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5 lines
No EOL
220 KiB
HTML
<?xml version="1.0" encoding="UTF-8"?>
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<html>
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<head>
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<meta http-equiv="content-type" content="text/html; charset=UTF-8" />
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<style type="text/css"> .textElement { font-family: Arial; font-size: 8pt; color: #800000; }</style>
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<style type="text/css"> .textAttr { font-family: Arial; font-size: 8pt; color: #FF0000; }</style>
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<style type="text/css"> .textContents { font-family: Arial; font-size: 8pt; color: #000000; }</style>
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<style type="text/css"> .textOperator { font-family: Arial; font-size: 8pt; color: #0000FF; }</style>
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<style type="text/css"> .schemaHeader { font-family: Arial; font-size: 11pt; color: #000000; }</style>
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<style type="text/css"> .schemaHeader2 { font-family: Arial; font-size: 11pt; font-weight: bold; color: #000000; }</style>
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<style type="text/css"> .elementHeader { font-family: Arial; font-size: 10pt; color: #000000; }</style>
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<style type="text/css"> .elementHeader2 { font-family: Arial; font-size: 10pt; font-weight: bold; color: #000000; }</style>
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<style type="text/css"> .schemaName { font-family: Arial; font-size: 8pt; font-weight: bold; color: #000000; }</style>
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<style type="text/css"> .schemaSubTitle { font-family: Arial; font-size: 8pt; color: #808080; }</style>
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<style type="text/css"> .schemaSubData { font-family: Arial; font-size: 8pt; color: #000000; }</style>
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<style type="text/css"> pre { margin-bottom: 0 }</style>
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</head>
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<body>
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<span class="schemaHeader">Schema </span>
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<span class="schemaHeader2">docsum_2005.xsd</span>
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<br />
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<br />
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<br />
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<table cellspacing="0" cellpadding="0">
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><span class="schemaSubTitle">schema location: </span></td>
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<td align="left" bgcolor="#FFFFFF"><a href="ftp://ftp.ncbi.nlm.nih.gov/snp/specs/docsum_2005.xsd"><span class="schemaName">ftp://ftp.ncbi.nlm.nih.gov/snp/specs/docsum_2005.xsd</span></a></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><span class="schemaSubTitle">attribute form default: </span></td>
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<td align="left" bgcolor="#FFFFFF"><span class="schemaName">unqualified</span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><span class="schemaSubTitle">element form default: </span></td>
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<td align="left" bgcolor="#FFFFFF"><span class="schemaName">qualified</span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><span class="schemaSubTitle">targetNamespace: </span></td>
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<td align="left" bgcolor="#FFFFFF"><span class="schemaName">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><span class="schemaSubTitle"> </span></td>
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<td align="left" bgcolor="#FFFFFF" />
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</tr>
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</table>
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<table cellspacing="0" cellpadding="0">
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><span class="schemaSubTitle">Elements </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_Assay_Link029A1F70"><span class="schemaName">Assay</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_Assembly_Link0299EB48"><span class="schemaName">Assembly</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_BaseURL_Link029A60A0"><span class="schemaName">BaseURL</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_Component_Link029AA368"><span class="schemaName">Component</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_ExchangeSet_Link02982650"><span class="schemaName">ExchangeSet</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_FxnSet_Link0299B008"><span class="schemaName">FxnSet</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_MapLoc_Link02996E80"><span class="schemaName">MapLoc</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_PrimarySequence_Link029A7C88"><span class="schemaName">PrimarySequence</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_RsLinkout_Link029A9DE0"><span class="schemaName">RsLinkout</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_RsStruct_Link029A8488"><span class="schemaName">RsStruct</span></a><span class="schemaName"> </span></td>
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</tr>
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<tr valign="top">
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<td align="left" bgcolor="#FFFFFF"><a href="#element_Ss_Link02990700"><span class="schemaName">Ss</span></a><span class="schemaName"> </span></td>
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</tr>
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</table>
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<br />
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<br />
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<a name="element_Assay_Link029A1F70" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map029A1F70"><area coords="155,260,218,281" href="#element_Method_Link029A2380" /><area coords="155,293,233,314" href="#element_Taxonomy_Link029A3788" /><area coords="155,326,210,364" href="#element_Strains_Link029A4B68" /><area coords="155,376,226,397" href="#element_Comment_Link029A4C88" /><area coords="155,409,213,447" href="#element_Citation_Link029A4DA8" /></map><img src="docsum_doc_p1.png" width="257" height="457" border="0" usemap="#Map029A1F70" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Method_Link029A2380"><span class="schemaName">Method</span></a><span class="schemaName"> </span><a href="#element_Taxonomy_Link029A3788"><span class="schemaName">Taxonomy</span></a><span class="schemaName"> </span><a href="#element_Strains_Link029A4B68"><span class="schemaName">Strains</span></a><span class="schemaName"> </span><a href="#element_Comment_Link029A4C88"><span class="schemaName">Comment</span></a><span class="schemaName"> </span><a href="#element_Citation_Link029A4DA8"><span class="schemaName">Citation</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_ExchangeSet_Link02982650"><span class="schemaName">ExchangeSet</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_handle_Link029A4228" /><span class="schemaSubData">handle </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_batch_Link029A43A8" /><span class="schemaSubData">batch </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_batchId_Link029A45F0" /><span class="schemaSubData">batchId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_batchType_Link029A4838" /><span