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141 lines
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12 KiB
XML
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head><meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
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<title>GEO DataSet Browser</title>
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<link rel="stylesheet" type="text/css" href="/core/extjs/ext-2.1/resources/css/ext-all.css" />
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<meta name="author" content="geo" />
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<meta name="keywords" content="GDS, GEO DataSets, GEO, Gene Expression Omnibus, NCBI, National Center for Biotechnology Information" />
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<meta name="description" content="Comparable experimental sample sets assembled from the Gene Expression Omnibus (GEO) repository." />
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<script type="text/javascript" src="/geo/js/jquery.min.js"></script>
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<meta name="ncbi_app" content="gdsbrowser" /><meta name="ncbi_db" content="Gds" /><meta name="ncbi_term" content="GDS3604[ACCN]" /><meta name="ncbi_pagesize" content="20" /><meta name="ncbi_sortorder" content="" /><meta name="ncbi_pageno" content="1" /><meta name="ncbi_resultcount" content="1" /><meta name="ncbi_pdid" content="gdsbrowser" /><meta name="ncbi_sessionid" content="CE8B5AF87C7FFCB1_0191SID" />
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<link rel="shortcut icon" href="//www.ncbi.nlm.nih.gov/favicon.ico" /><meta name="ncbi_phid" content="CE8C90CA7D2933710000000000150010.m_9" /><script type="text/javascript"><!--
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var ScriptPath = '/portal/';
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"children":[{"name":"GDSBrowser_L.GDSBrowser_C.GDSBrowserMeta","type":"Portlet","realname":"GDSBrowser_L.GDSBrowser_C.GDSBrowserMeta","shortname":"GDSBrowserMeta"},
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{"name":"GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery","type":"Portlet","realname":"GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery","shortname":"GDSBrowserQuery"},
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{"name":"GDSBrowser_L.GDSBrowser_C.GDSBrowserPager","type":"Portlet","realname":"GDSBrowser_L.GDSBrowser_C.GDSBrowserPager","shortname":"GDSBrowserPager"},
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{"name":"GDSBrowser_L.GDSBrowser_C.DatasetTable_C","type":"Cluster","realname":"GDSBrowser_L.GDSBrowser_C.DatasetTable_C",
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"children":[{"name":"GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetXML","type":"Portlet","realname":"GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetXML","shortname":"DatasetXML"},
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{"name":"GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable","type":"Portlet","realname":"GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable","shortname":"DatasetTable"}]},
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{"name":"GDSBrowser_L.GDSBrowser_C.GDSBrowserFooter","type":"Portlet","realname":"GDSBrowser_L.GDSBrowser_C.GDSBrowserFooter","shortname":"GDSBrowserFooter"}]}]};
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--></script>
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<meta name='referrer' content='origin-when-cross-origin'/><link type="text/css" rel="stylesheet" href="//static.pubmed.gov/portal/portal3rc.fcgi/4199987/css/4874/4955/3251144/186073/3251483/5182.css" /><script type="text/javascript">
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var ObjectLinks=[{i:0, ename: "p$ExL", esid:"*", sname: "p$ExL", ssid:"*", dname:"p$el", dsid:"0",m:"CopyValue",p:[],f: function(src, dst) {fn_CopyValue(src, dst);}}]
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var ActiveNames = {"p$ExL":1, "GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.DetailedView":0, "GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.HiddenGDS":0, "GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.Sort":0, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Clear":0, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Search":1, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.ShowAll":1, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Term":0};
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</script></head>
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<body>
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<div id="all">
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<div id="header">
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<div id="ncbi-image">
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<a href="/">
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<img width="145" height="66" border="0" alt="National Center for Biotechnology Information (NCBI)" src="/geo/img/ncbi_logo.gif" />
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</a>
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</div>
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<div id="gds-image">
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<a href="/sites/GDSbrowser/">
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<img alt="GEO DataSet Browser" src="/geo/img/GDSbrowser_logo.png" />
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</a>
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</div>
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<div id="geo-image">
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<a href="/geo/">
