53 lines
3.2 KiB
Text
53 lines
3.2 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs6025/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs6025
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#Current Build 156
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#Released October 12, 2022
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#Organism Homo sapiens
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#Position chr1:169549811 (GRCh38.p14)
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#Alleles C>A / C>T
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 184 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 C=0.983256 T=0.016744 PRJNA400167
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Allele Frequency Aggregator Total Global 169494 C=0.977415 T=0.022585 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 135734 C=0.974642 T=0.025358 SAMN10492695
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Allele Frequency Aggregator Other Sub 12252 C=0.97984 T=0.02016 SAMN11605645
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Allele Frequency Aggregator African Sub 10800 C=0.99491 T=0.00509 SAMN10492703
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Allele Frequency Aggregator Latin American 2 Sub 5380 C=0.9879 T=0.0121 SAMN10492700
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Allele Frequency Aggregator Asian Sub 3714 C=1.0000 T=0.0000 SAMN10492704
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Allele Frequency Aggregator Latin American 1 Sub 1254 C=0.9872 T=0.0128 SAMN10492699
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Allele Frequency Aggregator South Asian Sub 360 C=0.992 T=0.008 SAMN10492702
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gnomAD - Genomes Global Study-wide 140250 C=0.982381 T=0.017619 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75950 C=0.97300 T=0.02700 SAMN10181265
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gnomAD - Genomes African Sub 42032 C=0.99534 T=0.00466 SAMN07488254
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gnomAD - Genomes American Sub 13662 C=0.99041 T=0.00959 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3324 C=0.9789 T=0.0211 SAMN07488252
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gnomAD - Genomes East Asian Sub 3130 C=1.0000 T=0.0000 SAMN07488251
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gnomAD - Genomes Other Sub 2152 C=0.9893 T=0.0107 SAMN07488248
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The PAGE Study Global Study-wide 78700 C=0.99382 T=0.00618 PRJNA168052 SAMN10868975
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The PAGE Study AfricanAmerican Sub 32516 C=0.99459 T=0.00541 SAMN10868721
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The PAGE Study Mexican Sub 10810 C=0.99084 T=0.00916 SAMN10868735
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The PAGE Study Asian Sub 8318 C=0.9995 T=0.0005 SAMN10868722
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The PAGE Study PuertoRican Sub 7916 C=0.9972 T=0.0028 SAMN10868968
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The PAGE Study NativeHawaiian Sub 4534 C=0.9932 T=0.0068 SAMN10868777
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The PAGE Study Cuban Sub 4230 C=0.9868 T=0.0132 SAMN10868733
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The PAGE Study Dominican Sub 3828 C=0.9948 T=0.0052 SAMN10868734
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The PAGE Study CentralAmerican Sub 2450 C=0.9906 T=0.0094 SAMN10868729
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The PAGE Study SouthAmerican Sub 1982 C=0.9884 T=0.0116 SAMN10868969
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The PAGE Study NativeAmerican Sub 1260 C=0.9825 T=0.0175 SAMN10868739
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The PAGE Study SouthAsian Sub 856 C=0.988 T=0.012 SAMN10868970
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1000Genomes_30x Global Study-wide 6404 C=0.9941 T=0.0059 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 C=1.0000 T=0.0000 SAMN07486022
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1000Genomes_30x Europe Sub 1266 C=0.9889 T=0.0111 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 C=0.9884 T=0.0116 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 C=1.0000 T=0.0000 SAMN07486024
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1000Genomes_30x American Sub 980 C=0.990 T=0.010 SAMN07488242
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KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.0000 A=0.0000 PRJNA589833
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HapMap Global Study-wide 1134 C=0.9912 T=0.0088 PRJNA60817 SAMN10820145
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HapMap American Sub 670 C=0.987 T=0.013 SAMN10821182
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HapMap Europe Sub 176 C=0.994 T=0.006 SAMN10821183
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HapMap Asian Sub 168 C=1.000 T=0.000 SAMN10821184
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HapMap African Sub 120 C=1.000 T=0.000 SAMN10821181
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