nih-gov/www.ncbi.nlm.nih.gov/projects/msaviewer/demo/demo_consensus.html

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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<html>
<head>
<title>Consensus parameters demo</title>
<script type="text/javascript" src="../js/multialign.js"></script>
</head>
<body>
<h1>Consensus parameters demo</h1>
<p>This page demonstrates different modes of consensus processing for MSA Viewer</p>
<h3>Default - no consensus generated</h3>
<p>https://www.ncbi.nlm.nih.gov/projects/msaviewer/?url=data/YP.13.muscle.asn</p>
<div id="msaviewer_1" class="MultiAlignViewerApp" data-autoload style="max-height:600px">
<a href="?url=https://www.ncbi.nlm.nih.gov/projects/msaviewer/data/YP.13.muscle.asn&amp;appname=ncbi_msav_demo"></a>
</div>
<br>
<h3>Explicit parameter: generate consensus</h3>
<p>https://www.ncbi.nlm.nih.gov/projects/msaviewer/?url=data/YP.13.muscle.asn&amp;consensus=true</p>
<div id="msaviewer_2" class="MultiAlignViewerApp" data-autoload style="max-height:600px">
<a href="?url=https://www.ncbi.nlm.nih.gov/projects/msaviewer/data/YP.13.muscle.asn&amp;appname=ncbi_msav_demo&amp;consensus=true"></a>
</div>
<br>
<h3>Explicit parameter: don't generate consensus</h3>
<p>https://www.ncbi.nlm.nih.gov/projects/msaviewer/?url=data/YP.13.muscle.asn&amp;consensus=false</p>
<div id="msaviewer_3" class="MultiAlignViewerApp" data-autoload style="max-height:600px">
<a href="?url=https://www.ncbi.nlm.nih.gov/projects/msaviewer/data/YP.13.muscle.asn&amp;appname=ncbi_msav_demo&amp;consensus=false"></a>
</div>
<br>
<h3>Alignment with pre-calculated consensus: consensus always shown</h3>
<p>https://www.ncbi.nlm.nih.gov/projects/msaviewer/?url=data/dengue_cons_prot.asn</p>
<div id="msaviewer_4" class="MultiAlignViewerApp" data-autoload style="max-height:600px">
<a href="?url=https://www.ncbi.nlm.nih.gov/projects/msaviewer/data/dengue_cons_prot.asn&amp;appname=ncbi_msav_demo"></a>
</div>
</body>
</html>