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I - Lipid transport and metabolism</a>
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Q - Secondary metabolites biosynthesis, transport and catabolism</a>
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R - General function prediction only</a>
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<a href="/research/cog-project" title="Web Services" class="uppercase"
|
||
role="menuitem" tabindex="-1"
|
||
id="ui-ncbimenu-1_5">
|
||
COG Project
|
||
</a>
|
||
</li>
|
||
<li role="presentation" class="no-submenu">
|
||
<a href="mailto:cogs@ncbi.nlm.nih.gov" title="Web Services" class="uppercase"
|
||
role="menuitem" tabindex="-1"
|
||
id="ui-ncbimenu-1_6">
|
||
Contact
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
|
||
<main id="main_content" accesskey="3">
|
||
|
||
|
||
|
||
<section class="usa-section cog_top_section">
|
||
<div class="usa-grid">
|
||
|
||
<h1>X<span style='font-weight: 100'> - nan</span></h1>
|
||
<div style="float: right; clear: both;margin-top: -53px;">
|
||
<a class="usa-button" href="#" onclick="download_table_as_tsv('cog_result_table');">Download</a>
|
||
</div>
|
||
<h2>Stats</h2>
|
||
<div style="width: 60%">
|
||
<div class="ui-ncbigrid-outer-div organism_cog_table">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table data-jig="ncbigrid">
|
||
<thead>
|
||
<tr>
|
||
<th>COG<br>definitions</th>
|
||
<th>Organims</th>
|
||
<th>Proteins</th>
|
||
<th>Median Protein<br>Length</th>
|
||
<th>Genes</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td>134</td>
|
||
<td>2,218</td>
|
||
<td>71,141</td>
|
||
<td>318.0</td>
|
||
<td>78</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<div class="ui-ncbigrid-outer-div" style="font-size: 80%;">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table id="cog_result_table" data-jig="ncbigrid">
|
||
<thead>
|
||
<tr>
|
||
<th>Organism</th>
|
||
<th>Protein</th>
|
||
<th>COG</th>
|
||
<th>Cat</th>
|
||
<th>Annotation</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
|
||
<tr>
|
||
<td>794</td>
|
||
<td>1619</td>
|
||
<td><a href="/research/cog/cog/COG0582/">COG0582</a></td>
|
||
<td>
|
||
|
||
L
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Integrase/recombinase, includes phage integrase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>529</td>
|
||
<td>4527</td>
|
||
<td><a href="/research/cog/cog/COG0675/">COG0675</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>RNA-guided endonuclease of RuvC-like superfamily, non-autonomous transposon IS1341, or accessory protein of IS605 and IS607 transposable elements</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>305</td>
|
||
<td>536</td>
|
||
<td><a href="/research/cog/cog/COG1372/">COG1372</a></td>
|
||
<td>
|
||
|
||
L
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Intein/homing endonuclease, contains LAGLIDADG-like domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>129</td>
|
||
<td>659</td>
|
||
<td><a href="/research/cog/cog/COG1662/">COG1662</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase and inactivated derivatives, IS1 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>238</td>
|
||
<td>314</td>
|
||
<td><a href="/research/cog/cog/COG1783/">COG1783</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase large subunit</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>1023</td>
|
||
<td>3115</td>
|
||
<td><a href="/research/cog/cog/COG1943/">COG1943</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>REP element-mobilizing transposase RayT</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>275</td>
|
||
<td>361</td>
|
||
<td><a href="/research/cog/cog/COG2369/">COG2369</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>298</td>
|
||
<td>678</td>
|
||
<td><a href="/research/cog/cog/COG2452/">COG2452</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Predicted site-specific integrase-resolvase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>1274</td>
|
||
<td>5111</td>
|
||
<td><a href="/research/cog/cog/COG2801/">COG2801</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase InsO of transposable element IS3, Rve (retroviral integrase) family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>532</td>
|
||
<td>1718</td>
|
||
<td><a href="/research/cog/cog/COG2826/">COG2826</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase and inactivated derivatives, IS30 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>184</td>
|
||
<td>236</td>
|
||
<td><a href="/research/cog/cog/COG2842/">COG2842</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Bacteriophage DNA transposition protein, AAA+ family ATPase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>294</td>
|
||
<td>294</td>
|
||
<td><a href="/research/cog/cog/COG2915/">COG2915</a></td>
|
||
<td>
|
||
|
||
T
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Regulator of phage lambda lysogenization HflD, binds to CII and stimulates its degradation</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>803</td>
|
||
<td>1257</td>
|
||
<td><a href="/research/cog/cog/COG2932/">COG2932</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage repressor protein C, contains Cro/C1-type HTH and peptidase S24 domains</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>880</td>
