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1361 lines
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228 KiB
XML
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<h1 class="res_name"><a href="/gene/">Gene</a></h1>
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<h2 class="res_tagline">Genes and mapped phenotypes</h2>
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<div class="search"><div class="search_form"><label for="database" class="offscreen_noflow">Search database</label><select id="database"><optgroup label="Recent"><option value="nuccore" data-ac_dict="nuccore">Nucleotide</option><option value="gds">GEO DataSets</option><option value="geoprofiles" class="last">GEO Profiles</option></optgroup><optgroup label="All"><option value="gquery">All Databases</option><option value="assembly" data-ac_dict="assembly">Assembly</option><option value="biocollections">Biocollections</option><option value="bioproject">BioProject</option><option value="biosample">BioSample</option><option value="books">Books</option><option value="clinvar">ClinVar</option><option value="cdd">Conserved Domains</option><option value="gap">dbGaP</option><option value="dbvar">dbVar</option><option value="gene" selected="selected" data-ac_dict="gene">Gene</option><option value="genome" data-ac_dict="genome">Genome</option><option value="gds">GEO DataSets</option><option value="geoprofiles">GEO Profiles</option><option value="gtr">GTR</option><option value="ipg">Identical Protein Groups</option><option value="medgen">MedGen</option><option value="mesh">MeSH</option><option value="nlmcatalog">NLM Catalog</option><option value="nuccore" data-ac_dict="nuccore">Nucleotide</option><option value="omim">OMIM</option><option value="pmc">PMC</option><option value="protein" data-ac_dict="protein">Protein</option><option value="proteinclusters">Protein Clusters</option><option value="protfam">Protein Family Models</option><option value="pcassay">PubChem BioAssay</option><option value="pccompound">PubChem Compound</option><option value="pcsubstance">PubChem Substance</option><option value="pubmed">PubMed</option><option value="snp">SNP</option><option value="sra">SRA</option><option value="structure">Structure</option><option value="taxonomy">Taxonomy</option><option value="toolkit">ToolKit</option><option value="toolkitall">ToolKitAll</option><option value="toolkitbookgh">ToolKitBookgh</option></optgroup></select><div class="nowrap"><label for="term" class="offscreen_noflow" accesskey="/">Search term</label><div class="nowrap"><input type="text" name="term" id="term" title="Search Gene. Use up and down arrows to choose an item from the autocomplete." value="" class="jig-ncbiclearbutton jig-ncbiautocomplete" data-jigconfig="dictionary:'gene',disableUrl:'NcbiSearchBarAutoComplCtrl'" autocomplete="off" data-sbconfig="ds:'no',pjs:'yes',afs:'yes'" /></div><button id="search" type="submit" class="button_search nowrap" cmd="go">Search</button></div></div><ul class="searchlinks inline_list"><set></set><li><a href="/gene/advanced">Advanced</a></li><li class="help"><a id="help" class="jig-ncbihelpwindow" target="ncbihelp" name="help" href="/books/NBK3841/">Help</a></li></ul></div>
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<input name="EntrezSystem2.PEntrez.Gene.Gene_PageController.PreviousPageName" sid="1" type="hidden" value="results" />
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<div id="faceted_search" class="facet_hide">
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<h2 class="offscreen_noflow">Result Filters</h2>
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<div class="facet_cont" data-db="gene" data-default_grps="fg_gene-sources,fg_categories,fg_sequence-content,fg_status" data-sd="db:'gene',op:'select',term:'',qk:'118',linkname:'',idsfromresult:'102547700',extra:''"><ul class="facet" data-filter_id="gene-sources" id="_gene-sources"><li class="filter_grp "><div class="clearfix"><h3>Gene sources</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="genomic">Genomic</a></li></ul></li></ul><ul class="facet" data-filter_id="categories" id="_categories"><li class="filter_grp "><div class="clearfix"><h3>Categories</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="annotated-genes">Annotated genes</a></li><li class="fil_val"><a href="#" data-value_id="non-coding">Non-coding</a></li></ul></li></ul><ul class="facet" data-filter_id="sequence-content" id="_sequence-content"><li class="filter_grp "><div class="clearfix"><h3>Sequence content</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><li class="fil_val"><a href="#" data-value_id="refseq">RefSeq</a></li></ul></li></ul><ul class="facet" data-filter_id="status" id="_status"><li class="filter_grp "><div class="clearfix"><h3>Status</h3><a href="#" data-value_id="" class="clear clear_show">Clear</a></div><ul><li class="fil_val selected"><a href="#" data-value_id="current-only">Current</a><span class="fcount">(1)</span></li></ul></li></ul><div id="chr-location-facet-wrapper" data-bid="MCID_67d295317122bd12d2b7af3a" data-hid="MCID_67d2949e1a48797f60a5f528" data-qky="118" class="disabled" style="display:none"><ul class="facet" data-filter_id="chromosomal-region" id="_chromosomal-region" data-of="yes"><li class="filter_grp of_grp"><div class="clearfix"><h3>Chromosome locations</h3><a href="#" data-value_id="" class="clear clear_hide">Clear</a></div><ul><a id="facet_ofchromosomal-region" href="#facet_of_divchromosomal-region" class="jig-ncbipopper" data-jigconfig="triggerPosition: 'middle right', destPosition: 'middle left', hasArrow: true, arrowDirection: 'left', closeEvent : 'click', openEvent: 'click', adjustFit: 'autoAdjust', openAnimation: 'none', closeAnimation: 'none', addCloseButton:true, width: '375px'" data-value_id="fetch_more">more...</a><div id="facet_of_divchromosomal-region" style="display:none;" class="of_popup"><h4>Chromosome locations</h4><label for="organism-filter" style="width:100%;margin-bottom:.2em;" class="">Select an organism by typing or scrolling</label><input type="text" placeholder="Enter text to narrow down the list" id="organism-filter" style="width:98%;" autocomplete="off" /><br /><div id="chr-region-tax-list"><select id="of_chromosomal-region" size="9" class="chr-region-tax-list" style="width:100%;"></select></div><div id="chr-location-info-ctrl" data-disabled="disabled"><div class="chr-field"><label for="chr-name">Chromosome</label><br /><select id="chr-name" class="chr-field" disabled="disabled"></select></div><div class="chr-field"><label for="chr-from">From</label><br /><input type="text" name="chr-from" id="chr-from" disabled="disabled" class="chr-field" /></div><div class="chr-field"><label for="chr-to">To</label><br /><input type="text" name="chr-to" id="chr-to" disabled="disabled" class="chr-field" /></div></div><div class="actions clearfix"><button class="jig-ncbibutton of_add apply-chr" data-jigconfig="'color': 'ui-ncbibutton-blue'">Apply</button></div></div></ul></li></ul></div><ul class="facet facet_reset"><li><a href="#" data-value_id="reset">Clear all</a></li></ul><ul class="facet_tools"><li><a id="more_filter_groups_link" href="#more_filter_groups" class="jig-ncbipopper" data-jigconfig="triggerPosition: 'middle right', destPosition: 'top left', hasArrow: true, arrowDirection: 'left', closeEvent : 'click', openEvent: 'click', adjustFit: 'autoAdjust', openAnimation: 'none', closeAnimation: 'none', addCloseButton:true, width: '180px'">
|
||
Show additional filters</a></li><div id="more_filter_groups" style="display:none;" class="facets_dialog"><button class="ui-ncbipopper-close-button ui-ncbipopper-close-button-generated ui-state-default ui-corner-all ui-button-text-only ui-ncbibutton ui-ncbibutton-blue" generated="true" role="button" aria-disabled="false"><span class="ui-button-text">x</span></button><h4>Additional filters</h4><ul class="filter_groups_more facet"><li><input type="checkbox" id="fg_gene-sources" /><label for="fg_gene-sources">Gene sources</label></li><li><input type="checkbox" id="fg_categories" /><label for="fg_categories">Categories</label></li><li><input type="checkbox" id="fg_sequence-content" /><label for="fg_sequence-content">Sequence content</label></li><li><input type="checkbox" id="fg_status" /><label for="fg_status">Status</label></li><li><input type="checkbox" id="fg_chromosomal-region" /><label for="fg_chromosomal-region">Chromosome locations</label></li><li><input id="fg_field_search" type="checkbox" /><label for="fg_field_search">Search fields</label></li></ul><div class="actions clearfix"><button class="filter_groups_more_apply jig-ncbibutton primary-action" id="filter_groups_apply" data-jigconfig="'color': 'ui-ncbibutton-blue'">Show</button></div></div></ul><input name="EntrezSystem2.PEntrez.Gene.Gene_Facets.FacetsUrlFrag" sid="1" type="hidden" value="filters=current-only" /><input name="EntrezSystem2.PEntrez.Gene.Gene_Facets.FacetSubmitted" sid="1" type="hidden" value="false" /><input name="EntrezSystem2.PEntrez.Gene.Gene_Facets.BMFacets" sid="1" type="hidden" value="" /></div>