class="schemaSubData">batchType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_molType_Link029A5538" /><span class="schemaSubData">molType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_sampleSize_Link029A5B20" /><span class="schemaSubData">sampleSize </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_population_Link029A5BC8" /><span class="schemaSubData">population </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_linkoutUrl_Link029A5E10" /><span class="schemaSubData">linkoutUrl </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Method_Link029A2380" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay/Method</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map029A2380"><area coords="148,128,252,199" href="#element_Exception_Link029A2FF8" /></map><img src="docsum_doc_p2.png" width="272" height="209" border="0" usemap="#Map029A2380" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Exception_Link029A2FF8"><span class="schemaName">Exception</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_name_Link029A3D88" /><span class="schemaSubData">name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Submitters method identifier</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_Id_Link029A3478" /><span class="schemaSubData">Id </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP method identifier</span></td></tr></table></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Exception_Link029A2FF8" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay/Method/Exception</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p3.png" width="124" height="81" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">description of deviation from/addition to given method<BR>
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</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Taxonomy_Link029A3788" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay/Taxonomy</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p4.png" width="232" height="124" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_id_Link029A3A78" /><span class="schemaSubData">id </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">NCBI taxonomy ID for variation</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_organism_Link029A4A88" /><span class="schemaSubData">organism </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr></table></td>
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</table>
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<br />
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<a name="element_Strains_Link029A4B68" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay/Strains</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p5.png" width="82" height="48" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">unbounded</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Comment_Link029A4C88" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay/Comment</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p6.png" width="95" height="35" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Citation_Link029A4DA8" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assay/Citation</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p7.png" width="85" height="48" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">unbounded</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Assembly_Link0299EB48" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Assembly</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map0299EB48"><area coords="226,577,312,615" href="#element_Component_Link029AA368" /><area coords="226,627,289,648" href="#element_SnpStat_Link0299E6C0" /></map><img src="docsum_doc_p8.png" width="339" height="662" border="0" usemap="#Map0299EB48" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Component_Link029AA368"><span class="schemaName">Component</span></a><span class="schemaName"> </span><a href="#element_SnpStat_Link0299E6C0"><span class="schemaName">SnpStat</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_dbSnpBuild_Link029A0988" /><span class="schemaSubData">dbSnpBuild </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP build number defining the rsid set aligned to this assembly</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_genomeBuild_Link029A17A8" /><span class="schemaSubData">genomeBuild </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">assembly build number with possible 'subbuild' version numbers to reflect updates in gene annotation (human e.g. 34_3, 35_1, 36_1)</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_groupLabel_Link029A0E68" /><span class="schemaSubData">groupLabel </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">High-level classification of the assembly to distinguish reference projects from alternate solutions. GroupLabel field from organism/build-specific ContigInfo tables. "reference" is occasionally used as the preferred assembly; standards will converge as additional organism genome projects are finished. Note that some organism assembly names include extended characters like '~' and '/' that may be incompatible with OS filename conventions.</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_assemblySource_Link029A1450" /><span class="schemaSubData">assemblySource </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Name of the group(s) or organization(s) that generated the assembly</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_current_Link029A1C80" /><span class="schemaSubData">current </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Marks the current genomic assembly</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_reference_Link029A2E80" /><span class="schemaSubData">reference </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">A collection of genome sequence records (curated gene regions (NG's), contigs (NWNT's) and chromosomes (NC/AC's) produced by a genome sequence project. Structure is populated from ContigInfo tables.</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_SnpStat_Link0299E6C0" />
|
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<span class="elementHeader">element </span>
|
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<span class="elementHeader2">Assembly/SnpStat</span>
|
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p9.png" width="251" height="511" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
|
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
|
|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_mapWeight_Link0299F0A0" /><span class="schemaSubData">mapWeight </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">summary measure of placement precision in the assembly</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_chromCount_Link0299F910" /><span class="schemaSubData">chromCount </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">number of distinct chromosomes in the mapset</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_placedContigCount_Link0299FCC8" /><span class="schemaSubData">placedContigCount </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">number of distinct contigs [ gi | accession[.version] ] in the mapset</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_unplacedContigCount_Link029A0B38" /><span class="schemaSubData">unplacedContigCount </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">number of sequence postions to a contig with unknown chromosomal assignment</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_seqlocCount_Link029A02B0" /><span class="schemaSubData">seqlocCount </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">total number of sequence positions in the mapset</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_hapCount_Link029A0658" /><span class="schemaSubData">hapCount </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Number of hits to alternative genomic haplotypes (e.g. HLA DR region, KIR, or pseudo-autosomal regions like PAR) within the assembly mapset. Note that positions on haplotypes defined in other assemblies (a different assembly_group_label value) will not be counted in this value.</span></td></tr></table></td></tr></table></td>
