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id="jr-fip-matches">no matches yet</button><a id="jr-fip-next" class="wsprkl btn" title="Jump to next match">▶</a></nav></nav></div><div id="jr-epub-interstitial" class="hidden"></div><div id="jr-content"><article data-type="main"><div class="main-content lit-style" itemscope="itemscope" itemtype="http://schema.org/CreativeWork"><div class="meta-content fm-sec"><div class="fm-sec"><h1 id="_NBK570249_"><span class="title" itemprop="name">Citing dbGaP in a Publication</span></h1><p class="fm-aai"><a href="#_NBK570249_pubdet_">Publication Details</a></p><p><em>Estimated reading time: 1 minute</em></p></div></div><div class="body-content whole_rhythm" itemprop="text"><div><h4 id="Geninfo_CitingdbGaP.how_do_i_cite_dbgap">How do I cite dbGaP in the “Reference” section of a publication I am writing?</h4><blockquote><p>When you write a manuscript and report data that</p><dl class="temp-labeled-list"><dl class="bkr_refwrap"><dt>1.</dt><dd><p class="no_top_margin">are based on the use of dbGaP study data, accessed and/or downloaded from the dbGaP web site (public pages for general and summary information or Authorized Access pages for subject-level data), please cite the USE of dbGaP study data in your manuscript by referencing the study accession (phs#), and the data use, and provide a link to the appropriate study page if at all possible, using a format like this:<br /><br />The data/analyses presented in the current publication are based on the use of study data downloaded from the dbGaP web site, under phsxxxxxx.vx.px (e.g. <a href="/projects/gap/cgi-bin/study.cgi?study_id=phs000001.v1.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs000001.v1.p1</a>/https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=<a href="/projects/gap/cgi-bin/study.cgi?study_id=phs000001.v3.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs000001.v3.p1</a>);</p></dd></dl><dl class="bkr_refwrap"><dt>2.</dt><dd><p class="no_top_margin">are based on data that you uploaded to the dbGaP database, please reference the data upload using a format like this:<br /><br />The data/analyses presented in the current publication have been deposited in and are available from the dbGaP database under dbGaP accession phsxxxxxx.vx.px (e.g. <a href="/projects/gap/cgi-bin/study.cgi?study_id=phs001233.v1.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs001233.v1.p1</a>).</p></dd></dl></dl><p>When you have used or deposited data of more than one dbGaP study, please reference each dbGaP study separately, e.g.:</p><ul><li class="half_rhythm"><div>The data/analyses presented in the current publication are based on the use of study data downloaded from the dbGaP web site, under dbGaP accession e.g. <a href="/projects/gap/cgi-bin/study.cgi?study_id=phs000001.v1.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs000001.v1.p1</a>, phs000002.v1.p1, <a href="/projects/gap/cgi-bin/study.cgi?study_id=phs000003.v1.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs000003.v1.p1</a>;</div></li><li class="half_rhythm"><div>The data/analyses presented in the current publication have been deposited in and are available from the dbGaP database under dbGaP accession e.g. <a href="/projects/gap/cgi-bin/study.cgi?study_id=phs001233.v1.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs001233.v1.p1</a>, <a href="/projects/gap/cgi-bin/study.cgi?study_id=phs001234.v1.p1" class="bk_tag" ref="pagearea=body&targetsite=entrez&targetcat=link&targettype=dbgap">phs001234.v1.p1</a>.</div></li></ul><p>When you are citing the dbGaP database in general, without reference to specific studies, please use a format like this: dbGaP/database of Genotypes and Phenotypes/ National Center for Biotechnology Information, National Library of Medicine (NCBI/NLM)/https://www.ncbi.nlm.nih.gov/gap</p><p>When appropriate, please add dbGaP references, e.g.:</p><p>The NCBI dbGaP Database of Genotypes and Phenotypes. Mailman MD, Feolo M, Jin Y, Kimura M, Tryka K, Bagoutdinov R, Hao L,</p><p>Kiang A, Paschall J, Phan L, Popova N, Pretel S, Ziyabari L, Lee M, Shao Y, Wang ZY, Sirotkin K, Ward M, Kholodov M, Zbicz K, Beck J, Kimelman M, Shevelev S, Preuss D, Yaschenko E, Graeff A, Ostell J, Sherry ST.</p><p>Nat Genet. 2007 Oct; 39(10):1181-6.</p><p>NCBI's Database of Genotypes and Phenotypes: dbGaP.</p><p>Tryka KA, Hao L, Sturcke A, Jin Y, Wang ZY, Ziyabari L, Lee M, Popova N, Sharopova N, Kimura M, Feolo M.</p><p>Nucleic Acids Res. 2014 Jan; 42 (Database issue): D975-9.</p><p>(01/06/17)</p></blockquote></div><div id="bk_toc_contnr"></div></div></div><div class="fm-sec"><h2 id="_NBK570249_pubdet_">Publication Details</h2><h3>Publication History</h3><p class="small">Created: <span itemprop="datePublished">October 21, 2008</span>; Last Update: <span itemprop="dateModified">December 7, 2011</span>.</p><h3>Copyright</h3><div><div class="half_rhythm"><a href="/books/about/copyright/">Copyright Notice</a></div></div><h3>Publisher</h3><p><a href="http://www.ncbi.nlm.nih.gov/" ref="pagearea=page-banner&targetsite=external&targetcat=link&targettype=publisher">National Center for Biotechnology Information (US)</a>, Bethesda (MD)</p><h3>NLM Citation</h3><p>GaP FAQ Archive [Internet]. Bethesda (MD): National Center for Biotechnology Information (US); 2009-. Citing dbGaP in a Publication. 2008 Oct 21 [Updated 2011 Dec 7].<span class="bk_cite_avail"></span></p></div><div class="small-screen-prev"><a href="/books/n/helpdbgap/Geninfo_InformedCon/?report=reader"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 100 100" preserveAspectRatio="none"><path d="M75,30 c-80,60 -80,0 0,60 c-30,-60 -30,0 0,-60"></path><text x="20" y="28" textLength="60" style="font-size:25px">Prev</text></svg></a></div><div class="small-screen-next"><a href="/books/n/helpdbgap/Geninfo_IsDataAuth/?report=reader"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 100 100" preserveAspectRatio="none"><path d="M25,30c80,60 80,0 0,60 c30,-60 30,0 0,-60"></path><text x="20" y="28" textLength="60" style="font-size:25px">Next</text></svg></a></div></article></div><div id="jr-scripts"><script src="/corehtml/pmc/jatsreader/ptpmc_3.22/js/libs.min.js"> </script><script src="/corehtml/pmc/jatsreader/ptpmc_3.22/js/jr.min.js"> </script></div></div>
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