nih-gov/ncbiinsights.ncbi.nlm.nih.gov/wp-json/wp/v2/posts/3440

{"id":3440,"date":"2020-01-13T16:51:26","date_gmt":"2020-01-13T21:51:26","guid":{"rendered":"http:\/\/ncbiinsights.ncbi.nlm.nih.gov\/?p=3440"},"modified":"2020-04-06T10:51:57","modified_gmt":"2020-04-06T14:51:57","slug":"novel-coronavirus","status":"publish","type":"post","link":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/","title":{"rendered":"Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank"},"content":{"rendered":"<p><strong><em>Updated!<\/em><\/strong><\/p>\n<p style=\"padding-left: 40px;\"><strong><em>Get rapid access to Wuhan coronavirus (2019-nCoV) <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/genbank\/2019-ncov-seqs\/?utm_campaign=wuhan_nCoV&amp;utm_source=insights&amp;utm_medium=referral\">sequence data<\/a> from the current outbreak as it becomes available.\u00a0We will continue to update the page with newly released data.<\/em><\/strong><\/p>\n<p>The complete annotated genome sequence of the novel coronavirus associated with the <a href=\"https:\/\/www.who.int\/westernpacific\/emergencies\/pneumonia-in-wuhan-china\">outbreak of pneumonia<\/a> in Wuhan, China is now <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/nuccore\/MN908947\">available<\/a> from GenBank for free and easy access by the global biomedical community. Figure 1 shows the relationship of the Wuhan virus to selected coronaviruses.<\/p>\n<p><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" data-attachment-id=\"3444\" data-permalink=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/wuhan-human-1_posterior-output2\/\" data-orig-file=\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2020\/01\/wuhan-human-1_posterior-output2.png?fit=1000%2C600&amp;ssl=1\" data-orig-size=\"1000,600\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;,&quot;orientation&quot;:&quot;0&quot;}\" data-image-title=\"Wuhan-human-1_posterior-output2\" data-image-description=\"\" data-image-caption=\"\" data-medium-file=\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2020\/01\/wuhan-human-1_posterior-output2.png?fit=300%2C180&amp;ssl=1\" data-large-file=\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2020\/01\/wuhan-human-1_posterior-output2.png?fit=1000%2C600&amp;ssl=1\" class=\"alignnone size-full wp-image-3444\" src=\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2020\/01\/wuhan-human-1_posterior-output2.png?resize=1000%2C600&#038;ssl=1\" alt=\"Wuhan-human-1_posterior-output2\" width=\"1000\" height=\"600\" \/><\/p>\n<p><em>Figure 1.\u00a0 Phylogenetic tree showing the relationship of Wuhan-Hu-1 (circled in red) to selected coronaviruses. Nucleotide alignment was done with <a href=\"https:\/\/www.drive5.com\/muscle\/\">MUSCLE<\/a> 3.8. The phylogenetic tree was estimated with <a href=\"https:\/\/nbisweden.github.io\/MrBayes\/download.html\">MrBayes<\/a> 3.2.6 with parameters for GTR+g+i.\u00a0 The scale bar indicates estimated substitutions per site, and all branch support values are 99.3% or higher.<\/em><\/p>\n<p><!--more-->According to the <a href=\"https:\/\/www.cdc.gov\/coronavirus\/novel-coronavirus-2019.html\">CDC<\/a>, as of January 11, Chinese health authorities say they\u2019ve identified more than 40 human infections as part of this outbreak that was first reported on December 31. The World Health Organization <a href=\"https:\/\/www.who.int\/china\/news\/detail\/09-01-2020-who-statement-regarding-cluster-of-pneumonia-cases-in-wuhan-china\">announced<\/a> the preliminary identification of the novel coronavirus on January 9. The GenBank <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/nuccore\/MN908947\">record<\/a> of Wuhan-Hu-1 includes sequence data, annotation and metadata from this virus isolated approximately two weeks ago from a patient believed to have contracted the disease in a Hubei province seafood market.<\/p>\n<p>Rapid access to sequence data from public databases such as GenBank plays a vital role in helping countries develop specific diagnostic kits for disease outbreaks like this one.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Updated! Get rapid access to Wuhan coronavirus (2019-nCoV) sequence data from the current outbreak as it becomes available.\u00a0We will continue to update the page with newly released data. The complete annotated genome sequence of the novel coronavirus associated with the outbreak of pneumonia in Wuhan, China is now available from GenBank for free and easy &hellip; <a href=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":42204617,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_coblocks_attr":"","_coblocks_dimensions":"","_coblocks_responsive_height":"","_coblocks_accordion_ie_support":"","jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank!","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","enabled":false},"version":2}},"categories":[2248],"tags":[1899315,693060687,1201719,26986,3064946,693060688,929142,2439],"table_tags":[],"class_list":["post-3440","post","type-post","status-publish","format-standard","hentry","category-whats-new","tag-coronavirus","tag-covid-19","tag-genbank","tag-genome","tag-nucleotide","tag-sars-cov-2","tag-sequences","tag-viruses"],"jetpack_publicize_connections":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.6 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank - NCBI Insights<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank - NCBI Insights\" \/>\n<meta property=\"og:description\" content=\"Updated! Get rapid access to Wuhan coronavirus (2019-nCoV) sequence data from the current outbreak as it becomes available.\u00a0We will continue to update the page with newly released data. The complete annotated genome sequence of the novel coronavirus associated with the outbreak of pneumonia in Wuhan, China is now available from GenBank for free and easy &hellip; Continue reading Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank &rarr;\" \/>\n<meta property=\"og:url\" content=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\" \/>\n<meta property=\"og:site_name\" content=\"NCBI Insights\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/ncbi.nlm\" \/>\n<meta property=\"article:published_time\" content=\"2020-01-13T21:51:26+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2020-04-06T14:51:57+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2020\/01\/wuhan-human-1_posterior-output2.png\" \/>\n<meta name=\"author\" content=\"NCBI Staff\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:creator\" content=\"@NCBI\" \/>\n<meta name=\"twitter:site\" content=\"@NCBI\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"NCBI Staff\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\"},\"author\":{\"name\":\"NCBI Staff\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/4f41ea6a31cea38a9a1b1419c048e50b\"},\"headline\":\"Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank\",\"datePublished\":\"2020-01-13T21:51:26+00:00\",\"dateModified\":\"2020-04-06T14:51:57+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\"},\"wordCount\":239,\"commentCount\":51,\"publisher\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization\"},\"image\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2020\/01\/wuhan-human-1_posterior-output2.png\",\"keywords\":[\"Coronavirus\",\"COVID-19\",\"GenBank\",\"Genome\",\"NCBI Nucleotide\",\"SARS-CoV-2\",\"Sequences\",\"Viruses\"],\"articleSection\":[\"What's New\"],\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"CommentAction\",\"name\":\"Comment\",\"target\":[\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/#respond\"]}]},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\",\"url\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2020\/01\/13\/novel-coronavirus\/\",\"name\":\"Novel coronavirus complete genome from the Wuhan outbreak now available in GenBank - 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