1163 lines
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1163 lines
60 KiB
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<tbody>
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<tr>
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<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE280482">GSE280482</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops (SDS test)</div>
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</td>
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<a href="?view=series&type=23&sort=suppl&display=20">Other</a>
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</a>
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<a class="sp" href="?view=series&tax=9606&sort=suppl&display=20">Homo sapiens</a>
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</ul>
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</td>
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<td class="right">
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<a class="commas" href="/geo/browse/?view=samples&series=280482">71</a>
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</td>
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<td class="center"></td>
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<td class="suppl">
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<ul>
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<li>
|
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<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280482/suppl">
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<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
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</a>
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<span><a href="?view=series&suppl=3DG&sort=suppl&display=20">3DG</a> <a href="?view=series&suppl=BW&sort=suppl&display=20">BW</a> <a href="?view=series&suppl=HIC&sort=suppl&display=20">HIC</a> <a href="?view=series&suppl=MCOOL&sort=suppl&display=20">MCOOL</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
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</li>
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</ul>
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</td>
|
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<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=90963&sort=suppl&display=20">Xiaoliang Sunney Xie</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=28Feb2025&sort=suppl&display=20">Feb 28, 2025</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE281150">GSE281150</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops</div>
|
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</td>
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||
<td>
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<ul class="bullet setype">
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<a href="?view=series&type=23&sort=suppl&display=20">Other</a>
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<td class="species">
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<ul>
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<li>
|
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<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606">
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<img src="/geo/img/link.png" alt="Link icon" />
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</a>
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<a class="sp" href="?view=series&tax=9606&sort=suppl&display=20">Homo sapiens</a>
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|
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<a class="commas" href="/geo/browse/?view=samples&series=281150">829</a>
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<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE281nnn/GSE281150/suppl">
|
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<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
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</a>
|
||
<span><a href="?view=series&suppl=3DG&sort=suppl&display=20">3DG</a> <a href="?view=series&suppl=BW&sort=suppl&display=20">BW</a> <a href="?view=series&suppl=HIC&sort=suppl&display=20">HIC</a> <a href="?view=series&suppl=MCOOL&sort=suppl&display=20">MCOOL</a> <a href="?view=series&suppl=PAIRS&sort=suppl&display=20">PAIRS</a> <a href="?view=series&suppl=TAR&sort=suppl&display=20">TAR</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
|
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</li>
|
||
</ul>
|
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</td>
|
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<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=90963&sort=suppl&display=20">Xiaoliang Sunney Xie</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=28Feb2025&sort=suppl&display=20">Feb 28, 2025</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE199499">GSE199499</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Single-cell chromatin accessibility profiling reveals a self-renewing muscle satellite cell state</div>
|
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</td>
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<td>
|
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<ul class="bullet setype">
|
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|
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<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
<li>
|
||
<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
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<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
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<img src="/geo/img/link.png" alt="Link icon" />
|
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</a>
|
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<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
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<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=199499">28</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE199nnn/GSE199499/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ARROW&sort=suppl&display=20">ARROW</a> <a href="?view=series&suppl=FPKM_TRACKING&sort=suppl&display=20">FPKM_TRACKING</a> <a href="?view=series&suppl=RDS&sort=suppl&display=20">RDS</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=94132&sort=suppl&display=20">Yarui Diao</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=18Jun2023&sort=suppl&display=20">Jun 18, 2023</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE215824">GSE215824</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Alveolar epithelial progenitor cells drive lung regeneration via dynamic changes in chromatin topology modulated by lineage-specific Nkx2-1 activity</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
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<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
<li>
|
||
<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
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<td class="species">
|
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<ul>
|
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<li>
|
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<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
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<img src="/geo/img/link.png" alt="Link icon" />
|
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</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
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<td class="right">
|
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<a class="commas" href="/geo/browse/?view=samples&series=215824">8</a>
|
||
</td>
|
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<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE215nnn/GSE215824/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
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</a>
|
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<span><a href="?view=series&suppl=ARROW&sort=suppl&display=20">ARROW</a> <a href="?view=series&suppl=LOOM&sort=suppl&display=20">LOOM</a> <a href="?view=series&suppl=RDS&sort=suppl&display=20">RDS</a> </span>
|