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|
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<span style="display: block; text-align: center;">S</span>
|
||
<span style="display: block; text-align: center;">I</span>
|
||
<span style="display: block; text-align: center;">D</span>
|
||
<span style="display: block; text-align: center;">E</span>
|
||
<span style="display: block; text-align: center;">B</span>
|
||
<span style="display: block; text-align: center;">A</span>
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<span style="display: block; text-align: center;">R</span>
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<div class="results_settings one_setting"><ul class="inline_list left display_settings"><li><a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Display" sid="0" href="#" class="jig-ncbipopper" data-jigconfig="triggerPosition : 'bottom center',destPosition : 'top center',destSelector : '#display_settings_menu_report', hasArrow : false,openEvent : 'click',closeEvent : 'click',isTriggerElementCloseClick: false,addCloseButton : false, groupName: 'entrez_pg'" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Display">Full Report<span href="#" class="tgt_dark"></span></a></li></ul><div id="display_settings_menu_report" class="disp_settings tabPopper"><fieldset class="format"><legend>Format</legend><ul class="column_list"><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="1" value="full_report" format="" id="full_report" checked="true" /><label for="full_report">Full Report</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="2" value="full_report" format="text" id="full_reporttext" /><label for="full_reporttext">Full Report (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="3" value="expression" format="" id="expression" /><label for="expression">Expression</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="4" value="gene_table" format="" id="gene_table" /><label for="gene_table">Gene Table</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="5" value="gene_table" format="text" id="gene_tabletext" /><label for="gene_tabletext">Gene Table (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="6" value="generif" format="" id="generif" /><label for="generif">GeneRIF</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="7" value="docsum" format="" id="docsum" /><label for="docsum">Summary</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="8" value="docsum" format="text" id="docsumtext" /><label for="docsumtext">Summary (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="9" value="tabular" format="" id="tabular" /><label for="tabular">Tabular</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="10" value="tabular" format="text" id="tabulartext" /><label for="tabulartext">Tabular (text)</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="11" value="asn1" format="text" id="asn1text" /><label for="asn1text">ASN.1</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="12" value="xml" format="text" id="xmltext" /><label for="xmltext">XML</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.sPresentation" sid="13" value="uilist" format="text" id="uilisttext" /><label for="uilisttext">UI List</label></li></ul></fieldset></div><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SetDisplay" sid="1" class="button_apply ncbipopper-close-button" style="display:none">Apply</button><h4 class="content_header send_to align_right jig-ncbipopper" id="sendto" data-jigconfig="triggerPosition:'bottom center', destPosition : 'top center',destSelector : '#send_to_menu', hasArrow : false, openEvent : 'click',closeEvent : 'click', isTriggerElementCloseClick: false, addCloseButton:true, groupName: 'entrez_pg', adjustFit:'none'"><a href="#" sourceContent="send_to_menu" class="tgt_dark">Send to:</a><script type="text/javascript">
|
||
jQuery(document).ready( function () {
|
||
jQuery("#send_to_menu input[type='radio']").click( function () {
|
||
var selectedValue = jQuery(this).val().toLowerCase();
|
||
var selectedDiv = jQuery("#send_to_menu div." + selectedValue);
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||
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||
if(selectedDiv.is(":hidden")){
|
||
jQuery("#send_to_menu div.submenu:visible").slideUp();
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||
selectedDiv.slideDown();
|
||
}
|
||
});
|
||
|
||
});
|
||
|
||
jQuery("#sendto").bind("ncbipopperclose", function(){
|
||
jQuery("#send_to_menu div.submenu:visible").css("display","none");
|
||
jQuery("#send_to_menu input[type='radio']:checked").attr("checked",false);
|
||
});
|
||
|
||
</script></h4><div id="send_to_menu" class="tabPopper send_to"><fieldset><legend>Choose Destination</legend><ul class="column_list"><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendTo" sid="1" value="File" id="dest_File" /><label for="dest_File">File</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendTo" sid="2" value="AddToClipboard" id="dest_AddToClipboard" /><label for="dest_AddToClipboard">Clipboard</label></li><li><input type="radio" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendTo" sid="3" value="AddToCollections" id="dest_AddToCollections" /><label for="dest_AddToCollections">Collections</label></li></ul></fieldset><div class="submenu file" id="submenu_File" style="display: none;"><p id="submenu_File_hint" class="hidden"></p><ul><li><label for="file_format">Format</label><select id="file_format" name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.FFormat" sid="1"><option value="full_report" format="text" selected="selected">Full Report (text)</option><option value="gene_table" format="text">Gene Table (text)</option><option value="docsum" format="text">Summary (text)</option><option value="tabular" format="text">Tabular (text)</option><option value="asn1" format="text">ASN.1</option><option value="xml" format="text">XML</option><option value="uilist" format="text">UI List</option></select></li></ul><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendToSubmit" sid="1" class="button_apply file ncbipopper-close-button" type="submit" cmd="File">Create File</button></div><div class="submenu addtoclipboard" id="submenu_AddToClipboard" style="display: none;"><p id="submenu_AddToClipboard_hint" class="hidden"></p><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendToSubmit" sid="2" class="button_apply clipboard ncbipopper-close-button" type="submit" cmd="AddToClipboard">Add to Clipboard</button></div><div class="submenu addtocollections" id="submenu_AddToCollections" style="display: none;"><p id="submenu_AddToCollections_hint" class="hidden"></p><button name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.SendToSubmit" sid="3" class="button_apply collections ncbipopper-close-button" type="submit" cmd="AddToCollections">Add to Collections</button></div></div><div><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.FileFormat" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastPresentation" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Presentation" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PageSize" sid="1" type="hidden" value="20" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastPageSize" sid="1" type="hidden" value="20" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Sort" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastSort" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.FileSort" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.Format" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.LastFormat" sid="1" type="hidden" value="" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PrevPageSize" sid="1" type="hidden" value="20" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PrevPresentation" sid="1" type="hidden" value="full_report" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_DisplayBar.PrevSort" sid="1" type="hidden" value="" /><input type="hidden" id="coll_startindex" name="CollectionStartIndex" value="1" /></div></div>
