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3217 lines
No EOL
259 KiB
XML
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<h1 class="res_name"><a href="/gene/">Gene</a></h1>
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<h2 class="res_tagline">Genes and mapped phenotypes</h2>
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<div class="search"><div class="search_form"><label for="database" class="offscreen_noflow">Search database</label><select id="database"><optgroup label="Recent"><option value="pubmed">PubMed</option><option value="clinvar">ClinVar</option><option value="medgen">MedGen</option><option value="books" class="last">Books</option></optgroup><optgroup label="All"><option value="gquery">All Databases</option><option value="assembly" data-ac_dict="assembly">Assembly</option><option value="biocollections">Biocollections</option><option value="bioproject">BioProject</option><option value="biosample">BioSample</option><option value="books">Books</option><option value="clinvar">ClinVar</option><option value="cdd">Conserved Domains</option><option value="gap">dbGaP</option><option value="dbvar">dbVar</option><option value="gene" selected="selected" data-ac_dict="gene">Gene</option><option value="genome" data-ac_dict="genome">Genome</option><option value="gds">GEO DataSets</option><option value="geoprofiles">GEO Profiles</option><option value="gtr">GTR</option><option value="ipg">Identical Protein Groups</option><option value="medgen">MedGen</option><option value="mesh">MeSH</option><option value="nlmcatalog">NLM Catalog</option><option value="nuccore" data-ac_dict="nuccore">Nucleotide</option><option value="omim">OMIM</option><option value="pmc">PMC</option><option value="protein" data-ac_dict="protein">Protein</option><option value="proteinclusters">Protein Clusters</option><option value="protfam">Protein Family Models</option><option value="pcassay">PubChem BioAssay</option><option value="pccompound">PubChem Compound</option><option value="pcsubstance">PubChem Substance</option><option value="pubmed">PubMed</option><option value="snp">SNP</option><option value="sra">SRA</option><option value="structure">Structure</option><option value="taxonomy">Taxonomy</option><option value="toolkit">ToolKit</option><option value="toolkitall">ToolKitAll</option><option value="toolkitbookgh">ToolKitBookgh</option></optgroup></select><div class="nowrap"><label for="term" class="offscreen_noflow" accesskey="/">Search term</label><div class="nowrap"><input type="text" name="term" id="term" title="Search Gene. Use up and down arrows to choose an item from the autocomplete." value="" class="jig-ncbiclearbutton jig-ncbiautocomplete" data-jigconfig="dictionary:'gene',disableUrl:'NcbiSearchBarAutoComplCtrl'" autocomplete="off" data-sbconfig="ds:'no',pjs:'yes',afs:'yes'" /></div><button id="search" type="submit" class="button_search nowrap" cmd="go">Search</button></div></div><ul class="searchlinks inline_list"><set></set><li><a href="/gene/advanced">Advanced</a></li><li class="help"><a id="help" class="jig-ncbihelpwindow" target="ncbihelp" name="help" href="/books/NBK3841/">Help</a></li></ul></div>
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<input name="EntrezSystem2.PEntrez.Gene.Gene_PageController.PreviousPageName" sid="1" type="hidden" value="results" />
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<h2 class="offscreen_noflow">Result Filters</h2>
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<div class="facet_cont" data-db="gene" data-default_grps="fg_gene-sources,fg_categories,fg_sequence-content,fg_status" data-sd="db:'gene',op:'select',term:'',qk:'3748',linkname:'',idsfromresult:'9782',extra:''"><ul class="facet" data-filter_id="gene-sources" id="_gene-sources"><li class="filter_grp "><div class="clearfix"><h3>Gene sources</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="genomic">Genomic</a></li></ul></li></ul><ul class="facet" data-filter_id="categories" id="_categories"><li class="filter_grp "><div class="clearfix"><h3>Categories</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="alt-splicing">Alternatively spliced</a></li><li class="fil_val"><a href="#" data-value_id="annotated-genes">Annotated genes</a></li><li class="fil_val"><a href="#" data-value_id="gene-type-protein-coding">Protein-coding</a></li></ul></li></ul><ul class="facet" data-filter_id="sequence-content" id="_sequence-content"><li class="filter_grp "><div class="clearfix"><h3>Sequence content</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="seq-ccds">CCDS</a></li><li class="fil_val"><a href="#" data-value_id="seq-ensembl">Ensembl</a></li><li class="fil_val"><a href="#" data-value_id="refseq">RefSeq</a></li><li class="fil_val"><a href="#" data-value_id="seq-refseqgene">RefSeqGene</a></li></ul></li></ul><ul class="facet" data-filter_id="status" id="_status"><li class="filter_grp "><div class="clearfix"><h3>Status</h3><a href="#" data-value_id="" class="clear clear_show">Clear</a></div><ul><li class="fil_val selected"><a href="#" data-value_id="current-only">Current</a><span class="fcount">(1)</span></li></ul></li></ul><div id="chr-location-facet-wrapper" data-bid="MCID_67c9e1dbd74f6769104129a8" data-hid="MCID_67c90f2d64f30b25346ccae2" data-qky="3748" class="disabled" style="display:none"><ul class="facet" data-filter_id="chromosomal-region" id="_chromosomal-region" data-of="yes"><li class="filter_grp of_grp"><div class="clearfix"><h3>Chromosome locations</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><a id="facet_ofchromosomal-region" href="#facet_of_divchromosomal-region" class="jig-ncbipopper" data-jigconfig="triggerPosition: 'middle right', destPosition: 'middle left', hasArrow: true, arrowDirection: 'left', closeEvent : 'click', openEvent: 'click', adjustFit: 'autoAdjust', openAnimation: 'none', closeAnimation: 'none', addCloseButton:true, width: '375px'" data-value_id="fetch_more">more...</a><div id="facet_of_divchromosomal-region" style="display:none;" class="of_popup"><h4>Chromosome locations</h4><label for="organism-filter" style="width:100%;margin-bottom:.2em;" class="">Select an organism by typing or scrolling</label><input type="text" placeholder="Enter text to narrow down the list" id="organism-filter" style="width:98%;" autocomplete="off" /><br /><div id="chr-region-tax-list"><select id="of_chromosomal-region" size="9" class="chr-region-tax-list" style="width:100%;"></select></div><div id="chr-location-info-ctrl" data-disabled="disabled"><div class="chr-field"><label for="chr-name">Chromosome</label><br /><select id="chr-name" class="chr-field" disabled="disabled"></select></div><div class="chr-field"><label for="chr-from">From</label><br /><input type="text" name="chr-from" id="chr-from" disabled="disabled" class="chr-field" /></div><div class="chr-field"><label for="chr-to">To</label><br /><input type="text" name="chr-to" id="chr-to" disabled="disabled" class="chr-field" /></div></div><div class="actions clearfix"><button class="jig-ncbibutton of_add apply-chr" data-jigconfig="'color': 'ui-ncbibutton-blue'">Apply</button></div></div></ul></li></ul></div><ul class="facet facet_reset"><li><a href="#" data-value_id="reset">Clear all</a></li></ul><ul class="facet_tools"><li><a id="more_filter_groups_link" href="#more_filter_groups" class="jig-ncbipopper" data-jigconfig="triggerPosition: 'middle right', destPosition: 'top left', hasArrow: true, arrowDirection: 'left', closeEvent : 'click', openEvent: 'click', adjustFit: 'autoAdjust', openAnimation: 'none', closeAnimation: 'none', addCloseButton:true, width: '180px'">
|
||
Show additional filters</a></li><div id="more_filter_groups" style="display:none;" class="facets_dialog"><button class="ui-ncbipopper-close-button ui-ncbipopper-close-button-generated ui-state-default ui-corner-all ui-button-text-only ui-ncbibutton ui-ncbibutton-blue" generated="true" role="button" aria-disabled="false"><span class="ui-button-text">x</span></button><h4>Additional filters</h4><ul class="filter_groups_more facet"><li><input type="checkbox" id="fg_gene-sources" /><label for="fg_gene-sources">Gene sources</label></li><li><input type="checkbox" id="fg_categories" /><label for="fg_categories">Categories</label></li><li><input type="checkbox" id="fg_sequence-content" /><label for="fg_sequence-content">Sequence content</label></li><li><input type="checkbox" id="fg_status" /><label for="fg_status">Status</label></li><li><input type="checkbox" id="fg_chromosomal-region" /><label for="fg_chromosomal-region">Chromosome locations</label></li><li><input id="fg_field_search" type="checkbox" /><label for="fg_field_search">Search fields</label></li></ul><div class="actions clearfix"><button class="filter_groups_more_apply jig-ncbibutton primary-action" id="filter_groups_apply" data-jigconfig="'color': 'ui-ncbibutton-blue'">Show</button></div></div></ul><input name="EntrezSystem2.PEntrez.Gene.Gene_Facets.FacetsUrlFrag" sid="1" type="hidden" value="filters=current-only" /><input name="EntrezSystem2.PEntrez.Gene.Gene_Facets.FacetSubmitted" sid="1" type="hidden" value="false" /><input name="EntrezSystem2.PEntrez.Gene.Gene_Facets.BMFacets" sid="1" type="hidden" value="" /></div>
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<span style="display: block; text-align: center;">S</span>
|
||
<span style="display: block; text-align: center;">I</span>
|
||
<span style="display: block; text-align: center;">D</span>
|
||
<span style="display: block; text-align: center;">E</span>
|
||
<span style="display: block; text-align: center;">B</span>
|
||
<span style="display: block; text-align: center;">A</span>
|
||
<span style="display: block; text-align: center;">R</span>
|
||
</div>
|
||
<!-- end show or hide sidebar -->
|
||
|
||
<div class="results_settings one_setting"><ul class="inline_list left display_settings"><li><a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Display" sid="0" href="#" class="jig-ncbipopper" data-jigconfig="triggerPosition : 'bottom center',destPosition : 'top center',destSelector : '#display_settings_menu_report', hasArrow : false,openEvent : 'click',closeEvent : 'click',isTriggerElementCloseClick: false,addCloseButton : false, groupName: 'entrez_pg'" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Display">Full Report<span href="#" class="tgt_dark"></span></a></li></ul><div id="display_settings_menu_report" class="disp_settings tabPopper"><fieldset class="format"><legend>Format</legend><ul class="column_list"><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="1" value="full_report" format="" id="full_report" checked="true" /><label for="full_report">Full Report</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="2" value="full_report" format="text" id="full_reporttext" /><label for="full_reporttext">Full Report (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="3" value="expression" format="" id="expression" /><label for="expression">Expression</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="4" value="gene_table" format="" id="gene_table" /><label for="gene_table">Gene Table</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="5" value="gene_table" format="text" id="gene_tabletext" /><label for="gene_tabletext">Gene Table (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="6" value="generif" format="" id="generif" /><label for="generif">GeneRIF</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="7" value="docsum" format="" id="docsum" /><label for="docsum">Summary</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="8" value="docsum" format="text" id="docsumtext" /><label for="docsumtext">Summary (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="9" value="tabular" format="" id="tabular" /><label for="tabular">Tabular</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="10" value="tabular" format="text" id="tabulartext" /><label for="tabulartext">Tabular (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="11" value="asn1" format="text" id="asn1text" /><label for="asn1text">ASN.1</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="12" value="xml" format="text" id="xmltext" /><label for="xmltext">XML</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="13" value="uilist" format="text" id="uilisttext" /><label for="uilisttext">UI List</label></li></ul></fieldset></div><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SetDisplay" sid="1" class="button_apply ncbipopper-close-button" style="display:none">Apply</button><h4 class="content_header send_to align_right jig-ncbipopper" id="sendto" data-jigconfig="triggerPosition:'bottom center', destPosition : 'top center',destSelector : '#send_to_menu', hasArrow : false, openEvent : 'click',closeEvent : 'click', isTriggerElementCloseClick: false, addCloseButton:true, groupName: 'entrez_pg', adjustFit:'none'"><a href="#" sourceContent="send_to_menu" class="tgt_dark">Send to:</a><script type="text/javascript">
|
||
jQuery(document).ready( function () {
|
||
jQuery("#send_to_menu input[type='radio']").click( function () {
|
||
var selectedValue = jQuery(this).val().toLowerCase();
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var selectedDiv = jQuery("#send_to_menu div." + selectedValue);
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if(selectedDiv.is(":hidden")){
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jQuery("#send_to_menu div.submenu:visible").slideUp();
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selectedDiv.slideDown();
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}
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});
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||
});
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||
|
||
jQuery("#sendto").bind("ncbipopperclose", function(){
|
||
jQuery("#send_to_menu div.submenu:visible").css("display","none");
|
||
jQuery("#send_to_menu input[type='radio']:checked").attr("checked",false);
|
||
});
|
||
|
||
</script></h4><div id="send_to_menu" class="tabPopper send_to"><fieldset><legend>Choose Destination</legend><ul class="column_list"><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendTo" sid="1" value="File" id="dest_File" /><label for="dest_File">File</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendTo" sid="2" value="AddToClipboard" id="dest_AddToClipboard" /><label for="dest_AddToClipboard">Clipboard</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendTo" sid="3" value="AddToCollections" id="dest_AddToCollections" /><label for="dest_AddToCollections">Collections</label></li></ul></fieldset><div class="submenu file" id="submenu_File" style="display: none;"><p id="submenu_File_hint" class="hidden"></p><ul><li><label for="file_format">Format</label><select id="file_format" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.FFormat" sid="1"><option value="full_report" format="text" selected="selected">Full Report (text)</option><option value="gene_table" format="text">Gene Table (text)</option><option value="docsum" format="text">Summary (text)</option><option value="tabular" format="text">Tabular (text)</option><option value="asn1" format="text">ASN.1</option><option value="xml" format="text">XML</option><option value="uilist" format="text">UI List</option></select></li></ul><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendToSubmit" sid="1" class="button_apply file ncbipopper-close-button" type="submit" cmd="File">Create File</button></div><div class="submenu addtoclipboard" id="submenu_AddToClipboard" style="display: none;"><p id="submenu_AddToClipboard_hint" class="hidden"></p><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendToSubmit" sid="2" class="button_apply clipboard ncbipopper-close-button" type="submit" cmd="AddToClipboard">Add to Clipboard</button></div><div class="submenu addtocollections" id="submenu_AddToCollections" style="display: none;"><p id="submenu_AddToCollections_hint" class="hidden"></p><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendToSubmit" sid="3" class="button_apply collections ncbipopper-close-button" type="submit" cmd="AddToCollections">Add to Collections</button></div></div><div><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.FileFormat" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastPresentation" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Presentation" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PageSize" sid="1" type="hidden" value="20" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastPageSize" sid="1" type="hidden" value="20" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Sort" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastSort" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.FileSort" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Format" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastFormat" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PrevPageSize" sid="1" type="hidden" value="20" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PrevPresentation" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PrevSort" sid="1" type="hidden" value="" /><input type="hidden" id="coll_startindex" name="CollectionStartIndex" value="1" /></div></div>
|
||
<div>
|
||
|
||
|
||
|
||
</div>
|
||
<div class="">
|
||
<div><span id="result_sel" class="nowrap"></span><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_ResultsController.ResultCount" sid="1" type="hidden" id="resultcount" value="1" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_ResultsController.RunLastQuery" sid="1" type="hidden" /></div>
|
||
|
||
</div>
|
||
<div id="messagearea" class="empty">
|
||
|
||
|
||
|
||
|
||
</div>
|
||
<div class="rprt full-rprt">
|
||
<div>
|
||
<div class="rprt-header">
|
||
<input type="hidden" id="gene-tax-id" value="9606" />
|
||
<h1 class="title" id="gene-name"><span class="gn" style="padding-right:.5em;">MATR3</span> matrin 3 [ <em class="tax">Homo sapiens</em> (human)
|
||
]
|
||
</h1>
|
||
<span class="geneid">Gene ID: 9782, updated on
|
||
4-Mar-2025</span>
|
||
</div>
|
||
<div class="download-datasets">
|
||
<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/axios/0.23.0/axios.min.js"></script>
|
||
<h4 class="download-datasets-popper jig-ncbipopper" id="download-asm" style="align-self:start" data-jigconfig="triggerPosition:'bottom center', destPosition : 'top center',destSelector : '#download-datasets-popper-menu', hasArrow : false, openEvent : 'click',closeEvent : 'click', isTriggerElementCloseClick: false, groupName: 'entrez_pg', adjustFit:'none'" role="button" aria-expanded="false" aria-haspopup="true">
|
||
<svg alt="download" class="dlbtn-icon" x="0px" y="0px" width="15px" height="15px" viewBox="0 0 60 60" enable-background="new 0 0 60 60" xml:space="preserve">
|
||
<g>
|
||
<polygon points="48.75,36.25 48.75,48.75 11.25,48.75 11.25,36.25 5,36.25 5,55 55,55 55,36.25 "></polygon>
|
||
<polygon points="42.5,23.75 36.25,23.75 36.25,5 23.75,5 23.75,23.75 17.5,23.75 30,42.5 "></polygon>
|
||
</g>
|
||
</svg>
|
||
<a href="#">Download Datasets</a>
|
||
</h4>
|
||
<div id="download-datasets-popper-menu" style="display:none;">
|
||
<div class="input-group">
|
||
<input type="checkbox" id="datasets-ft-gene-seq-fasta" value="FASTA_GENE" checked="checked" class="download-datasets-included-seq" />