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<a name="element_BaseURL_Link029A60A0" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">BaseURL</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p10.png" width="280" height="192" border="0" /></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">extension of </span><span class="schemaName">xsd:string</span></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_ExchangeSet_Link02982650"><span class="schemaName">ExchangeSet</span></a></td></tr></table></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_urlId_Link029A6448" /><span class="schemaSubData">urlId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Resource identifier from dbSNP_main.baseURL.</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_resourceName_Link029A6968" /><span class="schemaSubData">resourceName </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Name of linked resource</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_resourceId_Link029A70C0" /><span class="schemaSubData">resourceId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">identifier expected by resource for URL</span></td></tr></table></td></tr></table></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">URL value from dbSNP_main.BaseURL links table. attributes provide context information and URL id that is referenced within individual refSNP objects.</span></td></tr></table></td>
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Component</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map029AA368"><area coords="171,821,289,884" href="#element_MapLoc_Link02996E80" /></map><img src="docsum_doc_p11.png" width="309" height="894" border="0" usemap="#Map029AA368" /></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_MapLoc_Link02996E80"><span class="schemaName">MapLoc</span></a></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Assembly_Link0299EB48"><span class="schemaName">Assembly</span></a></td></tr></table></td>
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_componentType_Link029AB0E8" /><span class="schemaSubData">componentType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">type of component: chromosome, contig, gene_region, etc.</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_ctgId_Link029AC070" /><span class="schemaSubData">ctgId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP contig_id used to join on contig hit / mapset data to these assembly properties</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_accession_Link029ACCA8" /><span class="schemaSubData">accession </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Accession[.version] for the sequence component</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_name_Link029AC328" /><span class="schemaSubData">name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">contig name defined as either a submitter local id, element of a whole genome assembly set, or internal NCBI local id</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_chromosome_Link029AC728" /><span class="schemaSubData">chromosome </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Organism appropriate chromosome tag, 'Un' reserved for default case of unplaced components</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_start_Link029ACAF8" /><span class="schemaSubData">start </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">component starting position on the chromosome (base 0 inclusive)</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_end_Link029ADB70" /><span class="schemaSubData">end </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">component ending position on the chromosome (base 0 inclusive)</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_orientation_Link029ADF10" /><span class="schemaSubData">orientation </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">orientation of this component to chromosome, forward (fwd) = 0, reverse (rev) = 1, unknown = NULL in ContigInfo.orient.</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_gi_Link029AD8A8" /><span class="schemaSubData">gi </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">NCBI gi for component sequence (equivalent to accession.version) for nucleotide sequence.</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_groupTerm_Link029AEA48" /><span class="schemaSubData">groupTerm </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Identifier label for the genome assembly that defines the contigs in this mapset and their placement within the organism genome. </span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_contigLabel_Link029AE1D0" /><span class="schemaSubData">contigLabel </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Display label for component</span></td></tr></table></td></tr></table></td>
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</table>
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<br />
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<a name="element_ExchangeSet_Link02982650" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">ExchangeSet</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map02982650"><area coords="199,370,309,391" href="#element_SourceDatabase_Link02982928" /><area coords="199,403,325,554" href="#element_Rs_Link02986D90" /><area coords="199,566,254,587" href="#element_Assay_Link029A1F70" /><area coords="199,599,253,620" href="#element_Query_Link029834E8" /><area coords="199,632,273,653" href="#element_Summary_Link029840C0" /><area coords="199,665,324,772" href="#element_BaseURL_Link029A60A0" /></map><img src="docsum_doc_p12.png" width="345" height="782" border="0" usemap="#Map02982650" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_SourceDatabase_Link02982928"><span class="schemaName">SourceDatabase</span></a><span class="schemaName"> </span><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a><span class="schemaName"> </span><a href="#element_Assay_Link029A1F70"><span class="schemaName">Assay</span></a><span class="schemaName"> </span><a href="#element_Query_Link029834E8"><span class="schemaName">Query</span></a><span class="schemaName"> </span><a href="#element_Summary_Link029840C0"><span class="schemaName">Summary</span></a><span class="schemaName"> </span><a href="#element_BaseURL_Link029A60A0"><span class="schemaName">BaseURL</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_setType_Link02986008" /><span class="schemaSubData">setType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">set-type: full dump; from query; single refSNP</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_setDepth_Link02986170" /><span class="schemaSubData">setDepth </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">content depth: brief XML (only refSNP properties and summary subSNP element content); full XML (full refSNP, full subSNP content; all flanking sequences)<BR>
