87 lines
71 KiB
HTML
87 lines
71 KiB
HTML
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/*# sourceURL=/css/ampshared.css*/</style><meta property="og:locale" content="en_US"><meta property="og:type" content="article"><meta property="og:title" content="Upcoming Changes to NCBI Taxonomy Classifications - NCBI Insights"><meta property="og:description" content="NCBI is continually making improvements to our Taxonomy resource in response to new data and changes in biological nomenclature and classification. In the coming months, we will update the higher-level classification of birds (Aves), budding yeasts (Saccharomycotina), prokaryotes (Bacteria and Archaea) and Viruses. This update will also change the formal ranks of several high-level taxonomic … Continue reading Upcoming Changes to NCBI Taxonomy Classifications →"><meta property="og:url" content="https://ncbiinsights.ncbi.nlm.nih.gov/2024/06/04/changes-ncbi-taxonomy-classifications/"><meta property="og:site_name" content="NCBI Insights"><meta property="article:publisher" content="https://www.facebook.com/ncbi.nlm"><meta property="article:published_time" content="2024-06-04T14:32:40+00:00"><meta property="article:modified_time" content="2024-06-07T19:41:19+00:00"><meta property="og:image" content="https://ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/NCBI-Taxonomy-4-e1717449746542.png"><meta property="og:image:width" content="1100"><meta property="og:image:height" content="575"><meta property="og:image:type" content="image/png"><meta name="author" content="NCBI Staff"><meta name="twitter:card" content="summary_large_image"><meta name="twitter:creator" content="@NCBI"><meta name="twitter:site" content="@NCBI"><meta name="twitter:label1" content="Written by"><meta name="twitter:data1" content="NCBI Staff"><meta name="twitter:label2" content="Est. reading time"><meta name="twitter:data2" content="1 minute"><meta name="robots" content="index, follow, max-image-preview:large, max-snippet:-1, max-video-preview:-1"><meta name="generator" content="AMP Plugin v2.5.5; mode=reader; theme=legacy"><link rel="preload" href="https://ncbiinsights.ncbi.nlm.nih.gov/wp-includes/fonts/dashicons.eot?99ac726223c749443b642ce33df8b800#iefix" as="font" crossorigin=""><script async="" src="https://cdn.ampproject.org/v0.mjs" type="module" crossorigin="anonymous"></script><script async nomodule src="https://cdn.ampproject.org/v0.js" crossorigin="anonymous"></script><script src="https://cdn.ampproject.org/v0/amp-social-share-0.1.mjs" async="" custom-element="amp-social-share" type="module" crossorigin="anonymous"></script><script async nomodule 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<h1 class="amp-wp-title">Upcoming Changes to NCBI Taxonomy Classifications</h1>
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9 months ago </time>
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<amp-img width="1024" height="535" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/NCBI-Taxonomy-4-e1717449746542.png?fit=1024%2C535&ssl=1" class="attachment-large size-large wp-post-image amp-wp-enforced-sizes i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" alt="Eight images in squares, including bird, bread, prokaryotic organisms, and viruses. Text says: Updates coming soon! NCBI Taxonomy." data-hero-candidate="" layout="intrinsic" data-hero i-amphtml-ssr i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjUzNSIgd2lkdGg9IjEwMjQiIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyIgdmVyc2lvbj0iMS4xIi8+"></i-amphtml-sizer><img class="i-amphtml-fill-content i-amphtml-replaced-content" decoding="async" loading="lazy" alt="Eight images in squares, including bird, bread, prokaryotic organisms, and viruses. Text says: Updates coming soon! NCBI Taxonomy." src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/NCBI-Taxonomy-4-e1717449746542.png?fit=1024%2C535&ssl=1"></amp-img> </figure>