|
||
<label for="datasets-ft-gene-seq-fasta">Gene Sequences (FASTA)</label>
|
||
</div>
|
||
<div class="input-group">
|
||
<input type="checkbox" id="datasets-ft-transcript-seq-fasta" value="FASTA_RNA" class="download-datasets-included-seq" />
|
||
<label for="datasets-ft-transcript-seq-fasta">Transcript sequences (FASTA)</label>
|
||
</div>
|
||
<div class="input-group">
|
||
<input type="checkbox" id="datasets-ft-protein-seq-fasta" value="FASTA_PROTEIN" class="download-datasets-included-seq" />
|
||
<label for="datasets-ft-protein-seq-fasta">Protein sequences(FASTA)</label>
|
||
</div>
|
||
<p style="margin-left:5px;">In addition, your package will include a detailed data report in both TSV and JSONL formats.</p>
|
||
<div class="input-group">
|
||
<label for="datasets-download-file-name">File name</label>
|
||
<input type="text" id="datasets-download-file-name" placeholder="Name your file" style="padding:5px;" value="MATR3_datasets.zip" />
|
||
</div>
|
||
<input type="hidden" id="download-datasets-base-url" value="https://api.ncbi.nlm.nih.gov/datasets/v2alpha/gene/download" />
|
||
<input type="hidden" id="gene-id-value" value="9782" />
|
||
<button id="datasets-download-submit" data-ga-action="click_begin_download" data-ga-label="download" class="jig-ncbibutton ui-state-default ui-corner-all ui-button-text-only ui-ncbibutton ui-ncbibutton-gray" role="button">
|
||
<span class="ui-button-text">Download</span>
|
||
</button>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-body">
|
||
|
||
|
||
<div class="rprt-section gene-summary">
|
||
<section class="rprt-section-header" id="summary">
|
||
<h2 id="header-summary">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-summary .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Summary</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Summary_2" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div id="summaryDiv" class="section">
|
||
<dl id="summaryDl">
|
||
<dt class="noline"> Official
|
||
Symbol</dt>
|
||
<dd class="noline">MATR3<span class="prov">provided by <a href="http://www.genenames.org/" target="_blank" title="HUGO Gene Nomenclature Committee">HGNC</a></span></dd>
|
||
<dt> Official
|
||
Full Name</dt>
|
||
<dd>matrin 3<span class="prov">provided by <a href="http://www.genenames.org/" target="_blank" title="HUGO Gene Nomenclature Committee">HGNC</a></span></dd>
|
||
<dt>Primary source</dt>
|
||
<dd>
|
||
<a href="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:6912" data-gblink-text="Ensembl">HGNC:HGNC:6912</a>
|
||
</dd>
|
||
<dt>See related</dt>
|
||
<dd>
|
||
<a href="http://www.ensembl.org/id/ENSG00000015479" data-gblink-text="Ensembl" class="genome-browser-link" data-genome-browser-link-sort="5" data-gb-url="http://www.ensembl.org/loc/ENSG00000015479">Ensembl:ENSG00000015479</a>
|
||
<a href="https://www.ncbi.nlm.nih.gov/omim/164015" data-gblink-text="Ensembl" ref="ordinalpos=1&ncbi_uid=9782&link_uid=164015">MIM:164015;</a>
|
||
<a href="https://www.alliancegenome.org/gene/HGNC:6912" data-gblink-text="Ensembl" ref="ordinalpos=1&ncbi_uid=9782&link_uid=HGNC:6912">AllianceGenome:HGNC:6912</a>
|
||
</dd>
|
||
<dt>Gene type</dt>
|
||
<dd>protein coding</dd>
|
||
<dt>RefSeq status</dt>
|
||
<dd>REVIEWED</dd>
|
||
<dt>Organism</dt>
|
||
<dd class="tax">
|
||
<a href="/Taxonomy/Browser/wwwtax.cgi?id=9606" ref="ordinalpos=1&ncbi_uid=9782&link_uid=9606">Homo sapiens</a>
|
||
</dd>
|
||
<dt>Lineage</dt>
|
||
<dd class="tax">Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo</dd>
|
||
<dt>Also known as</dt>
|
||
<dd>MPD2; ALS21; VCPDM</dd>
|
||
<dt>Summary</dt>
|
||
<dd>This gene encodes a nuclear matrix protein, which is proposed to stabilize certain messenger RNA species. Mutations of this gene are associated with distal myopathy 2, which often includes vocal cord and pharyngeal weakness. Alternatively spliced transcript variants, including read-through transcripts composed of the upstream small nucleolar RNA host gene 4 (non-protein coding) and matrin 3 gene sequence, have been identified. Pseudogenes of this gene are located on chromosomes 1 and X. [provided by RefSeq, Aug 2013]</dd>
|
||
<dt>Expression</dt>
|
||
<dd>Ubiquitous expression in brain (RPKM 79.2), thyroid (RPKM 60.8) and 25 other tissues <a href="#gene-expression">See more</a></dd>
|
||
<dt>Orthologs</dt>
|
||
<dd class="ortholog-links">
|
||
<a href="https://www.ncbi.nlm.nih.gov/gene/17184">mouse</a>
|
||
<a href="/gene/9782/ortholog/">all</a>
|
||
</dd>
|
||
<dt style="padding-top:.5em;">
|
||
<span class="new-icon">NEW</span>
|
||
</dt>
|
||
<dd style="padding-top:.5em;">
|
||
<strong>Try the new <a href="https://www.ncbi.nlm.nih.gov/datasets/gene/id/9782/" data-ga-category="summary" data-ga-action="click_datasets_link" data-ga-label="gene_table" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report.">Gene table</a></strong>
|
||
<br />
|
||
<strong>Try the new <a href="https://www.ncbi.nlm.nih.gov/datasets/gene/id/9782/products/" data-ga-category="summary" data-ga-action="click_datasets_link" data-ga-label="transcript_table" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report.">Transcript table</a></strong>
|
||
</dd>
|
||
</dl>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-genomic-context">
|
||
<section class="rprt-section-header" id="genomic-context">
|
||
<h2 id="header-genomic-context">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-genomic-context .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Genomic context</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Genomic_Context" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div class="gc_cont">
|
||
<div class="gt_cont_contents">
|
||
<div style="float:right"><span>See MATR3 in </span><a href="/genome/gdv/?context=gene&acc=9782" class="link-to-gdv genome-browser-link" data-genome-browser-link-sort="1" data-acc="GCF_000001405.40">Genome Data Viewer</a> </div>
|
||
<dl class="dl-chr-info" style="float:left;margin-top:0;">
|
||
<dt>Location: </dt>
|
||
<dd>
|
||
<span style="display:inline-block;">5q31.2</span>
|
||
</dd>
|
||
</dl>
|
||
</div>
|
||
<dl class="dl-chr-info exon-count">
|
||
<dt>Exon count: </dt>
|
||
<dd>23</dd>
|
||
</dl>
|
||
<div class="ui-ncbigrid-outer-div" id="genomic-context-tbl-location">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table class="jig-ncbigrid" data-jigconfig="">
|
||
<thead>
|
||
<tr>
|
||
<th style="max-width:15%">Annotation release</th>
|
||
<th style="max-width:10%">Status</th>
|
||
<th>Assembly</th>
|
||
<th>
|
||
<span title="Chromosome">Chr</span>
|
||
</th>
|
||
<th>Location</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td>RS_2024_08</td>
|
||
<td>current</td>
|
||
<td>GRCh38.p14 (<a href="/assembly/GCF_000001405.40/" ref="ncbi_uid=9782&link_uid=GCF_000001405.40">GCF_000001405.40</a>)</td>
|
||
<td>5</td>
|
||
<td>NC_000005.10 (139274101..139331677) </td>
|
||
</tr>
|
||
<tr>
|
||
<td>RS_2024_08</td>
|
||
<td>current</td>
|
||
<td>T2T-CHM13v2.0 (<a href="/assembly/GCF_009914755.1/" ref="ncbi_uid=9782&link_uid=GCF_009914755.1">GCF_009914755.1</a>)</td>
|
||
<td>5</td>
|
||
<td>NC_060929.1 (139800176..139857743) </td>
|
||
</tr>
|
||
<tr>
|
||
<td>RS_2024_09</td>
|
||
<td>previous assembly</td>
|
||
<td>GRCh37.p13 (<a href="/assembly/GCF_000001405.25/" ref="ncbi_uid=9782&link_uid=GCF_000001405.25">GCF_000001405.25</a>)</td>
|
||
<td>5</td>
|
||
<td>NC_000005.9 (138609790..138667366) </td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<p class="withnote margin_t2em"><strong>Chromosome 5 - NC_000005.10</strong><img usemap="#nbrMap9782_568815593" border="0" alt="Genomic Context describing neighboring genes" src="/gutils/geneneighb.fcgi?geneid=9782&nuc_gi=568815593&n0=SIL1&n1=RPL12P21&n2=LOC129389378&n3=LOC129994751&n4=RNU6-572P&n5=LOC127403981&n6=LOC127403982&n7=LOC129994752&n8=LOC129994753&n9=LOC124901081&n10=LOC129994754&n11=LOC129994755&n12=SNHG4&n13=MATR3&n14=SNORA74D&n15=SNORA74A&n16=LOC127403983&n17=LOC127403984&n18=RNA5SP195&n19=LOC123522801&n20=LOC126807526&n21=RN7SKP64&n22=PAIP2&n23=SLC23A1" /><map name="nbrMap9782_568815593" id="nbrMap9782_568815593">
|
||
<area shape="rect" onMouseOver="showtip(this,event,'SIL1 nucleotide exchange factor')" onMouseOut="hidetip()" coords="42,23,270,31" alt="Neighboring gene SIL1 nucleotide exchange factor" href="/gene/64374" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'ribosomal protein L12 pseudogene 21')" onMouseOut="hidetip()" coords="94,35,144,43" alt="Neighboring gene ribosomal protein L12 pseudogene 21" href="/gene/100270921" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'MPRA-validated peak5496 silencer')" onMouseOut="hidetip()" coords="180,35,250,43" alt="Neighboring gene MPRA-validated peak5496 silencer" href="/gene/129389378" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'ATAC-STARR-seq lymphoblastoid silent region 16405')" onMouseOut="hidetip()" coords="208,47,278,55" alt="Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16405" href="/gene/129994751" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138559318-138560164')" onMouseOut="hidetip()" coords="228,59,298,67" alt="Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138559318-138560164" href="/gene/127403981" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'H3K27ac hESC enhancer GRCh37_chr5:138567539-138568038')" onMouseOut="hidetip()" coords="235,71,305,79" alt="Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:138567539-138568038" href="/gene/127403982" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'RNA, U6 small nuclear 572, pseudogene')" onMouseOut="hidetip()" coords="242,83,297,91" alt="Neighboring gene RNA, U6 small nuclear 572, pseudogene" href="/gene/106481362" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'ATAC-STARR-seq lymphoblastoid active region 23217')" onMouseOut="hidetip()" coords="260,35,330,43" alt="Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23217" href="/gene/129994752" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'ATAC-STARR-seq lymphoblastoid silent region 16406')" onMouseOut="hidetip()" coords="265,95,335,103" alt="Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16406" href="/gene/129994753" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'uncharacterized LOC124901081')" onMouseOut="hidetip()" coords="269,107,348,115" alt="Neighboring gene uncharacterized LOC124901081" href="/gene/124901081" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'ATAC-STARR-seq lymphoblastoid active region 23218')" onMouseOut="hidetip()" coords="269,119,339,127" alt="Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23218" href="/gene/129994754" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'ATAC-STARR-seq lymphoblastoid silent region 16407')" onMouseOut="hidetip()" coords="270,131,340,139" alt="Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16407" href="/gene/129994755" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138629501-138630204')" onMouseOut="hidetip()" coords="286,23,356,31" alt="Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138629501-138630204" href="/gene/127403983" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138630205-138630907')" onMouseOut="hidetip()" coords="286,47,356,55" alt="Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:138630205-138630907" href="/gene/127403984" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'small nucleolar RNA, H/ACA box 74D')" onMouseOut="hidetip()" coords="291,143,341,151" alt="Neighboring gene small nucleolar RNA, H/ACA box 74D" href="/gene/109616975" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'Sharpr-MPRA regulatory region 13556')" onMouseOut="hidetip()" coords="292,155,362,163" alt="Neighboring gene Sharpr-MPRA regulatory region 13556" href="/gene/123522801" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'small nucleolar RNA, H/ACA box 74A')" onMouseOut="hidetip()" coords="294,167,344,175" alt="Neighboring gene small nucleolar RNA, H/ACA box 74A" href="/gene/26821" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'small nucleolar RNA host gene 4')" onMouseOut="hidetip()" coords="305,59,341,67" alt="Neighboring gene small nucleolar RNA host gene 4" href="/gene/724102" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'RNA, 5S ribosomal pseudogene 195')" onMouseOut="hidetip()" coords="306,71,361,79" alt="Neighboring gene RNA, 5S ribosomal pseudogene 195" href="/gene/100873457" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:138657767-138658966')" onMouseOut="hidetip()" coords="309,179,379,187" alt="Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:138657767-138658966" href="/gene/126807526" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'RN7SK pseudogene 64')" onMouseOut="hidetip()" coords="338,35,388,43" alt="Neighboring gene RN7SK pseudogene 64" href="/gene/106480852" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'poly(A) binding protein interacting protein 2')" onMouseOut="hidetip()" coords="360,23,410,31" alt="Neighboring gene poly(A) binding protein interacting protein 2" href="/gene/51247" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'solute carrier family 23 member 1')" onMouseOut="hidetip()" coords="371,47,423,55" alt="Neighboring gene solute carrier family 23 member 1" href="/gene/9963" />
|
||
</map>
|
||
</p>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-genomic-regions-transcripts-products">
|
||
<section class="rprt-section-header" id="genomic-regions-transcripts-products">
|
||
<h2 id="header-genomic-regions-transcripts-products">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-genomic-regions-transcripts-products .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Genomic regions, transcripts, and products</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Genomic_Regions_Transcripts_a" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div>
|
||
<div style="text-align:right;">Go to <a href="#reference-sequences">reference sequence details</a></div>
|
||
</div>
|
||
<div>
|
||
<p class="choose">
|
||
<label for="accession" class="label">Genomic Sequence: </label>
|
||
<select name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.accessionList" sid="1" id="accessionList" data-taxid="9606" data-geneid="9782">
|
||
<option value="NC_000005.10_139274100_139331676">NC_000005.10 Chromosome 5 Reference GRCh38.p14 Primary Assembly</option>
|
||
<option value="NG_012846.1_24637_62574">NG_012846.1 RefSeqGene</option>
|
||
<option value="NC_060929.1_139800175_139857742">NC_060929.1 Chromosome 5 Alternate T2T-CHM13v2.0</option>
|
||
<option value="NC_000005.9_138609789_138667365">NC_000005.9 Chromosome 5 Reference GRCh37.p13 Primary Assembly</option>
|
||
</select>
|
||
</p>
|
||
</div>
|
||
<div id="NC_000005" class="divAccession">
|
||
<div class="seq-viewer">
|
||
<p class="note-link">
|
||
<strong>Go to nucleotide:</strong>
|
||
<a title="Nucleotide Graphic report" href="/nuccore/NC_000005.10?report=graph&from=139265464&to=139340312&app_context=Gene&assm_context=GCF_000001405.40" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_000005.10">Graphics</a>
|
||
<a title="Nucleotide FASTA report" href="/nuccore/NC_000005.10?report=fasta&from=139274101&to=139331677" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_000005.10">FASTA</a>
|
||
<a title="Nucleotide GenBank report" href="/nuccore/NC_000005.10?report=genbank&from=139274101&to=139331677" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_000005.10">GenBank</a>
|
||
</p>
|
||
<div id="divNC_000005" class="SeqViewerApp" style="clear:both;" data-sv="appname=ncbigene&embedded=true&noslider=1&id=NC_000005.10&from=139265464&to=139340312&app_context=Gene&assm_context=GCF_000001405.40">
|
||
<a href="?appname=ncbigene&embedded=true&noslider=1&id=NC_000005.10&from=139265464&to=139340312&app_context=Gene&assm_context=GCF_000001405.40"></a>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NC_000005.10" sid="1" type="hidden" id="nucleotideLink_NC_000005_10_139274100_139331676" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NC_000005.10?report=graph&amp;from=139265464&amp;to=139340312&amp;app_context=Gene&amp;assm_context=GCF_000001405.40" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_000005.10">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NC_000005.10?report=fasta&amp;from=139274101&amp;to=139331677" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_000005.10">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NC_000005.10?report=genbank&amp;from=139274101&amp;to=139331677" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_000005.10">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NC_000005.10" sid="1" type="hidden" id="relString_NC_000005_10_139274100_139331676" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NC_000005.10&amp;from=139265464&amp;to=139340312&amp;app_context=Gene&amp;assm_context=GCF_000001405.40" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NG_012846.1" sid="1" type="hidden" id="nucleotideLink_NG_012846_1_24637_62574" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NG_012846.1?report=graph&amp;from=18946&amp;to=68265&amp;tracks=[key:sequence_track,name:Sequence,display_name:Sequence,category:Sequence,annots:Sequence,ShowLabel:false][key:gene_model_track,name:Genes---Unnamed,display_name:Genes,annots:Unnamed,Options:ShowAllButGenes,SNPs:false,CDSProductFeats:false,ShowLabelsForAllFeatures:true,HighlightMode:2][key:SNP_track,name:SNP,annots:SNP,Layout:Adaptive][key:SNP_Bins_track,name:Clinical Variants][key:SNP_Bins_track,name:Cited Variants][key:GWAS_track,name:GWAS Tracks,display_name:Association Results][key:alignment_track,category:Alignments,annots:Unnamed][key:alignment_track,category:Alignments,annots:NA000079160.1][key:alignment_track,category:Alignments,annots:NA000010065.1]" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NG_012846.1">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NG_012846.1?report=fasta&amp;from=24638&amp;to=62575" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NG_012846.1">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NG_012846.1?report=genbank&amp;from=24638&amp;to=62575" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NG_012846.1">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NG_012846.1" sid="1" type="hidden" id="relString_NG_012846_1_24637_62574" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NG_012846.1&amp;from=18946&amp;to=68265&amp;tracks=[key:sequence_track,name:Sequence,display_name:Sequence,category:Sequence,annots:Sequence,ShowLabel:false][key:gene_model_track,name:Genes---Unnamed,display_name:Genes,annots:Unnamed,Options:ShowAllButGenes,SNPs:false,CDSProductFeats:false,ShowLabelsForAllFeatures:true,HighlightMode:2][key:SNP_track,name:SNP,annots:SNP,Layout:Adaptive][key:SNP_Bins_track,name:Clinical Variants][key:SNP_Bins_track,name:Cited Variants][key:GWAS_track,name:GWAS Tracks,display_name:Association Results][key:alignment_track,category:Alignments,annots:Unnamed][key:alignment_track,category:Alignments,annots:NA000079160.1][key:alignment_track,category:Alignments,annots:NA000010065.1]" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NC_060929.1" sid="1" type="hidden" id="nucleotideLink_NC_060929_1_139800175_139857742" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NC_060929.1?report=graph&amp;from=139791540&amp;to=139866377&amp;app_context=Gene&amp;assm_context=GCF_009914755.1" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_060929.1">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NC_060929.1?report=fasta&amp;from=139800176&amp;to=139857743" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_060929.1">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NC_060929.1?report=genbank&amp;from=139800176&amp;to=139857743" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_060929.1">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NC_060929.1" sid="1" type="hidden" id="relString_NC_060929_1_139800175_139857742" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NC_060929.1&amp;from=139791540&amp;to=139866377&amp;app_context=Gene&amp;assm_context=GCF_009914755.1" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NC_000005.9" sid="1" type="hidden" id="nucleotideLink_NC_000005_9_138609789_138667365" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NC_000005.9?report=graph&amp;from=138601153&amp;to=138676001&amp;app_context=Gene&amp;assm_context=GCF_000001405.25" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_000005.9">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NC_000005.9?report=fasta&amp;from=138609790&amp;to=138667366" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_000005.9">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NC_000005.9?report=genbank&amp;from=138609790&amp;to=138667366" ref="ordinalpos=1&amp;ncbi_uid=9782&amp;link_uid=NC_000005.9">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NC_000005.9" sid="1" type="hidden" id="relString_NC_000005_9_138609789_138667365" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NC_000005.9&amp;from=138601153&amp;to=138676001&amp;app_context=Gene&amp;assm_context=GCF_000001405.25" />