|
||
<td>2642</td>
|
||
<td><a href="/research/cog/cog/COG2963/">COG2963</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase InsE and inactivated derivatives</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>228</td>
|
||
<td>611</td>
|
||
<td><a href="/research/cog/cog/COG3039/">COG3039</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase and inactivated derivatives, IS5 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>489</td>
|
||
<td>1737</td>
|
||
<td><a href="/research/cog/cog/COG3293/">COG3293</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>314</td>
|
||
<td>422</td>
|
||
<td><a href="/research/cog/cog/COG3299/">COG3299</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized phage protein gp47/JayE</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>903</td>
|
||
<td>1682</td>
|
||
<td><a href="/research/cog/cog/COG3311/">COG3311</a></td>
|
||
<td>
|
||
|
||
K
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>DNA-binding transcriptional regulator AlpA</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>245</td>
|
||
<td>884</td>
|
||
<td><a href="/research/cog/cog/COG3316/">COG3316</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase (or an inactivated derivative), DDE domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>557</td>
|
||
<td>1594</td>
|
||
<td><a href="/research/cog/cog/COG3328/">COG3328</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase (or an inactivated derivative)</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>354</td>
|
||
<td>1430</td>
|
||
<td><a href="/research/cog/cog/COG3335/">COG3335</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>697</td>
|
||
<td>2148</td>
|
||
<td><a href="/research/cog/cog/COG3344/">COG3344</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Retron-type reverse transcriptase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>455</td>
|
||
<td>656</td>
|
||
<td><a href="/research/cog/cog/COG3378/">COG3378</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>DNA primase, phage- or plasmid-associated</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>136</td>
|
||
<td>466</td>
|
||
<td><a href="/research/cog/cog/COG3385/">COG3385</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>IS4 transposase InsG</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>442</td>
|
||
<td>1945</td>
|
||
<td><a href="/research/cog/cog/COG3436/">COG3436</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Accessory protein of IS66 transposable element</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>525</td>
|
||
<td>1906</td>
|
||
<td><a href="/research/cog/cog/COG3464/">COG3464</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>19</td>
|
||
<td>42</td>
|
||
<td><a href="/research/cog/cog/COG3466/">COG3466</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Putative transposon-encoded protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>438</td>
|
||
<td>669</td>
|
||
<td><a href="/research/cog/cog/COG3497/">COG3497</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail sheath protein FI</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>165</td>
|
||
<td>235</td>
|
||
<td><a href="/research/cog/cog/COG3498/">COG3498</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail tube protein FII</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>153</td>
|
||
<td>218</td>
|
||
<td><a href="/research/cog/cog/COG3499/">COG3499</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage protein U</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>318</td>
|
||
<td>453</td>
|
||
<td><a href="/research/cog/cog/COG3500/">COG3500</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage protein D</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>505</td>
|
||
<td>1461</td>
|
||
<td><a href="/research/cog/cog/COG3501/">COG3501</a></td>
|
||
<td>
|
||
|
||
U
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Type VI secretion system spike component VgrG, </td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>919</td>
|
||
<td>3058</td>
|
||
<td><a href="/research/cog/cog/COG3547/">COG3547</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>106</td>
|
||
<td>151</td>
|
||
<td><a href="/research/cog/cog/COG3561/">COG3561</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage anti-repressor protein Ant</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>240</td>
|
||
<td>329</td>
|
||
<td><a href="/research/cog/cog/COG3600/">COG3600</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Antitoxin SocA of the SocAB toxin-antotoxin system, DUF4065 domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>295</td>
|
||
<td>466</td>
|
||
<td><a href="/research/cog/cog/COG3617/">COG3617</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Prophage antirepressor</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>400</td>
|
||
<td>553</td>
|
||
<td><a href="/research/cog/cog/COG3628/">COG3628</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage baseplate assembly protein W</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>316</td>
|
||
<td>501</td>
|
||