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</li>
|
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</ul>
|
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</td>
|
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<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=99635&sort=suppl&display=20">William Zacharias</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=19Oct2022&sort=suppl&display=20">Oct 19, 2022</a>
|
||
</td>
|
||
</tr>
|
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<tr>
|
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<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE218881">GSE218881</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Nanowell-based single-cell combinatorial indexed ATAC-seq</div>
|
||
</td>
|
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<td>
|
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<ul class="bullet setype">
|
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<li>
|
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<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
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</li>
|
||
</ul>
|
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</td>
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<td class="species">
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<ul>
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<li>
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<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
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<img src="/geo/img/link.png" alt="Link icon" />
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</a>
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<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
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</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=218881">3</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE218nnn/GSE218881/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ARROW&sort=suppl&display=20">ARROW</a> <a href="?view=series&suppl=BED&sort=suppl&display=20">BED</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA906077">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=59879&sort=suppl&display=20">Andrew Adey</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=08Feb2023&sort=suppl&display=20">Feb 08, 2023</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE240583">GSE240583</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Baf155 establishes chromatin priming to promote hematopoietic regeneration and function [single cell multiome - ATAC + GEX]</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
<li>
|
||
<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=240583">12</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE240nnn/GSE240583/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ARROW&sort=suppl&display=20">ARROW</a> <a href="?view=series&suppl=MTX&sort=suppl&display=20">MTX</a> <a href="?view=series&suppl=RDS&sort=suppl&display=20">RDS</a> <a href="?view=series&suppl=TSV&sort=suppl&display=20">TSV</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=106314&sort=suppl&display=20">Changxu Fan</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=09Jul2024&sort=suppl&display=20">Jul 09, 2024</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE240585">GSE240585</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Baf155 controls hematopoietic differentiation and regeneration through chromatin priming </div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
<li>
|
||
<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=240585">24</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE240nnn/GSE240585/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ARROW&sort=suppl&display=20">ARROW</a> <a href="?view=series&suppl=BW&sort=suppl&display=20">BW</a> <a href="?view=series&suppl=MTX&sort=suppl&display=20">MTX</a> <a href="?view=series&suppl=TSV&sort=suppl&display=20">TSV</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=106314&sort=suppl&display=20">Changxu Fan</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=08Jul2024&sort=suppl&display=20">Jul 08, 2024</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE274040">GSE274040</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Transcriptional and chromatin accessibility landscapes of hematopoiesis in a mouse model of breast cancer</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=23&sort=suppl&display=20">Other</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=274040">16</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE274nnn/GSE274040/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ARROW&sort=suppl&display=20">ARROW</a> <a href="?view=series&suppl=MTX&sort=suppl&display=20">MTX</a> <a href="?view=series&suppl=RDS&sort=suppl&display=20">RDS</a> <a href="?view=series&suppl=TSV&sort=suppl&display=20">TSV</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=106314&sort=suppl&display=20">Changxu Fan</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=05Feb2025&sort=suppl&display=20">Feb 05, 2025</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE119440">GSE119440</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Indole signaling at the host-microbiota-pathogen interface</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=83334">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=83334&sort=suppl&display=20">Escherichia coli O157:H7</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=119440">4</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE119nnn/GSE119440/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ASTAR&sort=suppl&display=20">ASTAR</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA489260">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=60818&sort=suppl&display=20">Aman Kumar</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=05Jan2019&sort=suppl&display=20">Jan 05, 2019</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE124940">GSE124940</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>The Impact of Wheat Rht-B1b Semi-Dwarfing Allele on Photosynthesis and Seed Development under Field Conditions</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=4565">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=4565&sort=suppl&display=20">Triticum aestivum</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=124940">24</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE124nnn/GSE124940/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ASTAR&sort=suppl&display=20">ASTAR</a> <a href="?view=series&suppl=XLSX&sort=suppl&display=20">XLSX</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA514367">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=63233&sort=suppl&display=20">Michael Giroux</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=11Jan2019&sort=suppl&display=20">Jan 11, 2019</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE144795">GSE144795</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>The serotonin neurotransmitter modulates virulence of enteric pathogens</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=562">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=562&sort=suppl&display=20">Escherichia coli</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=144795">2</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE144nnn/GSE144795/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=ASTAR&sort=suppl&display=20">ASTAR</a> <a href="?view=series&suppl=XLSX&sort=suppl&display=20">XLSX</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA604962">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=60818&sort=suppl&display=20">Aman Kumar</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=08May2020&sort=suppl&display=20">May 08, 2020</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE21720">GSE21720</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>A metabolomics analysis of Salmonella infection</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=23&sort=suppl&display=20">Other</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=21720">14</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE21nnn/GSE21720/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAF&sort=suppl&display=20">BAF</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=6290&sort=suppl&display=20">L. Caetano M. Antunes</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=08Feb2011&sort=suppl&display=20">Feb 08, 2011</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE25687">GSE25687</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>The effect of antibiotic treatment on the intestinal metabolome</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=23&sort=suppl&display=20">Other</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=25687">8</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE25nnn/GSE25687/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAF&sort=suppl&display=20">BAF</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=6290&sort=suppl&display=20">L. Caetano M. Antunes</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=08Feb2011&sort=suppl&display=20">Feb 08, 2011</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE25840">GSE25840</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Widespread RNA and DNA Sequence Differences in the Human Genome</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=27&sort=suppl&display=20">Third-party reanalysis</a>