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-gene-expression">
|
||
<section class="rprt-section-header" id="gene-expression">
|
||
<h2 id="header-gene-expression">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-gene-expression .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Expression</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Expression" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div>
|
||
<div style="text-align:right;">
|
||
<a href="/gene/9782/?report=expression" data-url="/gene/9782/?report=expression" id="gene-expression-see-details">See details</a>
|
||
</div>
|
||
<div id="gene-expression-app" data-url="https://www.ncbi.nlm.nih.gov/gene/9782" data-report-type="summary">
|
||
<div>
|
||
<script type="text/javascript">
|
||
|
||
window.tissues_data = {'adrenal 10wk': {'id': '9782_Adrenal_10wk_PRJNA270632', 'gene': 9782, 'source_name': 'adrenal 10wk', 'full_rpkm': 31.8162, 'exp_rpkm': 31.8, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723968}, 'adrenal 16wk': {'id': '9782_Adrenal_16wk_PRJNA270632', 'gene': 9782, 'source_name': 'adrenal 16wk', 'full_rpkm': 21.0489, 'exp_rpkm': 21.0, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723969}, 'adrenal 18wk': {'id': '9782_Adrenal_18wk_PRJNA270632', 'gene': 9782, 'source_name': 'adrenal 18wk', 'full_rpkm': 25.7203, 'exp_rpkm': 25.7, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723970}, 'adrenal 20wk': {'id': '9782_Adrenal_20wk_PRJNA270632', 'gene': 9782, 'source_name': 'adrenal 20wk', 'full_rpkm': 23.5256, 'exp_rpkm': 23.5, 'var': 0.482316, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723971}, 'heart 10wk': {'id': '9782_Heart_10wk;_PRJNA270632', 'gene': 9782, 'source_name': 'heart 10wk', 'full_rpkm': 51.4468, 'exp_rpkm': 51.4, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723972}, 'heart 11wk': {'id': '9782_Heart_11wk;_PRJNA270632', 'gene': 9782, 'source_name': 'heart 11wk', 'full_rpkm': 38.574, 'exp_rpkm': 38.6, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723973}, 'heart 17wk': {'id': '9782_Heart_17wk;_PRJNA270632', 'gene': 9782, 'source_name': 'heart 17wk', 'full_rpkm': 33.8889, 'exp_rpkm': 33.9, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723974}, 'heart 18wk': {'id': '9782_Heart_18wk;_PRJNA270632', 'gene': 9782, 'source_name': 'heart 18wk', 'full_rpkm': 36.9167, 'exp_rpkm': 36.9, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723975}, 'heart 20wk': {'id': '9782_Heart_20wk_PRJNA270632', 'gene': 9782, 'source_name': 'heart 20wk', 'full_rpkm': 43.7499, 'exp_rpkm': 43.7, 'var': 135.6186, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723976}, 'intestine 10wk': {'id': '9782_Intestine_10wk_PRJNA270632', 'gene': 9782, 'source_name': 'intestine 10wk', 'full_rpkm': 41.9808, 'exp_rpkm': 42.0, 'var': 210.826, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723977}, 'intestine 11wk': {'id': '9782_Intestine_11wk_PRJNA270632', 'gene': 9782, 'source_name': 'intestine 11wk', 'full_rpkm': 49.9688, 'exp_rpkm': 50.0, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723978}, 'intestine 15wk': {'id': '9782_Intestine_15wk_PRJNA270632', 'gene': 9782, 'source_name': 'intestine 15wk', 'full_rpkm': 31.6341, 'exp_rpkm': 31.6, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723979}, 'intestine 17wk': {'id': '9782_Intestine_17wk_PRJNA270632', 'gene': 9782, 'source_name': 'intestine 17wk', 'full_rpkm': 16.7497, 'exp_rpkm': 16.7, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723980}, 'intestine 20wk': {'id': '9782_Intestine_20wk_PRJNA270632', 'gene': 9782, 'source_name': 'intestine 20wk', 'full_rpkm': 45.4806, 'exp_rpkm': 45.5, 'var': 2.62692, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723981}, 'kidney 10wk': {'id': '9782_Kidney_10wk_PRJNA270632', 'gene': 9782, 'source_name': 'kidney 10wk', 'full_rpkm': 49.2772, 'exp_rpkm': 49.3, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723982}, 'kidney 16wk': {'id': '9782_Kidney_16wk_PRJNA270632', 'gene': 9782, 'source_name': 'kidney 16wk', 'full_rpkm': 22.5219, 'exp_rpkm': 22.5, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723983}, 'kidney 20wk': {'id': '9782_Kidney_20wk_PRJNA270632', 'gene': 9782, 'source_name': 'kidney 20wk', 'full_rpkm': 11.2596, 'exp_rpkm': 11.3, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723984}, 'lung 10wk': {'id': '9782_Lung_10wk_PRJNA270632', 'gene': 9782, 'source_name': 'lung 10wk', 'full_rpkm': 38.3986, 'exp_rpkm': 38.4, 'var': 2.0769, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723985}, 'lung 17wk': {'id': '9782_Lung_17wk_PRJNA270632', 'gene': 9782, 'source_name': 'lung 17wk', 'full_rpkm': 53.2439, 'exp_rpkm': 53.2, 'var': 0.0371298, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723986}, 'lung 20wk': {'id': '9782_Lung_20wk_PRJNA270632', 'gene': 9782, 'source_name': 'lung 20wk', 'full_rpkm': 36.0551, 'exp_rpkm': 36.1, 'var': 147.9314, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723987}, 'stomach 10wk': {'id': '9782_Stomach_10wk_PRJNA270632', 'gene': 9782, 'source_name': 'stomach 10wk', 'full_rpkm': 22.541, 'exp_rpkm': 22.5, 'var': 3.1303, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723988}, 'stomach 16wk': {'id': '9782_Stomach_16wk_PRJNA270632', 'gene': 9782, 'source_name': 'stomach 16wk', 'full_rpkm': 30.6727, 'exp_rpkm': 30.7, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723989}, 'stomach 18wk': {'id': '9782_Stomach_18wk_PRJNA270632', 'gene': 9782, 'source_name': 'stomach 18wk', 'full_rpkm': 32.4216, 'exp_rpkm': 32.4, 'var': 0.0, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723990}, 'stomach 20wk': {'id': '9782_Stomach_20wk_PRJNA270632', 'gene': 9782, 'source_name': 'stomach 20wk', 'full_rpkm': 30.7931, 'exp_rpkm': 30.8, 'var': 4.71168, 'project_desc': 'PRJNA270632', '_version_': 1785734412624723991}};
|
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window.details_data = {"adrenal 10wk": [{"id": "metadata_9606_SAMN03267754", "gene": 9782, "sample_id": "SAMN03267754", "full_rpkm": 31.8162, "exp_rpkm": 31.8, "exp_total": 924711, "project_desc": "PRJNA270632", "_version_": 1785734387345653765, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "adrenal 10wk", "exp_Mcount": 4852.92}], "adrenal 16wk": [{"id": "metadata_9606_SAMN03267755", "gene": 9782, "sample_id": "SAMN03267755", "full_rpkm": 21.0489, "exp_rpkm": 21.0, "exp_total": 916384, "project_desc": "PRJNA270632", "_version_": 1785734387345653764, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "adrenal 16wk", "exp_Mcount": 7269.31}], "adrenal 18wk": [{"id": "metadata_9606_SAMN03267761", "gene": 9782, "sample_id": "SAMN03267761", "full_rpkm": 25.7203, "exp_rpkm": 25.7, "exp_total": 1028274, "project_desc": "PRJNA270632", "_version_": 1785734387345653763, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "adrenal 18wk", "exp_Mcount": 6675.41}], "adrenal 20wk": [{"id": "metadata_9606_SAMN03267762", "gene": 9782, "sample_id": "SAMN03267762", "full_rpkm": 22.8311, "exp_rpkm": 22.8, "exp_total": 1033960, "project_desc": "PRJNA270632", "_version_": 1785734387345653761, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "adrenal 20wk", "exp_Mcount": 7561.75}, {"id": "metadata_9606_SAMN03267753", "gene": 9782, "sample_id": "SAMN03267753", "full_rpkm": 24.2201, "exp_rpkm": 24.2, "exp_total": 964317, "project_desc": "PRJNA270632", "_version_": 1785734387345653762, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "adrenal 20wk", "exp_Mcount": 6647.98}], "heart 10wk": [{"id": "metadata_9606_SAMN03267750", "gene": 9782, "sample_id": "SAMN03267750", "full_rpkm": 51.4468, "exp_rpkm": 51.4, "exp_total": 1645385, "project_desc": "PRJNA270632", "_version_": 1785734387345653760, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 10wk", "exp_Mcount": 5340.16}], "heart 11wk": [{"id": "metadata_9606_SAMN03267763", "gene": 9782, "sample_id": "SAMN03267763", "full_rpkm": 38.574, "exp_rpkm": 38.6, "exp_total": 1371584, "project_desc": "PRJNA270632", "_version_": 1785734387344605210, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 11wk", "exp_Mcount": 5937.09}], "heart 17wk": [{"id": "metadata_9606_SAMN03267757", "gene": 9782, "sample_id": "SAMN03267757", "full_rpkm": 33.8889, "exp_rpkm": 33.9, "exp_total": 1604945, "project_desc": "PRJNA270632", "_version_": 1785734387344605209, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 17wk", "exp_Mcount": 7907.66}], "heart 18wk": [{"id": "metadata_9606_SAMN03267751", "gene": 9782, "sample_id": "SAMN03267751", "full_rpkm": 36.9167, "exp_rpkm": 36.9, "exp_total": 1410780, "project_desc": "PRJNA270632", "_version_": 1785734387344605208, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 18wk", "exp_Mcount": 6380.91}], "heart 20wk": [{"id": "metadata_9606_SAMN03267756", "gene": 9782, "sample_id": "SAMN03267756", "full_rpkm": 36.5608, "exp_rpkm": 36.6, "exp_total": 2377154, "project_desc": "PRJNA270632", "_version_": 1785734387344605205, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 20wk", "exp_Mcount": 10856.4}, {"id": "metadata_9606_SAMN03267764", "gene": 9782, "sample_id": "SAMN03267764", "full_rpkm": 60.1766, "exp_rpkm": 60.2, "exp_total": 1837151, "project_desc": "PRJNA270632", "_version_": 1785734387344605206, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 20wk", "exp_Mcount": 5097.56}, {"id": "metadata_9606_SAMN03267760", "gene": 9782, "sample_id": "SAMN03267760", "full_rpkm": 34.5121, "exp_rpkm": 34.5, "exp_total": 1238931, "project_desc": "PRJNA270632", "_version_": 1785734387344605207, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "heart 20wk", "exp_Mcount": 5994.06}], "intestine 10wk": [{"id": "metadata_9606_SAMN03267752", "gene": 9782, "sample_id": "SAMN03267752", "full_rpkm": 27.461, "exp_rpkm": 27.5, "exp_total": 1284264, "project_desc": "PRJNA270632", "_version_": 1785734387344605203, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 10wk", "exp_Mcount": 7808.8}, {"id": "metadata_9606_SAMN03267759", "gene": 9782, "sample_id": "SAMN03267759", "full_rpkm": 56.5006, "exp_rpkm": 56.5, "exp_total": 2337152, "project_desc": "PRJNA270632", "_version_": 1785734387344605204, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 10wk", "exp_Mcount": 6906.84}], "intestine 11wk": [{"id": "metadata_9606_SAMN03267758", "gene": 9782, "sample_id": "SAMN03267758", "full_rpkm": 49.9688, "exp_rpkm": 50.0, "exp_total": 1297276, "project_desc": "PRJNA270632", "_version_": 1785734387344605202, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 11wk", "exp_Mcount": 4334.9}], "intestine 15wk": [{"id": "metadata_9606_SAMN03267775", "gene": 9782, "sample_id": "SAMN03267775", "full_rpkm": 31.6341, "exp_rpkm": 31.6, "exp_total": 754123, "project_desc": "PRJNA270632", "_version_": 1785734387344605201, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 15wk", "exp_Mcount": 3980.45}], "intestine 17wk": [{"id": "metadata_9606_SAMN03267782", "gene": 9782, "sample_id": "SAMN03267782", "full_rpkm": 16.7497, "exp_rpkm": 16.7, "exp_total": 969601, "project_desc": "PRJNA270632", "_version_": 1785734387344605200, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 17wk", "exp_Mcount": 9665.65}], "intestine 20wk": [{"id": "metadata_9606_SAMN03267766", "gene": 9782, "sample_id": "SAMN03267766", "full_rpkm": 43.8598, "exp_rpkm": 43.9, "exp_total": 1093064, "project_desc": "PRJNA270632", "_version_": 1785734387344605198, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 20wk", "exp_Mcount": 4161.26}, {"id": "metadata_9606_SAMN03267769", "gene": 9782, "sample_id": "SAMN03267769", "full_rpkm": 47.1013, "exp_rpkm": 47.1, "exp_total": 1098460, "project_desc": "PRJNA270632", "_version_": 1785734387344605199, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "intestine 20wk", "exp_Mcount": 3894.01}], "kidney 10wk": [{"id": "metadata_9606_SAMN03267784", "gene": 9782, "sample_id": "SAMN03267784", "full_rpkm": 49.2772, "exp_rpkm": 49.3, "exp_total": 1394619, "project_desc": "PRJNA270632", "_version_": 1785734387344605197, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "kidney 10wk", "exp_Mcount": 4725.59}], "kidney 16wk": [{"id": "metadata_9606_SAMN03267772", "gene": 9782, "sample_id": "SAMN03267772", "full_rpkm": 22.5219, "exp_rpkm": 22.5, "exp_total": 2062129, "project_desc": "PRJNA270632", "_version_": 1785734387344605196, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "kidney 16wk", "exp_Mcount": 15288.2}], "kidney 20wk": [{"id": "metadata_9606_SAMN03267777", "gene": 9782, "sample_id": "SAMN03267777", "full_rpkm": 11.2596, "exp_rpkm": 11.3, "exp_total": 693225, "project_desc": "PRJNA270632", "_version_": 1785734387344605195, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "kidney 20wk", "exp_Mcount": 10280.0}], "lung 10wk": [{"id": "metadata_9606_SAMN03267770", "gene": 9782, "sample_id": "SAMN03267770", "full_rpkm": 36.9575, "exp_rpkm": 37.0, "exp_total": 1317571, "project_desc": "PRJNA270632", "_version_": 1785734387344605193, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "lung 10wk", "exp_Mcount": 5952.75}, {"id": "metadata_9606_SAMN03267767", "gene": 9782, "sample_id": "SAMN03267767", "full_rpkm": 39.8398, "exp_rpkm": 39.8, "exp_total": 1248181, "project_desc": "PRJNA270632", "_version_": 1785734387344605194, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "lung 10wk", "exp_Mcount": 5231.26}], "lung 17wk": [{"id": 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"sample_id": "SAMN03267768", "full_rpkm": 48.2178, "exp_rpkm": 48.2, "exp_total": 1834463, "project_desc": "PRJNA270632", "_version_": 1785734387344605190, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "lung 20wk", "exp_Mcount": 6352.54}], "stomach 10wk": [{"id": "metadata_9606_SAMN03267773", "gene": 9782, "sample_id": "SAMN03267773", "full_rpkm": 24.3103, "exp_rpkm": 24.3, "exp_total": 958304, "project_desc": "PRJNA270632", "_version_": 1785734387344605187, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 10wk", "exp_Mcount": 6582.02}, {"id": "metadata_9606_SAMN03267779", "gene": 9782, "sample_id": "SAMN03267779", "full_rpkm": 20.7717, "exp_rpkm": 20.8, "exp_total": 899926, "project_desc": "PRJNA270632", "_version_": 1785734387344605188, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 10wk", "exp_Mcount": 7234.02}], "stomach 16wk": [{"id": "metadata_9606_SAMN03267774", "gene": 9782, "sample_id": "SAMN03267774", "full_rpkm": 30.6727, "exp_rpkm": 30.7, "exp_total": 1142503, "project_desc": "PRJNA270632", "_version_": 1785734387344605186, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 16wk", "exp_Mcount": 6219.43}], "stomach 18wk": [{"id": "metadata_9606_SAMN03267771", "gene": 9782, "sample_id": "SAMN03267771", "full_rpkm": 32.4216, "exp_rpkm": 32.4, "exp_total": 1130169, "project_desc": "PRJNA270632", "_version_": 1785734387344605185, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 18wk", "exp_Mcount": 5820.42}], "stomach 20wk": [{"id": "metadata_9606_SAMN03267765", "gene": 9782, "sample_id": "SAMN03267765", "full_rpkm": 33.8478, "exp_rpkm": 33.8, "exp_total": 911116, "project_desc": "PRJNA270632", "_version_": 1785734387342508032, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 20wk", "exp_Mcount": 4494.58}, {"id": "metadata_9606_SAMN03267781", "gene": 9782, "sample_id": "SAMN03267781", "full_rpkm": 29.5285, "exp_rpkm": 29.5, "exp_total": 807520, "project_desc": "PRJNA270632", "_version_": 1785734387343556608, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 20wk", "exp_Mcount": 4566.24}, {"id": "metadata_9606_SAMN03267783", "gene": 9782, "sample_id": "SAMN03267783", "full_rpkm": 29.003, "exp_rpkm": 29.0, "exp_total": 834549, "project_desc": "PRJNA270632", "_version_": 1785734387344605184, "is_metadata": true, "is_sample": true, "taxid": 9606, "source_name": "stomach 20wk", "exp_Mcount": 4804.58}]}
|
||
window.taxId = 9606
|
||
</script>
|
||
|
||
|
||
<div>
|
||
|
||
|
||
|
||
<select name="p" id="project-selector">
|
||
|
||
|
||
<option value="SRP051249" selected="selected" data-bioproject="PRJNA270632">
|
||
|
||
Tissue-specific circular RNA induction during human fetal development
|
||
|
||
</option>
|
||
|
||
|
||
|
||
<option value="SRP056969" data-bioproject="PRJNA280600">
|
||
|
||
RNA sequencing of total RNA from 20 human tissues
|
||
|
||
|
||
</option>
|
||
|
||
|
||
|
||
<option value="ERP003613" data-bioproject="PRJEB4337">
|
||
|
||
HPA RNA-seq normal tissues
|
||
|
||
|
||
</option>
|
||
|
||
|
||
|
||
</select>
|
||
|
||
|
||
|
||
<ul id="project-summary">
|
||
<li id="project-summary-title">Project title:
|
||
|
||
Tissue-specific circular RNA induction during human fetal development
|
||
|
||
</li>
|
||
|
||
|
||
<li id="project-summary-desc">Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA</li>
|
||
|
||
|
||
|
||
<li id="project-summary-bioprojects">BioProject: <a href="/bioproject/PRJNA270632/">PRJNA270632</a>
|
||
</li>
|
||
|
||
<li id="project-summary-pubs">Publication:
|
||
|
||
|
||
<span><a href="/pubmed/26076956/">PMID 26076956</a></span>
|
||
|
||
</li>
|
||
|
||
|
||
<li id="project-summary-analysis-date">Analysis date: Mon Apr 2 22:54:59 2018</li>
|
||
|
||
</ul>
|
||
|
||
|
||
|
||
<div id="gene-expr-details" class="expression-chart"></div>
|
||
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<script type="text/javascript" src="https://www.gstatic.com/charts/loader.js"></script>
|
||
<script type="text/javascript">
|
||
google.charts.load('current', {
|
||
'packages':[ 'corechart']
|
||
});
|
||
|
||