|
||
<div>
|
||
|
||
|
||
|
||
</div>
|
||
<div class="">
|
||
<div><span id="result_sel" class="nowrap"></span><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_ResultsController.ResultCount" sid="1" type="hidden" id="resultcount" value="1" /><input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_ResultsController.RunLastQuery" sid="1" type="hidden" /></div>
|
||
|
||
</div>
|
||
<div id="messagearea" class="empty">
|
||
|
||
|
||
|
||
|
||
</div>
|
||
<div class="rprt full-rprt">
|
||
<div>
|
||
<div class="rprt-header">
|
||
<input type="hidden" id="gene-tax-id" value="10116" />
|
||
<h1 class="title" id="gene-name"><span class="gn" style="padding-right:.5em;">LOC102547700</span> uncharacterized LOC102547700 [ <em class="tax">Rattus norvegicus</em> (Norway rat)
|
||
]
|
||
</h1>
|
||
<span class="geneid">Gene ID: 102547700, updated on
|
||
17-Aug-2024</span>
|
||
</div>
|
||
<div class="download-datasets">
|
||
<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/axios/0.23.0/axios.min.js"></script>
|
||
<h4 class="download-datasets-popper jig-ncbipopper" id="download-asm" style="align-self:start" data-jigconfig="triggerPosition:'bottom center', destPosition : 'top center',destSelector : '#download-datasets-popper-menu', hasArrow : false, openEvent : 'click',closeEvent : 'click', isTriggerElementCloseClick: false, groupName: 'entrez_pg', adjustFit:'none'" role="button" aria-expanded="false" aria-haspopup="true">
|
||
<svg alt="download" class="dlbtn-icon" x="0px" y="0px" width="15px" height="15px" viewBox="0 0 60 60" enable-background="new 0 0 60 60" xml:space="preserve">
|
||
<g>
|
||
<polygon points="48.75,36.25 48.75,48.75 11.25,48.75 11.25,36.25 5,36.25 5,55 55,55 55,36.25 "></polygon>
|
||
<polygon points="42.5,23.75 36.25,23.75 36.25,5 23.75,5 23.75,23.75 17.5,23.75 30,42.5 "></polygon>
|
||
</g>
|
||
</svg>
|
||
<a href="#">Download Datasets</a>
|
||
</h4>
|
||
<div id="download-datasets-popper-menu" style="display:none;">
|
||
<div class="input-group">
|
||
<input type="checkbox" id="datasets-ft-gene-seq-fasta" value="FASTA_GENE" checked="checked" class="download-datasets-included-seq" />
|
||
<label for="datasets-ft-gene-seq-fasta">Gene Sequences (FASTA)</label>
|
||
</div>
|
||
<div class="input-group">
|
||
<input type="checkbox" id="datasets-ft-transcript-seq-fasta" value="FASTA_RNA" class="download-datasets-included-seq" />
|
||
<label for="datasets-ft-transcript-seq-fasta">Transcript sequences (FASTA)</label>
|
||
</div>
|
||
<div class="input-group">
|
||
<input type="checkbox" id="datasets-ft-protein-seq-fasta" value="FASTA_PROTEIN" class="download-datasets-included-seq" />
|
||
<label for="datasets-ft-protein-seq-fasta">Protein sequences(FASTA)</label>
|
||
</div>
|
||
<p style="margin-left:5px;">In addition, your package will include a detailed data report in both TSV and JSONL formats.</p>
|
||
<div class="input-group">
|
||
<label for="datasets-download-file-name">File name</label>
|
||
<input type="text" id="datasets-download-file-name" placeholder="Name your file" style="padding:5px;" value="LOC102547700_datasets.zip" />
|
||
</div>
|
||
<input type="hidden" id="download-datasets-base-url" value="https://api.ncbi.nlm.nih.gov/datasets/v2alpha/gene/download" />
|
||
<input type="hidden" id="gene-id-value" value="102547700" />
|
||
<button id="datasets-download-submit" data-ga-action="click_begin_download" data-ga-label="download" class="jig-ncbibutton ui-state-default ui-corner-all ui-button-text-only ui-ncbibutton ui-ncbibutton-gray" role="button">
|
||
<span class="ui-button-text">Download</span>
|
||
</button>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-body">
|
||
|
||
|
||
<div class="rprt-section gene-summary">
|
||
<section class="rprt-section-header" id="summary">
|
||
<h2 id="header-summary">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-summary .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Summary</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Summary_2" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div id="summaryDiv" class="section">
|
||
<dl id="summaryDl">
|
||
<dt class="noline"> Symbol</dt>
|
||
<dd class="noline">LOC102547700<span class="prov">provided by <a href="http://rgd.mcw.edu/nomen/nomen.shtml" target="_blank" title="Rat Genome Database">RGD</a></span></dd>
|
||
<dt> Full Name</dt>
|
||
<dd>uncharacterized LOC102547700<span class="prov">provided by <a href="http://rgd.mcw.edu/nomen/nomen.shtml" target="_blank" title="Rat Genome Database">RGD</a></span></dd>
|
||
<dt>Primary source</dt>
|
||
<dd>
|
||
<a href="https://rgd.mcw.edu/rgdweb/search/search.html?term=7606883" data-gblink-text="Ensembl">RGD:7606883</a>
|
||
</dd>
|
||
<dt>See related</dt>
|
||
<dd>
|
||
<a href="https://www.alliancegenome.org/gene/RGD:7606883" data-gblink-text="Ensembl" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=RGD:7606883">AllianceGenome:RGD:7606883</a>
|
||
</dd>
|
||
<dt>Gene type</dt>
|
||
<dd>ncRNA</dd>
|
||
<dt>RefSeq status</dt>
|
||
<dd>MODEL</dd>
|
||
<dt>Organism</dt>
|
||
<dd class="tax">
|
||
<a href="/Taxonomy/Browser/wwwtax.cgi?id=10116" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=10116">Rattus norvegicus</a>
|
||
</dd>
|
||
<dt>Lineage</dt>
|
||
<dd class="tax">Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus</dd>
|
||
<dt>Expression</dt>
|
||
<dd>Biased expression in Thymus (RPKM 99.4), Spleen (RPKM 77.5) and 9 other tissues <a href="#gene-expression">See more</a></dd>
|
||
<dt style="padding-top:.5em;">
|
||
<span class="new-icon">NEW</span>
|
||
</dt>
|
||
<dd style="padding-top:.5em;">
|
||
<strong>Try the new <a href="https://www.ncbi.nlm.nih.gov/datasets/gene/id/102547700/" data-ga-category="summary" data-ga-action="click_datasets_link" data-ga-label="gene_table" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report.">Gene table</a></strong>
|
||
<br />
|
||
<strong>Try the new <a href="https://www.ncbi.nlm.nih.gov/datasets/gene/id/102547700/products/" data-ga-category="summary" data-ga-action="click_datasets_link" data-ga-label="transcript_table" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report.">Transcript table</a></strong>
|
||
</dd>
|
||
</dl>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-genomic-context">
|
||
<section class="rprt-section-header" id="genomic-context">
|
||
<h2 id="header-genomic-context">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-genomic-context .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Genomic context</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Genomic_Context" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div class="gc_cont">
|
||
<div class="gt_cont_contents">
|
||
<div style="float:right"><span>See LOC102547700 in </span><a href="/genome/gdv/?context=gene&acc=102547700" class="link-to-gdv genome-browser-link" data-genome-browser-link-sort="1" data-acc="GCF_036323735.1">Genome Data Viewer</a> </div>
|
||
<dl class="dl-chr-info" style="float:left;margin-top:0;">
|
||
<dt>Location: </dt>
|
||
<dd>
|
||
<span style="display:inline-block;">14q21</span>
|
||
</dd>
|
||
</dl>
|
||
</div>
|
||
<dl class="dl-chr-info exon-count">
|
||
<dt>Exon count: </dt>
|
||
<dd>4</dd>
|
||
</dl>
|
||
<div class="ui-ncbigrid-outer-div" id="genomic-context-tbl-location">
|
||
<div class="ui-ncbigrid-inner-div">
|
||
<table class="jig-ncbigrid" data-jigconfig="">
|
||
<thead>
|
||
<tr>
|
||
<th style="max-width:15%">Annotation release</th>
|
||
<th style="max-width:10%">Status</th>
|
||
<th>Assembly</th>
|
||
<th>
|
||
<span title="Chromosome">Chr</span>
|
||
</th>
|
||
<th>Location</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody>
|
||
<tr>
|
||
<td>RS_2024_02</td>
|
||
<td>current</td>
|
||
<td>GRCr8 (<a href="/assembly/GCF_036323735.1/" ref="ncbi_uid=102547700&link_uid=GCF_036323735.1">GCF_036323735.1</a>)</td>
|
||
<td>14</td>
|
||
<td>NC_086032.1 (85619711..85622785, complement) </td>
