54 lines
3.6 KiB
Text
54 lines
3.6 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs385955/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs385955
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#Current Build 156
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#Released October 13, 2022
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#Organism Homo sapiens
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#Position chr6:2836032 (GRCh38.p14)
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#Alleles T>A / T>C / T>G
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 T=0.443749 A=0.556251 PRJNA400167
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Allele Frequency Aggregator Total Global 39856 T=0.46257 A=0.53743, G=0.00000 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 31106 T=0.45445 A=0.54555, G=0.00000 SAMN10492695
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Allele Frequency Aggregator Other Sub 6692 T=0.4357 A=0.5643, G=0.0000 SAMN11605645
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Allele Frequency Aggregator African Sub 1508 T=0.7188 A=0.2812, G=0.0000 SAMN10492703
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Allele Frequency Aggregator Latin American 1 Sub 372 T=0.462 A=0.538, G=0.000 SAMN10492699
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Allele Frequency Aggregator Latin American 2 Sub 90 T=0.86 A=0.14, G=0.00 SAMN10492700
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Allele Frequency Aggregator Asian Sub 74 T=0.53 A=0.47, G=0.00 SAMN10492704
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Allele Frequency Aggregator South Asian Sub 14 T=0.86 A=0.14, G=0.00 SAMN10492702
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GO Exome Sequencing Project Global Study-wide 13006 T=0.47401 A=0.52599 PRJNA192955
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GO Exome Sequencing Project European American Sub 8600 T=0.4248 A=0.5752
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GO Exome Sequencing Project African American Sub 4406 T=0.5701 A=0.4299
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1000Genomes_30x Global Study-wide 6404 T=0.4502 A=0.5498 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 T=0.5487 A=0.4513 SAMN07486022
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1000Genomes_30x Europe Sub 1266 T=0.4107 A=0.5893 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 T=0.4526 A=0.5474 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 T=0.4291 A=0.5709 SAMN07486024
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1000Genomes_30x American Sub 980 T=0.344 A=0.656 SAMN07488242
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1000Genomes Global Study-wide 5008 T=0.4501 A=0.5499 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 T=0.5499 A=0.4501 SAMN07486022
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1000Genomes East Asian Sub 1008 T=0.4315 A=0.5685 SAMN07486024
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1000Genomes Europe Sub 1006 T=0.4175 A=0.5825 SAMN07488239
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1000Genomes South Asian Sub 978 T=0.447 A=0.553 SAMN07486027
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1000Genomes American Sub 694 T=0.339 A=0.661 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.4636 A=0.5364 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.4351 A=0.5649 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.4086 A=0.5914 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.4034 A=0.5966, C=0.0000, G=0.0000 PRJNA589833
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.415 A=0.585 PRJEB5829 SAMN13000132
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A Vietnamese Genetic Variation Database Global Study-wide 613 T=0.493 A=0.507 PRJNA515199 SAMN10744005
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Northern Sweden ACPOP Study-wide 600 T=0.495 A=0.505 PPRJNA503394 SAMN10359154
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Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 T=0.421 A=0.579 PRJEB8705 SAMN13001620
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SGDP_PRJ Global Study-wide 496 T=0.276 A=0.724 PRJNA586841
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HapMap Global Study-wide 308 T=0.458 A=0.542 PRJNA60817 SAMN10820145
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HapMap American Sub 116 T=0.362 A=0.638 SAMN10821182
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HapMap African Sub 106 T=0.651 A=0.349 SAMN10821181
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HapMap Asian Sub 86 T=0.35 A=0.65 SAMN10821184
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FINRISK Finnish from FINRISK project Study-wide 304 T=0.556 A=0.444 PRJEB7895 SAMN13002954
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Qatari Global Study-wide 216 T=0.407 A=0.593 PRJNA288297 SAMN13019808
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The Danish reference pan genome Danish Study-wide 40 T=0.50 A=0.50 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 40 T=0.30 A=0.70 PRJNA267856 SAMN13113809
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