</script>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-bibliography">
|
||
<section class="rprt-section-header" id="bibliography"><h2 id="header-bibliography"><a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-bibliography .rprt-section-body'"><span class="ui-ncbitoggler-master-text">Bibliography</span></a></h2><div class="rprt-section-tools"><a href="#top" title="Go to the top of the page" class="gene-top-page"><span>Go to the top of the page</span></a><a href="/books/NBK3841/#EntrezGene.Bibliography" title="Help" class="gene-section-help"><span>Help</span></a></div></section>
|
||
<div class="rprt-section-body" style="">
|
||
<div class="generif-pubmed">
|
||
<h3 id="relatedarticlesinpubmed">
|
||
<a href="#" class="jig-ncbitoggler-open">Related articles in PubMed</a>
|
||
</h3>
|
||
<div class="generefbl-link">
|
||
<ol class="generef-link">
|
||
<li>
|
||
<a href="/pubmed/21182838/" ref="ordinalpos=1&ncbi_uid=9782&link_uid=21182838">Matrin 3 as a key regulator of endothelial cell survival.</a>
|
||
<span class="pubmed-auth-date"> Przygodzka P, <em>et al</em>. Exp Cell Res, 2011 Apr 1. PMID 21182838</span>
|
||
</li>
|
||
<li>
|
||
<a href="/pubmed/25677933/" ref="ordinalpos=2&ncbi_uid=9782&link_uid=25677933">Impairment of respiratory function in late-onset distal myopathy due to MATR3 Mutation.</a>
|
||
<span class="pubmed-auth-date"> Kraya T, <em>et al</em>. Muscle Nerve, 2015 Jun. PMID 25677933</span>
|
||
</li>
|
||
<li>
|
||
<a href="/pubmed/24558381/" ref="ordinalpos=3&ncbi_uid=9782&link_uid=24558381">pY RNA1-s2: a highly retina-enriched small RNA that selectively binds to Matrin 3 (Matr3).</a>
|
||
<span class="pubmed-auth-date"> Yamazaki F, <em>et al</em>. PLoS One, 2014. PMID 24558381, <span class="pubmed-pmc-link"><a href="/pmc/articles/PMC3928194/" ref="ordinalpos=0&ncbi_uid=9782&link_uid=PMC3928194">Free PMC Article</a></span></span>
|
||
</li>
|
||
<li>
|
||
<a href="/pubmed/29763601/" ref="ordinalpos=4&ncbi_uid=9782&link_uid=29763601">The p.S85C-mutation in MATR3 impairs stress granule formation in Matrin-3 myopathy.</a>
|
||
<span class="pubmed-auth-date"> Mensch A, <em>et al</em>. Exp Neurol, 2018 Aug. PMID 29763601</span>
|
||
</li>
|
||
<li>
|
||
<a href="/pubmed/21858232/" ref="ordinalpos=5&ncbi_uid=9782&link_uid=21858232">Matrin 3 binds and stabilizes mRNA.</a>
|
||
<span class="pubmed-auth-date"> Salton M, <em>et al</em>. PLoS One, 2011. PMID 21858232, <span class="pubmed-pmc-link"><a href="/pmc/articles/PMC3157474/" ref="ordinalpos=0&ncbi_uid=9782&link_uid=PMC3157474">Free PMC Article</a></span></span>
|
||
</li>
|
||
</ol>
|
||
<p class="see-all-pm">
|
||
<a href="/pubmed?LinkName=gene_pubmed&from_uid=9782" title="See all 372 citations in Pubmed">See all (372) citations in PubMed</a>
|
||
</p>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="generif-pubmed generif">
|
||
<h3 id="generifsgenereferencesintofunctions">
|
||
<a href="#" class="jig-ncbitoggler-open">GeneRIFs: Gene References Into Functions</a>
|
||
</h3>
|
||
<div>
|
||
<a href="/gene/about-generif" class="whatisthis">What's a GeneRIF?</a>
|
||
<div class="generefbl-link">
|
||
<ol class="generef-link">
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/38813817" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=38813817">The role of Matrin-3 in physiology and its dysregulation in disease.</a>
|
||
<div id="gene-popper1" class="gene-rif-popper">Title: The role of Matrin-3 in physiology and its dysregulation in disease.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/38320753" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=38320753">MATR3 pathogenic variants differentially impair its cryptic splicing repression function.</a>
|
||
<div id="gene-popper2" class="gene-rif-popper">Title: MATR3 pathogenic variants differentially impair its cryptic splicing repression function.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/38252499" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=38252499">Matrin-3 acts as a potential biomarker and promotes hepatocellular carcinoma progression by interacting with cell cycle-regulating genes.</a>
|
||
<div id="gene-popper3" class="gene-rif-popper">Title: Matrin-3 acts as a potential biomarker and promotes hepatocellular carcinoma progression by interacting with cell cycle-regulating genes.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/38341433" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=38341433">Matrin3 mediates differentiation through stabilizing chromatin loop-domain interactions and YY1 mediated enhancer-promoter interactions.</a>
|
||
<div id="gene-popper4" class="gene-rif-popper">Title: Matrin3 mediates differentiation through stabilizing chromatin loop-domain interactions and YY1 mediated enhancer-promoter interactions.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/37913560" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=37913560">The effect on m[6]A methylation writer complex by the reduced MATR3 in pterygium.</a>
|
||
<div id="gene-popper5" class="gene-rif-popper">Title: The effect on m(6)A methylation writer complex by the reduced MATR3 in pterygium.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/37703175" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=37703175">MATR3 is an endogenous inhibitor of DUX4 in FSHD muscular dystrophy.</a>
|
||
<div id="gene-popper6" class="gene-rif-popper">Title: MATR3 is an endogenous inhibitor of DUX4 in FSHD muscular dystrophy.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/37011198" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=37011198">Neuronal activity regulates Matrin 3 abundance and function in a calcium-dependent manner through calpain-mediated cleavage and calmodulin binding.</a>
|
||
<div id="gene-popper7" class="gene-rif-popper">Title: Neuronal activity regulates Matrin 3 abundance and function in a calcium-dependent manner through calpain-mediated cleavage and calmodulin binding.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/36822174" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=36822174">LncRNA15691 promotes T-ALL infiltration by upregulating CCR9 via increased MATR3 stability.</a>
|
||
<div id="gene-popper8" class="gene-rif-popper">Title: LncRNA15691 promotes T-ALL infiltration by upregulating CCR9 via increased MATR3 stability.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/36368640" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=36368640">Matr3 reshapes m6A modification complex to alleviate macrophage inflammation during atherosclerosis.</a>
|
||
<div id="gene-popper9" class="gene-rif-popper">Title: Matr3 reshapes m6A modification complex to alleviate macrophage inflammation during atherosclerosis.</div>
|
||
</li>
|
||
<li class="gene-rif-popper">
|
||
<a href="/pubmed/35723727" target="_blank" class="gene-rif-popper" ref="ordinalpos=1&ncbi_uid=9782&link_uid=35723727">Prognostic significance of MATR3 in stage I and II non-small cell lung cancer patients.</a>
|
||
<div id="gene-popper10" class="gene-rif-popper">Title: Prognostic significance of MATR3 in stage I and II non-small cell lung cancer patients.</div>
|
||
</li>
|
||
</ol>
|
||
</div>
|
||
<div class="submit-genrif">
|
||
<span>Submit:</span>
|
||
<a href="/gene/submit-generif/?geneId=9782&sym=MATR3&name=matrin 3&org=Homo sapiens">New GeneRIF</a>
|
||
<a href="/RefSeq/update.cgi?geneid=9782&symbol=MATR3;task=fixpub">Correction</a>
|
||
<a href="https://www.ncbi.nlm.nih.gov/gene?db=gene&report=generif&term=9782" class="seeall-generif">See all GeneRIFs (63)</a>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-phenotypes">
|
||
<section class="rprt-section-header" id="phenotypes">
|
||
<h2 id="header-phenotypes">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-phenotypes .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Phenotypes</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Phenotype" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body info-phenotype">
|
||
<p class="nochild-link">
|
||
<a href="/gtr/tests/?term=MATR3[gene]">Find tests for this gene in the NIH Genetic Testing Registry (GTR)</a>
|
||
</p>
|
||
<p class="nochild-link">
|
||
<a href="/gap/PheGenI?tab=1&gene=9782">Review eQTL and phenotype association data in this region using PheGenI</a>
|
||
</p>
|
||
<div>
|
||
<h3 id="associatedconditions">Associated conditions</h3>
|
||
<table class="jig-ncbigrid gtr-associated-cond">
|
||
<thead>
|
||
<tr>
|
||
<th class="description">Description</th>
|
||
<th>Tests</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td>
|
||
<a href="/gtr/conditions/C3807521" ref="ncbi_uid=9782&link_uid=C3807521">Amyotrophic lateral sclerosis type 21</a>
|
||
<div class="gtr-associated-cond-extra">
|
||
<span class="gtr-associated-cond-extra-i">MedGen: <a href="/medgen/C3807521" ref="ncbi_uid=9782&link_uid=C3807521">C3807521</a></span>
|
||
<span class="gtr-associated-cond-extra-i">OMIM: <a href="https://www.ncbi.nlm.nih.gov/omim/606070" ref="ncbi_uid=9782"> 606070</a></span>
|
||
<span class="gtr-associated-cond-extra-i">GeneReviews: <a href="/books/NBK1450" ref="ncbi_uid=9782">Amyotrophic Lateral Sclerosis Overview</a></span>
|
||
</div>
|
||
</td>
|
||
<td>
|
||
<a href="/gtr/tests/?term=C3807521[DISCUI]&condition=C3807521&compare_labs=1" ref="ncbi_uid=9782">Compare labs</a>
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-variation">
|
||
<section class="rprt-section-header" id="variation">
|
||
<h2 id="header-variation">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-variation .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Variation</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.variation" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<p class="nochild-link">
|
||
<a href="/clinvar/?term=MATR3[gene]" ref="log$=recordlinks">See variants in ClinVar</a>
|
||
</p>
|
||
<p class="nochild-link">
|
||
<a href="/dbvar?LinkName=gene_dbvar&from_uid=9782" ref="log$=recordlinks">See studies and variants in dbVar</a>
|
||
</p>
|
||
<p class="nochild-link">
|
||
<a href="/variation/view/?q=9782[geneid]&assm=GCF_000001405.25" ref="log$=recordlinks" data-genome-browser-link-sort="3" class="genome-browser-link" data-gblink-text="Variation Viewer (GRCh37.p13)">See Variation Viewer (GRCh37.p13)</a>
|
||
</p>
|
||
<p class="nochild-link">
|
||
<a href="/variation/view/?q=9782[geneid]" ref="log$=recordlinks" data-genome-browser-link-sort="3" class="genome-browser-link" data-gblink-text="Variation Viewer (GRCh38)">See Variation Viewer (GRCh38)</a>
|
||
</p>
|
||
<set></set>
|
||
<set></set>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-HIV-1-interactions">
|
||
<section class="rprt-section-header" id="HIV-1-interactions">
|
||
<h2 id="header-HIV-1-interactions">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-HIV-1-interactions .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">HIV-1 interactions</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.HIV1_interactions" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div class="fgrid">
|
||
<h3 id="replicationinteractions">Replication interactions</h3>
|
||
<table summary="replication interactions" class="jig-ncbigrid">
|
||
<thead>
|
||
<tr>
|
||
<th id="hivinter">Interaction</th>
|
||
<th id="hivpub">Pubs</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td headers="hivinter">siRNA knockdown of MATR3 improves the ZAP-induced degradation of HIV-1 transcripts; MATR3 enhances HIV-1 replication</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 26129669" href="/pubmed/26129669">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
<h3 id="proteininteractions">Protein interactions</h3>
|
||
<table summary="protein interactions" class="jig-ncbigrid">
|
||
<thead>
|
||
<tr>
|
||
<th id="hivprotein">Protein</th>
|
||
<th id="gene-hivprotein">Gene</th>
|
||
<th id="hivinter">Interaction</th>
|
||
<th id="hivpub">Pubs</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/28876544">Envelope surface glycoprotein gp120</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155971">env</a>
|
||
</td>
|
||
<td headers="hivinter">Tandem affinity purification and mass spectrometry analysis identify matrin 3 (MATR3), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 23125841" href="/pubmed/23125841">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/28872819">Gag-Pol</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155348">gag-pol</a>
|
||
</td>
|
||
<td headers="hivinter">Tandem affinity purification and mass spectrometry analysis identify matrin 3 (MATR3), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 23125841" href="/pubmed/23125841">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/28872818">Nef</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/156110">nef</a>
|
||
</td>
|
||
<td headers="hivinter">Tandem affinity purification and mass spectrometry analysis identify matrin 3 (MATR3), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 23125841" href="/pubmed/23125841">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/9629360">Pr55(Gag)</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155030">gag</a>
|
||
</td>
|
||
<td headers="hivinter">Tandem affinity purification and mass spectrometry analysis identify matrin 3 (MATR3), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 23125841" href="/pubmed/23125841">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein"></td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155030">gag</a>
|
||
</td>
|
||
<td headers="hivinter">Overexpression of Matrin 3 increases HIV-1 Gag expression; knockdown of Matrin 3 decreases HIV-1 Gag expression</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 21771348,21771347,21771346" href="/pubmed/21771348,21771347,21771346">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/9629359">Rev</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155908">rev</a>
|
||
</td>
|
||
<td headers="hivinter">Association of PSF with MATR3 is involved in nuclear retention of unspliced HIV-1 RNA and Rev activity</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 23158102" href="/pubmed/23158102">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein"></td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155908">rev</a>
|
||
</td>
|
||
<td headers="hivinter">The interaction of HIV-1 Rev and Matrin 3 specifically requires the presence of a Rev-dependent RRE-containing RNA. Two RNA recognition motifs (residues 586-612) in Matrin 3 are required for activity on Rev/RRE</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 21771348,21771347,21771346" href="/pubmed/21771348,21771347,21771346">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein"></td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155908">rev</a>
|
||
</td>
|
||
<td headers="hivinter">HIV-1 Rev interacting protein, matrin 3 (MATR3), is identified by the in-vitro binding experiments involving cytosolic or nuclear extracts from HeLa cells. The interaction of Rev with MATR3 is increased by RRE</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 22174317" href="/pubmed/22174317">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/9629358">Tat</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155871">tat</a>
|
||
</td>
|
||
<td headers="hivinter">Matrin 3 protein (MATR3) is identified to interact with HIV-1 Tat mutant Nullbasic in HeLa cells by LC MS/MS</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 25496916" href="/pubmed/25496916">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein">
|
||
<a href="/protein/28872817">Vpr</a>
|
||
</td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155807">vpr</a>
|
||
</td>
|
||
<td headers="hivinter">A stable-isotope labeling by amino acids in cell culture coupled with mass spectrometry-based proteomics identifies upregulation of matrin 3 (MATR3) expression by HIV-1 Vpr in Vpr transduced macrophages</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 23874603" href="/pubmed/23874603">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="hivprotein"></td>
|
||
<td headers="gene-hivprotein">
|
||
<a href="/gene/155807">vpr</a>
|
||
</td>
|
||
<td headers="hivinter">HIV-1 Vpr is identified to have a physical interaction with matrin 3 (MATR3) in human HEK293 and/or Jurkat cell lines by using affinity tagging and purification mass spectrometry analyses</td>
|
||
<td headers="hivpub">
|
||
<a title="PubMed Id(s): 22190034" href="/pubmed/22190034">PubMed</a>
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
<p class="withnote">
|
||
<a class="note" href="/genome/viruses/retroviruses/hiv-1/interactions/">Go to the HIV-1, Human Interaction Database </a>
|
||
</p>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
|
||
<div class="rprt-section gene-interactions">
|
||
<section class="rprt-section-header" id="interactions">
|
||
<h2 id="header-interactions">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-interactions .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Interactions</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Interactions" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<table summary="Gene Interaction" class="jig-ncbiservergrid" data-jigconfig="webservice:'/gene/9782/data/interaction/',webserviceParams: 'p$l=Ajax&p$debugoutput=off', isServersideLoad:true, isServersidePaging: true,isServersidePagingCached: true,pageSize:25">
|
||
<thead>
|
||
<tr>
|
||
<th id="inter-prod">Products</th>
|
||
<th id="inter-interactant">Interactant</th>
|
||
<th id="inter-otherGene">Other Gene</th>
|
||
<th id="inter-compl">Complex</th>
|
||
<th id="inter-source">Source</th>
|
||
<th id="inter-pubs">Pubs</th>
|
||
<th id="inter-desc">Description</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody></tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-general-gene-info">
|
||
<section class="rprt-section-header" id="general-gene-info">
|
||
<h2 id="header-general-gene-info">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-general-gene-info .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">General gene information</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.General_Gene_Information" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
|
||
<div class="rprt-section-body" style="">
|
||
<div id="gene-markers">
|
||
<h3 id="markers">
|
||
<a class="jig-ncbitoggler">Markers</a>
|
||
</h3>
|
||
<div>
|
||
<ul class="marker odd">
|
||
