96 lines
53 KiB
HTML
96 lines
53 KiB
HTML
<!DOCTYPE html>
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<html amp lang="en-US" data-amp-auto-lightbox-disable transformed="self;v=1" i-amphtml-layout="" i-amphtml-no-boilerplate="">
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/*# sourceURL=/css/ampshared.css*/</style><meta property="og:locale" content="en_US"><meta property="og:type" content="article"><meta property="og:title" content="Upcoming Changes to NCBI’s BioSample Database - NCBI Insights"><meta property="og:description" content="Improving Metadata Quality Do you rely on high-quality metadata from NCBI’s BioSample database? BioSample is home to metadata associated with the biological source materials used to generate raw reads, sequences, and other data submitted to NCBI. We are improving our submission process to ensure we provide you with more complete and robust information. Attention submitters! … Continue reading Upcoming Changes to NCBI’s BioSample Database →"><meta property="og:url" content="https://ncbiinsights.ncbi.nlm.nih.gov/2024/10/23/changes-ncbis-biosample-database/"><meta property="og:site_name" content="NCBI Insights"><meta property="article:publisher" content="https://www.facebook.com/ncbi.nlm"><meta property="article:published_time" content="2024-10-23T13:41:25+00:00"><meta property="og:image" content="https://ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/10/BioSample_Blog-e1729621385257.png"><meta property="og:image:width" content="1100"><meta property="og:image:height" content="550"><meta property="og:image:type" content="image/png"><meta name="author" content="NCBI Staff"><meta name="twitter:card" content="summary_large_image"><meta name="twitter:creator" content="@NCBI"><meta name="twitter:site" content="@NCBI"><meta name="twitter:label1" content="Written by"><meta name="twitter:data1" content="NCBI Staff"><meta 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<h1 class="amp-wp-title">Upcoming Changes to NCBI’s BioSample Database</h1>
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<time datetime="2024-10-23T13:41:25+00:00">
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4 months ago </time>
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<amp-img width="1024" height="512" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/10/BioSample_Blog-e1729621385257.png?fit=1024%2C512&ssl=1" class="attachment-large size-large wp-post-image amp-wp-enforced-sizes i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" alt="Test tubes in the background with a gloved hand holding a dropper. Text says: BioSample Improving metadata quality" data-hero-candidate="" layout="intrinsic" data-hero i-amphtml-ssr i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjUxMiIgd2lkdGg9IjEwMjQiIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyIgdmVyc2lvbj0iMS4xIi8+"></i-amphtml-sizer><img class="i-amphtml-fill-content i-amphtml-replaced-content" decoding="async" loading="lazy" alt="Test tubes in the background with a gloved hand holding a dropper. Text says: BioSample Improving metadata quality" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/10/BioSample_Blog-e1729621385257.png?fit=1024%2C512&ssl=1"></amp-img> </figure>
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<div class="amp-wp-article-content">
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<h3><i><span data-contrast="auto">Improving Metadata Quality</span></i><span data-ccp-props="{}"> </span></h3>
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<p><span data-contrast="auto">Do you rely on high-quality metadata from NCBI’s <a href="https://www.ncbi.nlm.nih.gov/biosample/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=biosample-metadata-20241023">BioSample</a> database? BioSample is home to metadata associated with the biological source materials used to generate raw reads, sequences, and other data submitted to NCBI. We are improving our submission process to ensure we provide you with more complete and robust information.</span><span data-ccp-props="{}"> </span></p>
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<h5><b><span data-contrast="auto">Attention submitters!</span></b><span data-ccp-props="{}"> </span></h5>
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<p><span data-contrast="auto">To improve metadata quality, we are introducing new submission validation steps and providing improved help documentation.</span><span data-ccp-props="{}"> </span></p>
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<ul>
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||
<li data-leveltext="" data-font="Symbol" data-listid="3" data-list-defn-props='{"335552541":1,"335559685":720,"335559991":360,"469769226":"Symbol","469769242":[8226],"469777803":"left","469777804":"","469777815":"hybridMultilevel"}' aria-setsize="-1" data-aria-posinset="1" data-aria-level="1"><span data-amp-original-style="font-size: 17px;" class="amp-wp-8bdd01f">A valid organism name will now be required in the organism field. </span></li>
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||
<li data-leveltext="" data-font="Symbol" data-listid="3" data-list-defn-props='{"335552541":1,"335559685":720,"335559991":360,"469769226":"Symbol","469769242":[8226],"469777803":"left","469777804":"","469777815":"hybridMultilevel"}' aria-setsize="-1" data-aria-posinset="1" data-aria-level="1"><span data-amp-original-style="font-size: 17px;" class="amp-wp-8bdd01f">An organism’s strain-level name will undergo validation checking. </span></li>
|
||
<li data-leveltext="" data-font="Symbol" data-listid="3" data-list-defn-props='{"335552541":1,"335559685":720,"335559991":360,"469769226":"Symbol","469769242":[8226],"469777803":"left","469777804":"","469777815":"hybridMultilevel"}' aria-setsize="-1" data-aria-posinset="1" data-aria-level="1"><span data-amp-original-style="font-size: 17px;" class="amp-wp-8bdd01f">Improved support for submitters with new help documentation: </span>
|
||
<ul>
|
||
<li data-leveltext="" data-font="Symbol" data-listid="3" data-list-defn-props='{"335552541":1,"335559685":720,"335559991":360,"469769226":"Symbol","469769242":[8226],"469777803":"left","469777804":"","469777815":"hybridMultilevel"}' aria-setsize="-1" data-aria-posinset="1" data-aria-level="1"><span data-amp-original-style="font-size: 16px;" class="amp-wp-beab583"><a href="https://www.ncbi.nlm.nih.gov/biosample/docs/submission/missing-value-reporting/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=biosample-metadata-20241023">How to Report Missing Values when Submitting a BioSample</a> </span></li>
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||
<li data-leveltext="" data-font="Symbol" data-listid="3" data-list-defn-props='{"335552541":1,"335559685":720,"335559991":360,"469769226":"Symbol","469769242":[8226],"469777803":"left","469777804":"","469777815":"hybridMultilevel"}' aria-setsize="-1" data-aria-posinset="1" data-aria-level="1"><span data-amp-original-style="font-size: 16px;" class="amp-wp-beab583"><a href="https://www.ncbi.nlm.nih.gov/biosample/docs/submission/validation-errors/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=biosample-metadata-20241023">BioSample Validation Errors</a> </span></li>
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||
</ul>
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</li>
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</ul>
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<p><span data-contrast="none">These efforts will improve metadata quality by encouraging you to include additional information and fix errors during the submission process.</span><span data-ccp-props="{}"> </span></p>
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<h5 aria-level="5"><b><span data-contrast="none">Stay up to date </span></b><span data-ccp-props='{"134233117":true,"134233118":true,"335557856":16777215}'> </span></h5>
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<p><span data-contrast="none">Follow us on social </span><a href="https://twitter.com/ncbi"><span data-contrast="none">@NCBI</span></a><span data-contrast="none"> and </span><a href="https://public.govdelivery.com/accounts/USNLMOCPL/subscriber/new?topic_id=USNLMOCPL_52"><span data-contrast="none">join our mailing list</span></a><span data-contrast="none"> to keep up to date with BioSample and other NCBI news. </span><span data-ccp-props='{"134233117":true,"134233118":true,"335557856":16777215}'> </span></p>
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<h5 aria-level="5"><b><span data-contrast="none">Questions? </span></b><span data-ccp-props='{"134233117":true,"134233118":true,"335557856":16777215}'> </span></h5>
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