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<title>aroH chorismate mutase [Bacillus subtilis subsp. subtilis str. 168] - Gene - NCBI</title>
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<div class="search"><div class="search_form"><label for="database" class="offscreen_noflow">Search database</label><select id="database"><optgroup label="Recent"><option value="books">Books</option><option value="pmc">PMC</option><option value="nuccore" data-ac_dict="nuccore">Nucleotide</option><option value="refseq" class="last">RefSeq</option></optgroup><optgroup label="All"><option value="gquery">All Databases</option><option value="assembly" data-ac_dict="assembly">Assembly</option><option value="biocollections">Biocollections</option><option value="bioproject">BioProject</option><option value="biosample">BioSample</option><option value="books">Books</option><option value="clinvar">ClinVar</option><option value="cdd">Conserved Domains</option><option value="gap">dbGaP</option><option value="dbvar">dbVar</option><option value="gene" selected="selected" data-ac_dict="gene">Gene</option><option value="genome" data-ac_dict="genome">Genome</option><option value="gds">GEO DataSets</option><option value="geoprofiles">GEO Profiles</option><option value="gtr">GTR</option><option value="ipg">Identical Protein Groups</option><option value="medgen">MedGen</option><option value="mesh">MeSH</option><option value="nlmcatalog">NLM Catalog</option><option value="nuccore" data-ac_dict="nuccore">Nucleotide</option><option value="omim">OMIM</option><option value="pmc">PMC</option><option value="protein" data-ac_dict="protein">Protein</option><option value="proteinclusters">Protein Clusters</option><option value="protfam">Protein Family Models</option><option value="pcassay">PubChem BioAssay</option><option value="pccompound">PubChem Compound</option><option value="pcsubstance">PubChem Substance</option><option value="pubmed">PubMed</option><option value="snp">SNP</option><option value="sra">SRA</option><option value="structure">Structure</option><option value="taxonomy">Taxonomy</option><option value="toolkit">ToolKit</option><option value="toolkitall">ToolKitAll</option><option value="toolkitbookgh">ToolKitBookgh</option></optgroup></select><div class="nowrap"><label for="term" class="offscreen_noflow" accesskey="/">Search term</label><div class="nowrap"><input type="text" name="term" id="term" title="Search Gene. Use up and down arrows to choose an item from the autocomplete." value="" class="jig-ncbiclearbutton jig-ncbiautocomplete" data-jigconfig="dictionary:'gene',disableUrl:'NcbiSearchBarAutoComplCtrl'" autocomplete="off" data-sbconfig="ds:'no',pjs:'yes',afs:'yes'" /></div><button id="search" type="submit" class="button_search nowrap" cmd="go">Search</button></div></div><ul class="searchlinks inline_list"><set></set><li><a href="/gene/advanced">Advanced</a></li><li class="help"><a id="help" class="jig-ncbihelpwindow" target="ncbihelp" name="help" href="/books/NBK3841/">Help</a></li></ul></div>
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<div class="facet_cont" data-db="gene" data-default_grps="fg_gene-sources,fg_categories,fg_sequence-content,fg_status" data-sd="db:'gene',op:'select',term:'',qk:'2618',linkname:'',idsfromresult:'939005',extra:''"><ul class="facet" data-filter_id="gene-sources" id="_gene-sources"><li class="filter_grp "><div class="clearfix"><h3>Gene sources</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="genomic">Genomic</a></li></ul></li></ul><ul class="facet" data-filter_id="categories" id="_categories"><li class="filter_grp "><div class="clearfix"><h3>Categories</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="annotated-genes">Annotated genes</a></li><li class="fil_val"><a href="#" data-value_id="gene-type-protein-coding">Protein-coding</a></li></ul></li></ul><ul class="facet" data-filter_id="sequence-content" id="_sequence-content"><li class="filter_grp "><div class="clearfix"><h3>Sequence content</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="refseq">RefSeq</a></li></ul></li></ul><ul class="facet" data-filter_id="status" id="_status"><li class="filter_grp "><div class="clearfix"><h3>Status</h3><a