<li class="marker">GDB:434012 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=157204%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=157204">UniSTS:157204</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">D10S275 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=147992%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=147992">UniSTS:147992</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">RH70751 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=85788%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=85788">UniSTS:85788</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">RH121793 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=134943%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=134943">UniSTS:134943</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">RH91334 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=89634%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=89634">UniSTS:89634</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">G32456 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=117041%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=117041">UniSTS:117041</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">D8S2279 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=473907%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=473907">UniSTS:473907</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">RH69161 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=92491%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=92491">UniSTS:92491</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">L18426 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=34648%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=34648">UniSTS:34648</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">D22S1584 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=473695%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=473695">UniSTS:473695</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">A007K48 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=865%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=865">UniSTS:865</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">G35510 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=44150%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=44150">UniSTS:44150</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">RH36905 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=87932%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=87932">UniSTS:87932</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">D5S393 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=78751%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=78751">UniSTS:78751</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">D5S2530 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=53674%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=53674">UniSTS:53674</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">A009D38 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=20437%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=20437">UniSTS:20437</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">bac51452T (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=181464%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=181464">UniSTS:181464</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker ">
|
||
<li class="marker">WI-15469 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=47086%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=47086">UniSTS:47086</a></li></ul></li>
|
||
</ul>
|
||
<ul class="marker odd">
|
||
<li class="marker">RH64907 (e-PCR)<ul class="marker-link"><li><a href="https://www.ncbi.nlm.nih.gov/probe?term=8692%20%5BUniSTS%20ID%5D" ref="ordinalpos=1&ncbi_uid=9782&link_uid=8692">UniSTS:8692</a></li></ul></li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div>
|
||
<div class="infosec" id="Relatedpseudogenes"><h3 id="relatedpseudogenes"><a class="jig-ncbitoggler-open">Related pseudogene(s)</a></h3>
|
||
<dl class="geneinfo-subsec"><dt>2 found
|
||
|
||
<a href="/gene/?Term=related_functional_gene_9782%5Bgroup%5D">Review record(s) in Gene</a></dt></dl>
|
||
</div>
|
||
<div class="infosec" id="ReadthroughMATR3">
|
||
<h3 id="readthroughmatr3">
|
||
<a class="jig-ncbitoggler-open">Readthrough MATR3</a>
|
||
</h3>
|
||
<dl>
|
||
<dt>Included gene: <a href="/gene/724102">SNHG4</a></dt>
|
||
</dl>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="infosec">
|
||
<h3 id="homology">
|
||
<a class="jig-ncbitoggler-open">Homology</a>
|
||
</h3>
|
||
<ul class="geneinfo-subsec">
|
||
<li>
|
||
<a href="/gene/9782/ortholog/" id="ncbi-ortholog-link">NCBI Orthologs</a>
|
||
</li>
|
||
<a href="https://www.orthodb.org/?ncbi=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8178" target="_blank">
|
||
Orthologs from OrthoDB
|
||
</a>
|
||
</ul>
|
||
</div>
|
||
|
||
<!--<component id="Gene_InfoPathway"/>-->
|
||
|
||
<div class="infosec info-comment" id="info-comment">
|
||
<h3 id="CloneNames">
|
||
<a class="jig-ncbitoggler-open">Clone Names</a>
|
||
</h3>
|
||
<ul class="geneinfo-subsec">
|
||
<li>MGC9105, KIAA0723, DKFZp686K0542, DKFZp686K23100 </li>
|
||
</ul>
|
||
</div>
|
||
|
||
<div class="gene-ontology infosec">
|
||
<h3 id="gene-ontology">
|
||
<a class="jig-ncbitoggler-open">
|
||
<span>Gene Ontology</span>
|
||
</a>
|
||
<a target="_blank" href="http://www.ebi.ac.uk/GOA" class="g-ontology-src" title="Provided by GOA">Provided by GOA</a>
|
||
</h3>
|
||
<div class="ontology-tables">
|
||
<div class="ui-ncbigrid-outer-div">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table class="jig-ncbigrid" data-jigconfig="isPageable: true, pageSize : 25, isSortable: true, columnTypes: ['str', 'str', 'str']">
|
||
<thead>
|
||
<tr>
|
||
<th class="col1">Function</th>
|
||
<th style="width:12%;">Evidence Code</th>
|
||
<th style="width:10%;">Pubs</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0003723">enables RNA binding</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-1-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> HDA</a>
|
||
<div id="evidence-code-1-0" class="ecode">
|
||
<br />
|
||
<a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a>
|
||
</div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"><a href="/pubmed/22658674,22681889" target="_blank" title="PubMed ID 22658674,22681889" ref="ordinalpos=1&ncbi_uid=9782&link_uid=22658674,22681889">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0003723">enables RNA binding</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-2-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IBA</a>
|
||
<div id="evidence-code-2-0" class="ecode">Inferred from Biological aspect of Ancestor<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0042802">enables identical protein binding</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-3-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IPI</a>
|
||
<div id="evidence-code-3-0" class="ecode">Inferred from Physical Interaction<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"><a href="/pubmed/25416956,32296183" target="_blank" title="PubMed ID 25416956,32296183" ref="ordinalpos=1&ncbi_uid=9782&link_uid=25416956,32296183">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0035198">enables miRNA binding</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-4-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IDA</a>
|
||
<div id="evidence-code-4-0" class="ecode">Inferred from Direct Assay<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"><a href="/pubmed/28431233" target="_blank" title="PubMed ID 28431233" ref="ordinalpos=1&ncbi_uid=9782&link_uid=28431233">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0005515">enables protein binding</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-5-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IPI</a>
|
||
<div id="evidence-code-5-0" class="ecode">Inferred from Physical Interaction<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"><a href="/pubmed/16189514,17043677,17932509,19486527,20195357,25416956,25959826,26496610,26979993,27731383,29961565,30021884,31413325,32296183,32814053,37548402" target="_blank" title="PubMed ID 16189514,17043677,17932509,19486527,20195357,25416956,25959826,26496610,26979993,27731383,29961565,30021884,31413325,32296183,32814053,37548402" ref="ordinalpos=1&ncbi_uid=9782&link_uid=16189514,17043677,17932509,19486527,20195357,25416956,25959826,26496610,26979993,27731383,29961565,30021884,31413325,32296183,32814053,37548402">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0005198">enables structural molecule activity</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-6-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> TAS</a>
|
||
<div id="evidence-code-6-0" class="ecode">Traceable Author Statement<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"><a href="/pubmed/2033075" target="_blank" title="PubMed ID 2033075" ref="ordinalpos=1&ncbi_uid=9782&link_uid=2033075">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-func">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0008270">enables zinc ion binding</a>
|
||
</td>
|
||
<td headers="ont-evi- ont-evi-code-">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-7-0', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IEA</a>
|
||
<div id="evidence-code-7-0" class="ecode">Inferred from Electronic Annotation<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi- ont-pub-"> </td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
<div class="ui-ncbigrid-outer-div">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table class="jig-ncbigrid" data-jigconfig="isPageable: true, pageSize : 25, isSortable: true, columnTypes: ['str', 'str', 'str']">
|
||
<thead>
|
||
<tr>
|
||
<th class="col1">Process</th>
|
||
<th style="width:12%;">Evidence Code</th>
|
||
<th style="width:10%;">Pubs</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td headers="ont-comp">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0002218">involved_in activation of innate immune response</a>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-evi-code-2">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-1-1', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IDA</a>
|
||
<div id="evidence-code-1-1" class="ecode">Inferred from Direct Assay<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-pub-2"><a href="/pubmed/28712728" target="_blank" title="PubMed ID 28712728" ref="ordinalpos=1&ncbi_uid=9782&link_uid=28712728">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-comp">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0001825">involved_in blastocyst formation</a>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-evi-code-2">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-2-1', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IEA</a>
|
||
<div id="evidence-code-2-1" class="ecode">Inferred from Electronic Annotation<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-pub-2"> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-comp">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0003170">acts_upstream_of_or_within heart valve development</a>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-evi-code-2">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-3-1', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> ISS</a>
|
||
<div id="evidence-code-3-1" class="ecode">Inferred from Sequence or Structural Similarity<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-pub-2"> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-comp">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0045087">involved_in innate immune response</a>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-evi-code-2">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-4-1', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IEA</a>
|
||
<div id="evidence-code-4-1" class="ecode">Inferred from Electronic Annotation<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-pub-2"> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-comp">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0010608">involved_in post-transcriptional regulation of gene expression</a>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-evi-code-2">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-5-1', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IDA</a>
|
||
<div id="evidence-code-5-1" class="ecode">Inferred from Direct Assay<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-pub-2"><a href="/pubmed/21771347" target="_blank" title="PubMed ID 21771347" ref="ordinalpos=1&ncbi_uid=9782&link_uid=21771347">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-comp">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0003281">acts_upstream_of_or_within ventricular septum development</a>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-evi-code-2">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-6-1', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> ISS</a>
|
||
<div id="evidence-code-6-1" class="ecode">Inferred from Sequence or Structural Similarity<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-2 ont-pub-2"> </td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
<div class="ui-ncbigrid-outer-div">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table class="jig-ncbigrid" data-config="isPageable: true, pageSize : 25, isSortable: true, columnTypes: ['str', 'str', 'str']">
|
||
<thead>
|
||
<tr>
|
||
<th class="col1">Component</th>
|
||
<th style="width:12%;">Evidence Code</th>
|
||
<th style="width:10%;">Pubs</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td headers="ont-proc">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0016020">located_in membrane</a>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-evi-code-3">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-1-2', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> HDA</a>
|
||
<div id="evidence-code-1-2" class="ecode">
|
||
<br />
|
||
<a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a>
|
||
</div>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-pub-3"><a href="/pubmed/19946888" target="_blank" title="PubMed ID 19946888" ref="ordinalpos=1&ncbi_uid=9782&link_uid=19946888">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-proc">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0005637">located_in nuclear inner membrane</a>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-evi-code-3">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-2-2', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> TAS</a>
|
||
<div id="evidence-code-2-2" class="ecode">Traceable Author Statement<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-pub-3"><a href="/pubmed/2033075" target="_blank" title="PubMed ID 2033075" ref="ordinalpos=1&ncbi_uid=9782&link_uid=2033075">PubMed</a> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-proc">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0016363">located_in nuclear matrix</a>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-evi-code-3">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-3-2', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IEA</a>
|
||
<div id="evidence-code-3-2" class="ecode">Inferred from Electronic Annotation<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-pub-3"> </td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="ont-proc">
|
||
<a href="http://amigo.geneontology.org/amigo/term/GO:0005634">is_active_in nucleus</a>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-evi-code-3">
|
||
<a class="jig-ncbipopper" href="http://geneontology.org/docs/guide-go-evidence-codes/" data-jigconfig="destSelector: '#evidence-code-4-2', hasArrow: true, openAnimation: 'none', closeAnimation: 'none', adjustFit: 'autoAdjust', triggerPosition: 'center right', destPosition: 'center left'"> IBA</a>
|
||
<div id="evidence-code-4-2" class="ecode">Inferred from Biological aspect of Ancestor<br /><a href="http://geneontology.org/docs/guide-go-evidence-codes/">more info</a></div>
|
||
</td>
|
||
<td headers="ont-evi-3 ont-pub-3"> </td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-general-protein-info">
|
||
<section class="rprt-section-header" id="general-protein-info">
|
||
<h2 id="header-general-protein-info">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-general-protein-info .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">General protein information</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.General_Protein_Information" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<dl>
|
||
<dt>Preferred Names</dt>
|
||
<dd>matrin-3</dd>
|
||
</dl>
|
||
<dl>
|
||
<dt>Names</dt>
|
||
<dd>vocal cord and pharyngeal weakness with distal myopathy</dd>
|
||
</dl>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-reference-sequences">
|
||
<section class="rprt-section-header" id="reference-sequences">
|
||
<h2 id="header-reference-sequences">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-reference-sequences .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">NCBI Reference Sequences (RefSeq)</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.NCBI_Reference_Sequences_RefS" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<p>
|
||
<span class="new-icon">NEW</span>
|
||
<strong>Try the new <a href="/datasets/tables/genes/?table_type=transcripts&ids=9782&utm_source=gene&utm_medium=referral&utm_campaign=refseq" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report." data-ga-category="refseq" data-ga-action="click_datasets_link" data-ga-label="transcript_table">Transcript table</a></strong>
|
||
</p>
|
||
<h3 class="genomerefseqs gene_std_toggler" id="refseqset-independent">
|
||
<a class="jig-ncbitoggler-open">RefSeqs maintained independently of Annotated
|
||
Genomes</a>
|
||
</h3>
|
||
<div class="genomerefseqs_slave">
|
||
<p class="desc"> These reference sequences exist independently of genome builds. <a href="#refseq-expl" id="expl-refseg">Explain</a></p>
|
||
<p id="refseq-expl"> These reference sequences are curated independently of the genome
|
||
annotation cycle, so their versions may not match the RefSeq versions in the current
|
||
genome build. Identify version mismatches by comparing the version of the RefSeq in
|
||
this section to the one reported in <a href="#geneGenomic regions, transcripts, and products">Genomic regions,
|
||
transcripts, and products</a> above. </p>
|
||
<h4 id="genomic-p159504240">Genomic </h4>
|
||
<ol>
|
||
<li>
|
||
<p>NG_012846.1 RefSeqGene</p>
|
||
<dl>
|
||
<dt>Range</dt>
|
||
<dd class="rs-range">
|
||
<span>24638..62575</span>
|
||
</dd>
|
||
<dt>Download</dt>
|
||
<dd><a href="/nuccore/NG_012846.1?from=24638&to=62575&report=genbank" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NG_012846.1?from=24638&to=62575&report=genbank">GenBank</a>, <a href="/nuccore/NG_012846.1?from=24638&to=62575&report=fasta" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NG_012846.1?from=24638&to=62575&report=fasta">FASTA</a>, <a href="/nuccore/NG_012846.1?from=18946&to=68265&report=graph&content=5" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NG_012846.1?from=18946&to=68265&report=graph&content=5">Sequence Viewer (Graphics)</a></dd>
|
||
</dl>
|
||
</li>
|
||
</ol>
|
||
<h4 id="mrnaandproteins-p162352016">mRNA and Protein(s) </h4>
|
||
<ol>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001194954.2">NM_001194954.2</a> → <a href="/protein/NP_001181883.1">NP_001181883.1</a> matrin-3 isoform a</p>
|
||
<p>
|
||
<a href="/ipg/NP_001181883.1/" ref="ncbi_uid=9782">See identical proteins and their annotated locations for NP_001181883.1</a>
|
||
</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Description</dt>
|
||
<dd>Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1-4 encode the same isoform (a).</dd>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AA233906, AB018266, AC011404, AK307872, BX537365">AA233906, AB018266, AC011404, AK307872, BX537365</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
<dt class="clear"> Conserved Domains (3) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_001181883.1">summary</a></dt>