<td><a href="/research/cog/cog/COG3636/">COG3636</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized Zn-binding protein, DUF971 domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>190</td>
|
||
<td>265</td>
|
||
<td><a href="/research/cog/cog/COG3645/">COG3645</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage antirepressor protein YoqD, KilAC/ANT domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>191</td>
|
||
<td>259</td>
|
||
<td><a href="/research/cog/cog/COG3646/">COG3646</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage regulatory protein Rha</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>711</td>
|
||
<td>804</td>
|
||
<td><a href="/research/cog/cog/COG3654/">COG3654</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Prophage maintenance system killer protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>501</td>
|
||
<td>1264</td>
|
||
<td><a href="/research/cog/cog/COG3666/">COG3666</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase, IS1182 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>781</td>
|
||
<td>1874</td>
|
||
<td><a href="/research/cog/cog/COG3668/">COG3668</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Plasmid stabilization system protein ParE</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>74</td>
|
||
<td>164</td>
|
||
<td><a href="/research/cog/cog/COG3676/">COG3676</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase and inactivated derivatives</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>379</td>
|
||
<td>1166</td>
|
||
<td><a href="/research/cog/cog/COG3677/">COG3677</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase InsA</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>188</td>
|
||
<td>227</td>
|
||
<td><a href="/research/cog/cog/COG3728/">COG3728</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase, small subunit</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>395</td>
|
||
<td>507</td>
|
||
<td><a href="/research/cog/cog/COG3740/">COG3740</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage head maturation protease</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>213</td>
|
||
<td>276</td>
|
||
<td><a href="/research/cog/cog/COG3747/">COG3747</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase, small subunit</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>78</td>
|
||
<td>90</td>
|
||
<td><a href="/research/cog/cog/COG3778/">COG3778</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized conserved protein YmfQ in lambdoid prophage, DUF2313 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>124</td>
|
||
<td>142</td>
|
||
<td><a href="/research/cog/cog/COG3941/">COG3941</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail tape-measure protein, controls tail length</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>175</td>
|
||
<td>257</td>
|
||
<td><a href="/research/cog/cog/COG3948/">COG3948</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related baseplate assembly protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>76</td>
|
||
<td>110</td>
|
||
<td><a href="/research/cog/cog/COG3953/">COG3953</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>SLT domain protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>80</td>
|
||
<td>106</td>
|
||
<td><a href="/research/cog/cog/COG4195/">COG4195</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related replication protein YjqB, UPF0714/DUF867 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>66</td>
|
||
<td>79</td>
|
||
<td><a href="/research/cog/cog/COG4220/">COG4220</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage DNA packaging protein NohA, Nu1 subunit of terminase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>73</td>
|
||
<td>87</td>
|
||
<td><a href="/research/cog/cog/COG4228/">COG4228</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage DNA circularization protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>21</td>
|
||
<td>38</td>
|
||
<td><a href="/research/cog/cog/COG4342/">COG4342</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage integrase/recombinase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>131</td>
|
||
<td>167</td>
|
||
<td><a href="/research/cog/cog/COG4373/">COG4373</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage FluMu protein gp28</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>93</td>
|
||
<td>105</td>
|
||
<td><a href="/research/cog/cog/COG4379/">COG4379</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage tail protein gpP</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>78</td>
|
||
<td>87</td>
|
||
<td><a href="/research/cog/cog/COG4381/">COG4381</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gp46</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>81</td>
|
||
<td>112</td>
|
||
<td><a href="/research/cog/cog/COG4382/">COG4382</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gp16</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>194</td>
|
||
<td>260</td>
|
||
<td><a href="/research/cog/cog/COG4383/">COG4383</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gp29</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>81</td>
|
||
<td>92</td>
|
||
<td><a href="/research/cog/cog/COG4384/">COG4384</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gp45</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>209</td>