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</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_specVersion_Link02986300" /><span class="schemaSubData">specVersion </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">version number of docsum.asn/docsum.dtd specification</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_dbSnpBuild_Link029865B8" /><span class="schemaSubData">dbSnpBuild </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">build number of database for this export</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_generated_Link02986B60" /><span class="schemaSubData">generated </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Generated date</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Set of dbSNP refSNP docsums</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_SourceDatabase_Link02982928" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">ExchangeSet/SourceDatabase</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p13.png" width="281" height="280" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_taxId_Link02956990" /><span class="schemaSubData">taxId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">NCBI taxonomy ID for variation</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_organism_Link02982C38" /><span class="schemaSubData">organism </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">common name for species used as part of database name.</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_dbSnpOrgAbbr_Link02983DF8" /><span class="schemaSubData">dbSnpOrgAbbr </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">organism abbreviation used in dbSNP. </span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_gpipeOrgAbbr_Link02982F50" /><span class="schemaSubData">gpipeOrgAbbr </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">organism abbreviation used within NCBI genome pipeline data dumps.</span></td></tr></table></td></tr></table></td>
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</table>
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<br />
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<a name="element_Query_Link029834E8" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">ExchangeSet/Query</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p14.png" width="205" height="137" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_date_Link02983920" /><span class="schemaSubData">date </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">yyyy-mm-dd</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_string_Link029848A8" /><span class="schemaSubData">string </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Query terms or search constraints</span></td></tr></table></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Summary_Link029840C0" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">ExchangeSet/Summary</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p15.png" width="248" height="555" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numRsIds_Link02984340" /><span class="schemaSubData">numRsIds </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of refsnp-ids in this exchange set<BR>
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</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_totalSeqLength_Link02984770" /><span class="schemaSubData">totalSeqLength </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total length of exemplar flanking sequences</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numContigHits_Link02984CC0" /><span class="schemaSubData">numContigHits </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of contig locations from SNPContigLoc</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numGeneHits_Link02984F48" /><span class="schemaSubData">numGeneHits </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of locus ids from SNPContigLocusId</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numGiHits_Link02985AC0" /><span class="schemaSubData">numGiHits </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of gi hits from MapLink</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_num3dStructs_Link02985DD8" /><span class="schemaSubData">num3dStructs </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of 3D structures from SNP3D</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numAlleleFreqs_Link029868D8" /><span class="schemaSubData">numAlleleFreqs </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of allele frequences from SubPopAllele</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numStsHits_Link029852C0" /><span class="schemaSubData">numStsHits </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of STS hits from SnpInSts</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numUnigeneCids_Link029855D8" /><span class="schemaSubData">numUnigeneCids </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Total number of unigene cluster ids from UnigeneSnp</span></td></tr></table></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_FxnSet_Link0299B008" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">FxnSet</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p16.png" width="300" height="598" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_MapLoc_Link02996E80"><span class="schemaName">MapLoc</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_geneId_Link0299BDF8" /><span class="schemaSubData">geneId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">gene-id of gene as aligned to contig</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_symbol_Link0299B428" /><span class="schemaSubData">symbol </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">symbol (official if present in Entrez Gene) of gene</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_mrnaAcc_Link0299B7C0" /><span class="schemaSubData">mrnaAcc </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">mRNA accession if variation in transcript</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_mrnaVer_Link0299C8E8" /><span class="schemaSubData">mrnaVer </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">mRNA sequence version if variation is in transcripot</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_protAcc_Link0299C090" /><span class="schemaSubData">protAcc </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">protein accession if variation in protein</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_protVer_Link0299C400" /><span class="schemaSubData">protVer </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">protein version if variation is in protein</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_fxnClass_Link0299C780" /><span class="schemaSubData">fxnClass </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_readingFrame_Link0299D278" /><span class="schemaSubData">readingFrame </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_allele_Link0299D390" /><span class="schemaSubData">allele </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">variation allele: * suffix indicates allele of contig at this location</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_residue_Link0299D748" /><span class="schemaSubData">residue </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">translated amino acid residue for allele</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_aaPosition_Link0299E008" /><span class="schemaSubData">aaPosition </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">position of the variant residue in peptide sequence</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">functional relationship of SNP (and possibly alleles) to genes at contig location as defined in organism-specific bxxx_SNPContigLocusId_xxx tables.