|
||
<dd>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=197732">smart00451</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">798</span> → <span class="cddto">833</span></dt>
|
||
<dd class="clearfix"> ZnF_U1; U1-like zinc finger</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241158">cd12714</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">398</span> → <span class="cddto">473</span></dt>
|
||
<dd class="clearfix"> RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241159">cd12715</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">496</span> → <span class="cddto">575</span></dt>
|
||
<dd class="clearfix"> RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001194955.2">NM_001194955.2</a> → <a href="/protein/NP_001181884.1">NP_001181884.1</a> matrin-3 isoform a</p>
|
||
<p>
|
||
<a href="/ipg/NP_001181884.1/" ref="ncbi_uid=9782">See identical proteins and their annotated locations for NP_001181884.1</a>
|
||
</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Description</dt>
|
||
<dd>Transcript Variant: This variant (4) differs in the 5' UTR, compared to variant 1. Variants 1-4 encode the same isoform (a).</dd>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AA233906, AB018266, AC011404, AK316420, BX537365">AA233906, AB018266, AC011404, AK316420, BX537365</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
<dt>Related</dt>
|
||
<dd><a href="http://www.ensembl.org/id/ENSP00000482895.1" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENSP00000482895.1</a>, <a href="http://www.ensembl.org/id/ENST00000618441.5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENST00000618441.5</a></dd>
|
||
<dt class="clear"> Conserved Domains (3) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_001181884.1">summary</a></dt>
|
||
<dd>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=197732">smart00451</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">798</span> → <span class="cddto">833</span></dt>
|
||
<dd class="clearfix"> ZnF_U1; U1-like zinc finger</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241158">cd12714</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">398</span> → <span class="cddto">473</span></dt>
|
||
<dd class="clearfix"> RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241159">cd12715</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">496</span> → <span class="cddto">575</span></dt>
|
||
<dd class="clearfix"> RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001194956.2">NM_001194956.2</a> → <a href="/protein/NP_001181885.1">NP_001181885.1</a> matrin-3 isoform b</p>
|
||
<p>
|
||
<a href="/ipg/NP_001181885.1/" ref="ncbi_uid=9782">See identical proteins and their annotated locations for NP_001181885.1</a>
|
||
</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Description</dt>
|
||
<dd>Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (b) has a distinct N-terminus and is shorter than isoform a.</dd>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AA233906, AC011404, AK316420, BX537365">AA233906, AC011404, AK316420, BX537365</a>
|
||
</dd>
|
||
<dt>Consensus CDS</dt>
|
||
<dd>
|
||
<a href="/CCDS/CcdsBrowse.cgi?REQUEST=CCDS&GO=MainBrowse&DATA=CCDS54908.1">CCDS54908.1</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd>
|
||
<a href="https://www.uniprot.org/uniprot/B4DRS1" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DRS1</a>
|
||
</dd>
|
||
<dt>Related</dt>
|
||
<dd><a href="http://www.ensembl.org/id/ENSP00000423587.1" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENSP00000423587.1</a>, <a href="http://www.ensembl.org/id/ENST00000503811.5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENST00000503811.5</a></dd>
|
||
<dt class="clear"> Conserved Domains (3) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_001181885.1">summary</a></dt>
|
||
<dd>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=197732">smart00451</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">510</span> → <span class="cddto">545</span></dt>
|
||
<dd class="clearfix"> ZnF_U1; U1-like zinc finger</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241158">cd12714</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">110</span> → <span class="cddto">185</span></dt>
|
||
<dd class="clearfix"> RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241159">cd12715</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">208</span> → <span class="cddto">287</span></dt>
|
||
<dd class="clearfix"> RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001282278.2">NM_001282278.2</a> → <a href="/protein/NP_001269207.1">NP_001269207.1</a> matrin-3 isoform c</p>
|
||
<p>
|
||
<a href="/ipg/NP_001269207.1/" ref="ncbi_uid=9782">See identical proteins and their annotated locations for NP_001269207.1</a>
|
||
</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Description</dt>
|
||
<dd>Transcript Variant: This variant (6) lacks an exon which contains a portion of the 5' UTR and 5' coding region including the start codon, compared to variant 1. These differences cause translation initiation at a downstream start codon and result in an isoform (c) with a shorter N-terminus, compared to isoform a.</dd>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AA233906, AB018266, AC011404, AK293952, AK307872, BX537365">AA233906, AB018266, AC011404, AK293952, AK307872, BX537365</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
<dt class="clear"> Conserved Domains (3) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_001269207.1">summary</a></dt>
|
||
<dd>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=197732">smart00451</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">460</span> → <span class="cddto">495</span></dt>
|
||
<dd class="clearfix"> ZnF_U1; U1-like zinc finger</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241158">cd12714</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">60</span> → <span class="cddto">135</span></dt>
|
||
<dd class="clearfix"> RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241159">cd12715</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">158</span> → <span class="cddto">237</span></dt>
|
||
<dd class="clearfix"> RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400441.1">NM_001400441.1</a> → <a href="/protein/NP_001387370.1">NP_001387370.1</a> matrin-3 isoform d</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A8MXP9" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A8MXP9</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400442.1">NM_001400442.1</a> → <a href="/protein/NP_001387371.1">NP_001387371.1</a> matrin-3 isoform d</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A8MXP9" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A8MXP9</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400443.1">NM_001400443.1</a> → <a href="/protein/NP_001387372.1">NP_001387372.1</a> matrin-3 isoform d</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A8MXP9" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A8MXP9</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400444.1">NM_001400444.1</a> → <a href="/protein/NP_001387373.1">NP_001387373.1</a> matrin-3 isoform d</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A8MXP9" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A8MXP9</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400445.1">NM_001400445.1</a> → <a href="/protein/NP_001387374.1">NP_001387374.1</a> matrin-3 isoform d</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>Consensus CDS</dt>
|
||
<dd>
|
||
<a href="/CCDS/CcdsBrowse.cgi?REQUEST=CCDS&GO=MainBrowse&DATA=CCDS93789.1">CCDS93789.1</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A8MXP9" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A8MXP9</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400447.1">NM_001400447.1</a> → <a href="/protein/NP_001387376.1">NP_001387376.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400448.1">NM_001400448.1</a> → <a href="/protein/NP_001387377.1">NP_001387377.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400450.1">NM_001400450.1</a> → <a href="/protein/NP_001387379.1">NP_001387379.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400451.1">NM_001400451.1</a> → <a href="/protein/NP_001387380.1">NP_001387380.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400452.1">NM_001400452.1</a> → <a href="/protein/NP_001387381.1">NP_001387381.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400453.1">NM_001400453.1</a> → <a href="/protein/NP_001387382.1">NP_001387382.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400454.1">NM_001400454.1</a> → <a href="/protein/NP_001387383.1">NP_001387383.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400455.1">NM_001400455.1</a> → <a href="/protein/NP_001387384.1">NP_001387384.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400456.1">NM_001400456.1</a> → <a href="/protein/NP_001387385.1">NP_001387385.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400457.1">NM_001400457.1</a> → <a href="/protein/NP_001387386.1">NP_001387386.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400458.1">NM_001400458.1</a> → <a href="/protein/NP_001387387.1">NP_001387387.1</a> matrin-3 isoform a</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400459.1">NM_001400459.1</a> → <a href="/protein/NP_001387388.1">NP_001387388.1</a> matrin-3 isoform e</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd>
|
||
<a href="https://www.uniprot.org/uniprot/B4DRS1" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DRS1</a>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400460.1">NM_001400460.1</a> → <a href="/protein/NP_001387389.1">NP_001387389.1</a> matrin-3 isoform f</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd>
|
||
<a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400461.1">NM_001400461.1</a> → <a href="/protein/NP_001387390.1">NP_001387390.1</a> matrin-3 isoform g</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd>
|
||
<a href="https://www.uniprot.org/uniprot/B4DRS1" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DRS1</a>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400462.1">NM_001400462.1</a> → <a href="/protein/NP_001387391.1">NP_001387391.1</a> matrin-3 isoform c</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400463.1">NM_001400463.1</a> → <a href="/protein/NP_001387392.1">NP_001387392.1</a> matrin-3 isoform c</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400464.1">NM_001400464.1</a> → <a href="/protein/NP_001387393.1">NP_001387393.1</a> matrin-3 isoform c</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400465.1">NM_001400465.1</a> → <a href="/protein/NP_001387394.1">NP_001387394.1</a> matrin-3 isoform c</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400466.1">NM_001400466.1</a> → <a href="/protein/NP_001387395.1">NP_001387395.1</a> matrin-3 isoform c</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_001400467.1">NM_001400467.1</a> → <a href="/protein/NP_001387396.1">NP_001387396.1</a> matrin-3 isoform c</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AC011404">AC011404</a>
|
||
</dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B3KM87" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B3KM87</a>, <a href="https://www.uniprot.org/uniprot/B4DF66" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B4DF66</a>, <a href="https://www.uniprot.org/uniprot/Q5CZA7" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q5CZA7</a></dd>
|
||
<dt>Related</dt>
|
||
<dd><a href="http://www.ensembl.org/id/ENSP00000426030.1" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENSP00000426030.1</a>, <a href="http://www.ensembl.org/id/ENST00000502499.5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENST00000502499.5</a></dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_018834.6">NM_018834.6</a> → <a href="/protein/NP_061322.2">NP_061322.2</a> matrin-3 isoform a</p>
|
||
<p>
|
||
<a href="/ipg/NP_061322.2/" ref="ncbi_uid=9782">See identical proteins and their annotated locations for NP_061322.2</a>
|
||
</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Description</dt>
|
||
<dd>Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1-4 encode the same isoform (a).</dd>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AA233906, AC011404, AY007157, BX537365">AA233906, AC011404, AY007157, BX537365</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
<dt>Related</dt>
|
||
<dd><a href="http://www.ensembl.org/id/ENSP00000378284.3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENSP00000378284.3</a>, <a href="http://www.ensembl.org/id/ENST00000394805.8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">ENST00000394805.8</a></dd>
|
||
<dt class="clear"> Conserved Domains (3) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_061322.2">summary</a></dt>
|
||
<dd>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=197732">smart00451</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">798</span> → <span class="cddto">833</span></dt>
|
||
<dd class="clearfix"> ZnF_U1; U1-like zinc finger</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241158">cd12714</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">398</span> → <span class="cddto">473</span></dt>
|
||
<dd class="clearfix"> RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241159">cd12715</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">496</span> → <span class="cddto">575</span></dt>
|
||
<dd class="clearfix"> RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/NM_199189.3">NM_199189.3</a> → <a href="/protein/NP_954659.1">NP_954659.1</a> matrin-3 isoform a</p>
|
||
<p>
|
||
<a href="/ipg/NP_954659.1/" ref="ncbi_uid=9782">See identical proteins and their annotated locations for NP_954659.1</a>
|
||
</p>
|
||
<p style="background:#fff; margin-top:1em;">Status: REVIEWED</p>
|
||
<dl>
|
||
<dt>Description</dt>
|
||
<dd>Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a). Variants 1-4 encode the same isoform (a).</dd>
|
||
<dt>Source sequence(s)</dt>
|
||
<dd class="wordwrap">
|
||
<a href="/nuccore/AA233906, AB018266, AC011404, AK307872, BX537365">AA233906, AB018266, AC011404, AK307872, BX537365</a>
|
||
</dd>
|
||
<dt>UniProtKB/Swiss-Prot</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/B7ZAV5" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">B7ZAV5</a>, <a href="https://www.uniprot.org/uniprot/D3DQC3" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">D3DQC3</a>, <a href="https://www.uniprot.org/uniprot/P43243" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">P43243</a>, <a href="https://www.uniprot.org/uniprot/Q9UHW0" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UHW0</a>, <a href="https://www.uniprot.org/uniprot/Q9UQ27" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q9UQ27</a></dd>
|
||
<dt>UniProtKB/TrEMBL</dt>
|
||
<dd><a href="https://www.uniprot.org/uniprot/A0A0R4J2E8" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">A0A0R4J2E8</a>, <a href="https://www.uniprot.org/uniprot/Q68D11" ref="itool=Gene_FullReport&PrId=5380&uid=9782&nlmid=&db=gene">Q68D11</a></dd>
|
||
<dt class="clear"> Conserved Domains (3) <a href="/Structure/cdd/wrpsb.cgi?seqinput=NP_954659.1">summary</a></dt>
|
||
<dd>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=197732">smart00451</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">798</span> → <span class="cddto">833</span></dt>
|
||
<dd class="clearfix"> ZnF_U1; U1-like zinc finger</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241158">cd12714</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">398</span> → <span class="cddto">473</span></dt>
|
||
<dd class="clearfix"> RRM1_MATR3; RNA recognition motif 1 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
<dl class="level2">
|
||
<dt><a href="/Structure/cdd/cddsrv.cgi?uid=241159">cd12715</a><br /><span class="cddlocation">Location:</span><span class="cddfrom">496</span> → <span class="cddto">575</span></dt>
|
||
<dd class="clearfix"> RRM2_MATR3; RNA recognition motif 2 in vertebrate matrin-3</dd>
|
||
</dl>
|
||
</dd>
|
||
</dl>
|
||
</li>
|
||
</ol>
|
||
</div>
|
||
<h3 class="genomerefseqs gene_std_toggler" id="annotatedrefseq-title">
|
||
<a class="jig-ncbitoggler-open">RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08</a>
|
||
</h3>
|
||
<div class="genomerefseqs_slave">
|
||
<p class="desc"> The following sections contain reference sequences that belong to a
|
||
specific genome build. <a href="#" id="expl-genomes">Explain</a></p>
|
||
<p id="expl-genomes-desc" style="display:none">This section includes genomic Reference
|
||
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
|
||
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
|
||
assemblies. Model RNAs and proteins are also reported here.</p>
|
||
<h3 id="refseq-sequencedescription-p118846928">Reference GRCh38.p14 Primary Assembly</h3>
|
||
<h4 id="genomic-p118846928">Genomic </h4>
|
||
<ol>
|
||
<li>
|
||
<p>NC_000005.10 Reference GRCh38.p14 Primary Assembly</p>
|
||
<dl>
|
||
<dt>Range</dt>
|
||
<dd class="rs-range">
|
||
<span>139274101..139331677</span>
|
||
</dd>
|
||
<dt>Download</dt>
|
||
<dd><a href="/nuccore/NC_000005.10?from=139274101&to=139331677&report=genbank" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_000005.10?from=139274101&to=139331677&report=genbank">GenBank</a>, <a href="/nuccore/NC_000005.10?from=139274101&to=139331677&report=fasta" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_000005.10?from=139274101&to=139331677&report=fasta">FASTA</a>, <a href="/nuccore/NC_000005.10?from=139265464&to=139340312&report=graph&content=5" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_000005.10?from=139265464&to=139340312&report=graph&content=5">Sequence Viewer (Graphics)</a></dd>
|
||
</dl>
|
||
</li>
|
||
</ol>
|
||
<h3 id="refseq-sequencedescription-p119499104">Alternate T2T-CHM13v2.0</h3>
|
||
<h4 id="genomic-p119499104">Genomic </h4>
|
||
<ol>
|
||
<li>
|
||
<p>NC_060929.1 Alternate T2T-CHM13v2.0</p>
|
||
<dl>
|
||
<dt>Range</dt>
|
||
<dd class="rs-range">
|
||
<span>139800176..139857743</span>
|
||
</dd>
|
||
<dt>Download</dt>
|
||
<dd><a href="/nuccore/NC_060929.1?from=139800176&to=139857743&report=genbank" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_060929.1?from=139800176&to=139857743&report=genbank">GenBank</a>, <a href="/nuccore/NC_060929.1?from=139800176&to=139857743&report=fasta" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_060929.1?from=139800176&to=139857743&report=fasta">FASTA</a>, <a href="/nuccore/NC_060929.1?from=139791540&to=139866377&report=graph&content=5" ref="ordinalpos=1&ncbi_uid=9782&link_uid=NC_060929.1?from=139791540&to=139866377&report=graph&content=5">Sequence Viewer (Graphics)</a></dd>
|
||
</dl>
|
||
</li>
|
||
</ol>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-related-sequences">
|
||
<section class="rprt-section-header" id="related-sequences">
|
||
<h2 id="header-related-sequences">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-related-sequences .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Related sequences</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Related_Sequences" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div>
|
||