|
||
<td>295</td>
|
||
<td><a href="/research/cog/cog/COG4385/">COG4385</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Bacteriophage P2-related tail formation protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>86</td>
|
||
<td>105</td>
|
||
<td><a href="/research/cog/cog/COG4386/">COG4386</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage tail sheath protein gpL</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>138</td>
|
||
<td>167</td>
|
||
<td><a href="/research/cog/cog/COG4387/">COG4387</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gp36</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>123</td>
|
||
<td>161</td>
|
||
<td><a href="/research/cog/cog/COG4388/">COG4388</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage I protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>50</td>
|
||
<td>59</td>
|
||
<td><a href="/research/cog/cog/COG4396/">COG4396</a></td>
|
||
<td>
|
||
|
||
L
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage host-nuclease inhibitor protein Gam can participate in DNA repair</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>103</td>
|
||
<td>125</td>
|
||
<td><a href="/research/cog/cog/COG4397/">COG4397</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage major head subunit gpT</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>30</td>
|
||
<td>35</td>
|
||
<td><a href="/research/cog/cog/COG4416/">COG4416</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage FluMu protein Com</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>304</td>
|
||
<td>365</td>
|
||
<td><a href="/research/cog/cog/COG4422/">COG4422</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Bacteriophage protein gp37</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>168</td>
|
||
<td>195</td>
|
||
<td><a href="/research/cog/cog/COG4474/">COG4474</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized SPBc2 prophage-derived protein YoqJ</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>19</td>
|
||
<td>19</td>
|
||
<td><a href="/research/cog/cog/COG4518/">COG4518</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage FluMu protein gp41</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>188</td>
|
||
<td>197</td>
|
||
<td><a href="/research/cog/cog/COG4537/">COG4537</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Competence protein ComGC</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>180</td>
|
||
<td>260</td>
|
||
<td><a href="/research/cog/cog/COG4540/">COG4540</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage P2 baseplate assembly protein gpV</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>526</td>
|
||
<td>1384</td>
|
||
<td><a href="/research/cog/cog/COG4584/">COG4584</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>441</td>
|
||
<td>615</td>
|
||
<td><a href="/research/cog/cog/COG4626/">COG4626</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase-like protein, large subunit, contains N-terminal HTH domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>232</td>
|
||
<td>325</td>
|
||
<td><a href="/research/cog/cog/COG4643/">COG4643</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized domain associated with phage/plasmid primase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>186</td>
|
||
<td>348</td>
|
||
<td><a href="/research/cog/cog/COG4644/">COG4644</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase and inactivated derivatives, TnpA family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>456</td>
|
||
<td>632</td>
|
||
<td><a href="/research/cog/cog/COG4653/">COG4653</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Predicted phage phi-C31 gp36 major capsid-like protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>77</td>
|
||
<td>118</td>
|
||
<td><a href="/research/cog/cog/COG4672/">COG4672</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>314</td>
|
||
<td>690</td>
|
||
<td><a href="/research/cog/cog/COG4675/">COG4675</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail collar domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>119</td>
|
||
<td>151</td>
|
||
<td><a href="/research/cog/cog/COG4678/">COG4678</a></td>
|
||
<td>
|
||
|
||
M
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Muramidase (phage lambda lysozyme), glycosyl transferase family 104</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>373</td>
|
||
<td>530</td>
|
||
<td><a href="/research/cog/cog/COG4679/">COG4679</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>565</td>
|
||
<td>780</td>
|
||
<td><a href="/research/cog/cog/COG4695/">COG4695</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage portal protein BeeE</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>25</td>
|
||
<td>28</td>
|
||
<td><a href="/research/cog/cog/COG4707/">COG4707</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Prophage pi2 protein 07</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>72</td>
|
||
<td>110</td>
|
||
<td><a href="/research/cog/cog/COG4718/">COG4718</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>115</td>
|
||
<td>163</td>
|
||
<td><a href="/research/cog/cog/COG4722/">COG4722</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related protein YomH</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>76</td>