</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_MapLoc_Link02996E80" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">MapLoc</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map02996E80"><area coords="203,744,328,851" href="#element_FxnSet_Link0299B008" /></map><img src="docsum_doc_p17.png" width="348" height="861" border="0" usemap="#Map02996E80" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_FxnSet_Link0299B008"><span class="schemaName">FxnSet</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">elements </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Component_Link029AA368"><span class="schemaName">Component</span></a><span class="schemaName"> </span><a href="#element_PrimarySequence_Link029A7C88"><span class="schemaName">PrimarySequence</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_asnFrom_Link02997478" /><span class="schemaSubData">asnFrom </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">beginning of variation as feature on contig</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_asnTo_Link02997A00" /><span class="schemaSubData">asnTo </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">end position of variation as feature on contig</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_locType_Link02997D98" /><span class="schemaSubData">locType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">defines the seq-loc symbol if asn_from != asn_to</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_alnQuality_Link029985C0" /><span class="schemaSubData">alnQuality </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:double</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">alignment qualiity</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_orient_Link02998770" /><span class="schemaSubData">orient </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">orientation of refSNP sequence to contig sequence</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_physMapInt_Link02999C38" /><span class="schemaSubData">physMapInt </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">chromosome position as integer for sorting</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_leftFlankNeighborPos_Link029990E0" /><span class="schemaSubData">leftFlankNeighborPos </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">nearest aligned position in 5' flanking sequence of snp</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_rightFlankNeighborPos_Link029993E8" /><span class="schemaSubData">rightFlankNeighborPos </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">nearest aligned position in 3' flanking sequence of snp </span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_leftContigNeighborPos_Link02999788" /><span class="schemaSubData">leftContigNeighborPos </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">nearest aligned position in 5' contig alignment of snp</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_rightContigNeighborPos_Link0299AA58" /><span class="schemaSubData">rightContigNeighborPos </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">nearest aligned position in 3' contig alignment of snp</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numberOfMismatches_Link0299AE08" /><span class="schemaSubData">numberOfMismatches </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">number of Mismatched positions in this alignment</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numberOfDeletions_Link0299A2C8" /><span class="schemaSubData">numberOfDeletions </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">number of deletions in this alignment</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_numberOfInsertions_Link0299A638" /><span class="schemaSubData">numberOfInsertions </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">number of insetions in this alignment</span></td></tr></table></td></tr></table></td>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Position of a single hit of a variation on a contig</span></td></tr></table></td>
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</table>
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<br />
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<a name="element_PrimarySequence_Link029A7C88" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">PrimarySequence</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map029A7C88"><area coords="204,152,322,215" href="#element_MapLoc_Link02996E80" /></map><img src="docsum_doc_p18.png" width="342" height="225" border="0" usemap="#Map029A7C88" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_MapLoc_Link02996E80"><span class="schemaName">MapLoc</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_dbSnpBuild_Link029A7550" /><span class="schemaSubData">dbSnpBuild </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_gi_Link029A7630" /><span class="schemaSubData">gi </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_source_Link029A78A0" /><span class="schemaSubData">source </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_accession_Link029A83E0" /><span class="schemaSubData">accession </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr></table></td>
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</table>
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<br />
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<a name="element_Rs_Link02986D90" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map02986D90"><area coords="226,352,278,373" href="#element_Het_Link02987100" /><area coords="226,385,301,406" href="#element_Validation_Link02988490" /><area coords="226,418,346,467" href="#element_Create_Link0298A850" /><area coords="226,479,349,539" href="#element_Update_Link0298ABE0" /><area coords="226,551,302,572" href="#element_Sequence_Link0298C858" /><area coords="226,584,322,647" href="#element_Ss_Link02990700" /><area coords="226,659,352,788" href="#element_Assembly_Link0299EB48" /><area coords="226,800,345,838" href="#element_PrimarySequence_Link029A7C88" /><area coords="226,850,352,902" href="#element_RsStruct_Link029A8488" /><area coords="226,914,352,966" href="#element_RsLinkout_Link029A9DE0" /><area coords="226,978,322,1016" href="#element_MergeHistory_Link0298D4F8" /></map><img src="docsum_doc_p19.png" width="372" height="1026" border="0" usemap="#Map02986D90" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Het_Link02987100"><span class="schemaName">Het</span></a><span class="schemaName"> </span><a href="#element_Validation_Link02988490"><span class="schemaName">Validation</span></a><span class="schemaName"> </span><a href="#element_Create_Link0298A850"><span class="schemaName">Create</span></a><span class="schemaName"> </span><a href="#element_Update_Link0298ABE0"><span class="schemaName">Update</span></a><span class="schemaName"> </span><a href="#element_Sequence_Link0298C858"><span class="schemaName">Sequence</span></a><span class="schemaName"> </span><a href="#element_Ss_Link02990700"><span class="schemaName">Ss</span></a><span class="schemaName"> </span><a href="#element_Assembly_Link0299EB48"><span class="schemaName">Assembly</span></a><span class="schemaName"> </span><a href="#element_PrimarySequence_Link029A7C88"><span class="schemaName">PrimarySequence</span></a><span class="schemaName"> </span><a href="#element_RsStruct_Link029A8488"><span class="schemaName">RsStruct</span></a><span class="schemaName"> </span><a href="#element_RsLinkout_Link029A9DE0"><span class="schemaName">RsLinkout</span></a><span class="schemaName"> </span><a href="#element_MergeHistory_Link0298D4F8"><span class="schemaName">MergeHistory</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_ExchangeSet_Link02982650"><span class="schemaName">ExchangeSet</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_rsId_Link0298F948" /><span class="schemaSubData">rsId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">refSNP (rs) number</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_snpClass_Link0298FAA8" /><span class="schemaSubData">snpClass </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_snpType_Link0298E320" /><span class="schemaSubData">snpType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_molType_Link0298F1B0" /><span class="schemaSubData">molType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_validProbMin_Link02990058" /><span class="schemaSubData">validProbMin </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">minimum reported success rate of all submissions in cluster</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_validProbMax_Link02990CA8" /><span class="schemaSubData">validProbMax </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:integer</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">maximum reported success rate of all submissions in cluster</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_genotype_Link02990398" /><span class="schemaSubData">genotype </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">optional </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">at least one genotype reported for this refSNP</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">defines the docsum structure for refSNP clusters, where a refSNP cluster (rs) is a grouping of individual dbSNP submissions that all refer to the same variation. The refsnp provides a single unified record for annotation of NCBI resources such as reference genome sequence.</span></td></tr></table></td>