<table id="proteinTblId" class="jig-ncbiservergrid" data-jigconfig="webservice:'/gene/9782/data/related-sequences/',webserviceParams: 'p$l=Ajax', isServersideLoad:true, isServersidePaging: true,isServersidePagingCached: true,pageSize:25">
|
||
<thead>
|
||
<tr>
|
||
<th colspan="2" id="rs-nucleo">Nucleotide</th>
|
||
<th rowspan="2" id="rs-protein">Protein</th>
|
||
</tr>
|
||
<tr>
|
||
<th id="rs-heading">Heading</th>
|
||
<th id="rs-heading-acc">Accession and Version</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody></tbody>
|
||
</table>
|
||
<table id="proteinTblId" class="jig-ncbigrid" data-jigconfig="isPageable:true, pageSize:25">
|
||
<thead>
|
||
<tr>
|
||
<th class="proteinTblTh" rowspan="2" id="rs-prot-acc">Protein Accession</th>
|
||
<th class="proteinTblTh" colspan="2" id="rs-link">Links</th>
|
||
</tr>
|
||
<tr>
|
||
<th id="rs-genepept">GenPept Link</th>
|
||
<th id="rs-uniprot">UniProtKB Link</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td headers="rs-prot-acc">P43243.2</td>
|
||
<td headers="rs-link rs-genepept">
|
||
<a href="/protein/12643409" ref="ordinalpos=1&ncbi_uid=9782&link_uid=12643409">GenPept</a>
|
||
</td>
|
||
<td>
|
||
<a href="https://www.uniprot.org/uniprot/P43243">UniProtKB/Swiss-Prot:P43243</a>
|
||
</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-additional-links">
|
||
|
||
<section class="rprt-section-header" id="additional-links"><h2 id="header-additional-links"><a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-additional-links .rprt-section-body'"><span class="ui-ncbitoggler-master-text">Additional links</span></a></h2><div class="rprt-section-tools"><a href="#top" title="Go to the top of the page" class="gene-top-page"><span>Go to the top of the page</span></a><a href="/books/NBK3841/#EntrezGene.Additional_Links" title="Help" class="gene-section-help"><span>Help</span></a></div></section>
|
||
|
||
<div class="rprt-section-body" style="">
|
||
<div id="lsdb"><h3 class="withnote" id="locusspecificdatabases"><a class="jig-ncbitoggler-open">Locus-specific Databases</a></h3><div><ul class="locusdb"><li><a href="https://databases.lovd.nl/shared/genes/MATR3" ref="from_uid=9782" class="lsdblink">MATR3 homepage - Leiden Muscular Dystrophy pages</a></li></ul></div></div>
|
||
|
||
<h3 class="withnote" id="genelinkout">
|
||
<a class="jig-ncbitoggler">Gene LinkOut</a>
|
||
</h3><div>
|
||
<p>The following <a href="https://www.ncbi.nlm.nih.gov/projects/linkout/index.html">LinkOut</a> resources are supplied by external providers. These providers are responsible for maintaining the links. </p>
|
||
<div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Chemical Information</span>
|
||
</a>
|
||
<ul>
|
||
<li><span class="free-rsc"></span>Interologous Interaction Database</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://ophid.utoronto.ca/redirect/ncbi/human?proteins=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7911">
|
||
<span>Interologous Interaction Database</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>MilliporeSigma</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.sigmaaldrich.com/catalog/genes/MATR3?lang=en&region=US" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=9978">
|
||
<span>Matr3 products</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Medical</span>
|
||
</a>
|
||
<ul>
|
||
<li><span class="free-rsc"></span>MedlinePlus Health Information</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://medlineplus.gov/genetics/gene/matr3" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=3162">
|
||
<span>MATR3 gene</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Molecular Biology Databases</span>
|
||
</a>
|
||
<ul>
|
||
<li><span class="free-rsc"></span>Bgee database</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.bgee.org/gene/ENSG00000015479" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=10418">
|
||
<span>MATR3 gene expression</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>BioGPS</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://biogps.org/gene/9782/" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=5059">
|
||
<span>BioGPS</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>BioGRID Open Repository of CRISPR Screens (ORCS)</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://orcs.thebiogrid.org/Gene/9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=10164">
|
||
<span>BioGRID CRISPR Screen Phenotypes (165 hits/1395 screens)</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>CTD: Comparative Toxicogenomics Database</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://ctdbase.org/detail.go?type=gene&acc=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7845">
|
||
<span>CTD: Comparative Toxicogenomics Database - MATR3</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>Domain Mapping of Disease Mutations</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://bioinf.umbc.edu/DMDM/gene_prot_page.php?id=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7642">
|
||
<span>MATR3</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>GlyGen glycoinformatics resource</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://glygen.org/protein/P43243" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=10227">
|
||
<span>GlyGen glycoinformatics resource</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>Human eFP Browser</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://bar.utoronto.ca/efp_human/cgi-bin/efpWeb.cgi?dataSource=Circulatory_Respiratory&modeInput=Absolute&primaryGene=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8875">
|
||
<span>Human eFP Browser</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="http://bar.utoronto.ca/efp_human/cgi-bin/efpWeb.cgi?dataSource=Nervous&modeInput=Absolute&primaryGene=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8875">
|
||
<span>Human eFP Browser</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="http://bar.utoronto.ca/efp_human/cgi-bin/efpWeb.cgi?dataSource=Reproductive&modeInput=Absolute&primaryGene=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8875">
|
||
<span>Human eFP Browser</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li>Ingenuity Pathways Analysis</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://partnersolution.ingenuity.com/?cid=97ae3f91eab87a&p1=Entrez&p2=GV&s=&ipaUri=%2Fpa%2Fapi%2Fv2%2Fgeneview%3Fapplicationname%3DEntrez%26geneId%3D9782%26geneidtype%3Dentrezgene" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=5628">
|
||
<span>Ingenuity Pathways Analysis</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>InnateDB</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://www.innatedb.com/getGeneCard.do?id=47535" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7894">
|
||
<span>InnateDB</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>Kyoto Encyclopedia of Genes and Genomes</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://www.genome.jp/dbget-bin/www_bget?hsa:9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=5174">
|
||
<span>Kyoto Encyclopedia of Genes and Genomes</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>OMA Browser: Orthologous MAtrix</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://omabrowser.org/oma/info/HUMAN81053/" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=9822">
|
||
<span>OMA Browser: Orthologous MAtrix</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://omabrowser.org/oma/info/HUMAN81072/" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=9822">
|
||
<span>OMA Browser: Orthologous MAtrix</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://omabrowser.org/oma/info/HUMAN81059/" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=9822">
|
||
<span>OMA Browser: Orthologous MAtrix</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>OrthoDB catalog of orthologs</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.orthodb.org/?ncbi=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8178">
|
||
<span>Orthologs</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>PhosphoSitePlus</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.phosphosite.org/entrezGeneIdAction.action?id=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7987">
|
||
<span>PhosphoSitePlus® - comprehensive post-translational modification resource</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>The Gene Wiki</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://en.wikipedia.org/wiki/MATR3" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=6933">
|
||
<span>The Gene Wiki</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="free-rsc"></span>The Weizmann Institute of Science GeneCards and MalaCards databases</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.genecards.org/cgi-bin/carddisp.pl?gene=MATR3" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8598">
|
||
<span>GeneCard for MATR3</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Research Materials</span>
|
||
</a>
|
||
<ul>
|
||
<li><span class="order-rsc"></span>Addgene Non-profit plasmid repository</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://addgene.org//browse/gene/9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=5304">
|
||
<span>Get Plasmids - Addgene</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>Bio-Techne</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.bio-techne.com/t/matrin-3/antibodies?utm_source=linkout&utm_medium=referral&utm_campaign=product&utm_term=antibodies" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8242">
|
||
<span>Matrin 3 Antibodies</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://www.bio-techne.com/t/matrin-3/proteins-enzymes?utm_source=linkout&utm_medium=referral&utm_campaign=product&utm_term=proteins" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8242">
|
||
<span>Matrin 3 Proteins</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://www.bio-techne.com/t/matrin-3/lysates?utm_source=linkout&utm_medium=referral&utm_campaign=product&utm_term=lysates" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8242">
|
||
<span>Matrin 3 Lysates</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>Creative Biogene</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.creative-biogene.com/genesearch/Matr3.html" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=10094">
|
||
<span>matrin 3</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li>ExactAntigen/Labome</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.labome.com/gene/human/MATR3-antibody.html" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=5753">
|
||
<span>reagents</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://www.labome.com/review/gene/human/MATR3-antibody.html" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=5753">
|
||
<span>reagent review</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>GenScript latest version of gene cDNA ORF Clone</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://www.genscript.com/gene/9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8012">
|
||
<span>GenScript latest version of gene cDNA ORF Clone</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>GeneCopoeia Inc.</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.genecopoeia.com/product/search/result.php?prt=11&field=5&key=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7255">
|
||
<span>Order shRNA clones</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://www.genecopoeia.com/product/search/result.php?prt=22&field=5&key=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7255">
|
||
<span>Order promoter clone</span>
|
||
</a>
|
||
</li>
|
||
<li>
|
||
<a target="_blank" href="https://www.genecopoeia.com/product/search/result.php?prt=1&field=5&key=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7255">
|
||
<span>Order full-length ORF clone</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>GeneTex Inc</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.genetex.com/Product/Search?geneid=9782&type=01&page=1" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=8117">
|
||
<span>Find Quality Antibodies</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>Kazusa DNA Research Institute</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://www.kazusa.or.jp/kop/dsearch/symsearch.cgi?keyword=MATR3;" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=3267">
|
||
<span>Kazusa DNA Research Institute</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
<li><span class="order-rsc"></span>OriGene</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="https://www.origene.com/search?q=MATR3" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7994">
|
||
<span>Order MATR3 cDNA clone/Protein/Antibody/RNAi</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Tools</span>
|
||
</a>
|
||
<ul>
|
||
<li><span class="free-rsc"></span>GeneMANIA</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://genemania.org/link?o=9606&g=9782" ref="itool=Gene_FullReport&uid=9782&nlmid=&db=gene&log$=linkoutlink&PrId=7529">
|
||
<span>GeneMANIA</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div id="urls-in-genombrowser" style="display:none">
|
||
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div><input type="hidden" class="section_status_input" name="status_checked" id="status_checked" value="" /><input type="hidden" class="section_status_input" name="status_open" id="status_open" value="summary,region,context,bibliography,phenotypes,variation,hiv,interactions,pathways,geneInfo,proteinInfo,refSeq,related,links" /><input type="hidden" class="section_status_input" name="status_exist" id="status_exist" value="summary,context,region,expression,bibliography,phenotypes,variation,hiv,interactions,geneInfo,proteinInfo,refSeq,related,links" /><input type="hidden" class="section_status_input" name="status_closed" id="status_closed" value="" /><meta name="status_checked" content="" class="meta_section_status" /><meta name="status_open" content="summary,region,context,bibliography,phenotypes,variation,hiv,interactions,pathways,geneInfo,proteinInfo,refSeq,related,links" class="meta_section_status" /><meta name="status_exist" content="summary,context,region,expression,bibliography,phenotypes,variation,hiv,interactions,geneInfo,proteinInfo,refSeq,related,links" class="meta_section_status" /><meta name="status_closed" content="" class="meta_section_status" /><script type="text/javascript">
|
||
|
||
var section_status_meta = {
|
||
'status_checked': '',
|
||
'status_open': 'summary,region,context,bibliography,phenotypes,variation,hiv,interactions,pathways,geneInfo,proteinInfo,refSeq,related,links',
|
||
'status_exist': 'summary,context,region,expression,bibliography,phenotypes,variation,hiv,interactions,geneInfo,proteinInfo,refSeq,related,links',
|
||
'status_closed': ''
|
||
};
|
||
|
||
|
||
/*
|
||
for (var o in section_status_meta) {
|
||
var meta=document.createElement('meta');
|
||
meta.name = o;
|
||
meta.content = section_status_meta[o];
|
||
var attr = document.createAttribute('data-ignore-limit');
|
||
attr.value = 'true';
|
||
meta.setAttributeNode(attr);
|
||
document.getElementsByTagName('head')[0].appendChild(meta);
|
||
}
|
||
*/
|
||
|
||
|
||
var __ncbi_sg_pingCallbacks_render_gene = function (data, evtObj, type) {
|
||
// data looks like {jsevent: "click", "link_id": "foo", ...}
|
||
// evtObj is the JS event object
|
||
// type is either "stat" (for applog) or "ga"
|
||
var extraData = {};
|
||
if (type == "stat") {
|
||
for (var o in section_status_meta) {
|
||
extraData[o] = section_status_meta[o];
|
||
}
|
||
|
||
return extraData;
|
||
|
||
}
|
||
}
|
||
|
||
|
||
</script></div>
|
||
|
||
</div>
|
||
</div>
|
||
|
||
<div id="messagearea_bottom">
|
||
|
||
</div>
|
||
<div class=" bottom">
|
||
|
||
</div>
|
||
|
||
</div>
|
||
</div>
|
||
<div class="supplemental col three_col last" id="sidebar_tabular">
|
||
<!-- sidebar close/hide button-->
|
||
<div class="ui-helper-clearfix">
|
||
<a href="#" id="sidecontent_2_pullout" style="float:right;" class="sidecontentpullout_local collapse_button"><span>Hide sidebar >></span></a>
|
||
</div>
|
||
<!-- end sidebar close/hide button-->
|
||
|
||
<h2 class="offscreen_noflow">Supplemental Content</h2>
|
||
|
||
<div id="gene-sidebar">
|
||
<div>
|
||
<div class="portlet brieflink dis-table-of-contents">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Table of contents</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_TableOfContents.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_TableOfContents" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_TableOfContents.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li class="">
|
||
<a href="#summary">Summary</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#genomic-context">Genomic context</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#genomic-regions-transcripts-products">Genomic regions, transcripts, and products</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#gene-expression">Expression</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#bibliography">Bibliography</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#phenotypes">Phenotypes</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#variation">Variation</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#HIV-1-interactions">HIV-1 interactions</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#interactions">Interactions</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#general-gene-info">General gene information</a>
|
||
<div class="subsection-links"><a href="#gene-markers">Markers</a>, <a href="#Relatedpseudogenes">Related pseudogene(s)</a>, <a href="#ReadthroughMATR3">Readthrough MATR3</a>, <a href="#CloneNames">Clone Names</a>, <a href="#homology">Homology</a>, <a href="#gene-ontology">Gene Ontology</a></div>
|
||
</li>
|
||
<li class="">
|
||
<a href="#general-protein-info">General protein information</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#reference-sequences">NCBI Reference Sequences (RefSeq)</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#related-sequences">Related sequences</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#additional-links">Additional links</a>
|
||
<div class="subsection-links">
|
||
<a href="#lsdb">Locus-specific Databases</a>
|
||
</div>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-genomesbrowser brieflink dis-genomesbrowser">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Genome Browsers</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GenomeBrowsers.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_GenomeBrowsers" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GenomeBrowsers.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="#">Loading...</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet dis-related-info brieflink">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Related information</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedInformation.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="discovery_db_links" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedInformation.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content DiscoveryDbLinks">
|
||