|
||
<td>114</td>
|
||
<td><a href="/research/cog/cog/COG4723/">COG4723</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related protein, tail assembly protein I</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>175</td>
|
||
<td>261</td>
|
||
<td><a href="/research/cog/cog/COG4733/">COG4733</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail tip protein (host specificity protein J)</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>163</td>
|
||
<td>253</td>
|
||
<td><a href="/research/cog/cog/COG4824/">COG4824</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related holin (Lysis protein)</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>86</td>
|
||
<td>122</td>
|
||
<td><a href="/research/cog/cog/COG4926/">COG4926</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail protein gp18/gp21</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>107</td>
|
||
<td>107</td>
|
||
<td><a href="/research/cog/cog/COG4940/">COG4940</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Competence protein ComGF</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>103</td>
|
||
<td>139</td>
|
||
<td><a href="/research/cog/cog/COG4983/">COG4983</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Primase-polymerase (Primpol) domain protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>27</td>
|
||
<td>33</td>
|
||
<td><a href="/research/cog/cog/COG5003/">COG5003</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gp37</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>136</td>
|
||
<td>181</td>
|
||
<td><a href="/research/cog/cog/COG5004/">COG5004</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>P2-like prophage tail protein X</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>159</td>
|
||
<td>211</td>
|
||
<td><a href="/research/cog/cog/COG5005/">COG5005</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Mu-like prophage protein gpG</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>166</td>
|
||
<td>199</td>
|
||
<td><a href="/research/cog/cog/COG5280/">COG5280</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related minor tail protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>288</td>
|
||
<td>375</td>
|
||
<td><a href="/research/cog/cog/COG5281/">COG5281</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related minor tail protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>196</td>
|
||
<td>263</td>
|
||
<td><a href="/research/cog/cog/COG5283/">COG5283</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related tail protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>104</td>
|
||
<td>178</td>
|
||
<td><a href="/research/cog/cog/COG5301/">COG5301</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related tail fiber protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>148</td>
|
||
<td>166</td>
|
||
<td><a href="/research/cog/cog/COG5302/">COG5302</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>171</td>
|
||
<td>267</td>
|
||
<td><a href="/research/cog/cog/COG5314/">COG5314</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Conjugal transfer/entry exclusion protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>207</td>
|
||
<td>219</td>
|
||
<td><a href="/research/cog/cog/COG5323/">COG5323</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage large terminase packaging protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>263</td>
|
||
<td>609</td>
|
||
<td><a href="/research/cog/cog/COG5361/">COG5361</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized conserved protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>148</td>
|
||
<td>180</td>
|
||
<td><a href="/research/cog/cog/COG5362/">COG5362</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase large subunit</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>175</td>
|
||
<td>210</td>
|
||
<td><a href="/research/cog/cog/COG5377/">COG5377</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related protein, predicted endonuclease</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>153</td>
|
||
<td>191</td>
|
||
<td><a href="/research/cog/cog/COG5410/">COG5410</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Uncharacterized domain, often fused with C-terminal phage terminase domain</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>212</td>
|
||
<td>273</td>
|
||
<td><a href="/research/cog/cog/COG5412/">COG5412</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-related protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>291</td>
|
||
<td>1338</td>
|
||
<td><a href="/research/cog/cog/COG5421/">COG5421</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>186</td>
|
||
<td>808</td>
|
||
<td><a href="/research/cog/cog/COG5433/">COG5433</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Predicted transposase YbfD/YdcC associated with H repeats</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>196</td>
|
||
<td>204</td>
|
||
<td><a href="/research/cog/cog/COG5437/">COG5437</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage tail protein, TP901-1 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>217</td>
|
||
<td>257</td>
|
||