href="#" data-value_id="" class="clear clear_show">Clear</a></div><ul><li class="fil_val selected"><a href="#" data-value_id="current-only">Current</a><span class="fcount">(1)</span></li></ul></li></ul><div id="chr-location-facet-wrapper" data-bid="MCID_67da10f34f3d5e000d897fd3" data-hid="MCID_67d9f06cb98da1549268b4db" data-qky="2618" class="disabled" style="display:none"><ul class="facet" data-filter_id="chromosomal-region" id="_chromosomal-region" data-of="yes"><li class="filter_grp of_grp"><div class="clearfix"><h3>Chromosome locations</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><a id="facet_ofchromosomal-region" href="#facet_of_divchromosomal-region" class="jig-ncbipopper" data-jigconfig="triggerPosition: 'middle right', destPosition: 'middle left', hasArrow: true, arrowDirection: 'left', closeEvent : 'click', openEvent: 'click', adjustFit: 'autoAdjust', openAnimation: 'none', closeAnimation: 'none', addCloseButton:true, width: '375px'" data-value_id="fetch_more">more...</a><div id="facet_of_divchromosomal-region" style="display:none;" class="of_popup"><h4>Chromosome locations</h4><label for="organism-filter" style="width:100%;margin-bottom:.2em;" class="">Select an organism by typing or scrolling</label><input type="text" placeholder="Enter text to narrow down the list" id="organism-filter" style="width:98%;" autocomplete="off" /><br /><div id="chr-region-tax-list"><select id="of_chromosomal-region" size="9" class="chr-region-tax-list" style="width:100%;"></select></div><div id="chr-location-info-ctrl" data-disabled="disabled"><div class="chr-field"><label for="chr-name">Chromosome</label><br /><select id="chr-name" class="chr-field" disabled="disabled"></select></div><div class="chr-field"><label for="chr-from">From</label><br /><input type="text" name="chr-from" id="chr-from" disabled="disabled" class="chr-field" /></div><div class="chr-field"><label for="chr-to">To</label><br /><input type="text" name="chr-to" id="chr-to" disabled="disabled" class="chr-field" /></div></div><div class="actions clearfix"><button class="jig-ncbibutton of_add apply-chr" data-jigconfig="'color': 'ui-ncbibutton-blue'">Apply</button></div></div></ul></li></ul></div><ul class="facet facet_reset"><li><a href="#" data-value_id="reset">Clear all</a></li></ul><ul class="facet_tools"><li><a id="more_filter_groups_link" href="#more_filter_groups" class="jig-ncbipopper" data-jigconfig="triggerPosition: 'middle right', destPosition: 'top left', hasArrow: true, arrowDirection: 'left', closeEvent : 'click', openEvent: 'click', adjustFit: 'autoAdjust', openAnimation: 'none', closeAnimation: 'none', addCloseButton:true, width: '180px'">
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<h1 class="title" id="gene-name"><span class="gn" style="padding-right:.5em;">aroH</span> chorismate mutase [ <em class="tax">Bacillus subtilis subsp. subtilis str. 168</em>
]
</h1>
<span class="geneid">Gene ID: 939005, updated on
6-Oct-2023</span>
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<dl id="summaryDl">
<dt class="noline"> Gene symbol </dt>
<dd class="noline">aroH</dd>
<dt> Gene description </dt>
<dd>chorismate mutase</dd>
<dt>Locus tag</dt>
<dd>BSU_22690</dd>
<dt>Gene type</dt>
<dd>protein coding</dd>
<dt>RefSeq status</dt>
<dd>PROVISIONAL</dd>
<dt>Organism</dt>
<dd class="tax">
<a href="/Taxonomy/Browser/wwwtax.cgi?id=224308" ref="ordinalpos=1&amp;ncbi_uid=939005&amp;link_uid=224308">Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis) </a>
</dd>
<dt>Lineage</dt>
<dd class="tax">Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus</dd>
<dt>Old locus tag</dt>
<dd>BSU22690</dd>
<dt style="padding-top:.5em;">
<span class="new-icon">NEW</span>
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<strong>Try the new <a href="https://www.ncbi.nlm.nih.gov/datasets/gene/id/939005/" data-ga-category="summary" data-ga-action="click_datasets_link" data-ga-label="gene_table" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report.">Gene table</a></strong>
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<dl class="dl-chr-info">
<dt>Sequence:</dt>
<dd>NC_000964.3 (2377632..2378015, complement)</dd>
</dl>
</div>