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<p><span data-contrast="auto">NCBI is continually making improvements to our <a href="https://www.ncbi.nlm.nih.gov/taxonomy?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=taxonomy-classification-changes-20240604">Taxonomy</a> resource in response to new data and changes in biological nomenclature and classification. In the coming months, we will update the higher-level classification of birds (<a href="https://www.ncbi.nlm.nih.gov/datasets/taxonomy/8782/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=taxonomy-classification-changes-20240604">Aves</a>), budding yeasts (<a href="https://www.ncbi.nlm.nih.gov/datasets/taxonomy/147537/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=taxonomy-classification-changes-20240604">Saccharomycotina</a>), prokaryotes (<a href="https://www.ncbi.nlm.nih.gov/datasets/taxonomy/2/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=taxonomy-classification-changes-20240604">Bacteria</a> and <a href="https://www.ncbi.nlm.nih.gov/datasets/taxonomy/2157/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=taxonomy-classification-changes-20240604">Archaea</a>) and <a href="https://www.ncbi.nlm.nih.gov/datasets/taxonomy/10239/?utm_source=ncbi_insights&utm_medium=referral&utm_campaign=taxonomy-classification-changes-20240604">Viruses</a>. This update will also change the formal ranks of several high-level taxonomic names including Eukaryota. Except for the new species names for Viruses, none of these changes will affect organism names at the species level or below. </span><span data-ccp-props='{"201341983":0,"335559739":160,"335559740":259}'> </span></p>
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<p><span data-contrast="auto">Here is a brief overview of changes to each group in the order we plan to make them. Stay tuned for upcoming posts, which will describe the changes for each category in more detail.</span><span data-ccp-props='{"201341983":0,"335559739":160,"335559740":259}'> </span></p>
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<div class="wptb-table-container wptb-table-13385"><div class="wptb-table-container-matrix" id="wptb-table-id-13385" data-wptb-version="2.0.2" data-wptb-pro-status="false"><table class="wptb-preview-table wptb-element-main-table_setting-12022 amp-wp-2829297" data-reconstraction="1" data-wptb-table-tds-sum-max-width="343.40000000000003" data-wptb-cells-width-auto-count="1" data-wptb-horizontal-scroll-status="false" data-wptb-extra-styles="LyogRW50ZXIgeW91ciBjdXN0b20gQ1NTIHJ1bGVzIGhlcmUgKi8=" role="table" data-table-columns="2" data-wptb-table-alignment="center" data-amp-original-style="border: 1px solid rgb(209, 209, 209);"><tbody><tr class="wptb-row"><td class="wptb-cell amp-wp-831e70c" data-y-index="0" data-x-index="0" data-amp-original-style="border: 1px solid rgb(209, 209, 209); width: 181px;"><div class="wptb-image-container wptb-ph-element wptb-element-image-13" data-wptb-image-alignment="center"><div class="wptb-image-wrapper"> <span class="wptb-link-target amp-wp-bda2351" data-amp-original-style="float: none; width: 50%;"> <amp-img class="wptb-image-element-target amp-wp-enforced-sizes amp-wp-199b6f0 i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Viruses-1.png?resize=1108%2C1108" layout="intrinsic" data-amp-original-style="width: 100%;" i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjExMDgiIHdpZHRoPSIxMTA4IiB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciIHZlcnNpb249IjEuMSIvPg=="></i-amphtml-sizer><noscript><img loading="lazy" decoding="async" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Viruses-1.png?resize=1108%2C1108"></noscript></amp-img> </span> </div></div></td><td class="wptb-cell amp-wp-2829297" data-y-index="0" data-x-index="1" data-wptb-css-td-auto-width="true" data-amp-original-style="border: 1px solid rgb(209, 209, 209);"><div class="wptb-text-container wptb-ph-element wptb-element-text-1 amp-wp-0fa61c8" data-amp-original-style="color: rgb(0, 0, 0); font-size: 17px;"><div class=" amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p><strong>Viruses</strong></p></div></div><div class="wptb-list-container wptb-ph-element wptb-element-list-1"><ul> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="1." