71 lines
4.8 KiB
Text
71 lines
4.8 KiB
Text
#URL https://www.ncbi.nlm.nih.gov/snp/rs2295767/download/frequency
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#NCBI Reference SNP (rs) Report ALPHA rs2295767
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#Current Build 156
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#Released October 13, 2022
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#Organism Homo sapiens
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#Position chr6:2954323 (GRCh38.p14)
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#Alleles C>A / C>T
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#Variation Type SNV (Single Nucleotide Variation)
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#Publications 0 citations
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#
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#Frequency Data Table
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#################
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#Study Population Group Samplesize Ref Allele Alt Allele BioProject ID BioSample ID
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TopMed Global Study-wide 264690 C=0.794601 T=0.205399 PRJNA400167
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Genographic Project Global Study-wide 205076 C=0.838606 T=0.161394 Unknown
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gnomAD - Genomes Global Study-wide 139890 C=0.782872 T=0.217128 PRJNA398795 SAMN07488253
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gnomAD - Genomes European Sub 75808 C=0.82863 T=0.17137 SAMN10181265
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gnomAD - Genomes African Sub 41880 C=0.65857 T=0.34143 SAMN07488254
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gnomAD - Genomes American Sub 13612 C=0.87753 T=0.12247 SAMN07488255
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gnomAD - Genomes Ashkenazi Jewish Sub 3318 C=0.8421 T=0.1579 SAMN07488252
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gnomAD - Genomes East Asian Sub 3130 C=0.8390 T=0.1610 SAMN07488251
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gnomAD - Genomes Other Sub 2142 C=0.8184 T=0.1816 SAMN07488248
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Allele Frequency Aggregator Total Global 74076 C=0.85095 A=0.00000, T=0.14905 PRJNA507278 SAMN10492705
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Allele Frequency Aggregator European Sub 59770 C=0.85596 A=0.00000, T=0.14404 SAMN10492695
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Allele Frequency Aggregator South Asian Sub 4934 C=0.7967 A=0.0000, T=0.2033 SAMN10492702
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Allele Frequency Aggregator African Sub 3592 C=0.7700 A=0.0000, T=0.2300 SAMN10492703
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Allele Frequency Aggregator Latin American 2 Sub 3262 C=0.9169 A=0.0000, T=0.0831 SAMN10492700
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Allele Frequency Aggregator Other Sub 1972 C=0.8717 A=0.0000, T=0.1283 SAMN11605645
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Allele Frequency Aggregator Latin American 1 Sub 344 C=0.855 A=0.000, T=0.145 SAMN10492699
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Allele Frequency Aggregator Asian Sub 202 C=0.856 A=0.000, T=0.144 SAMN10492704
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14KJPN JAPANESE Study-wide 28258 C=0.83707 T=0.16293 PRJNA678214 SAMN16789458
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8.3KJPN JAPANESE Study-wide 16760 C=0.83610 T=0.16390 PRJNA678214 SAMN16789458
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1000Genomes_30x Global Study-wide 6404 C=0.7851 T=0.2149 PRJEB31736 SAMN07490465
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1000Genomes_30x African Sub 1786 C=0.6338 T=0.3662 SAMN07486022
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1000Genomes_30x Europe Sub 1266 C=0.8349 T=0.1651 SAMN07488239
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1000Genomes_30x South Asian Sub 1202 C=0.8195 T=0.1805 SAMN07486027
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1000Genomes_30x East Asian Sub 1170 C=0.8299 T=0.1701 SAMN07486024
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1000Genomes_30x American Sub 980 C=0.901 T=0.099 SAMN07488242
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1000Genomes Global Study-wide 5008 C=0.7839 T=0.2161 PRJEB6930 SAMN07490465
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1000Genomes African Sub 1322 C=0.6286 T=0.3714 SAMN07486022
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1000Genomes East Asian Sub 1008 C=0.8264 T=0.1736 SAMN07486024
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1000Genomes Europe Sub 1006 C=0.8310 T=0.1690 SAMN07488239
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1000Genomes South Asian Sub 978 C=0.817 T=0.183 SAMN07486027
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1000Genomes American Sub 694 C=0.903 T=0.097 SAMN07488242
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Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8317 T=0.1683 PRJNA489787
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The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8433 T=0.1567 PRJEB7217
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UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8447 T=0.1553 PRJEB7218
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KOREAN population from KRGDB KOREAN Study-wide 2922 C=0.8604 T=0.1396 PRJNA589833
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HGDP-CEPH-db Supplement 1 Global Study-wide 2082 C=0.8218 T=0.1782 PRJEB6463
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HGDP-CEPH-db Supplement 1 Est_Asia Sub 468 C=0.833 T=0.167 SAMN13169023
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HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 C=0.742 T=0.258 SAMN13169022
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HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 C=0.789 T=0.211 SAMN13169025
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HGDP-CEPH-db Supplement 1 Europe Sub 320 C=0.875 T=0.125 SAMN13169024
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HGDP-CEPH-db Supplement 1 Africa Sub 242 C=0.707 T=0.293 SAMN13169020
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HGDP-CEPH-db Supplement 1 America Sub 216 C=1.000 T=0.000 SAMN13169021
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HGDP-CEPH-db Supplement 1 Oceania Sub 72 C=0.99 T=0.01 SAMN13169026
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HapMap Global Study-wide 1890 C=0.7471 T=0.2529 PRJNA60817 SAMN10820145
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HapMap American Sub 768 C=0.801 T=0.199 SAMN10821182
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HapMap African Sub 692 C=0.621 T=0.379 SAMN10821181
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HapMap Asian Sub 254 C=0.858 T=0.142 SAMN10821184
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HapMap Europe Sub 176 C=0.847 T=0.153 SAMN10821183
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Korean Genome Project KOREAN Study-wide 1832 C=0.8597 T=0.1403 PRJNA609628
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Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.861 T=0.139 PRJEB5829 SAMN13000132
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Chileans Chilean Study-wide 626 C=0.915 T=0.085 PRJNA577585 SAMN13030285
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Northern Sweden ACPOP Study-wide 600 C=0.843 T=0.157 PPRJNA503394 SAMN10359154
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Qatari Global Study-wide 216 C=0.759 T=0.241 PRJNA288297 SAMN13019808
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A Vietnamese Genetic Variation Database Global Study-wide 210 C=0.767 T=0.233 PRJNA515199 SAMN10744005
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SGDP_PRJ Global Study-wide 172 C=0.465 T=0.535 PRJNA586841
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Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 74 C=0.78 T=0.22 PRJEB36033 SAMN15458807
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The Danish reference pan genome Danish Study-wide 40 C=0.82 T=0.17 PRJEB7725 SAMN13003120
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Siberian Global Study-wide 20 C=0.45 T=0.55 PRJNA267856 SAMN13113809
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