301 lines
15 KiB
XML
301 lines
15 KiB
XML
<?xml version="1.0" encoding="UTF-8"?>
|
|
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
|
|
<head>
|
|
<title>GEO Browser - GEO - NCBI</title>
|
|
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
|
|
<meta name="author" content="geo" />
|
|
<meta name="keywords" content="NCBI, national institutes of health, nih, database, archive, central, bioinformatics, biomedicine, geo, gene, expression, omnibus, chips, microarrays, oligonucleotide, array, sage, CGH" />
|
|
<meta name="description" content="Gene Expression Omnibus (GEO) is a database repository of high throughput gene expression data and hybridization arrays, chips, microarrays." />
|
|
<meta name="ncbidialog" content="width: 330, modal: true" />
|
|
<meta name="ncbi_app" content="geo" />
|
|
<meta name="ncbi_pdid" content="browse" />
|
|
<meta name="ncbi_phid" content="0C42F6D27D29D5C10000000000000001" />
|
|
<meta name="ncbi_sessionid" content="CE8B5AF87C7FFCB1_0191SID" />
|
|
<link rel="shortcut icon" href="/geo/img/OmixIconBare.ico" />
|
|
<link rel="stylesheet" type="text/css" href="/geo/css/reset.css" />
|
|
<link rel="stylesheet" type="text/css" href="/geo/css/geo.css" />
|
|
<link rel="stylesheet" type="text/css" href="browse.css" />
|
|
<script type="text/javascript" src="/core/jig/1.15.10/js/jig.min.js"></script>
|
|
<script type="text/javascript" src="/geo/js/dd_menu.js"></script>
|
|
<script type="text/javascript">
|
|
jQuery.getScript("/core/alerts/alerts.js", function () {
|
|
galert(['#crumbs_login_bar', 'body > *:nth-child(1)'])
|
|
});
|
|
</script>
|
|
<script type="text/javascript">
|
|
var ncbi_startTime = new Date();
|
|
</script>
|
|
</head>
|
|
<body id="series" class="browse">
|
|
<div id="all">
|
|
<div id="page">
|
|
<div id="header">
|
|
<div id="ncbi_logo">
|
|
<a href="/">
|
|
<img src="/geo/img/ncbi_logo.gif" alt="NCBI Logo" />
|
|
</a>
|
|
</div>
|
|
<div id="geo_logo">
|
|
<a href="/geo/"><img src="/geo/img/geo_main.gif" alt="GEO Logo" /></a>
|
|
</div>
|
|
</div>
|
|
<div id="nav_bar">
|
|
<ul id="geo_nav_bar">
|
|
<li><a href="#">GEO Publications</a>
|
|
<ul class="sublist">
|
|
<li><a href="/geo/info/GEOHandoutFinal.pdf">Handout</a></li>
|
|
<li><a href="/pmc/articles/PMC10767856/">NAR 2024 (latest)</a></li>
|
|
<li><a href="/pmc/articles/PMC99122/">NAR 2002 (original)</a></li>
|
|
<li><a href="/pmc/?term=10767856,4944384,3531084,3341798,3013736,2686538,2270403,1669752,1619900,1619899,539976,99122">All publications</a></li>
|
|
</ul>
|
|
</li>
|
|
<li><a href="/geo/info/faq.html">FAQ</a></li>
|
|
<li><a href="/geo/info/MIAME.html" title="Minimum Information About a Microarray Experiment">MIAME</a></li>
|
|
<li><a href="mailto:geo@ncbi.nlm.nih.gov">Email GEO</a></li>
|
|
</ul>
|
|
</div>
|
|
<div id="crumbs_login_bar"><a title="NCBI home page" href="/">NCBI</a> »
|
|
<a id="curr_page" title="GEO home page" href="/geo/">GEO</a> »
|
|
<a title="GEO Repository browser" href="/geo/browse/">Repository browser</a> »
|
|
<span id="view"><a href="/geo/browse/?view=series">Series</a></span><span id="login_status"><a href="/geo/submitter" title="Click here to login. You need to do this only if you want to edit the contact information, submit data, see your unreleased data, or work with data already submitted by you. You do not need to login if you are here just to browse through public holdings">Login</a></span></div>
|
|
<div id="content">
|
|
<div id="view_nav">
|
|
<div class="tab" id="active_tab">
|
|
<a href="/geo/browse/?view=series">Series</a>
|
|
</div>
|
|
<div class="tab">
|
|
<a href="/geo/browse/?view=samples&display=20">Samples</a>
|
|
</div>
|
|
<div class="tab">
|
|
<a href="/geo/browse/?view=platforms&display=20">Platforms</a>
|
|
</div>
|
|
<div class="tab">
|
|
<a href="/sites/GDSbrowser">DataSets</a>
|
|
</div>
|
|
</div>
|
|
<div id="top_links"><a href="/geo/summary/">Summary</a> |
|
|
<a href="/gds/advanced">Advanced search</a></div>
|
|
<ul id="data" style="display: none;">
|
|
<li id="filters">&platform=33913</li>
|
|
