nih-gov/ncbiinsights.ncbi.nlm.nih.gov/2022/03/04/new-pgap/feed/index.html

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Comments on: New version of PGAP available now! </title>
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By: NCBI Staff </title>
<link>https://ncbiinsights.ncbi.nlm.nih.gov/2022/03/04/new-pgap/comment-page-1/#comment-116428</link>
<dc:creator><![CDATA[NCBI Staff]]></dc:creator>
<pubDate>Mon, 12 Jun 2023 18:34:00 +0000</pubDate>
<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=7807#comment-116428</guid>
<description><![CDATA[In reply to &lt;a href=&quot;https://ncbiinsights.ncbi.nlm.nih.gov/2022/03/04/new-pgap/comment-page-1/#comment-116415&quot;&gt;minal&lt;/a&gt;.
Thank you for letting us know. Please send detailed information to our Help Desk at info@ncbi.nlm.nih.gov. ]]></description>
<content:encoded><![CDATA[<p>In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2022/03/04/new-pgap/comment-page-1/#comment-116415">minal</a>.</p>
<p>Thank you for letting us know. Please send detailed information to our Help Desk at <a href="mailto:info@ncbi.nlm.nih.gov">info@ncbi.nlm.nih.gov</a>. </p>
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<title>
By: minal </title>
<link>https://ncbiinsights.ncbi.nlm.nih.gov/2022/03/04/new-pgap/comment-page-1/#comment-116415</link>
<dc:creator><![CDATA[minal]]></dc:creator>
<pubDate>Fri, 09 Jun 2023 14:33:07 +0000</pubDate>
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<description><![CDATA[$ ./scripts/pgap.py -r -o mg37_results.6 -g ASM2732v1.annotation.nucleotide.1.fasta -s &#039;Mycoplasmoides genitalium&#039;
PGAP version 2023-05-17.build6771 is up to date.
Output will be placed in: /tmp/tmp.4eVlLgMwWL/mg37_results.6.1
INFO: Using cached SIF image
PGAP failed, docker exited with rc = 1
Unable to find error in log file.]]></description>
<content:encoded><![CDATA[<p>$ ./scripts/pgap.py -r -o mg37_results.6 -g ASM2732v1.annotation.nucleotide.1.fasta -s &#8216;Mycoplasmoides genitalium&#8217;<br />
PGAP version 2023-05-17.build6771 is up to date.<br />
Output will be placed in: /tmp/tmp.4eVlLgMwWL/mg37_results.6.1<br />
INFO: Using cached SIF image<br />
PGAP failed, docker exited with rc = 1<br />
Unable to find error in log file.</p>
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