54 lines
3.5 KiB
Text
54 lines
3.5 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs271/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs271
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#Current Build 156
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#Released October 14, 2022
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#Organism Homo sapiens
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#Position chr8:19956191 (GRCh38.p14)
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#Alleles G>A / G>T
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 3 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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14KJPN JAPANESE Study-wide 28258 G=0.78434 A=0.21566 PRJNA678214 SAMN16789458
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Allele Frequency Aggregator Total Global 25748 G=0.91405 A=0.08595, T=0.00000 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 15464 G=0.90423 A=0.09577, T=0.00000 SAMN10492695
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Allele Frequency Aggregator African Sub 5928 G=0.9678 A=0.0322, T=0.0000 SAMN10492703
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Allele Frequency Aggregator Latin American 2 Sub 2604 G=0.8594 A=0.1406, T=0.0000 SAMN10492700
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Allele Frequency Aggregator Other Sub 1300 G=0.8831 A=0.1169, T=0.0000 SAMN11605645
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Allele Frequency Aggregator Latin American 1 Sub 266 G=0.955 A=0.045, T=0.000 SAMN10492699
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Allele Frequency Aggregator Asian Sub 98 G=0.93 A=0.07, T=0.00 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 88 G=0.95 A=0.05, T=0.00 SAMN10492702
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8.3KJPN JAPANESE Study-wide 16760 G=0.78192 A=0.21808 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 G=0.8573 A=0.1427 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 G=0.9608 A=0.0392 SAMN07486022
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1000Genomes_30x Europe Sub 1266 G=0.8318 A=0.1682 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 G=0.8428 A=0.1572 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 G=0.7521 A=0.2479 SAMN07486024
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1000Genomes_30x American Sub 980 G=0.845 A=0.155 SAMN07488242
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1000Genomes Global Study-wide 5008 G=0.8580 A=0.1420 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 G=0.9607 A=0.0393 SAMN07486022
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1000Genomes East Asian Sub 1008 G=0.7560 A=0.2440 SAMN07486024
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1000Genomes Europe Sub 1006 G=0.8469 A=0.1531 SAMN07488239
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1000Genomes South Asian Sub 978 G=0.839 A=0.161 SAMN07486027
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1000Genomes American Sub 694 G=0.853 A=0.147 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.8596 A=0.1404 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.8485 A=0.1515 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.8503 A=0.1497 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2930 G=0.7925 A=0.2075 PRJNA589833
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HapMap Global Study-wide 1892 G=0.8779 A=0.1221 PRJNA60817 SAMN10820145
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HapMap American Sub 770 G=0.842 A=0.158 SAMN10821182
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HapMap African Sub 692 G=0.965 A=0.035 SAMN10821181
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HapMap Asian Sub 254 G=0.780 A=0.220 SAMN10821184
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HapMap Europe Sub 176 G=0.835 A=0.165 SAMN10821183
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Korean Genome Project KOREAN Study-wide 1832 G=0.8051 A=0.1949 PRJNA609628
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.846 A=0.154 PRJEB5829 SAMN13000132
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Chileans Chilean Study-wide 626 G=0.835 A=0.165 PRJNA577585 SAMN13030285
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Northern Sweden ACPOP Study-wide 600 G=0.878 A=0.122 PPRJNA503394 SAMN10359154
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Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 G=0.833 A=0.167 PRJEB8705 SAMN13001620
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Qatari Global Study-wide 216 G=0.894 A=0.106 PRJNA288297 SAMN13019808
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A Vietnamese Genetic Variation Database Global Study-wide 214 G=0.785 A=0.215 PRJNA515199 SAMN10744005
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SGDP_PRJ Global Study-wide 148 G=0.412 A=0.588 PRJNA586841
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The Danish reference pan genome Danish Study-wide 40 G=0.85 A=0.15 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 16 G=0.50 A=0.50 PRJNA267856 SAMN13113809
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