<p class="withnote margin_t2em"><strong>NC_000964.3</strong><img usemap="#nbrMap939005_255767013" border="0" alt="Genomic Context describing neighboring genes" src="/gutils/geneneighb.fcgi?geneid=939005&amp;nuc_gi=255767013&amp;n0=trpC&amp;n1=trpD&amp;n2=trpE&amp;n3=aroH&amp;n4=aroB&amp;n5=aroF&amp;n6=cheR" /><map name="nbrMap939005_255767013" id="nbrMap939005_255767013">
<area shape="rect" onMouseOver="showtip(this,event,'pseudo')" onMouseOut="hidetip()" coords="42,23,103,31" alt="Neighboring gene pseudo" href="/gene/37862895" />
<area shape="rect" onMouseOver="showtip(this,event,'anthranilate phosphoribosyltransferase')" onMouseOut="hidetip()" coords="80,35,154,43" alt="Neighboring gene anthranilate phosphoribosyltransferase" href="/gene/939007" />
<area shape="rect" onMouseOver="showtip(this,event,'anthranilate synthase')" onMouseOut="hidetip()" coords="131,23,233,31" alt="Neighboring gene anthranilate synthase" href="/gene/939008" />
<area shape="rect" onMouseOver="showtip(this,event,'3-dehydroquinate synthase')" onMouseOut="hidetip()" coords="241,23,319,31" alt="Neighboring gene 3-dehydroquinate synthase" href="/gene/939001" />
<area shape="rect" onMouseOver="showtip(this,event,'chorismate synthase')" onMouseOut="hidetip()" coords="297,35,380,43" alt="Neighboring gene chorismate synthase" href="/gene/939000" />
<area shape="rect" onMouseOver="showtip(this,event,'methyl-accepting chemotaxis proteins (MCPs) methyltransferase')" onMouseOut="hidetip()" coords="361,23,423,31" alt="Neighboring gene methyl-accepting chemotaxis proteins (MCPs) methyltransferase" href="/gene/939003" />
</map>
</p>
</div>
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<div class="rprt-section gene-genomic-regions-transcripts-products">
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<dl class="dl-chr-info" style="margin-top:-1.2em">
<dt>Genomic Sequence: </dt>
<dd id="single-gen-accession" data-accession="NC_000964.3_2377631_2378014">NC_000964.3 </dd>
</dl>
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<strong>Go to nucleotide:</strong>
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<a href="#" class="jig-ncbitoggler-open">Related articles in PubMed</a>
</h3>
<div class="generefbl-link">
<ol class="generef-link">
<li>
<a href="/pubmed/25422475/" ref="ordinalpos=1&amp;ncbi_uid=939005&amp;link_uid=25422475">Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis.</a>
<span class="pubmed-auth-date"> Burschowsky D, <em>et al</em>. Proc Natl Acad Sci U S A, 2014 Dec 9. PMID 25422475, <span class="pubmed-pmc-link"><a href="/pmc/articles/PMC4267393/" ref="ordinalpos=0&amp;ncbi_uid=939005&amp;link_uid=PMC4267393">Free PMC Article</a></span></span>
</li>
<li>
<a href="/pubmed/29280348/" ref="ordinalpos=2&amp;ncbi_uid=939005&amp;link_uid=29280348">Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement.</a>
<span class="pubmed-auth-date"> Borriss R, <em>et al</em>. Microb Biotechnol, 2018 Jan. PMID 29280348, <span class="pubmed-pmc-link"><a href="/pmc/articles/PMC5743806/" ref="ordinalpos=0&amp;ncbi_uid=939005&amp;link_uid=PMC5743806">Free PMC Article</a></span></span>
</li>
<li>
<a href="/pubmed/23429746/" ref="ordinalpos=3&amp;ncbi_uid=939005&amp;link_uid=23429746">An updated metabolic view of the Bacillus subtilis 168 genome.</a>
<span class="pubmed-auth-date"> Belda E, <em>et al</em>. Microbiology (Reading), 2013 Apr. PMID 23429746</span>
</li>
<li>
<a href="/pubmed/19383706/" ref="ordinalpos=4&amp;ncbi_uid=939005&amp;link_uid=19383706">From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later.</a>
<span class="pubmed-auth-date"> Barbe V, <em>et al</em>. Microbiology (Reading), 2009 Jun. PMID 19383706, <span class="pubmed-pmc-link"><a href="/pmc/articles/PMC2885750/" ref="ordinalpos=0&amp;ncbi_uid=939005&amp;link_uid=PMC2885750">Free PMC Article</a></span></span>
</li>
<li>
<a href="/pubmed/9384377/" ref="ordinalpos=5&amp;ncbi_uid=939005&amp;link_uid=9384377">The complete genome sequence of the gram-positive bacterium Bacillus subtilis.</a>
<span class="pubmed-auth-date"> Kunst F, <em>et al</em>. Nature, 1997 Nov 20. PMID 9384377</span>
</li>
</ol>
</div>
</div>
<div class="generif-pubmed generif">
<h3 id="generifsgenereferencesintofunctions">
<a href="#" class="jig-ncbitoggler-open">GeneRIFs: Gene References Into Functions</a>
