55 lines
3.7 KiB
Text
55 lines
3.7 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs269/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs269
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#Current Build 156
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#Released October 14, 2022
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#Organism Homo sapiens
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#Position chr8:19956156 (GRCh38.p14)
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#Alleles T>A / T>G
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 T=0.729434 G=0.270566 PRJNA400167
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Allele Frequency Aggregator Total Global 31584 T=0.83245 A=0.00000, G=0.16755 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 26288 T=0.84898 A=0.00000, G=0.15102 SAMN10492695
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Allele Frequency Aggregator African Sub 2734 T=0.6697 A=0.0000, G=0.3303 SAMN10492703
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Allele Frequency Aggregator Other Sub 1734 T=0.7912 A=0.0000, G=0.2088 SAMN11605645
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Allele Frequency Aggregator Latin American 2 Sub 540 T=0.944 A=0.000, G=0.056 SAMN10492700
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Allele Frequency Aggregator Latin American 1 Sub 130 T=0.915 A=0.000, G=0.085 SAMN10492699
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Allele Frequency Aggregator South Asian Sub 86 T=0.91 A=0.00, G=0.09 SAMN10492702
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Allele Frequency Aggregator Asian Sub 72 T=0.89 A=0.00, G=0.11 SAMN10492704
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14KJPN JAPANESE Study-wide 28258 T=0.78406 G=0.21594 PRJNA678214 SAMN16789458
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8.3KJPN JAPANESE Study-wide 16760 T=0.78174 G=0.21826 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 T=0.7117 G=0.2883 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 T=0.5157 G=0.4843 SAMN07486022
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1000Genomes_30x Europe Sub 1266 T=0.7891 G=0.2109 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 T=0.8128 G=0.1872 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 T=0.7504 G=0.2496 SAMN07486024
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1000Genomes_30x American Sub 980 T=0.799 G=0.201 SAMN07488242
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1000Genomes Global Study-wide 5008 T=0.7220 G=0.2780 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 T=0.5295 G=0.4705 SAMN07486022
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1000Genomes East Asian Sub 1008 T=0.7540 G=0.2460 SAMN07486024
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1000Genomes Europe Sub 1006 T=0.8012 G=0.1988 SAMN07488239
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1000Genomes South Asian Sub 978 T=0.812 G=0.188 SAMN07486027
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1000Genomes American Sub 694 T=0.801 G=0.199 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.8438 G=0.1562 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.8181 G=0.1819 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.8118 G=0.1882 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.7922 G=0.2078 PRJNA589833
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HapMap Global Study-wide 1892 T=0.6845 G=0.3155 PRJNA60817 SAMN10820145
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HapMap American Sub 770 T=0.775 G=0.225 SAMN10821182
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HapMap African Sub 692 T=0.533 G=0.467 SAMN10821181
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HapMap Asian Sub 254 T=0.780 G=0.220 SAMN10821184
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HapMap Europe Sub 176 T=0.744 G=0.256 SAMN10821183
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Korean Genome Project KOREAN Study-wide 1832 T=0.8051 G=0.1949 PRJNA609628
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.818 G=0.182 PRJEB5829 SAMN13000132
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Northern Sweden ACPOP Study-wide 600 T=0.860 G=0.140 PPRJNA503394 SAMN10359154
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Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 T=0.770 G=0.230 PRJEB8705 SAMN13001620
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SGDP_PRJ Global Study-wide 224 T=0.388 G=0.612 PRJNA586841
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Qatari Global Study-wide 216 T=0.778 G=0.222 PRJNA288297 SAMN13019808
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A Vietnamese Genetic Variation Database Global Study-wide 216 T=0.787 G=0.213 PRJNA515199 SAMN10744005
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Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 84 T=0.76 G=0.24 PRJEB36033 SAMN15458807
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The Danish reference pan genome Danish Study-wide 40 T=0.85 G=0.15 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 16 T=0.50 G=0.50 PRJNA267856 SAMN13113809
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