|
||
</li>
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=9606&sort=suppl&display=20">Homo sapiens</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right"></td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE25nnn/GSE25840/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=BAM&sort=suppl&display=20">BAM</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=7386&sort=suppl&display=20">Mingyao Li</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=19May2011&sort=suppl&display=20">May 19, 2011</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE29423">GSE29423</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Transcriptome analysis of light-utilizing Strain IMCC1322, a member of SAR116 group bacteria</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488538">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=488538&sort=suppl&display=20">Candidatus Puniceispirillum marinum IMCC1322</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=29423">6</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE29nnn/GSE29423/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=BAM&sort=suppl&display=20">BAM</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA141609">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=21445&sort=suppl&display=20">Hyun-Myung Oh</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=01May2020&sort=suppl&display=20">May 01, 2020</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE31206">GSE31206</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Colistin-resistant, lipopolysaccharide-deficient Acinetobacter baumannii responds to lipopolysaccharide loss through increased expression of genes involved in the synthesis and transport of lipoproteins, phospholipids and poly-beta-1,6-N-acetylglucosamine</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=470">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=470&sort=suppl&display=20">Acinetobacter baumannii</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=31206">4</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE31nnn/GSE31206/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=BAM&sort=suppl&display=20">BAM</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA145979">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=15248&sort=suppl&display=20">Paul Francis Harrison</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=11Aug2011&sort=suppl&display=20">Aug 11, 2011</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE33480">GSE33480</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>RNA-seq from ENCODE/Caltech</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=9606&sort=suppl&display=20">Homo sapiens</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=33480">24</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE33nnn/GSE33480/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=BAM&sort=suppl&display=20">BAM</a> <a href="?view=series&suppl=BIGBED&sort=suppl&display=20">BIGBED</a> <a href="?view=series&suppl=BIGWIG&sort=suppl&display=20">BIGWIG</a> <a href="?view=series&suppl=GTF&sort=suppl&display=20">GTF</a> <a href="?view=series&suppl=TXT&sort=suppl&display=20">TXT</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA30709">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=31080&sort=suppl&display=20">ENCODE DCC</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=12Jul2012&sort=suppl&display=20">Jul 12, 2012</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE33838">GSE33838</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=9606&sort=suppl&display=20">Homo sapiens</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=33838">2</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE33nnn/GSE33838/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=BAM&sort=suppl&display=20">BAM</a> <a href="?view=series&suppl=BEDGRAPH&sort=suppl&display=20">BEDGRAPH</a> <a href="?view=series&suppl=CSV&sort=suppl&display=20">CSV</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA148093">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=44106&sort=suppl&display=20">Stephen Tapscott</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=03Jan2012&sort=suppl&display=20">Jan 03, 2012</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE65191">GSE65191</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Nucleosome locations in human oral keratinocytes</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=14&sort=suppl&display=20">Genome binding/occupancy profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=9606&sort=suppl&display=20">Homo sapiens</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=65191">4</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE65nnn/GSE65191/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=BAM&sort=suppl&display=20">BAM</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA273377">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=39939&sort=suppl&display=20">Guy Lyons</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=31Dec2017&sort=suppl&display=20">Dec 31, 2017</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="/geo/query/acc.cgi?acc=GSE95430">GSE95430</a>
|
||
</td>
|
||
<td class="title">
|
||
<div>Single cell RNA-seq of eight thousand epithelium cells from the mammary glands of adult mice</div>
|
||
</td>
|
||
<td>
|
||
<ul class="bullet setype">
|
||
<li>
|
||
<a href="?view=series&type=3&sort=suppl&display=20">Expression profiling by high throughput sequencing</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="species">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
||
<img src="/geo/img/link.png" alt="Link icon" />
|
||
</a>
|
||
<a class="sp" href="?view=series&tax=10090&sort=suppl&display=20">Mus musculus</a>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="right">
|
||
<a class="commas" href="/geo/browse/?view=samples&series=95430">2</a>
|
||
</td>
|
||
<td class="center"></td>
|
||
<td class="suppl">
|
||
<ul>
|
||
<li>
|
||
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE95nnn/GSE95430/suppl">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=BAI&sort=suppl&display=20">BAI</a> <a href="?view=series&suppl=MTX&sort=suppl&display=20">MTX</a> <a href="?view=series&suppl=TSV&sort=suppl&display=20">TSV</a> </span>
|
||
</li>
|
||
<li>
|
||
<a class="link_icon" href="https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA377105">
|
||
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
||
</a>
|
||
<span><a href="?view=series&suppl=SRA Run Selector&sort=suppl&display=20">SRA Run Selector</a> </span>
|
||
</li>
|
||
</ul>
|
||
</td>
|
||
<td class="contact">
|
||
<a class="cont" href="?view=series&submitter=13718&sort=suppl&display=20">Gordon K Smyth</a>
|
||
</td>
|
||
<td class="date">
|
||
<a href="?view=series&date=20Nov2017&sort=suppl&display=20">Nov 20, 2017</a>
|
||
</td>
|
||
</tr>
|
||
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|
||
</table>
|
||
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|
||
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