</h3>
<div>
<a href="/gene/about-generif" class="whatisthis">What's a GeneRIF?</a>
<div class="generefbl-link">
<ol class="generef-link">
<li class="gene-rif-popper">
<a href="/pubmed/25422475" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&amp;ncbi_uid=939005&amp;link_uid=25422475">the chemical basis for efficient chorismate mutase catalysis is electrostatic transition state stabilization rather than reactant destabilization</a>
<div id="gene-popper1" class="gene-rif-popper">Title: Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis.</div>
</li>
</ol>
</div>
<div class="submit-genrif">
<span>Submit:</span>
<a href="/gene/submit-generif/?geneId=939005&amp;sym=aroH&amp;name=&amp;org=Bacillus subtilis subsp. subtilis str. 168">New GeneRIF</a>
<a href="/RefSeq/update.cgi?geneid=939005&amp;symbol=aroH;task=fixpub">Correction</a>
</div>
</div>
</div>
</div>
</div>
<div class="rprt-section gene-pathways">
<section class="rprt-section-header" id="pathways">
<h2 id="header-pathways">
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-pathways .rprt-section-body'">
<span class="ui-ncbitoggler-master-text">Pathways from PubChem</span>
</a>
</h2>
<div class="rprt-section-tools">
<a href="#top" title="Go to the top of the page" class="gene-top-page">
<span>Go to the top of the page</span>
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<iframe title="Pathways in which the gene target is involved" class="pubchem-widget" scrolling="no" src="https://pubchem.ncbi.nlm.nih.gov/gene/939005#section=Pathways&amp;embed=true&amp;hide_all_headings=true&amp;page_size=25" style="border: 0; width: 100%;"></iframe>
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<div class="rprt-section gene-general-gene-info">
<section class="rprt-section-header" id="general-gene-info">
<h2 id="header-general-gene-info">
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-general-gene-info .rprt-section-body'">
<span class="ui-ncbitoggler-master-text">General gene information</span>
</a>
</h2>
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<span>Go to the top of the page</span>
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<div class="rprt-section-body" style="">
<div></div>
<div class="infosec">
<h3 id="homology">
<a class="jig-ncbitoggler-open">Homology</a>
</h3>
<ul class="geneinfo-subsec">
<a href="https://www.orthodb.org/?ncbi=939005" ref="itool=Gene_FullReport&amp;uid=939005&amp;nlmid=&amp;db=gene&amp;log$=linkoutlink&amp;PrId=8178" target="_blank">
Orthologs from OrthoDB
</a>
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</div>
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</div>
<div class="rprt-section gene-general-protein-info">
<section class="rprt-section-header" id="general-protein-info">
<h2 id="header-general-protein-info">
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-general-protein-info .rprt-section-body'">
<span class="ui-ncbitoggler-master-text">General protein information</span>
</a>
</h2>
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<span>Go to the top of the page</span>
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<span>Help</span>
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</div>
</section>
<div class="rprt-section-body">
<dl>
<dt>Preferred Names</dt>
<dd>chorismate mutase</dd>
</dl>
<dl>
<dt class="heading">NP_390150.1</dt>
<dd>
<ul class="geneinfo-subsec">
<li>EC <a href="http://enzyme.expasy.org/EC/5.4.99.5">5.4.99.5</a></li>
</ul>
<ul class="geneinfo-subsec">
<li>Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 2105742, 8378335, 9384560, 10818343, 15865424, 16060652, 28743924; Product type e: enzyme </li>
</ul>
</dd>
</dl>
</div>
</div>
<div class="rprt-section gene-reference-sequences">
<section class="rprt-section-header" id="reference-sequences">
<h2 id="header-reference-sequences">
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-reference-sequences .rprt-section-body'">
<span class="ui-ncbitoggler-master-text">NCBI Reference Sequences (RefSeq)</span>
</a>
</h2>
<div class="rprt-section-tools">
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<span>Go to the top of the page</span>
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<span>Help</span>