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</table>
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<br />
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<a name="element_Het_Link02987100" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Het</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p20.png" width="224" height="214" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_type_Link029878D0" /><span class="schemaSubData">type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Est=Estimated average het from allele frequencies, Obs=Observed from genotype data</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_value_Link02987F20" /><span class="schemaSubData">value </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:float</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Heterozygosity</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_stdError_Link02988208" /><span class="schemaSubData">stdError </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:float</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Standard error of Het estimate</span></td></tr></table></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Validation_Link02988490" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Validation</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map02988490"><area coords="175,331,292,394" href="#element_otherPopBatchId_Link029888C8" /><area coords="175,406,303,491" href="#element_twoHit2AlleleBatchId_Link02988DB0" /></map><img src="docsum_doc_p21.png" width="330" height="501" border="0" usemap="#Map02988490" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_otherPopBatchId_Link029888C8"><span class="schemaName">otherPopBatchId</span></a><span class="schemaName"> </span><a href="#element_twoHit2AlleleBatchId_Link02988DB0"><span class="schemaName">twoHit2AlleleBatchId</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_byCluster_Link02989130" /><span class="schemaSubData">byCluster </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">at least one subsnp in cluster has frequency data submitted</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_byFrequency_Link029892C0" /><span class="schemaSubData">byFrequency </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">cluster has 2+ submissions, with 1+ submissions assayed with a non-computational method</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_byOtherPop_Link029896B0" /><span class="schemaSubData">byOtherPop </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_by2Hit2Allele_Link02989758" /><span class="schemaSubData">by2Hit2Allele </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">cluster has 2+ submissions, with 1+ submissions assayed with a non-computational method</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_byHapMap_Link02989C48" /><span class="schemaSubData">byHapMap </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">TBD</span></td></tr></table></td></tr></table></td>
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</table>
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<br />
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<a name="element_otherPopBatchId_Link029888C8" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Validation/otherPopBatchId</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p22.png" width="137" height="73" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">unbounded</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP batch-id's for other pop snp validation data.</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_twoHit2AlleleBatchId_Link02988DB0" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Validation/twoHit2AlleleBatchId</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p23.png" width="155" height="95" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">unbounded</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP batch-id's for double-hit snp validation data. Use batch-id to get methods, etc.</span></td></tr></table></td>
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</table>
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<br />
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<a name="element_Create_Link0298A850" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Create</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p24.png" width="273" height="137" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_build_Link0298A248" /><span class="schemaSubData">build </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">build number when the cluster was created</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_date_Link0298A708" /><span class="schemaSubData">date </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">yyyy-mm-dd</span></td></tr></table></td></tr></table></td>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">date the refsnp cluster was instantiated</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Update_Link0298ABE0" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Update</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p25.png" width="276" height="137" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_build_Link0298BF40" /><span class="schemaSubData">build </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">build number when the cluster was updated</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_date_Link0298B180" /><span class="schemaSubData">date </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">yyyy-mm-dd</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">most recent date the cluster was updated (member added or deleted)</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Sequence_Link0298C858" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Sequence</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map0298C858"><area coords="176,117,295,166" href="#element_Seq5_Link0298CC30" /><area coords="176,178,302,271" href="#element_Observed_Link0298B6A8" /><area coords="176,283,295,332" href="#element_Seq3_Link0298BB40" /></map><img src="docsum_doc_p26.png" width="322" height="342" border="0" usemap="#Map0298C858" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Seq5_Link0298CC30"><span class="schemaName">Seq5</span></a><span class="schemaName"> </span><a href="#element_Observed_Link0298B6A8"><span class="schemaName">Observed</span></a><span class="schemaName"> </span><a href="#element_Seq3_Link0298BB40"><span class="schemaName">Seq3</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_exemplarSs_Link0298C238" /><span class="schemaSubData">exemplarSs </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP ss# selected as source of refSNP flanking sequence, ss# part of ss-list below </span></td></tr></table></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Seq5_Link0298CC30" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/Sequence/Seq5</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p27.png" width="139" height="59" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">5' sequence that flanks the variation</span></td></tr></table></td>
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</tr>
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</table>
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<br />
|