|
||
</tr>
|
||
<tr>
|
||
<td>RS_2023_06</td>
|
||
<td>previous assembly</td>
|
||
<td>mRatBN7.2 (<a href="/assembly/GCF_015227675.2/" ref="ncbi_uid=102547700&link_uid=GCF_015227675.2">GCF_015227675.2</a>)</td>
|
||
<td>14</td>
|
||
<td>NC_051349.1 (81405794..81408847, complement) </td>
|
||
</tr>
|
||
<tr>
|
||
<td>
|
||
<a href="https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Rattus_norvegicus/106" ref="ncbi_uid=102547700">106</a>
|
||
</td>
|
||
<td>previous assembly</td>
|
||
<td>Rnor_6.0 (<a href="/assembly/GCF_000001895.5/" ref="ncbi_uid=102547700&link_uid=GCF_000001895.5">GCF_000001895.5</a>)</td>
|
||
<td>14</td>
|
||
<td>NC_005113.4 (86800340..86803390, complement) </td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<p class="withnote margin_t2em"><strong>Chromosome 14 - NC_086032.1</strong><img usemap="#nbrMap102547700_2671914591" border="0" alt="Genomic Context describing neighboring genes" src="/gutils/geneneighb.fcgi?geneid=102547700&nuc_gi=2671914591&n0=LOC103693157&n1=Myo1g&n2=LOC102547700&n3=LOC134478783&n4=Ccm2&n5=C1h11orf98-ps3&n6=Nacad" /><map name="nbrMap102547700_2671914591" id="nbrMap102547700_2671914591">
|
||
<area shape="rect" onMouseOver="showtip(this,event,'uncharacterized LOC103693157')" onMouseOut="hidetip()" coords="2,23,98,31" alt="Neighboring gene uncharacterized LOC103693157" href="/gene/103693157" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'myosin IG')" onMouseOut="hidetip()" coords="91,35,170,43" alt="Neighboring gene myosin IG" href="/gene/289785" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'small nucleolar RNA SNORA9')" onMouseOut="hidetip()" coords="129,47,199,55" alt="Neighboring gene small nucleolar RNA SNORA9" href="/gene/134478783" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'CCM2 scaffold protein')" onMouseOut="hidetip()" coords="206,23,386,31" alt="Neighboring gene CCM2 scaffold protein" href="/gene/305505" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'uncharacterized protein C11orf98 homolog')" onMouseOut="hidetip()" coords="216,35,296,43" alt="Neighboring gene uncharacterized protein C11orf98 homolog" href="/gene/120096655" />
|
||
<area shape="rect" onMouseOver="showtip(this,event,'NAC alpha domain containing')" onMouseOut="hidetip()" coords="363,35,423,43" alt="Neighboring gene NAC alpha domain containing" href="/gene/289786" />
|
||
</map>
|
||
</p>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="rprt-section gene-genomic-regions-transcripts-products">
|
||
<section class="rprt-section-header" id="genomic-regions-transcripts-products">
|
||
<h2 id="header-genomic-regions-transcripts-products">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-genomic-regions-transcripts-products .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Genomic regions, transcripts, and products</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Genomic_Regions_Transcripts_a" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div>
|
||
<div style="text-align:right;">Go to <a href="#reference-sequences">reference sequence details</a></div>
|
||
</div>
|
||
<div>
|
||
<p class="choose">
|
||
<label for="accession" class="label">Genomic Sequence: </label>
|
||
<select name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.accessionList" sid="1" id="accessionList" data-taxid="10116" data-geneid="102547700">
|
||
<option value="NC_086032.1_85619710_85622784">NC_086032.1 Chromosome 14 Reference GRCr8</option>
|
||
<option value="NC_051349.1_81405793_81408846">NC_051349.1 Chromosome 14 Reference mRatBN7.2 Primary Assembly</option>
|
||
<option value="NC_005113.4_86800339_86803389">NC_005113.4 Chromosome 14 Reference Rnor_6.0 Primary Assembly</option>
|
||
</select>
|
||
</p>
|
||
</div>
|
||
<div id="NC_086032" class="divAccession">
|
||
<div class="seq-viewer">
|
||
<p class="note-link">
|
||
<strong>Go to nucleotide:</strong>
|
||
<a title="Nucleotide Graphic report" href="/nuccore/NC_086032.1?report=graph&from=85619249&to=85623245&strand=true&app_context=Gene&assm_context=GCF_036323735.1" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=NC_086032.1">Graphics</a>
|
||
<a title="Nucleotide FASTA report" href="/nuccore/NC_086032.1?report=fasta&from=85619711&to=85622785&strand=true" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=NC_086032.1">FASTA</a>
|
||
<a title="Nucleotide GenBank report" href="/nuccore/NC_086032.1?report=genbank&from=85619711&to=85622785&strand=true" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=NC_086032.1">GenBank</a>
|
||
</p>
|
||
<div id="divNC_086032" class="SeqViewerApp" style="clear:both;" data-sv="appname=ncbigene&embedded=true&noslider=1&id=NC_086032.1&from=85619249&to=85623245&strand=true&app_context=Gene&assm_context=GCF_036323735.1">
|
||
<a href="?appname=ncbigene&embedded=true&noslider=1&id=NC_086032.1&from=85619249&to=85623245&strand=true&app_context=Gene&assm_context=GCF_036323735.1"></a>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NC_086032.1" sid="1" type="hidden" id="nucleotideLink_NC_086032_1_85619710_85622784" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NC_086032.1?report=graph&amp;from=85619249&amp;to=85623245&amp;strand=true&amp;app_context=Gene&amp;assm_context=GCF_036323735.1" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_086032.1">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NC_086032.1?report=fasta&amp;from=85619711&amp;to=85622785&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_086032.1">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NC_086032.1?report=genbank&amp;from=85619711&amp;to=85622785&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_086032.1">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NC_086032.1" sid="1" type="hidden" id="relString_NC_086032_1_85619710_85622784" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NC_086032.1&amp;from=85619249&amp;to=85623245&amp;strand=true&amp;app_context=Gene&amp;assm_context=GCF_036323735.1" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NC_051349.1" sid="1" type="hidden" id="nucleotideLink_NC_051349_1_81405793_81408846" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NC_051349.1?report=graph&amp;from=81405335&amp;to=81409304&amp;strand=true&amp;app_context=Gene&amp;assm_context=GCF_015227675.2" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_051349.1">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NC_051349.1?report=fasta&amp;from=81405794&amp;to=81408847&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_051349.1">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NC_051349.1?report=genbank&amp;from=81405794&amp;to=81408847&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_051349.1">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NC_051349.1" sid="1" type="hidden" id="relString_NC_051349_1_81405793_81408846" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NC_051349.1&amp;from=81405335&amp;to=81409304&amp;strand=true&amp;app_context=Gene&amp;assm_context=GCF_015227675.2" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.nucleotideLink_NC_005113.4" sid="1" type="hidden" id="nucleotideLink_NC_005113_4_86800339_86803389" value="<p class="note-link"><strong>Go to nucleotide:</strong><a title="Nucleotide Graphic report" href="/nuccore/NC_005113.4?report=graph&amp;from=86799881&amp;to=86803847&amp;strand=true&amp;app_context=Gene&amp;assm_context=GCF_000001895.5" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_005113.4">Graphics</a><a title="Nucleotide FASTA report" href="/nuccore/NC_005113.4?report=fasta&amp;from=86800340&amp;to=86803390&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_005113.4">FASTA</a><a title="Nucleotide GenBank report" href="/nuccore/NC_005113.4?report=genbank&amp;from=86800340&amp;to=86803390&amp;strand=true" ref="ordinalpos=1&amp;ncbi_uid=102547700&amp;link_uid=NC_005113.4">GenBank</a></p>" />
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_GenomicProductsP.relString_NC_005113.4" sid="1" type="hidden" id="relString_NC_005113_4_86800339_86803389" value="appname=ncbigene&amp;embedded=true&amp;noslider=1&amp;id=NC_005113.4&amp;from=86799881&amp;to=86803847&amp;strand=true&amp;app_context=Gene&amp;assm_context=GCF_000001895.5" />
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-gene-expression">
|
||
<section class="rprt-section-header" id="gene-expression">