</a>
</div>
</section>
<div class="rprt-section-body">
<p>
<span class="new-icon">NEW</span>
<strong>Try the new <a href="/datasets/tables/genes/?table_type=transcripts&amp;ids=939005&amp;utm_source=gene&amp;utm_medium=referral&amp;utm_campaign=refseq" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report." data-ga-category="refseq" data-ga-action="click_datasets_link" data-ga-label="transcript_table">Transcript table</a></strong>
</p>
<h3 class="genomerefseqs gene_std_toggler" id="annotatedrefseq-title">
<a class="jig-ncbitoggler-open">Genome Annotation</a>
</h3>
<div class="genomerefseqs_slave">
<p class="desc"> The following sections contain reference sequences that belong to a
specific genome build. <a href="#" id="expl-genomes">Explain</a></p>
<p id="expl-genomes-desc" style="display:none">This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.</p>
<h3 id="refseq-sequencedescription-p21565184">Reference assembly</h3>
<h4 id="genomic-p21565184">Genomic </h4>
<ol>
<li>
<p>NC_000964.3 Reference assembly</p>
<dl>
<dt>Range</dt>
<dd class="rs-range">
<span>2377632..2378015 complement</span>
</dd>
<dt>Download</dt>
<dd><a href="/nuccore/NC_000964.3?from=2377632&amp;to=2378015&amp;report=genbank&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=939005&amp;link_uid=NC_000964.3?from=2377632&amp;to=2378015&amp;report=genbank&amp;strand=true">GenBank</a>, <a href="/nuccore/NC_000964.3?from=2377632&amp;to=2378015&amp;report=fasta&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=939005&amp;link_uid=NC_000964.3?from=2377632&amp;to=2378015&amp;report=fasta&amp;strand=true">FASTA</a>, <a href="/nuccore/NC_000964.3?from=2377574&amp;to=2378071&amp;report=graph&amp;content=5&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=939005&amp;link_uid=NC_000964.3?from=2377574&amp;to=2378071&amp;report=graph&amp;content=5&amp;strand=true">Sequence Viewer (Graphics)</a></dd>
</dl>
</li>
</ol>
<h4 id="mrnaandproteins-p62831712">mRNA and Protein(s) </h4>
<ol>
<li>
<p><a href="/protein/NP_390150.1">NP_390150.1</a> chorismate mutase [Bacillus subtilis subsp. subtilis str. 168]</p>
<p>
<a href="/ipg/NP_390150.1/" ref="ncbi_uid=939005">See identical proteins and their annotated locations for NP_390150.1</a>
</p>
<p style="background:#fff; margin-top:1em;">Status: PROVISIONAL</p>
<dl>
<dt>UniProtKB/TrEMBL</dt>
<dd><a href="https://www.uniprot.org/uniprot/A3F3D2" ref="itool=Gene_FullReport&amp;PrId=5380&amp;uid=939005&amp;nlmid=&amp;db=gene">A3F3D2</a>, <a href="https://www.uniprot.org/uniprot/A3F3M7" ref="itool=Gene_FullReport&amp;PrId=5380&amp;uid=939005&amp;nlmid=&amp;db=gene">A3F3M7</a></dd>
<dt class="clear"> Conserved Domains (1) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_390150.1">summary</a></dt>
<dd>
<dl class="level2">
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=226835">COG4401</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">1</span><span class="cddto">125</span></dt>
<dd class="clearfix"> AroH; Chorismate mutase [Amino acid transport and metabolism]</dd>
</dl>
</dd>
</dl>
</li>
</ol>
</div>
</div>
</div>
<div class="rprt-section gene-related-sequences">
<section class="rprt-section-header" id="related-sequences">
<h2 id="header-related-sequences">
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-related-sequences .rprt-section-body'">
<span class="ui-ncbitoggler-master-text">Related sequences</span>
</a>
</h2>
<div class="rprt-section-tools">
<a href="#top" title="Go to the top of the page" class="gene-top-page">
<span>Go to the top of the page</span>
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<a href="/books/NBK3841/#EntrezGene.Related_Sequences" title="Help" class="gene-section-help">
<span>Help</span>
</a>
</div>
</section>
<div class="rprt-section-body">
<div>
<table id="proteinTblId" class="jig-ncbiservergrid" data-jigconfig="webservice:'/gene/939005/data/related-sequences/',webserviceParams: 'p$l=Ajax', isServersideLoad:true, isServersidePaging: true,isServersidePagingCached: true,pageSize:25">
<thead>
<tr>
<th colspan="2" id="rs-nucleo">Nucleotide</th>
<th rowspan="2" id="rs-protein">Protein</th>
</tr>
<tr>
<th id="rs-heading">Heading</th>
<th id="rs-heading-acc">Accession and Version</th>