<li id="sort">&zsort=date</li>
|
|
<li id="search_term"></li>
|
|
<li id="search_str"></li>
|
|
<li id="total_count">2</li>
|
|
<li id="export_count">5000</li>
|
|
<li id="page_size">20</li>
|
|
<li id="page_count">1</li>
|
|
</ul>
|
|
<div id="tools">
|
|
<div id="search_form" class="">
|
|
<form action="." method="post">
|
|
<input type="hidden" name="view" value="series" />
|
|
<input class="searchTxt " type="text" name="search" value="" />
|
|
<input type="hidden" name="platform" value="33913" />
|
|
<input type="hidden" name="display" value="20" />
|
|
<input class="button" type="submit" value="Search" />
|
|
</form>
|
|
</div>
|
|
<div id="count" class="commas">2 series</div>
|
|
<div id="export" class="export">
|
|
<a class="button jig-ncbidialog" href="#export_options">Export</a>
|
|
<div id="export_options" class="ui-ncbidialog-dest export" title="Export options" style="display: none;">
|
|
<fieldset class="amount">
|
|
<label>Amount</label>
|
|
<ul>
|
|
<li>
|
|
<input name="amount" id="this_page" value="this_page" type="radio" checked="checked" />
|
|
<label for="this_page">This page</label>
|
|
</li>
|
|
<li>
|
|
<input name="amount" id="all_results" value="all_results" type="radio" />
|
|
<label for="all_results">All search results</label>
|
|
</li>
|
|
</ul>
|
|
</fieldset>
|
|
<fieldset class="format">
|
|
<label>Format</label>
|
|
<ul>
|
|
<li>
|
|
<input name="format" id="csv" value="csv" type="radio" checked="checked" />
|
|
<label for="csv">CSV</label>
|
|
</li>
|
|
<li>
|
|
<input name="format" id="tsv" value="tsv" type="radio" />
|
|
<label for="tsv">Tab</label>
|
|
</li>
|
|
</ul>
|
|
</fieldset>
|
|
<a id="exp_btn" class="button" title="Download text file" href="?view=series&platform=33913&zsort=date">Export</a>
|
|
</div>
|
|
</div>
|
|
<div class="pager"><span class="first inactive"><<</span><span class="previous inactive"><</span><span>Page </span><input class="page_num" disabled="disabled" size="2" value="1" /> of 1
|
|
<span class="next inactive">></span><span class="last inactive">>></span><span>Page size </span><select disabled="disabled" size="1"><option value="10">10</option></select></div>
|
|
</div>
|
|
<script type="text/javascript" src="browse.js"></script>
|
|
<table id="geo_data">
|
|
<thead>
|
|
<tr>
|
|
<th class="sort acc">
|
|
<a href="?view=series&platform=33913&display=20&sort=acc" title="sort">Accession</a>
|
|
</th>
|
|
<th class="sort title">
|
|
<a href="?view=series&platform=33913&display=20&sort=title" title="sort">Title</a>
|
|
</th>
|
|
<th class="sort setype">
|
|
<a href="?view=series&platform=33913&display=20&sort=type" title="sort">Series type(s)</a>
|
|
</th>
|
|
<th class="sort species">
|
|
<a href="?view=series&platform=33913&display=20&sort=tax" title="sort">Organism(s)</a>
|
|
</th>
|
|
<th class="sort samples">
|
|
<a href="?view=series&platform=33913&display=20&sort=samples" title="sort">Samples</a>
|
|
</th>
|
|
<th class="sort gds">
|
|
<a href="?view=series&platform=33913&display=20&sort=gds" title="sort ">GDS</a>
|
|
</th>
|
|
<th class="sort suppl">
|
|
<a href="?view=series&platform=33913&display=20&sort=suppl" title="sort">Supplementary</a>
|
|
</th>
|
|
<th class="sort contact">
|
|
<a href="?view=series&platform=33913&display=20&sort=submitter" title="sort">Contact</a>
|
|
</th>
|
|
<th class="sortdesc date">
|
|
<a href="?view=series&platform=33913&display=20&sort=date" title="sort">Release date</a>
|
|
</th>
|
|
</tr>
|
|
</thead>
|
|
<tbody>
|
|
<tr id="filter_info">
|
|
<td>
|
|
<a href="?view=series&zsort=date&display=20"><img src="/geo/img/close_icon.gif" alt="Remove filters" />Filter
|
|
</a>
|
|
</td>
|
|
<td>
|
|
<a href="?view=series&zsort=date&display=20"><img src="/geo/img/close_icon.gif" alt="Remove filter" /><b>Platform: </b>GPL33913</a>
|
|
</td>
|
|
<td></td>
|
|
<td class="species"></td>
|
|
<td></td>
|
|
<td></td>
|
|
<td></td>
|
|
<td></td>
|
|
<td></td>
|
|
</tr>
|
|
<tr>
|
|
<td>
|
|
<a href="/geo/query/acc.cgi?acc=GSE262358">GSE262358</a>
|
|
</td>
|
|
<td class="title">
|
|