|
||
<h2 id="header-gene-expression">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-gene-expression .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Expression</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Expression" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div>
|
||
<div style="text-align:right;">
|
||
<a href="/gene/102547700/?report=expression" data-url="/gene/102547700/?report=expression" id="gene-expression-see-details">See details</a>
|
||
</div>
|
||
<div id="gene-expression-app" data-url="https://www.ncbi.nlm.nih.gov/gene/102547700" data-report-type="summary">
|
||
<div>
|
||
<script type="text/javascript">
|
||
|
||
window.tissues_data = {'adrenal 2 weeks': {'id': '102547700_Adrenal_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'adrenal 2 weeks', 'supp_source': ['2 weeks', 'adrenal'], 'full_rpkm': 2.49041, 'exp_rpkm': 2.49, 'var': 0.05314456, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862929}, 'adrenal 6 weeks': {'id': '102547700_Adrenal_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'adrenal 6 weeks', 'supp_source': ['6 weeks', 'adrenal'], 'full_rpkm': 1.82958, 'exp_rpkm': 1.83, 'var': 0.0992128, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862930}, 'adrenal 21 weeks': {'id': '102547700_Adrenal_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'adrenal 21 weeks', 'supp_source': ['21 weeks', 'adrenal'], 'full_rpkm': 1.63535, 'exp_rpkm': 1.64, 'var': 0.06617392, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862931}, 'adrenal 104 weeks': {'id': '102547700_Adrenal_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'adrenal 104 weeks', 'supp_source': ['104 weeks', 'adrenal'], 'full_rpkm': 1.53804, 'exp_rpkm': 1.54, 'var': 0.0858248, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862932}, 'brain 2 weeks': {'id': '102547700_Brain_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'brain 2 weeks', 'supp_source': ['2 weeks', 'brain'], 'full_rpkm': 1.21897, 'exp_rpkm': 1.22, 'var': 0.086932, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862933}, 'brain 6 weeks': {'id': '102547700_Brain_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'brain 6 weeks', 'supp_source': ['6 weeks', 'brain'], 'full_rpkm': 0.772902, 'exp_rpkm': 0.773, 'var': 0.04621384, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862934}, 'brain 21 weeks': {'id': '102547700_Brain_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'brain 21 weeks', 'supp_source': ['21 weeks', 'brain'], 'full_rpkm': 0.736587, 'exp_rpkm': 0.737, 'var': 0.02663968, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862935}, 'brain 104 weeks': {'id': '102547700_Brain_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'brain 104 weeks', 'supp_source': ['104 weeks', 'brain'], 'full_rpkm': 0.872493, 'exp_rpkm': 0.872, 'var': 0.04256488, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862936}, 'heart 2 weeks': {'id': '102547700_Heart_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'heart 2 weeks', 'supp_source': ['2 weeks', 'heart'], 'full_rpkm': 1.64157, 'exp_rpkm': 1.64, 'var': 0.0278684, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862937}, 'heart 6 weeks': {'id': '102547700_Heart_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'heart 6 weeks', 'supp_source': ['6 weeks', 'heart'], 'full_rpkm': 1.64035, 'exp_rpkm': 1.64, 'var': 0.02186744, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862938}, 'heart 21 weeks': {'id': '102547700_Heart_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'heart 21 weeks', 'supp_source': ['21 weeks', 'heart'], 'full_rpkm': 1.85009, 'exp_rpkm': 1.85, 'var': 0.1882752, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862939}, 'heart 104 weeks': {'id': '102547700_Heart_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'heart 104 weeks', 'supp_source': ['104 weeks', 'heart'], 'full_rpkm': 1.69229, 'exp_rpkm': 1.69, 'var': 0.0918416, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862940}, 'kidney 2 weeks': {'id': '102547700_Kidney_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'kidney 2 weeks', 'supp_source': ['2 weeks', 'kidney'], 'full_rpkm': 1.20175, 'exp_rpkm': 1.2, 'var': 0.032542, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862941}, 'kidney 6 weeks': {'id': '102547700_Kidney_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'kidney 6 weeks', 'supp_source': ['6 weeks', 'kidney'], 'full_rpkm': 1.25307, 'exp_rpkm': 1.25, 'var': 0.05387392, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862942}, 'kidney 21 weeks': {'id': '102547700_Kidney_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'kidney 21 weeks', 'supp_source': ['21 weeks', 'kidney'], 'full_rpkm': 1.05985, 'exp_rpkm': 1.06, 'var': 0.0162704, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862943}, 'kidney 104 weeks': {'id': '102547700_Kidney_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'kidney 104 weeks', 'supp_source': ['104 weeks', 'kidney'], 'full_rpkm': 1.23643, 'exp_rpkm': 1.24, 'var': 0.02142504, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862944}, 'liver 2 weeks': {'id': '102547700_Liver_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'liver 2 weeks', 'supp_source': ['2 weeks', 'liver'], 'full_rpkm': 1.96637, 'exp_rpkm': 1.97, 'var': 0.0891992, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862945}, 'liver 6 weeks': {'id': '102547700_Liver_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'liver 6 weeks', 'supp_source': ['6 weeks', 'liver'], 'full_rpkm': 1.88477, 'exp_rpkm': 1.88, 'var': 0.02427672, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862946}, 'liver 21 weeks': {'id': '102547700_Liver_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'liver 21 weeks', 'supp_source': ['21 weeks', 'liver'], 'full_rpkm': 1.46821, 'exp_rpkm': 1.47, 'var': 0.06660464, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862947}, 'liver 104 weeks': {'id': '102547700_Liver_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'liver 104 weeks', 'supp_source': ['104 weeks', 'liver'], 'full_rpkm': 1.35071, 'exp_rpkm': 1.35, 'var': 0.05706528, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862948}, 'lung 2 weeks': {'id': '102547700_Lung_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'lung 2 weeks', 'supp_source': ['2 weeks', 'lung'], 'full_rpkm': 1.4669, 'exp_rpkm': 1.47, 'var': 0.05376888, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862949}, 'lung 6 weeks': {'id': '102547700_Lung_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'lung 6 weeks', 'supp_source': ['6 weeks', 'lung'], 'full_rpkm': 1.47745, 'exp_rpkm': 1.48, 'var': 0.03348712, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862950}, 'lung 21 weeks': {'id': '102547700_Lung_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'lung 21 weeks', 'supp_source': ['21 weeks', 'lung'], 'full_rpkm': 1.33365, 'exp_rpkm': 1.33, 'var': 0.1519256, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862951}, 'lung 104 weeks': {'id': '102547700_Lung_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'lung 104 weeks', 'supp_source': ['104 weeks', 'lung'], 'full_rpkm': 1.92256, 'exp_rpkm': 1.92, 'var': 0.4715464, 'project_desc': 'PRJNA238328', '_version_': 1785745488621862952}, 'muscle 2 weeks': {'id': '102547700_Muscle_002_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'muscle 2 weeks', 'supp_source': ['2 weeks', 'muscle'], 'full_rpkm': 1.86487, 'exp_rpkm': 1.86, 'var': 0.04997, 'project_desc': 'PRJNA238328', '_version_': 1785745488622911488}, 'muscle 6 weeks': {'id': '102547700_Muscle_006_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'muscle 6 weeks', 'supp_source': ['6 weeks', 'muscle'], 'full_rpkm': 1.35821, 'exp_rpkm': 1.36, 'var': 0.03030888, 'project_desc': 'PRJNA238328', '_version_': 1785745488622911489}, 'muscle 21 weeks': {'id': '102547700_Muscle_021_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'muscle 21 weeks', 'supp_source': ['21 weeks', 'muscle'], 'full_rpkm': 1.61239, 'exp_rpkm': 1.61, 'var': 0.0640212, 'project_desc': 'PRJNA238328', '_version_': 1785745488622911490}, 'muscle 104 weeks': {'id': '102547700_Muscle_104_weeks_PRJNA238328', 'gene': 102547700, 'source_name': 'muscle 104 weeks', 'supp_source': ['104 weeks', 'muscle'], 'full_rpkm': 1.14837, 'exp_rpkm': 1.15, 'var': 0.154468, 'project_desc': 'PRJNA238328', '_version_': 