</tr>
</thead>
<tbody></tbody>
</table>
<table id="proteinTblId" class="jig-ncbigrid" data-jigconfig="isPageable:true, pageSize:25">
<thead>
<tr>
<th class="proteinTblTh" rowspan="2" id="rs-prot-acc">Protein Accession</th>
<th class="proteinTblTh" colspan="2" id="rs-link">Links</th>
</tr>
<tr>
<th id="rs-genepept">GenPept Link</th>
<th id="rs-uniprot">UniProtKB Link</th>
</tr>
</thead>
<tbody>
<tr>
<td headers="rs-prot-acc">P19080.2</td>
<td headers="rs-link rs-genepept"></td>
</tr>
</tbody>
</table>
</div>
</div>
</div>
<div class="rprt-section gene-additional-links">
<section class="rprt-section-header" id="additional-links"><h2 id="header-additional-links"><a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-additional-links .rprt-section-body'"><span class="ui-ncbitoggler-master-text">Additional links</span></a></h2><div class="rprt-section-tools"><a href="#top" title="Go to the top of the page" class="gene-top-page"><span>Go to the top of the page</span></a><a href="/books/NBK3841/#EntrezGene.Additional_Links" title="Help" class="gene-section-help"><span>Help</span></a></div></section>
<div class="rprt-section-body" style="">
<h3 class="withnote" id="genelinkout">
<a class="jig-ncbitoggler">Gene LinkOut</a>
</h3><div>
<p>The following <a href="https://www.ncbi.nlm.nih.gov/projects/linkout/index.html">LinkOut</a> resources are supplied by external providers. These providers are responsible for maintaining the links. </p>
<div>
<div class="linkout">
<a class="jig-ncbitoggler-open main">
<span>Other Literature Sources</span>
</a>
<ul>
<li><span class="free-rsc"></span>Dryad Digital Repository</li>
<ul>
<li>
<a target="_blank" href="https://datadryad.org/stash/dataset/doi:10.5061/dryad.b8226" ref="itool=Gene_FullReport&amp;uid=939005&amp;nlmid=&amp;db=gene&amp;log$=linkoutlink&amp;PrId=7893">
<span>Dryad Digital Repository</span>
</a>
</li>
</ul>
</ul>
</div>
<div class="linkout">
<a class="jig-ncbitoggler-open main">
<span>Molecular Biology Databases</span>
</a>
<ul>
<li><span class="free-rsc"></span>Kyoto Encyclopedia of Genes and Genomes</li>
<ul>
<li>
<a target="_blank" href="http://www.genome.jp/dbget-bin/www_bget?bsu:BSU22690" ref="itool=Gene_FullReport&amp;uid=939005&amp;nlmid=&amp;db=gene&amp;log$=linkoutlink&amp;PrId=5174">
<span>bsu:BSU22690</span>
</a>
</li>
</ul>
<li><span class="free-rsc"></span>OMA Browser: Orthologous MAtrix</li>
<ul>
<li>
<a target="_blank" href="https://omabrowser.org/oma/info/BACSU02360/" ref="itool=Gene_FullReport&amp;uid=939005&amp;nlmid=&amp;db=gene&amp;log$=linkoutlink&amp;PrId=9822">
<span>OMA Browser: Orthologous MAtrix</span>
</a>
</li>
</ul>
<li><span class="free-rsc"></span>OrthoDB catalog of orthologs</li>
<ul>
<li>
<a target="_blank" href="https://www.orthodb.org/?ncbi=939005" ref="itool=Gene_FullReport&amp;uid=939005&amp;nlmid=&amp;db=gene&amp;log$=linkoutlink&amp;PrId=8178">
<span>Orthologs</span>
</a>
</li>
</ul>
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<h2 class="offscreen_noflow">Supplemental Content</h2>
<div id="gene-sidebar">
<div>
<div class="portlet brieflink dis-table-of-contents">
<div class="portlet_head">
<div class="portlet_title">
<h3>Table of contents</h3>
</div>
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_TableOfContents.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_TableOfContents" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_TableOfContents.Shutter"></a>
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<ul>
<li class="">
<a href="#summary">Summary</a>
</li>
<li class="">
<a href="#genomic-context">Genomic context</a>
</li>
<li class="">
<a href="#genomic-regions-transcripts-products">Genomic regions, transcripts, and products</a>
</li>
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<a href="#bibliography">Bibliography</a>
</li>
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<a href="#pathways">Pathways from PubChem</a>
</li>
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<a href="#general-gene-info">General gene information</a>
<div class="subsection-links">
<a href="#homology">Homology</a>
</div>
</li>
<li class="">
<a href="#general-protein-info">General protein information</a>
</li>
<li class="">