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<a name="element_Observed_Link0298B6A8" />
|
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<span class="elementHeader">element </span>
|
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<span class="elementHeader2">Rs/Sequence/Observed</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p28.png" width="146" height="103" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
|
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">list of all nucleotide alleles observed in ss-list members, correcting for reverse complementation of memebers reported in reverse orientation</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Seq3_Link0298BB40" />
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<span class="elementHeader">element </span>
|
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<span class="elementHeader2">Rs/Sequence/Seq3</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p29.png" width="139" height="59" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
|
|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">3' sequence that flanks the variation</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_MergeHistory_Link0298D4F8" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Rs/MergeHistory</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p30.png" width="270" height="225" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">unbounded</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_rsId_Link0298DBB8" /><span class="schemaSubData">rsId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">previously issued rs id whose member assays have now been merged</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_buildId_Link0298EA10" /><span class="schemaSubData">buildId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">build id when rs id was merged into parent rs</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_orientFlip_Link0298ED98" /><span class="schemaSubData">orientFlip </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:boolean</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">TRUE if strand of rs id is reverse to parent object's current strand</span></td></tr></table></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_RsLinkout_Link029A9DE0" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">RsLinkout</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p31.png" width="287" height="148" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_resourceId_Link029ABA88" /><span class="schemaSubData">resourceId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">BaseURLList.url_id</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_linkValue_Link029ABF00" /><span class="schemaSubData">linkValue </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">value to append to ResourceURL.base-url for complete link</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">link data for another resource</span></td></tr></table></td>
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</tr>
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</table>
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<br />
|
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<a name="element_RsStruct_Link029A8488" />
|
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<span class="elementHeader">element </span>
|
|
<span class="elementHeader2">RsStruct</span>
|
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
|
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
|
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p32.png" width="301" height="467" border="0" /></td>
|
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</tr>
|
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<tr valign="top">
|
|
<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
|
|
<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
|
|
</tr>
|
|
<tr valign="top">
|
|
<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
|
|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
|
|
</tr>
|
|
<tr valign="top">
|
|
<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
|
|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a></td></tr></table></td>
|
|
</tr>
|
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<tr valign="top">
|
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
|
|
<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_protAcc_Link029A8960" /><span class="schemaSubData">protAcc </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">accession of the protein with variation</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_protGi_Link029A8DC0" /><span class="schemaSubData">protGi </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">GI of the protein with variation</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_protLoc_Link029A9F50" /><span class="schemaSubData">protLoc </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">position of the residue for the protein GI</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_protResidue_Link029A9398" /><span class="schemaSubData">protResidue </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">residue specified for protein at prot-loc location</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_rsResidue_Link029AA8E8" /><span class="schemaSubData">rsResidue </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">alternative residue specified by variation sequence</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_structGi_Link029AAC68" /><span class="schemaSubData">structGi </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">GI of the structure neighbor</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_structLoc_Link029A9718" /><span class="schemaSubData">structLoc </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">position of the residue for the structure GI</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_structResidue_Link029A9A50" /><span class="schemaSubData">structResidue </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">residue specified for protein at struct-loc location</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">structure information for SNP</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Ss_Link02990700" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Ss</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map02990700"><area coords="181,705,257,726" href="#element_Sequence_Link02990B38" /></map><img src="docsum_doc_p33.png" width="285" height="740" border="0" usemap="#Map02990700" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Sequence_Link02990B38"><span class="schemaName">Sequence</span></a></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">used by</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">element </span></td><td align="left" bgcolor="#F0F0F0"><a href="#element_Rs_Link02986D90"><span class="schemaName">Rs</span></a></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">attributes</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Name </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Type </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Use </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Default </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Fixed </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">Annotation</span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_ssId_Link02992698" /><span class="schemaSubData">ssId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP accession number for submission</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_handle_Link029927F8" /><span class="schemaSubData">handle </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">Tag for the submitting laboratory</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_batchId_Link02993978" /><span class="schemaSubData">batchId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">required </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP number for batch submission</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_locSnpId_Link02993BE0" /><span class="schemaSubData">locSnpId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">submission (ss#)<BR>