<ul>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/clone/order/gene/9782" ref="log$=recordlinks">Order cDNA clone</a>
|
||
<div class="brieflinkpop offscreen_noflow">Order cDNA clone</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pcassay?LinkName=gene_pcassay_alltarget_list&from_uid=9782" ref="log$=recordlinks">BioAssay by Target (List)</a>
|
||
<div class="brieflinkpop offscreen_noflow">BioAssays related to the gene by protein target or RNAi target</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="//pubchem.ncbi.nlm.nih.gov/assay/bioactivity.html?geneid=9782" ref="log$=recordlinks">BioAssay by Target (Summary)</a>
|
||
<div class="brieflinkpop offscreen_noflow">Summarized PubChem Data on the gene, showing the active data by default</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pcassay?LinkName=gene_pcassay_target&from_uid=9782" ref="log$=recordlinks">BioAssay, by Gene target</a>
|
||
<div class="brieflinkpop offscreen_noflow">PubChem BioAssays done on the Gene target</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pcassay?LinkName=gene_pcassay_rnai_active&from_uid=9782" ref="log$=recordlinks">BioAssays, RNAi Target, Active</a>
|
||
<div class="brieflinkpop offscreen_noflow">BioAssays that contain the gene as the target of a RNAi reagent, which is identified as a hit in a RNAi screening and flagged as "active" in the corresponding BioAssay record</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pcassay?LinkName=gene_pcassay_rnai&from_uid=9782" ref="log$=recordlinks">BioAssays, RNAi Target, Tested</a>
|
||
<div class="brieflinkpop offscreen_noflow">BioAssays that contain the gene as the target of a RNAi reagent</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/bioproject?LinkName=gene_bioproject&from_uid=9782" ref="log$=recordlinks">BioProjects</a>
|
||
<div class="brieflinkpop offscreen_noflow">BioProjects related to a gene</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/CCDS/CcdsBrowse.cgi?REQUEST=GENEID&DATA=9782" ref="log$=recordlinks">CCDS</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to CCDS</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/clinvar?LinkName=gene_clinvar&from_uid=9782" ref="log$=recordlinks">ClinVar</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related medical variations</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/cdd?LinkName=gene_cdd&from_uid=9782" ref="log$=recordlinks">Conserved Domains</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related CDD</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/dbvar?LinkName=gene_dbvar&from_uid=9782" ref="log$=recordlinks">dbVar</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link from Gene to dbVar</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pmc?LinkName=gene_pmc&from_uid=9782" ref="log$=recordlinks">Full text in PMC</a>
|
||
<div class="brieflinkpop offscreen_noflow">PMC links</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pmc?LinkName=gene_pmc_nucleotide&from_uid=9782" ref="log$=recordlinks">Full text in PMC_nucleotide</a>
|
||
<div class="brieflinkpop offscreen_noflow">Full text in PubMedCentral identified from shared sequence links</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/sparcle?LinkName=gene_sparcle&from_uid=9782" ref="log$=recordlinks">Functional Class</a>
|
||
<div class="brieflinkpop offscreen_noflow">Functional class of the sequence domain architecture</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/gap?LinkName=gene_gap&from_uid=9782" ref="log$=recordlinks">GAP</a>
|
||
<div class="brieflinkpop offscreen_noflow">GAP Links</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/gene?LinkName=gene_gene_neighbors&from_uid=9782" ref="log$=recordlinks">Gene neighbors</a>
|
||
<div class="brieflinkpop offscreen_noflow">Overlapping genes and two nearest non-overlapping genes on either side</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/gene?LinkName=gene_gene_h3k4me3&from_uid=9782" ref="log$=recordlinks">Genes with a similar H3K4me3 profile</a>
|
||
<div class="brieflinkpop offscreen_noflow">Genes with a similar profile of promoter-activating H3K4me3 modifications across several tissue types</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/genome?LinkName=gene_genome&from_uid=9782" ref="log$=recordlinks">Genome</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related Genome</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/geoprofiles?LinkName=gene_geoprofiles&from_uid=9782" ref="log$=recordlinks">GEO Profiles</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related GEO</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/gtr/tests/?term=9782[geneid]" ref="log$=recordlinks">GTR</a>
|
||
<div class="brieflinkpop offscreen_noflow">Tests for this gene in the NIH Genetic Testing Registry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/homologene?LinkName=gene_homologene&from_uid=9782" ref="log$=recordlinks">HomoloGene</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related HomoloGene</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/medgen?LinkName=gene_medgen_diseases&from_uid=9782" ref="log$=recordlinks">MedGen</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related information in MedGen</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/nuccore?LinkName=gene_nuccore&from_uid=9782" ref="log$=recordlinks">Nucleotide</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related Nucleotide entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/omim?LinkName=gene_omim&from_uid=9782" ref="log$=recordlinks">OMIM</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related OMIM entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/probe?LinkName=gene_probe&from_uid=9782" ref="log$=recordlinks">Probe</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related Probe entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/protein?LinkName=gene_protein&from_uid=9782" ref="log$=recordlinks">Protein</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related protein entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pccompound?LinkName=gene_pccompound&from_uid=9782" ref="log$=recordlinks">PubChem Compound</a>
|
||
<div class="brieflinkpop offscreen_noflow">PubChem Compounds</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pcsubstance?LinkName=gene_pcsubstance&from_uid=9782" ref="log$=recordlinks">PubChem Substance</a>
|
||
<div class="brieflinkpop offscreen_noflow">PubChem Substances</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed&from_uid=9782" ref="log$=recordlinks">PubMed</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related PubMed entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed_rif&from_uid=9782" ref="log$=recordlinks">PubMed (GeneRIF)</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related PubMed article from GeneRIFs</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed_citedinomim&from_uid=9782" ref="log$=recordlinks">PubMed (OMIM)</a>
|
||
<div class="brieflinkpop offscreen_noflow">Gene links to PubMed derived from omim_pubmed_cited links</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/pubmed?LinkName=gene_pubmed_pmc_nucleotide&from_uid=9782" ref="log$=recordlinks">PubMed(nucleotide/PMC)</a>
|
||
<div class="brieflinkpop offscreen_noflow">Citations in PubMed identified from shared sequence and PMC links.</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/protein?LinkName=gene_protein_refseq&from_uid=9782" ref="log$=recordlinks">RefSeq Proteins</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to Protein RefSeqs</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/nuccore?LinkName=gene_nuccore_refseqrna&from_uid=9782" ref="log$=recordlinks">RefSeq RNAs</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to Nucleotide RefSeq RNAs</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/nuccore/257467525?report=graph" ref="log$=recordlinks">RefSeqGene</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to Nucleotide RefSeqGenes</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/clinvar?LinkName=gene_clinvar_specific&from_uid=9782" ref="log$=recordlinks">Related gene-specific medical variations</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related medical variations</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/snp?LinkName=gene_snp&from_uid=9782" ref="log$=recordlinks">SNP</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related SNP records</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/taxonomy?LinkName=gene_taxonomy&from_uid=9782" ref="log$=recordlinks">Taxonomy</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related taxonomy entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/variation/view/?q=9782[geneid]" ref="log$=recordlinks">Variation Viewer</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related Variants</div>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet dis-links-to-other-res brieflink">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Links to other resources</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_LinksTwo.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_LinksTwo" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_LinksTwo.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:6912">HGNC</a>
|
||
</li>
|
||
<li>
|
||
<a href="http://www.ensembl.org/id/ENSG00000015479">Ensembl</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.alliancegenome.org/gene/HGNC:6912">AllianceGenome</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/av.cgi?c=geneid&org=9606&l=9782">AceView</a>
|
||
</li>
|
||
<li>
|
||
<a href="http://zearth.kazusa.or.jp/huge/gfpage/KIAA0723">HUGE</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://databases.lovd.nl/shared/genes/MATR3">MATR3 homepage - Leiden Muscular Dystrophy pages</a>
|
||
</li>
|
||
<li>
|
||
<a href="http://genome.ucsc.edu/cgi-bin/hgTracks?org=human&position=NM_001400456">UCSC</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://genecollections.nci.nih.gov/MGC/?ORG=Hs&LIST=BC015031">MGC</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://phgkb.cdc.gov/PHGKB/huGEPedia.action?firstQuery=MATR3&geneID=9782&typeOption=gene&which=2&pubOrderType=pubD&typeSubmit=GO&check=y">HuGE Navigator</a>
|
||
</li>
|
||
<li>
|
||
<a href="http://www.genome.jp/dbget-bin/www_bget?hsa:9782">KEGG</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-general-info">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>General information</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GeneralInfo.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_GeneralInfo" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GeneralInfo.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="/pmc/?term=PMC4383897+OR+PMC3013746+OR+PMC1761442+OR+PMC539985">About Gene</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK3840">FAQ</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://ftp.ncbi.nlm.nih.gov/gene/">FTP site</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK3841/">Help</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK3842/">My NCBI help</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK21085/">NCBI Handbook</a>
|
||
</li>
|
||
<li>
|
||
<a href="/gene/statistics/">Statistics</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-related-sites">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Related sites</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedSites.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_RelatedSites" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedSites.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/BLAST">BLAST</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/genome">Genome</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/bioproject">BioProject</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/genome/gdv/">Genome Data Viewer</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/geo">GEO</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/omim">OMIM</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/probe">Probe</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/RefSeq">RefSeq</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-feedback">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Feedback</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Feedback.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_Feedback" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Feedback.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://support.ncbi.nlm.nih.gov/ics/support/ticketnewwizard.asp?style=classic&deptID=28049">Contact Help Desk</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/RefSeq/update.cgi?geneid=9782&symbol=MATR3">Submit Correction</a>
|
||
</li>
|
||
<li>
|
||
<a href="/gene/submit-generif?geneId=9782&sym=MATR3&name=matrin 3&org=Homo sapiens">Submit GeneRIF</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-subscription">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Subscription</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Subscription.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_Subscription" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Subscription.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/mailman/listinfo/refseq-announce">RefSeq</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
|
||
<!-- <component id="Gene_RVFullReport.Gene_RightColMenuLinks"/>-->
|
||
<div class="portlet">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Recent activity</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="recent_activity" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<div id="HTDisplay" class="">
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.Cmd" sid="1" type="hidden" />
|
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Clear
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|
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<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=1" href="/portal/utils/pageresolver.fcgi?recordid=67c9e1dbf4a390645e43937b">MATR3 matrin 3 [Homo sapiens]</a>
|
||
<div class="ralinkpop offscreen_noflow">MATR3 matrin 3 [Homo sapiens]<div class="brieflinkpopdesc">Gene ID:9782</div></div>
|
||
<div class="tertiary">Gene</div>
|
||
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|
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<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=2" href="/portal/utils/pageresolver.fcgi?recordid=67c9e1d9f4a390645e438d46">matrin-3 isoform a [Homo sapiens]</a>
|
||
<div class="ralinkpop offscreen_noflow">matrin-3 isoform a [Homo sapiens]<div class="brieflinkpopdesc">gi|21626466|ref|NP_061322.2|</div></div>
|
||
<div class="tertiary">Protein</div>
|
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</li>
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<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=3" href="/portal/utils/pageresolver.fcgi?recordid=67c9e1d7b15b832ebc159f0a">MARCHF8 membrane associated ring-CH-type finger 8 [Homo sapiens]</a>
|
||
<div class="ralinkpop offscreen_noflow">MARCHF8 membrane associated ring-CH-type finger 8 [Homo sapiens]<div class="brieflinkpopdesc">Gene ID:220972</div></div>
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<div class="tertiary">Gene</div>
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|
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<div class="ralinkpop offscreen_noflow">E3 ubiquitin-protein ligase MARCHF8 isoform b [Homo sapiens]<div class="brieflinkpopdesc">gi|544583444|ref|NP_001269795.1|</div></div>
|
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<div class="tertiary">Protein</div>
|
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<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=5" href="/portal/utils/pageresolver.fcgi?recordid=67c9e1d484f3725e59431f76">MAPKAPK2 MAPK activated protein kinase 2 [Homo sapiens]</a>
|
||
<div class="ralinkpop offscreen_noflow">MAPKAPK2 MAPK activated protein kinase 2 [Homo sapiens]<div class="brieflinkpopdesc">Gene ID:9261</div></div>
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<div class="tertiary">Gene</div>
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<div class="row">
|
||
<div class="col-lg-12 centered-lg">
|
||
<nav class="bottom-links">
|
||
<ul class="mt-3">
|
||
<li>
|
||
<a class="text-white" href="//www.nlm.nih.gov/">NLM</a>
|
||
</li>
|
||
<li>
|
||
<a class="text-white" href="https://www.nih.gov/">NIH</a>
|
||
</li>
|
||
<li>
|
||
<a class="text-white" href="https://www.hhs.gov/">HHS</a>
|
||
</li>
|
||
<li>
|
||
<a class="text-white" href="https://www.usa.gov/">USA.gov</a>
|
||
</li>
|
||
</ul>
|
||
</nav>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
</section>
|
||
<script type="text/javascript" src="/portal/portal3rc.fcgi/rlib/js/InstrumentOmnitureBaseJS/InstrumentNCBIConfigJS/InstrumentNCBIBaseJS/InstrumentPageStarterJS.js?v=1"> </script>
|
||
<script type="text/javascript" src="/portal/portal3rc.fcgi/static/js/hfjs2.js"> </script>
|
||
</div>
|
||
|
||
</div>
|
||
<div><input name="EntrezSystem2.PEntrez.DbConnector.Db" sid="1" type="hidden" value="gene" /><input name="EntrezSystem2.PEntrez.DbConnector.LastDb" sid="1" type="hidden" value="gene" /><input name="EntrezSystem2.PEntrez.DbConnector.Term" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.DbConnector.LastTabCmd" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.DbConnector.LastQueryKey" sid="1" type="hidden" value="3748" /><input name="EntrezSystem2.PEntrez.DbConnector.IdsFromResult" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.DbConnector.LastIdsFromResult" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.DbConnector.LinkName" sid="1" type="hidden" /><input name="EntrezSystem2.PEntrez.DbConnector.LinkReadableName" sid="1" type="hidden" /><input name="EntrezSystem2.PEntrez.DbConnector.LinkSrcDb" sid="1" type="hidden" /><input name="EntrezSystem2.PEntrez.DbConnector.Cmd" sid="1" type="hidden" /><input name="EntrezSystem2.PEntrez.DbConnector.TabCmd" sid="1" type="hidden" /><input name="EntrezSystem2.PEntrez.DbConnector.QueryKey" sid="1" type="hidden" /></div>
|
||
<input type="hidden" name="p$a" id="p$a" /><input type="hidden" name="p$l" id="p$l" value="EntrezSystem2" /><input type="hidden" name="p$st" id="p$st" value="gene" /><input name="SessionId" id="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" id="Snapshot" value="/projects/Gene/Gene@4.23" disabled="disabled" type="hidden" /></form>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<!-- CE8B5AF87C7FFCB1_0191SID /projects/Gene/Gene@4.23 portal103 v4.1.r689238 Tue, Oct 22 2024 16:10:51 -->
|
||
<span id="portal-csrf-token" style="display:none" data-token="CE8B5AF87C7FFCB1_0191SID"></span>
|
||
|
||
|
||
<script type='text/javascript' src='/portal/js/portal.js'></script><script type="text/javascript" src="//static.pubmed.gov/portal/portal3rc.fcgi/4223056/js/4159018/4215793/3812534/4212053/3812535/3781604/4080513/4199696/4186313/4149125/3758627/1778515/3908752/4218709/4180241/4218713/4201890/4201900/6358/4113715/4114118/4221838/4160390/4153707/1689922/3816816/3887815/3887817/3317080/4188659/4076482/31971/35962/35603/4109166/33966/35599/35596/35601/35595/35602/3397055/4001808.js" snapshot="gene"></script></body>
|
||
</html> |