<a href="#reference-sequences">NCBI Reference Sequences (RefSeq)</a>
</li>
<li class="">
<a href="#related-sequences">Related sequences</a>
</li>
<li class="">
<a href="#additional-links">Additional links</a>
</li>
</ul>
</div>
</div>
<div class="portlet brieflink dis-genomesbrowser brieflink dis-genomesbrowser">
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<div class="portlet_content DiscoveryDbLinks">
<ul>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/structure?LinkName=gene_structure&amp;from_uid=939005" ref="log$=recordlinks">3D structures</a>
<div class="brieflinkpop offscreen_noflow">3D structure of a gene</div>
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<a class="brieflinkpopperctrl" href="/bioproject?LinkName=gene_bioproject&amp;from_uid=939005" ref="log$=recordlinks">BioProjects</a>
<div class="brieflinkpop offscreen_noflow">BioProjects related to a gene</div>
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<a class="brieflinkpopperctrl" href="/biosystems?LinkName=gene_biosystems&amp;from_uid=939005" ref="log$=recordlinks">BioSystems</a>
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<a class="brieflinkpopperctrl" href="/cdd?LinkName=gene_cdd&amp;from_uid=939005" ref="log$=recordlinks">Conserved Domains</a>
<div class="brieflinkpop offscreen_noflow">Related CDD</div>
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<a class="brieflinkpopperctrl" href="/pmc?LinkName=gene_pmc&amp;from_uid=939005" ref="log$=recordlinks">Full text in PMC</a>
<div class="brieflinkpop offscreen_noflow">PMC links</div>
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<a class="brieflinkpopperctrl" href="/pmc?LinkName=gene_pmc_nucleotide&amp;from_uid=939005" ref="log$=recordlinks">Full text in PMC_nucleotide</a>
<div class="brieflinkpop offscreen_noflow">Full text in PubMedCentral identified from shared sequence links</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/sparcle?LinkName=gene_sparcle&amp;from_uid=939005" ref="log$=recordlinks">Functional Class</a>
<div class="brieflinkpop offscreen_noflow">Functional class of the sequence domain architecture</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/gene?LinkName=gene_gene_neighbors&amp;from_uid=939005" ref="log$=recordlinks">Gene neighbors</a>
<div class="brieflinkpop offscreen_noflow">Overlapping genes and two nearest non-overlapping genes on either side</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/genome?LinkName=gene_genome&amp;from_uid=939005" ref="log$=recordlinks">Genome</a>
<div class="brieflinkpop offscreen_noflow">Related Genome</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/geoprofiles?LinkName=gene_geoprofiles&amp;from_uid=939005" ref="log$=recordlinks">GEO Profiles</a>
<div class="brieflinkpop offscreen_noflow">Related GEO</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/nuccore?LinkName=gene_nuccore&amp;from_uid=939005" ref="log$=recordlinks">Nucleotide</a>
<div class="brieflinkpop offscreen_noflow">Link to related Nucleotide entry</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/protein?LinkName=gene_protein&amp;from_uid=939005" ref="log$=recordlinks">Protein</a>
<div class="brieflinkpop offscreen_noflow">Link to related protein entry</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed&amp;from_uid=939005" ref="log$=recordlinks">PubMed</a>
<div class="brieflinkpop offscreen_noflow">Link to related PubMed entry</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed_rif&amp;from_uid=939005" ref="log$=recordlinks">PubMed (GeneRIF)</a>
<div class="brieflinkpop offscreen_noflow">Link to related PubMed article from GeneRIFs</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed_pmc_nucleotide&amp;from_uid=939005" ref="log$=recordlinks">PubMed(nucleotide/PMC)</a>
<div class="brieflinkpop offscreen_noflow">Citations in PubMed identified from shared sequence and PMC links.</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/protein?LinkName=gene_protein_refseq&amp;from_uid=939005" ref="log$=recordlinks">RefSeq Proteins</a>
<div class="brieflinkpop offscreen_noflow">Link to Protein RefSeqs</div>
</li>
<li class="brieflinkpopper">
<a class="brieflinkpopperctrl" href="/taxonomy?LinkName=gene_taxonomy&amp;from_uid=939005" ref="log$=recordlinks">Taxonomy</a>