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<img border="0" alt="Gene Expression Omnibus (GEO)" src="/geo/img/geo_main.gif" />
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</a>
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</div>
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</div>
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<div id="main">
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<form enctype="application/x-www-form-urlencoded" name="GDSBrowserQuery" method="post" onsubmit="return false;" action="/sites/GDSbrowser" id="GDSBrowserQuery">
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<div id="query">
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<table summary="Query bar components">
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<tr>
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<td>
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<div id="search_bar"><label for="term">Search for </label><input name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Term" sid="1" type="text" id="term" value="GDS3604[ACCN]" size="45" /> <button name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Search" sid="1" id="SearchButton" submit="yes">Search</button> <button name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Clear" sid="1" id="ClearButton">Clear</button> <button name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.ShowAll" sid="1" id="ShowAll" submit="yes">Show All</button> <a class="button" href="/gds?term=gds[filter]">Advanced Search</a></div>
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</td>
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<td class="paging">
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</td>
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</tr>
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<tr>
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<td>
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</td>
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<td class="paging">
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</td>
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</tr>
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</table>
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</div>
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<div><input name="GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.Sort" sid="1" type="hidden" value="" /><input name="GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.HiddenGDS" sid="1" type="hidden" value="3604" /><input name="GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.DetailedView" sid="1" type="hidden" value="analysis" /></div>
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<input type="hidden" name="p$a" id="p$a" /><input type="hidden" name="p$l" id="p$l" value="GDSBrowser_L" /><input type="hidden" name="p$st" id="p$st" value="GDSbrowser" /><input name="SessionId" id="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" id="Snapshot" value="/projects/GEO/GDSBrowser@1.51" disabled="disabled" type="hidden" /></form>
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<div id="details"><table id="gds_details" class="gds_panel" summary="GEO DataSet Details"><tr class="caption"><th colspan="5">
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DataSet Record GDS3604:
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<a href="/geoprofiles?term=GDS3604[ACCN]" target="_blank" class="button" title="View Expression Profiles">
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Expression Profiles
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</a><a href="#details" class="button" onclick="displayAnalysis(3604); return true" title="Data Analysis Tools">
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Data Analysis Tools
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</a><a href="#details" class="button" onclick="displaySamples(3604); return true" title="Sample Subsets">
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Sample Subsets
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</a></th></tr><tr><th scope="row" class="not_caption">
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Title:
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</th><td colspan="3">Tamoxifen effect on endometrioid carcinomas </td><td id="detailsRightCol" rowspan="7"><fieldset><legend>Cluster Analysis</legend><a id="clusterLink" title="GDS3604 Cluster Analysis" href="/geo/gds/analyze/analyze.cgi?ID=GDS3604" target="_blank"><img alt="GDS3604 Cluster Image" width="80" height="80" src="/geo/img/UPGMA/UCorrelated/GDS3604i.png" /></a></fieldset><fieldset><legend>Download</legend><ul><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS3nnn/GDS3604/soft/GDS3604_full.soft.gz" title="Contains DataSet information, experiment variable subsets and expression value measurements (plain text, tab-delimited format)." class="dataset-soft-full">
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DataSet full SOFT file
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</a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS3nnn/GDS3604/soft/GDS3604.soft.gz" title="Contains DataSet information, experiment variable subsets, expression value measurements and up-to-date gene annotation for the DataSet Platform (plain text, tab-delimited format)." class="dataset-soft">
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DataSet SOFT file
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</a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3013/soft/GSE3013_family.soft.gz" title="Contains the complete, original, submitter-supplied records that form the basis of this DataSet (plain text, tab-delimited format)." class="series-family-soft">
