="temp-labeled-list"><dt>a.</dt><dd><p class="no_top_margin">Evaporate the following items in a glass tube.</p><p>UDP-GalNAc (400 &#x003bc;M)</p><p>GM3 (or GD3) (325 &#x003bc;M)</p><p>[<sup>14</sup>C]-UDP-GalNAc (3.5 &#x000d7; 10<sup>5</sup> dpm)</p><p>CDP-choline (10 mM)</p></dd><dt>b.</dt><dd><p class="no_top_margin">Dissolve in 0.1 M cacodylate buffer (adjust to make final volume 50 &#x003bc;L).</p></dd><dt>c.</dt><dd><p class="no_top_margin">Add 10 mM of MnCl<sub>2</sub> and 0.3% Triton CF54 in cacodylate buffer.</p></dd><dt>d.</dt><dd><p class="no_top_margin">Sonicate for 10 s.</p></dd><dt>e.</dt><dd><p class="no_top_margin">Add membrane proteins (200 &#x003bc;g).</p></dd><dt>f.</dt><dd><p class="no_top_margin">Incubate at 37&#x000b0;C for 2&#x02013;3 h with shaking.</p></dd><dt>g.</dt><dd><p class="no_top_margin">Add 1 mL of distilled water to stop the reaction.</p></dd><dt>h.</dt><dd><p class="no_top_margin">Separate the products by SepPak C18 column.</p></dd><dt>i.</dt><dd><p class="no_top_margin">Dry with N<sub>2</sub>&#x000a0;stream.</p></dd><dt>j.</dt><dd><p class="no_top_margin">Count radioactivity of one-fifth of the products using a scintillation counter (<b>Note 1</b>).</p></dd><dt>k.</dt><dd><p class="no_top_margin">Analyze four-fifths of the products in TLC and autoradiography (<b>Note 2</b>).</p></dd></dl></dd></dl></div><div id="g67-assayb4galnt1.Notes"><h3>Notes</h3><p>1. Discussion</p><p>The enzyme activity is usually expressed as unit (pmol/mg/h) and corresponds well with the glycolipid expression on the cell surface (<a class="bk_pop" href="#g67-assayb4galnt1.REF.4">4</a>).</p><p>2. Low levels of the enzyme activity should be confirmed using autofluorography (<a class="bk_pop" href="#g67-assayb4galnt1.REF.4">4</a>).</p></div></div><div id="g67-assayb4galnt1.References"><h2 id="_g67-assayb4galnt1_References_">References</h2><dl class="temp-labeled-list"><dt>1.</dt><dd><div class="bk_ref" id="g67-assayb4galnt1.REF.1">Yamashiro S, Ruan S, Furukawa K, Tai T, Lloyd KO, Shiku H, Furukawa K. Genetic and enzymatic basis for the differential expression of GM2 andGD2 gangliosides in human cancer cell lines. <span><span class="ref-journal">Cancer Res. </span>1993 Nov 15;<span class="ref-vol">53</span>(22):5395400.</span> [<a href="https://pubmed.ncbi.nlm.nih.gov/8221677" ref="pagearea=cite-ref&amp;targetsite=entrez&amp;targetcat=link&amp;targettype=pubmed">PubMed<span class="bk_prnt">: 8221677</span></a>]</div></dd><dt>2.</dt><dd><div class="bk_ref" id="g67-assayb4galnt1.REF.2">Furukawa K, Tsuchida A, Okajima T, Furukawa K. Glycoconjugate glycosyl-transferases. <span><span class="ref-journal">Glycoconj J. </span>2009 Nov;<span class="ref-vol">26</span>(8):98798.</span> [<a href="https://pubmed.ncbi.nlm.nih.gov/18683045" ref="pagearea=cite-ref&amp;targetsite=entrez&amp;targetcat=link&amp;targettype=pubmed">PubMed<span class="bk_prnt">: 18683045</span></a>] [<a href="http://dx.crossref.org/10.1007/s10719-008-9156" ref="pagearea=cite-ref&amp;targetsite=external&amp;targetcat=link&amp;targettype=uri">CrossRef</a>]</div></dd><dt>3.</dt><dd><div class="bk_ref" id="g67-assayb4galnt1.REF.3">Furukawa K, Furukawa K. Enzyme assay of glycolipid glycosyltransferases ~GM2/GD2 synthase (&#x003b2;1,4GalNAc transferase). GlycoPOD, 2013. <a href="https://jcggdb.jp/GlycoPOD/protocolShow.action?nodeId=t54" ref="pagearea=cite-ref&amp;targetsite=external&amp;targetcat=link&amp;targettype=uri">https://jcggdb<wbr style="display:inline-block"></wbr>.jp/GlycoPOD/protocolShow<wbr style="display:inline-block"></wbr>.action?nodeId=t54</a>.</div></dd><dt>4.</dt><dd><div class="bk_ref" id="g67-assayb4galnt1.REF.4">Bhuiyan RH, Ohmi Y, Ohkawa Y, Zhang P, Takano M, Hashimoto N, Okajima T, Furukawa K, Furukawa K. Loss of enzyme activity of mutated <em>B4GALNT1</em> gene products found in patients with hereditary spastic paraplegia induces relatively mild neurological disorders: Similarity with phenotypes of <em>B4galnt1</em> knockout mice. <span><span class="ref-journal">Neuroscience. </span>2019 Jan 15;<span class="ref-vol">397</span>:94106.</span> [<a href="https://pubmed.ncbi.nlm.nih.gov/30521973" ref="pagearea=cite-ref&amp;targetsite=entrez&amp;targetcat=link&amp;targettype=pubmed">PubMed<span class="bk_prnt">: 30521973</span></a>] [<a href="http://dx.crossref.org/10.1016/j.neuroscience.2018.11.034" ref="pagearea=cite-ref&amp;targetsite=external&amp;targetcat=link&amp;targettype=uri">CrossRef</a>]</div></dd></dl></div><h2 id="NBK594037_footnotes">Footnotes</h2><dl class="temp-labeled-list small"><dt></dt><dd><div id="g67-assayb4galnt1.FN1"><p class="no_top_margin">The authors declare no competing or financial interests.</p></div></dd></dl><div class="bk_prnt_sctn"><h2>Figures</h2><div class="whole_rhythm bk_prnt_obj bk_first_prnt_obj"><div id="g67-assayb4galnt1.F1" class="figure bk_fig"><div class="graphic"><img src="/books/NBK594037/bin/g67-assayb4galnt1-Image001.jpg" alt="Figure 1: . B4GALNT1 is a key enzyme for the synthesis of complex gangliosides." /></div><h3><span class="label">Figure 1: </span></h3><div class="caption"><p>B4GALNT1 is a key enzyme for the synthesis of complex gangliosides.</p><p>Loss of B4GALNT1 results in the loss of all complex gangliosides (<a class="bk_pop" href="#g67-assayb4galnt1.REF.4">4</a>).</p></div></div></div></div><div id="bk_toc_contnr"></div></div></div>
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