<div class="brieflinkpop offscreen_noflow">Link to related taxonomy entry</div>
</li>
</ul>
</div>
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<a href="/pmc/?term=PMC4383897+OR+PMC3013746+OR+PMC1761442+OR+PMC539985">About Gene</a>
</li>
<li>
<a href="/books/NBK3840">FAQ</a>
</li>
<li>
<a href="https://ftp.ncbi.nlm.nih.gov/gene/">FTP site</a>
</li>
<li>
<a href="/books/NBK3841/">Help</a>
</li>
<li>
<a href="/books/NBK3842/">My NCBI help</a>
</li>
<li>
<a href="/books/NBK21085/">NCBI Handbook</a>
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<li>
<a href="/gene/statistics/">Statistics</a>
</li>
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<h3>Related sites</h3>
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<a href="https://www.ncbi.nlm.nih.gov/BLAST">BLAST</a>
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<a href="https://www.ncbi.nlm.nih.gov/genome">Genome</a>
</li>
<li>
<a href="https://www.ncbi.nlm.nih.gov/bioproject">BioProject</a>
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<a href="https://www.ncbi.nlm.nih.gov/genome/gdv/">Genome Data Viewer</a>
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<a href="https://www.ncbi.nlm.nih.gov/geo">GEO</a>
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<a href="https://www.ncbi.nlm.nih.gov/omim">OMIM</a>
</li>
<li>
<a href="https://www.ncbi.nlm.nih.gov/probe">Probe</a>
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<a href="https://www.ncbi.nlm.nih.gov/RefSeq">RefSeq</a>
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<a href="https://www.ncbi.nlm.nih.gov/RefSeq/update.cgi?geneid=939005&amp;symbol=aroH">Submit Correction</a>
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<a href="/gene/submit-generif?geneId=939005&amp;sym=aroH&amp;name=chorismate mutase&amp;org=Bacillus subtilis subsp. subtilis str. 168">Submit GeneRIF</a>
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<a class="htb ralinkpopperctrl" ref="log$=activity&amp;linkpos=1" href="/portal/utils/pageresolver.fcgi?recordid=67da10f367c23b31e0d00211">aroH [Bacillus subtilis subsp. subtilis str. 168]</a>
<div class="ralinkpop offscreen_noflow">aroH [Bacillus subtilis subsp. subtilis str. 168]<div class="brieflinkpopdesc">Gene ID:939005</div></div>
<div class="tertiary">Gene</div>
</li>
<li class="ra_rcd ralinkpopper two_line">
<a class="htb ralinkpopperctrl" ref="log$=activity&amp;linkpos=2" href="/portal/utils/pageresolver.fcgi?recordid=67da10f12f30673f7b1c23cc">chorismate mutase [Bacillus subtilis subsp. subtilis str. 168]</a>
<div class="ralinkpop offscreen_noflow">chorismate mutase [Bacillus subtilis subsp. subtilis str. 168]<div class="brieflinkpopdesc">gi|16079326|ref|NP_390150.1|</div></div>
<div class="tertiary">Protein</div>
</li>
<li class="ra_rcd ralinkpopper two_line">
<a class="htb ralinkpopperctrl" ref="log$=activity&amp;linkpos=3" href="/portal/utils/pageresolver.fcgi?recordid=67da10e967c23b31e0cfe15b">PMM1 phosphomannomutase 1 [Homo sapiens]</a>
<div class="ralinkpop offscreen_noflow">PMM1 phosphomannomutase 1 [Homo sapiens]<div class="brieflinkpopdesc">Gene ID:5372</div></div>
<div class="tertiary">Gene</div>
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<li class="ra_rcd ralinkpopper two_line">
<a class="htb ralinkpopperctrl" ref="log$=activity&amp;linkpos=4" href="/portal/utils/pageresolver.fcgi?recordid=67da10e367c23b31e0cfceb2">rfbK [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]</a>
<div class="ralinkpop offscreen_noflow">rfbK [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]<div class="brieflinkpopdesc">Gene ID:1253604</div></div>
<div class="tertiary">Gene</div>
</li>
<li class="ra_rcd ralinkpopper two_line">
<a class="htb ralinkpopperctrl" ref="log$=activity&amp;linkpos=5" href="/portal/utils/pageresolver.fcgi?recordid=67da10e167c23b31e0cfca8f">phosphomannomutase [Salmonella enterica subsp. enterica serovar Typhimurium str....</a>
<div class="ralinkpop offscreen_noflow">phosphomannomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]<div class="brieflinkpopdesc">gi|16765413|ref|NP_461028.1|</div></div>
<div class="tertiary">Protein</div>
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