1785745488622911491}, 'spleen 2 weeks': {'id': 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1785744894405378048, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 104 weeks", "exp_Mcount": 4084.64}, {"id": "metadata_10116_SAMN02642726", "gene": 102547700, "sample_id": "SAMN02642726", "full_rpkm": 1.58357, "exp_rpkm": 1.58, "exp_total": 4529, "project_desc": "PRJNA238328", "_version_": 1785744894409572352, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 104 weeks", "exp_Mcount": 4339.9}, {"id": "metadata_10116_SAMN02642735", "gene": 102547700, "sample_id": "SAMN02642735", "full_rpkm": 2.48506, "exp_rpkm": 2.49, "exp_total": 5533, "project_desc": "PRJNA238328", "_version_": 1785744894409572353, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 104 weeks", "exp_Mcount": 3378.61}, {"id": "metadata_10116_SAMN02642741", "gene": 102547700, "sample_id": "SAMN02642741", "full_rpkm": 1.75701, "exp_rpkm": 1.76, "exp_total": 4192, "project_desc": "PRJNA238328", "_version_": 1785744894409572354, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 104 weeks", "exp_Mcount": 3620.45}], "uterus 2 weeks": [{"id": "metadata_10116_SAMN02642731", "gene": 102547700, "sample_id": "SAMN02642731", "full_rpkm": 2.64605, "exp_rpkm": 2.65, "exp_total": 5736, "project_desc": "PRJNA238328", "_version_": 1785744894410620934, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 2 weeks", "exp_Mcount": 3289.46}, {"id": "metadata_10116_SAMN02642720", "gene": 102547700, "sample_id": "SAMN02642720", "full_rpkm": 2.21911, "exp_rpkm": 2.22, "exp_total": 3330, "project_desc": "PRJNA238328", "_version_": 1785744894410620935, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 2 weeks", "exp_Mcount": 2277.09}, {"id": "metadata_10116_SAMN02642725", "gene": 102547700, "sample_id": "SAMN02642725", "full_rpkm": 1.75304, "exp_rpkm": 1.75, "exp_total": 2964, "project_desc": "PRJNA238328", "_version_": 1785744894410620936, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 2 weeks", "exp_Mcount": 2565.68}, {"id": "metadata_10116_SAMN02642729", "gene": 102547700, "sample_id": "SAMN02642729", "full_rpkm": 2.04135, "exp_rpkm": 2.04, "exp_total": 4102, "project_desc": "PRJNA238328", "_version_": 1785744894411669504, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 2 weeks", "exp_Mcount": 3049.25}], "uterus 21 weeks": [{"id": "metadata_10116_SAMN02642723", "gene": 102547700, "sample_id": "SAMN02642723", "full_rpkm": 3.22231, "exp_rpkm": 3.22, "exp_total": 8398, "project_desc": "PRJNA238328", "_version_": 1785744894409572355, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 21 weeks", "exp_Mcount": 3954.79}, {"id": "metadata_10116_SAMN02642733", "gene": 102547700, "sample_id": "SAMN02642733", "full_rpkm": 1.07056, "exp_rpkm": 1.07, "exp_total": 3551, "project_desc": "PRJNA238328", "_version_": 1785744894409572356, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 21 weeks", "exp_Mcount": 5033.33}, {"id": "metadata_10116_SAMN02642739", "gene": 102547700, "sample_id": "SAMN02642739", "full_rpkm": 0.828176, "exp_rpkm": 0.828, "exp_total": 2520, "project_desc": "PRJNA238328", "_version_": 1785744894410620928, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 21 weeks", "exp_Mcount": 4617.35}, {"id": "metadata_10116_SAMN02642722", "gene": 102547700, "sample_id": "SAMN02642722", "full_rpkm": 3.63759, "exp_rpkm": 3.64, "exp_total": 5534, "project_desc": "PRJNA238328", "_version_": 1785744894410620929, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 21 weeks", "exp_Mcount": 2308.55}], "uterus 6 weeks": [{"id": "metadata_10116_SAMN02642730", "gene": 102547700, "sample_id": "SAMN02642730", "full_rpkm": 1.26346, "exp_rpkm": 1.26, "exp_total": 2525, "project_desc": "PRJNA238328", "_version_": 1785744894410620930, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 6 weeks", "exp_Mcount": 3032.6}, {"id": "metadata_10116_SAMN02642736", "gene": 102547700, "sample_id": "SAMN02642736", "full_rpkm": 0.937029, "exp_rpkm": 0.937, "exp_total": 2515, "project_desc": "PRJNA238328", "_version_": 1785744894410620931, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 6 weeks", "exp_Mcount": 4072.86}, {"id": "metadata_10116_SAMN02642721", "gene": 102547700, "sample_id": "SAMN02642721", "full_rpkm": 0.992834, "exp_rpkm": 0.993, "exp_total": 2352, "project_desc": "PRJNA238328", "_version_": 1785744894410620932, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 6 weeks", "exp_Mcount": 3594.8}, {"id": "metadata_10116_SAMN02642728", "gene": 102547700, "sample_id": "SAMN02642728", "full_rpkm": 1.18669, "exp_rpkm": 1.19, "exp_total": 2459, "project_desc": "PRJNA238328", "_version_": 1785744894410620933, "is_metadata": true, "is_sample": true, "taxid": 10116, "source_name": "uterus 6 weeks", "exp_Mcount": 3144.39}]}
|
||
window.taxId = 10116
|
||
</script>
|
||
|
||
|
||
<div>
|
||
|
||
|
||
|
||
<select name="p" id="project-selector">
|
||
|
||
|
||
<option value="SRP037986" selected="selected" data-bioproject="PRJNA238328">
|
||
|
||
A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
|
||
|
||
</option>
|
||
|
||
|
||
|
||
</select>
|
||
|
||
|
||
|
||
<ul id="project-summary">
|
||
<li id="project-summary-title">Project title:
|
||
|
||
A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
|
||
|
||
</li>
|
||
|
||
|
||
<li id="project-summary-desc">Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)</li>
|
||
|
||
|
||
|
||
<li id="project-summary-bioprojects">BioProject: <a href="/bioproject/PRJNA238328/">PRJNA238328</a>
|
||
</li>
|
||
|
||
<li id="project-summary-pubs">Publication:
|
||
|
||
|
||
<span><a href="/pubmed/24510058/">PMID 24510058</a></span>
|
||
|
||
</li>
|
||
|
||
|
||
<li id="project-summary-analysis-date">Analysis date: Mon Jun 6 17:44:12 2016</li>
|
||
|
||
</ul>
|
||
|
||
|
||
|
||
<div id="gene-expr-details" class="expression-chart"></div>
|
||
|
||
</div>
|
||
</div>
|
||
</div>
|
||
<script type="text/javascript" src="https://www.gstatic.com/charts/loader.js"></script>
|
||
<script type="text/javascript">
|
||
google.charts.load('current', {
|
||
'packages':[ 'corechart']
|
||
});
|
||
|
||
</script>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-bibliography">
|
||
<section class="rprt-section-header" id="bibliography"><h2 id="header-bibliography"><a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-bibliography .rprt-section-body'"><span class="ui-ncbitoggler-master-text">Bibliography</span></a></h2><div class="rprt-section-tools"><a href="#top" title="Go to the top of the page" class="gene-top-page"><span>Go to the top of the page</span></a><a href="/books/NBK3841/#EntrezGene.Bibliography" title="Help" class="gene-section-help"><span>Help</span></a></div></section>
|
||
<div class="rprt-section-body" style="">
|
||
|
||
<div class="generif-pubmed generif">
|
||
<h3 id="generifsgenereferencesintofunctions">
|
||
<a href="#" class="jig-ncbitoggler-open">GeneRIFs: Gene References Into Functions</a>
|
||
</h3>
|
||
<div>
|
||
<a href="/gene/about-generif" class="whatisthis">What's a GeneRIF?</a>
|
||
<div class="submit-genrif">
|
||
<span>Submit:</span>
|
||
<a href="/gene/submit-generif/?geneId=102547700&sym=LOC102547700&name=uncharacterized LOC102547700&org=Rattus norvegicus">New GeneRIF</a>
|
||
<a href="/RefSeq/update.cgi?geneid=102547700&symbol=LOC102547700;task=fixpub">Correction</a>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
</div>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<div class="rprt-section gene-reference-sequences">
|
||
<section class="rprt-section-header" id="reference-sequences">
|
||
<h2 id="header-reference-sequences">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-reference-sequences .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">NCBI Reference Sequences (RefSeq)</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.NCBI_Reference_Sequences_RefS" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<p>
|
||
<span class="new-icon">NEW</span>
|
||
<strong>Try the new <a href="/datasets/tables/genes/?table_type=transcripts&ids=102547700&utm_source=gene&utm_medium=referral&utm_campaign=refseq" title="View selected attributes for an input list of genes and download datasets containing genomic, transcript and protein sequences along with a detailed data report." data-ga-category="refseq" data-ga-action="click_datasets_link" data-ga-label="transcript_table">Transcript table</a></strong>