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Series family SOFT file
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</a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3013/miniml/GSE3013_family.xml.tgz" title="Contains the complete, original, submitter-supplied records that form the basis of this DataSet (XML format)." class="series-family-miniml">
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Series family MINiML file
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</a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL8nnn/GPL8300/annot/GPL8300.annot.gz" title="Contains up-to-date gene annotation for the DataSet Platform (plain text, tab-delimited format)." class="annotation-soft">
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Annotation SOFT file
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</a></li></ul></fieldset></td></tr><tr><th scope="row" class="not_caption">
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Summary:
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</th><td colspan="3">Analysis of endometrial epithelial cells from stage I or II endometrioid carcinomas after treatment with oestrogen or tamoxifen (TMX). Results provide insight into the molecular basis of the association of TMX treatment of breast cancer with an increased incidence of endometrial cancer.</td></tr><tr><th scope="row" class="not_caption">Organism:
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</th><td colspan="3" class="species"><a target="_blank" href="/Taxonomy/Browser/wwwtax.cgi?mode=Undef&lvl=0&srchmode=1&name=Homo%20sapiens">Homo sapiens</a></td></tr><tr><th scope="row" class="not_caption">
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Platform:
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</th><td colspan="3"><a href="/geo/query/acc.cgi?acc=GPL8300" target="_blank">
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GPL8300</a>:
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[HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array</td></tr><tr><th scope="row" class="not_caption">Citation:</th><td colspan="3"><div class="PubmedCitation"><ul><li><span class="authors">Wu H, Chen Y, Liang J, Shi B et al. </span><span class="title">Hypomethylation-linked activation of PAX2 mediates tamoxifen-stimulated endometrial carcinogenesis. </span><span class="source">Nature</span> 2005 Dec 15;438(7070):981-7. PMID: <a title="Link to PubMed record" href="https://www.ncbi.nlm.nih.gov/pubmed/16355216">16355216</a></li></ul></div></td></tr><tr><th scope="row" class="not_caption">
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Reference Series:
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</th><td><a href="/geo/query/acc.cgi?acc=GSE3013" target="_blank">
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GSE3013</a></td><th id="samp-cnt" class="not_caption">
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Sample count:
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</th><td>7</td></tr><tr><th scope="row" class="not_caption">
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Value type:
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</th><td>count</td><th id="series-pub" class="not_caption">
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Series published:
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</th><td>2005/07/29</td></tr></table><div id="divExtra"></div></div>
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</div>
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<div id="footer">
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<ul>
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<li class="first"><a href="https://www.nlm.nih.gov/">NLM</a></li>
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<li><a href="https://www.nih.gov/">NIH</a></li>
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<li><a href="mailto:geo@ncbi.nlm.nih.gov">GEO Help</a></li>
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<li><a href="/geo/info/disclaimer.html">Disclaimer</a></li>
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<li><a href="https://www.nlm.nih.gov/accessibility.html">Accessibility</a></li>
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</ul>
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</div>
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</div>
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<script type="text/javascript" src="/portal/portal3rc.fcgi/rlib/js/InstrumentOmnitureBaseJS/InstrumentNCBIBaseJS/InstrumentPageStarterJS.js"></script>
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<script type="text/javascript">
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jQuery.getScript("/core/alerts/alerts.js", function () {
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galert(['div.nav_and_browser', 'div.header', '#universal_header', '#header'])
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});
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</script>
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<!-- CE8B5AF87C7FFCB1_0191SID /projects/GEO/GDSBrowser@1.51 portal105 v4.1.r689238 Tue, Oct 22 2024 16:10:51 -->
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<span id="portal-csrf-token" style="display:none" data-token="CE8B5AF87C7FFCB1_0191SID"></span>
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<script type='text/javascript' src='/portal/js/portal.js'></script><script type="text/javascript" src="//static.pubmed.gov/portal/portal3rc.fcgi/4199987/js/4962/4093349/4807/3867120/3251151.js" snapshot="GDSbrowser"></script></body>
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</html> |