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">New binomial species names for viruses including the Human immunodeficiency virus (HIV) and Severe acute respiratory syndrome-related coronavirus (SARS) </p></div> </li> </ul></div></td></tr><tr class="wptb-row amp-wp-23109d7" data-amp-original-style="--hover-bg-color: undefined;"><td class="wptb-cell amp-wp-831e70c" data-y-index="1" data-x-index="0" data-amp-original-style="border: 1px solid rgb(209, 209, 209); width: 181px;"><div class="wptb-image-container wptb-ph-element wptb-element-image-12" data-wptb-image-alignment="center"><div class="wptb-image-wrapper"> <span class="wptb-link-target amp-wp-bda2351" data-amp-original-style="float: none; width: 50%;"> <amp-img class="wptb-image-element-target amp-wp-enforced-sizes amp-wp-199b6f0 i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Birds.png?resize=1108%2C1108" layout="intrinsic" data-amp-original-style="width: 100%;" i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjExMDgiIHdpZHRoPSIxMTA4IiB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciIHZlcnNpb249IjEuMSIvPg=="></i-amphtml-sizer><noscript><img loading="lazy" decoding="async" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Birds.png?resize=1108%2C1108"></noscript></amp-img> </span> </div></div></td><td class="wptb-cell amp-wp-2829297" data-y-index="1" data-x-index="1" data-wptb-css-td-auto-width="true" data-amp-original-style="border: 1px solid rgb(209, 209, 209);"><div class="wptb-text-container wptb-ph-element wptb-element-text-2 amp-wp-0fa61c8" data-amp-original-style="color: rgb(0, 0, 0); font-size: 17px;"><div class=" amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p><strong>Birds (Aves)</strong></p></div></div><div class="wptb-list-container wptb-ph-element wptb-element-list-2"><ul> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="1." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">New major taxonomic group (clade) within birds, Neoaves, comprising 95% of all bird species </p></div> </li> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="2." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">5 new clades under Neoaves </p></div> </li> </ul></div></td></tr><tr class="wptb-row amp-wp-23109d7" data-amp-original-style="--hover-bg-color: undefined;"><td class="wptb-cell amp-wp-831e70c" data-y-index="2" data-x-index="0" data-wptb-cell-vertical-alignment="center" data-amp-original-style="border: 1px solid rgb(209, 209, 209); width: 181px;"><div class="wptb-image-container wptb-ph-element wptb-element-image-4" data-wptb-image-alignment="center"><div class="wptb-image-wrapper"> <span class="wptb-link-target amp-wp-bda2351" data-amp-original-style="float: none; width: 50%;"> <amp-img class="wptb-image-element-target amp-wp-enforced-sizes amp-wp-199b6f0 i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Yeast.png?resize=1108%2C1108" layout="intrinsic" data-amp-original-style="width: 100%;" i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjExMDgiIHdpZHRoPSIxMTA4IiB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciIHZlcnNpb249IjEuMSIvPg=="></i-amphtml-sizer><noscript><img loading="lazy" decoding="async" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Yeast.png?resize=1108%2C1108"></noscript></amp-img> </span> </div></div></td><td class="wptb-cell amp-wp-2829297" data-y-index="2" data-x-index="1" data-wptb-css-td-auto-width="true" data-amp-original-style="border: 1px solid rgb(209, 209, 209);"><div class="wptb-text-container wptb-ph-element wptb-element-text-3 amp-wp-0fa61c8" data-amp-original-style="color: rgb(0, 0, 0); font-size: 17px;"><div class=" amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p><strong>Yeasts</strong></p></div></div><div class="wptb-list-container wptb-ph-element wptb-element-list-3"><ul> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="1." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">The subphylum Saccharomycotina will be divided into 6 new classes and 11 new orders </p></div> </li> </ul></div></td></tr><tr class="wptb-row amp-wp-23109d7" data-amp-original-style="--hover-bg-color: undefined;"><td class="wptb-cell amp-wp-831e70c" data-y-index="3" data-x-index="0" data-amp-original-style="border: 1px solid rgb(209, 209, 209); width: 181px;"><div class="wptb-image-container wptb-ph-element wptb-element-image-5" data-wptb-image-alignment="center"><div class="wptb-image-wrapper"> <span class="wptb-link-target amp-wp-bda2351" data-amp-original-style="float: none; width: 50%;"> <amp-img class="wptb-image-element-target amp-wp-enforced-sizes amp-wp-199b6f0 i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Prok-3.png?resize=1108%2C1108" layout="intrinsic" data-amp-original-style="width: 100%;" i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjExMDgiIHdpZHRoPSIxMTA4IiB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciIHZlcnNpb249IjEuMSIvPg=="></i-amphtml-sizer><noscript><img