|
||
</p>
|
||
<h3 class="genomerefseqs gene_std_toggler" id="annotatedrefseq-title">
|
||
<a class="jig-ncbitoggler-open">RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02</a>
|
||
</h3>
|
||
<div class="genomerefseqs_slave">
|
||
<p class="desc"> The following sections contain reference sequences that belong to a
|
||
specific genome build. <a href="#" id="expl-genomes">Explain</a></p>
|
||
<p id="expl-genomes-desc" style="display:none">This section includes genomic Reference
|
||
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
|
||
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
|
||
assemblies. Model RNAs and proteins are also reported here.</p>
|
||
<h3 id="refseq-sequencedescription-p113242320">Reference GRCr8</h3>
|
||
<h4 id="genomic-p113242320">Genomic </h4>
|
||
<ol>
|
||
<li>
|
||
<p>NC_086032.1 Reference GRCr8</p>
|
||
<dl>
|
||
<dt>Range</dt>
|
||
<dd class="rs-range">
|
||
<span>85619711..85622785 complement</span>
|
||
</dd>
|
||
<dt>Download</dt>
|
||
<dd><a href="/nuccore/NC_086032.1?from=85619711&to=85622785&report=genbank&strand=true" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=NC_086032.1?from=85619711&to=85622785&report=genbank&strand=true">GenBank</a>, <a href="/nuccore/NC_086032.1?from=85619711&to=85622785&report=fasta&strand=true" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=NC_086032.1?from=85619711&to=85622785&report=fasta&strand=true">FASTA</a>, <a href="/nuccore/NC_086032.1?from=85619249&to=85623245&report=graph&content=5&strand=true" ref="ordinalpos=1&ncbi_uid=102547700&link_uid=NC_086032.1?from=85619249&to=85623245&report=graph&content=5&strand=true">Sequence Viewer (Graphics)</a></dd>
|
||
</dl>
|
||
</li>
|
||
</ol>
|
||
<h4 id="rna-p123913488">RNA</h4>
|
||
<ol>
|
||
<li>
|
||
<p><a href="/nuccore/XR_595898.4">XR_595898.4</a> RNA Sequence </p>
|
||
<dl></dl>
|
||
</li>
|
||
<li>
|
||
<p><a href="/nuccore/XR_005493400.2">XR_005493400.2</a> RNA Sequence </p>
|
||
<dl></dl>
|
||
</li>
|
||
</ol>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-related-sequences">
|
||
<section class="rprt-section-header" id="related-sequences">
|
||
<h2 id="header-related-sequences">
|
||
<a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-related-sequences .rprt-section-body'">
|
||
<span class="ui-ncbitoggler-master-text">Related sequences</span>
|
||
</a>
|
||
</h2>
|
||
<div class="rprt-section-tools">
|
||
<a href="#top" title="Go to the top of the page" class="gene-top-page">
|
||
<span>Go to the top of the page</span>
|
||
</a>
|
||
<a href="/books/NBK3841/#EntrezGene.Related_Sequences" title="Help" class="gene-section-help">
|
||
<span>Help</span>
|
||
</a>
|
||
</div>
|
||
</section>
|
||
<div class="rprt-section-body">
|
||
<div>
|
||
<table id="proteinTblId" class="jig-ncbiservergrid" data-jigconfig="webservice:'/gene/102547700/data/related-sequences/',webserviceParams: 'p$l=Ajax', isServersideLoad:true, isServersidePaging: true,isServersidePagingCached: true,pageSize:25">
|
||
<thead>
|
||
<tr>
|
||
<th colspan="2" id="rs-nucleo">Nucleotide</th>
|
||
<th rowspan="2" id="rs-protein">Protein</th>
|
||
<th class="nucleoTblTh" rowspan="2" id="rs-strain">Strain</th>
|
||
</tr>
|
||
<tr>
|
||
<th id="rs-heading">Heading</th>
|
||
<th id="rs-heading-acc">Accession and Version</th>
|
||
</tr>
|
||
</thead>
|
||
<tbody></tbody>
|
||
</table>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
|
||
<div class="rprt-section gene-additional-links">
|
||
|
||
<section class="rprt-section-header" id="additional-links"><h2 id="header-additional-links"><a href="#" class="jig-ncbitoggler-open" data-jigconfig="targets: '.gene-additional-links .rprt-section-body'"><span class="ui-ncbitoggler-master-text">Additional links</span></a></h2><div class="rprt-section-tools"><a href="#top" title="Go to the top of the page" class="gene-top-page"><span>Go to the top of the page</span></a><a href="/books/NBK3841/#EntrezGene.Additional_Links" title="Help" class="gene-section-help"><span>Help</span></a></div></section>
|
||
|
||
<div class="rprt-section-body" style="">
|
||
|
||
|
||
<h3 class="withnote" id="genelinkout">
|
||
<a class="jig-ncbitoggler">Gene LinkOut</a>
|
||
</h3><div>
|
||
<p>The following <a href="https://www.ncbi.nlm.nih.gov/projects/linkout/index.html">LinkOut</a> resources are supplied by external providers. These providers are responsible for maintaining the links. </p>
|
||
<div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Molecular Biology Databases</span>
|
||
</a>
|
||
<ul>
|
||
<li>Ingenuity Pathways Analysis</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://partnersolution.ingenuity.com/?cid=97ae3f91eab87a&p1=Entrez&p2=GV&s=&ipaUri=%2Fpa%2Fapi%2Fv2%2Fgeneview%3Fapplicationname%3DEntrez%26geneId%3D102547700%26geneidtype%3Dentrezgene" ref="itool=Gene_FullReport&uid=102547700&nlmid=&db=gene&log$=linkoutlink&PrId=5628">
|
||
<span>Ingenuity Pathways Analysis</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
<div class="linkout">
|
||
<a class="jig-ncbitoggler-open main">
|
||
<span>Research Materials</span>
|
||
</a>
|
||
<ul>
|
||
<li><span class="order-rsc"></span>GenScript latest version of gene cDNA ORF Clone</li>
|
||
<ul>
|
||
<li>
|
||
<a target="_blank" href="http://www.genscript.com/gene/102547700" ref="itool=Gene_FullReport&uid=102547700&nlmid=&db=gene&log$=linkoutlink&PrId=8012">
|
||
<span>GenScript latest version of gene cDNA ORF Clone</span>
|
||
</a>
|
||
</li>
|
||
</ul>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div id="urls-in-genombrowser" style="display:none">
|
||
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
<div><input type="hidden" class="section_status_input" name="status_checked" id="status_checked" value="" /><input type="hidden" class="section_status_input" name="status_open" id="status_open" value="summary,region,context,bibliography,phenotypes,variation,hiv,interactions,pathways,geneInfo,proteinInfo,refSeq,related,links" /><input type="hidden" class="section_status_input" name="status_exist" id="status_exist" value="summary,context,region,expression,bibliography,refSeq,related,links" /><input type="hidden" class="section_status_input" name="status_closed" id="status_closed" value="" /><meta name="status_checked" content="" class="meta_section_status" /><meta name="status_open" content="summary,region,context,bibliography,phenotypes,variation,hiv,interactions,pathways,geneInfo,proteinInfo,refSeq,related,links" class="meta_section_status" /><meta name="status_exist" content="summary,context,region,expression,bibliography,refSeq,related,links" class="meta_section_status" /><meta name="status_closed" content="" class="meta_section_status" /><script type="text/javascript">
|
||
|
||
var section_status_meta = {
|
||
'status_checked': '',
|
||
'status_open': 'summary,region,context,bibliography,phenotypes,variation,hiv,interactions,pathways,geneInfo,proteinInfo,refSeq,related,links',
|
||
'status_exist': 'summary,context,region,expression,bibliography,refSeq,related,links',
|
||
'status_closed': ''
|
||
};
|
||
|
||
|
||
/*
|
||
for (var o in section_status_meta) {
|
||
var meta=document.createElement('meta');
|
||
meta.name = o;
|
||
meta.content = section_status_meta[o];
|
||
var attr = document.createAttribute('data-ignore-limit');
|
||
attr.value = 'true';
|
||
meta.setAttributeNode(attr);
|
||
document.getElementsByTagName('head')[0].appendChild(meta);
|
||
}
|
||
*/
|
||
|
||
|
||
var __ncbi_sg_pingCallbacks_render_gene = function (data, evtObj, type) {
|
||
// data looks like {jsevent: "click", "link_id": "foo", ...}
|
||
// evtObj is the JS event object
|
||
// type is either "stat" (for applog) or "ga"
|
||
var extraData = {};
|
||
if (type == "stat") {
|
||
for (var o in section_status_meta) {
|
||
extraData[o] = section_status_meta[o];
|
||
}
|
||
|
||
return extraData;
|
||
|
||
}
|
||
}
|
||
|
||
|
||
</script></div>
|
||
|
||
</div>
|
||
</div>
|
||
|
||
<div id="messagearea_bottom">
|
||
|
||
</div>
|
||
<div class=" bottom">
|
||
|
||
</div>
|
||
|
||
</div>
|
||
</div>
|
||
<div class="supplemental col three_col last" id="sidebar_tabular">
|
||
<!-- sidebar close/hide button-->
|
||
<div class="ui-helper-clearfix">
|
||
<a href="#" id="sidecontent_2_pullout" style="float:right;" class="sidecontentpullout_local collapse_button"><span>Hide sidebar >></span></a>