<div>The transcriptomic landscape of multiple organs in CHIKV-infected Rhesus monkeys and mice</div>
|
|
</td>
|
|
<td>
|
|
<ul class="bullet setype">
|
|
<li>
|
|
<a href="?view=series&type=26&platform=33913&zsort=date&display=20">Non-coding RNA profiling by high throughput sequencing</a>
|
|
</li>
|
|
<li>
|
|
<a href="?view=series&type=3&platform=33913&zsort=date&display=20">Expression profiling by high throughput sequencing</a>
|
|
</li>
|
|
</ul>
|
|
</td>
|
|
<td class="species">
|
|
<ul>
|
|
<li>
|
|
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9544">
|
|
<img src="/geo/img/link.png" alt="Link icon" />
|
|
</a>
|
|
<a class="sp" href="?view=series&tax=9544&platform=33913&zsort=date&display=20">Macaca mulatta</a>
|
|
</li>
|
|
<li>
|
|
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=10090">
|
|
<img src="/geo/img/link.png" alt="Link icon" />
|
|
</a>
|
|
<a class="sp" href="?view=series&tax=10090&platform=33913&zsort=date&display=20">Mus musculus</a>
|
|
</li>
|
|
</ul>
|
|
</td>
|
|
<td class="right">
|
|
<a class="commas" href="/geo/browse/?view=samples&series=262358">72</a>
|
|
</td>
|
|
<td class="center"></td>
|
|
<td class="suppl">
|
|
<ul>
|
|
<li>
|
|
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE262nnn/GSE262358/suppl">
|
|
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
|
</a>
|
|
<span><a href="?view=series&platform=33913&suppl=XLS&zsort=date&display=20">XLS</a> </span>
|
|
</li>
|
|
</ul>
|
|
</td>
|
|
<td class="contact">
|
|
<a class="cont" href="?view=series&platform=33913&submitter=116640&zsort=date&display=20">Lin dongdong</a>
|
|
</td>
|
|
<td class="date">
|
|
<a href="?view=series&platform=33913&date=01Jun2024&zsort=date&display=20">Jun 01, 2024</a>
|
|
</td>
|
|
</tr>
|
|
<tr>
|
|
<td>
|
|
<a href="/geo/query/acc.cgi?acc=GSE246985">GSE246985</a>
|
|
</td>
|
|
<td class="title">
|
|
<div>The transcriptomic landscape of PBMC in SARS-CoV-2 variants-infected Rhesus monkeys via digital RNA-seq analysis</div>
|
|
</td>
|
|
<td>
|
|
<ul class="bullet setype">
|
|
<li>
|
|
<a href="?view=series&type=3&platform=33913&zsort=date&display=20">Expression profiling by high throughput sequencing</a>
|
|
</li>
|
|
</ul>
|
|
</td>
|
|
<td class="species">
|
|
<ul>
|
|
<li>
|
|
<a class="link_icon" href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9544">
|
|
<img src="/geo/img/link.png" alt="Link icon" />
|
|
</a>
|
|
<a class="sp" href="?view=series&tax=9544&platform=33913&zsort=date&display=20">Macaca mulatta</a>
|
|
</li>
|
|
</ul>
|
|
</td>
|
|
<td class="right">
|
|
<a class="commas" href="/geo/browse/?view=samples&series=246985">20</a>
|
|
</td>
|
|
<td class="center"></td>
|
|
<td class="suppl">
|
|
<ul>
|
|
<li>
|
|
<a class="link_icon" href="ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE246nnn/GSE246985/suppl">
|
|
<img src="/geo/img/arrow_down_blue.png" alt="Download icon" />
|
|
</a>
|
|
<span><a href="?view=series&platform=33913&suppl=TXT&zsort=date&display=20">TXT</a> </span>
|
|
</li>
|
|
</ul>
|
|
</td>
|
|
<td class="contact">
|
|
<a class="cont" href="?view=series&platform=33913&submitter=116640&zsort=date&display=20">Lin dongdong</a>
|
|
</td>
|
|
<td class="date">
|
|
<a href="?view=series&platform=33913&date=01Dec2023&zsort=date&display=20">Dec 01, 2023</a>
|
|
</td>
|
|
</tr>
|
|
</tbody>
|
|
</table>
|
|
</div>
|
|
</div>
|
|
<div id="footer">
|
|
<span class="helpbar">|<a href="https://www.nlm.nih.gov"> NLM </a>|<a href="https://www.nih.gov"> NIH </a>|<a href="mailto:geo@ncbi.nlm.nih.gov"> Email GEO </a>|<a href="/geo/info/disclaimer.html"> Disclaimer </a>|<a href="https://www.nlm.nih.gov/accessibility.html"> Accessibility </a>|<a href="https://www.hhs.gov/vulnerability-disclosure-policy/index.html"> HHS Vulnerability Disclosure </a>|
|
|
</span>
|
|
</div>
|
|
</div>
|
|
<script type="text/javascript">
|
|
update_header_titles();
|
|
format_numbers();
|
|
add_titles();
|
|
</script>
|
|
<script type="text/javascript" src="/portal/portal3rc.fcgi/rlib/js/InstrumentNCBIBaseJS/InstrumentPageStarterJS.js"></script>
|
|
</body>
|
|
</html>
|
|
|