<td><a href="/research/cog/cog/COG5449/">COG5449</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage phiJL001 protein gp84, combines DUF2163 and BR0599 domains</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>104</td>
|
||
<td>115</td>
|
||
<td><a href="/research/cog/cog/COG5471/">COG5471</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Predicted phage recombinase, RecA/RadA family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>246</td>
|
||
<td>365</td>
|
||
<td><a href="/research/cog/cog/COG5511/">COG5511</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage capsid protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>102</td>
|
||
<td>141</td>
|
||
<td><a href="/research/cog/cog/COG5518/">COG5518</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage capsid portal protein XkdE</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>240</td>
|
||
<td>358</td>
|
||
<td><a href="/research/cog/cog/COG5525/">COG5525</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase, large subunit GpA</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>156</td>
|
||
<td>276</td>
|
||
<td><a href="/research/cog/cog/COG5527/">COG5527</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Protein involved in initiation of plasmid replication</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>85</td>
|
||
<td>117</td>
|
||
<td><a href="/research/cog/cog/COG5529/">COG5529</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>166</td>
|
||
<td>273</td>
|
||
<td><a href="/research/cog/cog/COG5534/">COG5534</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Plasmid replication initiator protein</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>202</td>
|
||
<td>283</td>
|
||
<td><a href="/research/cog/cog/COG5545/">COG5545</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Self-loading helicase or an inactivated derivative</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>16</td>
|
||
<td>49</td>
|
||
<td><a href="/research/cog/cog/COG5558/">COG5558</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>80</td>
|
||
<td>85</td>
|
||
<td><a href="/research/cog/cog/COG5562/">COG5562</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Prophage-encoded protein YbcV, DUF1398 family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>20</td>
|
||
<td>21</td>
|
||
<td><a href="/research/cog/cog/COG5565/">COG5565</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage terminase large (ATPase) subunit and inactivated derivatives</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>100</td>
|
||
<td>136</td>
|
||
<td><a href="/research/cog/cog/COG5566/">COG5566</a></td>
|
||
<td>
|
||
|
||
K
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Transcriptional regulator, middle operon regulator (Mor) family</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>32</td>
|
||
<td>48</td>
|
||
<td><a href="/research/cog/cog/COG5585/">COG5585</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>319</td>
|
||
<td>411</td>
|
||
<td><a href="/research/cog/cog/COG5614/">COG5614</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Phage head-tail adaptor</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>29</td>
|
||
<td>40</td>
|
||
<td><a href="/research/cog/cog/COG5655/">COG5655</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Replication initiaton protein REP (rolling circle plasmid replication)</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>185</td>
|
||
<td>476</td>
|
||
<td><a href="/research/cog/cog/COG5659/">COG5659</a></td>
|
||
<td>
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>SRSO17 transposase</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>9</td>
|
||
<td>13</td>
|
||
<td><a href="/research/cog/cog/COG5951/">COG5951</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Anti-CRISPR type II-A1 protein, inhibits CRISPR-Cas type II-A system</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>2</td>
|
||
<td>2</td>
|
||
<td><a href="/research/cog/cog/COG5952/">COG5952</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Anti-CRISPR type II-A2 protein, inhibits CRISPR-Cas type II-A system</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>14</td>
|
||
<td>14</td>
|
||
<td><a href="/research/cog/cog/COG5953/">COG5953</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Anti-CRISPR type II-A6 protein, inhibits CRISPR-Cas type II-A system</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>4</td>
|
||
<td>4</td>
|
||
<td><a href="/research/cog/cog/COG5954/">COG5954</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Anti-CRISPR type II-C2 protein, inhibits CRISPR-Cas type II-A system</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>13</td>
|
||
<td>13</td>
|
||
<td><a href="/research/cog/cog/COG5955/">COG5955</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Anti-CRISPR type II-C1 protein, inhibits CRISPR-Cas type II-A system</td>
|
||
</tr>
|
||
|
||
<tr>
|
||
<td>1</td>
|
||
<td>1</td>
|
||
<td><a href="/research/cog/cog/COG5956/">COG5956</a></td>
|
||
<td>
|
||
|
||
V
|
||
|
||
X
|
||
|
||
</td>
|
||
<td>Anti-CRISPR type V-A1 protein, inhibits CRISPR-Cas12a nuclease</td>
|
||
</tr>
|
||
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
</section>
|
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