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submitter ID</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_subSnpClass_Link02993F00" /><span class="schemaSubData">subSnpClass </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">SubSNP classification by type of variation</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_orient_Link029932E0" /><span class="schemaSubData">orient </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">orientation of refsnp cluster members to refsnp cluster sequence</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_strand_Link02994290" /><span class="schemaSubData">strand </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">strand is defined as TOP/BOTTOM by nature of flanking nucleotide sequence</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_molType_Link029946E8" /><span class="schemaSubData">molType </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">moltype from Batch table</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_buildId_Link02995040" /><span class="schemaSubData">buildId </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:int</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">dbSNP build number when ss# was added to a refSNP (rs#) cluster</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_methodClass_Link02995C38" /><span class="schemaSubData">methodClass </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">class of method used to assay for the variation</span></td></tr></table></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_validated_Link029960B0" /><span class="schemaSubData">validated </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">derived by: </span><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td></tr><tr valign="top"><td width="16%" align="left" bgcolor="#F0F0F0"><a name="attribute_linkoutUrl_Link02996D20" /><span class="schemaSubData">linkoutUrl </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData"> </span></td><td width="16%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">append loc-snp-id to this base URL to construct a pointer to submitter data.</span></td></tr></table></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">data for an individual submission to dbSNP</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Sequence_Link02990B38" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Ss/Sequence</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><map name="Map02990B38"><area coords="161,0,280,49" href="#element_Seq5_Link02991878" /><area coords="161,61,287,154" href="#element_Observed_Link02991DD8" /><area coords="161,166,280,215" href="#element_Seq3_Link02992270" /></map><img src="docsum_doc_p34.png" width="307" height="225" border="0" usemap="#Map02990B38" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">complex</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">children</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><a href="#element_Seq5_Link02991878"><span class="schemaName">Seq5</span></a><span class="schemaName"> </span><a href="#element_Observed_Link02991DD8"><span class="schemaName">Observed</span></a><span class="schemaName"> </span><a href="#element_Seq3_Link02992270"><span class="schemaName">Seq3</span></a></td>
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</tr>
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</table>
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<br />
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<a name="element_Seq5_Link02991878" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Ss/Sequence/Seq5</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p35.png" width="139" height="59" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">5' sequence that flanks the variation</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Observed_Link02991DD8" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Ss/Sequence/Observed</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p36.png" width="146" height="103" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">list of all nucleotide alleles observed in ss-list members, correcting for reverse complementation of memebers reported in reverse orientation</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<a name="element_Seq3_Link02992270" />
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<span class="elementHeader">element </span>
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<span class="elementHeader2">Ss/Sequence/Seq3</span>
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<table width="100%" cellspacing="0" cellpadding="5" border="1">
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">diagram</span></td>
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<td width="90%" align="left" bgcolor="#FFFFFF"><img src="docsum_doc_p37.png" width="139" height="59" border="0" /></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">namespace</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaSubData">http://www.ncbi.nlm.nih.gov/SNP/docsum</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">type</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><span class="schemaName">xsd:string</span></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">properties</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">isRef </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">minOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">0</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">maxOcc </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">1</span></td></tr><tr valign="top"><td align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">content </span></td><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">simple</span></td></tr></table></td>
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</tr>
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<tr valign="top">
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<td width="10%" align="right" bgcolor="#F0F0F0"><span class="schemaSubTitle">annotation</span></td>
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<td width="90%" align="left" bgcolor="#F0F0F0"><table cellspacing="0" cellpadding="0"><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubTitle">documentation</span></td></tr><tr valign="top"><td align="left" bgcolor="#F0F0F0"><span class="schemaSubData">3' sequence that flanks the variation</span></td></tr></table></td>
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</tr>
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</table>
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<br />
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<br />
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<span class="schemaSubTitle">XML Schema documentation generated by </span>
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<a href="http://www.altova.com/xmlspy">
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<span class="schemaName">XMLSpy</span>
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</a>
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<span class="schemaSubTitle"> Schema Editor </span>
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<a href="http://www.altova.com/xmlspy">
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<span class="schemaName">http://www.altova.com/xmlspy</span>
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</a>
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</body>
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</html>
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