loading="lazy" decoding="async" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/Prok-3.png?resize=1108%2C1108"></noscript></amp-img> </span> </div></div></td><td class="wptb-cell amp-wp-2829297" data-y-index="3" data-x-index="1" data-wptb-css-td-auto-width="true" data-amp-original-style="border: 1px solid rgb(209, 209, 209);"><div class="wptb-text-container wptb-ph-element wptb-element-text-4 amp-wp-0fa61c8" data-amp-original-style="color: rgb(0, 0, 0); font-size: 17px;"><div class=" amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p><strong>Prokaryotes</strong></p></div></div><div class="wptb-list-container wptb-ph-element wptb-element-list-4"><ul> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="1." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">Bacteria and Archaea will each be assigned the rank domain </p></div> </li> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="2." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">Bacteria will be divided into 4 new kingdoms</p></div> </li> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="3." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">Archaea will be divided into 3 new kingdoms with 4 new phylum names</p></div> </li> </ul></div></td></tr><tr class="wptb-row amp-wp-23109d7" data-amp-original-style="--hover-bg-color: undefined;"><td class="wptb-cell wptb-ondragenter amp-wp-831e70c" data-x-index="0" data-y-index="4" data-amp-original-style="border: 1px solid rgb(209, 209, 209); width: 181px;"><div class="wptb-image-container wptb-ph-element wptb-element-image-14" data-wptb-image-alignment="center"><div class="wptb-image-wrapper"> <span class="wptb-link-target amp-wp-bda2351" data-amp-original-style="float: none; width: 50%;"> <amp-img class="wptb-image-element-target amp-wp-enforced-sizes amp-wp-199b6f0 i-amphtml-layout-intrinsic i-amphtml-layout-size-defined" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/New-Ranks-3.png?resize=1108%2C1108" layout="intrinsic" data-amp-original-style="width: 100%;" i-amphtml-layout="intrinsic"><i-amphtml-sizer slot="i-amphtml-svc" class="i-amphtml-sizer"><img alt="" aria-hidden="true" class="i-amphtml-intrinsic-sizer" role="presentation" src="data:image/svg+xml;base64,PHN2ZyBoZWlnaHQ9IjExMDgiIHdpZHRoPSIxMTA4IiB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciIHZlcnNpb249IjEuMSIvPg=="></i-amphtml-sizer><noscript><img loading="lazy" decoding="async" height="1108" width="1108" src="https://i0.wp.com/ncbiinsights.ncbi.nlm.nih.gov/wp-content/uploads/2024/06/New-Ranks-3.png?resize=1108%2C1108"></noscript></amp-img> </span> </div></div></td><td class="wptb-cell amp-wp-2829297" data-x-index="1" data-y-index="4" data-wptb-css-td-auto-width="true" data-amp-original-style="border: 1px solid rgb(209, 209, 209);"><div class="wptb-text-container wptb-ph-element wptb-element-text-5 amp-wp-0fa61c8" data-amp-original-style="color: rgb(0, 0, 0); font-size: 17px;"><div class=""><p><strong>New ranks: Domain and Realm </strong></p></div></div><div class="wptb-list-container wptb-ph-element wptb-element-list-5"><ul> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="1." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">The rank superkingdom will no longer be used in NCBI Taxonomy </p></div> </li> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="2." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">The current Archaea, Bacteria, and Eukaryota superkingdoms will be given the rank domain</p></div> </li> <li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="3." class="wptb-list-style-type-disc amp-wp-6ba96ea" data-amp-original-style="color: #000000; font-size: 17px; text-align: left;">The name Viruses will be assigned “no rank” instead of "superkingdom"</p></div> </li><li class="wptb-in-element amp-wp-7d2d11b" data-amp-original-style="margin-bottom: 5px;"> <div class="wptb-list-item-content amp-wp-d85c4e6" data-amp-original-style="position: relative;"><p data-list-style-type-index="4." class="wptb-list-style-type-disc amp-wp-fc84ba6" data-amp-original-style="color: rgb(0, 0, 0); font-size: 17px; text-align: left;">6 clades within Viruses will be relabelled with the new rank realm as the highest formal taxonomic rank in Viruses</p></div> </li> </ul></div></td></tr></tbody></table></div></div>
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