|
||
</div>
|
||
<!-- end sidebar close/hide button-->
|
||
|
||
<h2 class="offscreen_noflow">Supplemental Content</h2>
|
||
|
||
<div id="gene-sidebar">
|
||
<div>
|
||
<div class="portlet brieflink dis-table-of-contents">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Table of contents</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_TableOfContents.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_TableOfContents" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_TableOfContents.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li class="">
|
||
<a href="#summary">Summary</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#genomic-context">Genomic context</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#genomic-regions-transcripts-products">Genomic regions, transcripts, and products</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#gene-expression">Expression</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#bibliography">Bibliography</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#reference-sequences">NCBI Reference Sequences (RefSeq)</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#related-sequences">Related sequences</a>
|
||
</li>
|
||
<li class="">
|
||
<a href="#additional-links">Additional links</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-genomesbrowser brieflink dis-genomesbrowser">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Genome Browsers</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GenomeBrowsers.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_GenomeBrowsers" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GenomeBrowsers.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="#">Loading...</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet dis-related-info brieflink">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Related information</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedInformation.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="discovery_db_links" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedInformation.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content DiscoveryDbLinks">
|
||
<ul>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/bioproject?LinkName=gene_bioproject&from_uid=102547700" ref="log$=recordlinks">BioProjects</a>
|
||
<div class="brieflinkpop offscreen_noflow">BioProjects related to a gene</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/gene?LinkName=gene_gene_neighbors&from_uid=102547700" ref="log$=recordlinks">Gene neighbors</a>
|
||
<div class="brieflinkpop offscreen_noflow">Overlapping genes and two nearest non-overlapping genes on either side</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/genome?LinkName=gene_genome&from_uid=102547700" ref="log$=recordlinks">Genome</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related Genome</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/geoprofiles?LinkName=gene_geoprofiles&from_uid=102547700" ref="log$=recordlinks">GEO Profiles</a>
|
||
<div class="brieflinkpop offscreen_noflow">Related GEO</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/nuccore?LinkName=gene_nuccore&from_uid=102547700" ref="log$=recordlinks">Nucleotide</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related Nucleotide entry</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/nuccore?LinkName=gene_nuccore_refseqrna&from_uid=102547700" ref="log$=recordlinks">RefSeq RNAs</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to Nucleotide RefSeq RNAs</div>
|
||
</li>
|
||
<li class="brieflinkpopper">
|
||
<a class="brieflinkpopperctrl" href="/taxonomy?LinkName=gene_taxonomy&from_uid=102547700" ref="log$=recordlinks">Taxonomy</a>
|
||
<div class="brieflinkpop offscreen_noflow">Link to related taxonomy entry</div>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet dis-links-to-other-res brieflink">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Links to other resources</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_LinksTwo.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_LinksTwo" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_LinksTwo.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://rgd.mcw.edu/rgdweb/search/search.html?term=7606883">RGD</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.alliancegenome.org/gene/RGD:7606883">AllianceGenome</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-general-info">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>General information</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GeneralInfo.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_GeneralInfo" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_GeneralInfo.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="/pmc/?term=PMC4383897+OR+PMC3013746+OR+PMC1761442+OR+PMC539985">About Gene</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK3840">FAQ</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://ftp.ncbi.nlm.nih.gov/gene/">FTP site</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK3841/">Help</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK3842/">My NCBI help</a>
|
||
</li>
|
||
<li>
|
||
<a href="/books/NBK21085/">NCBI Handbook</a>
|
||
</li>
|
||
<li>
|
||
<a href="/gene/statistics/">Statistics</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-related-sites">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Related sites</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedSites.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_RelatedSites" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_RelatedSites.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/BLAST">BLAST</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/genome">Genome</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/bioproject">BioProject</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/genome/gdv/">Genome Data Viewer</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/geo">GEO</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/omim">OMIM</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/probe">Probe</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/RefSeq">RefSeq</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-feedback">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Feedback</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Feedback.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_Feedback" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Feedback.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://support.ncbi.nlm.nih.gov/ics/support/ticketnewwizard.asp?style=classic&deptID=28049">Contact Help Desk</a>
|
||
</li>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/RefSeq/update.cgi?geneid=102547700&symbol=LOC102547700">Submit Correction</a>
|
||
</li>
|
||
<li>
|
||
<a href="/gene/submit-generif?geneId=102547700&sym=LOC102547700&name=uncharacterized LOC102547700&org=Rattus norvegicus">Submit GeneRIF</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
<div class="portlet brieflink dis-subscription">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Subscription</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Subscription.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="Gene_Subscription" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.Gene_RVFullReport.Gene_RightColumn.Gene_Subscription.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<ul>
|
||
<li>
|
||
<a href="https://www.ncbi.nlm.nih.gov/mailman/listinfo/refseq-announce">RefSeq</a>
|
||
</li>
|
||
</ul>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
|
||
<!-- <component id="Gene_RVFullReport.Gene_RightColMenuLinks"/>-->
|
||
<div class="portlet">
|
||
<div class="portlet_head">
|
||
<div class="portlet_title">
|
||
<h3>Recent activity</h3>
|
||
</div>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.Shutter" sid="1" href="#" class="portlet_shutter" title="Show/hide content" remembercollapsed="true" pgsec_name="recent_activity" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.Shutter"></a>
|
||
</div>
|
||
<div class="portlet_content">
|
||
<div id="HTDisplay" class="">
|
||
<input name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.Cmd" sid="1" type="hidden" />
|
||
<div class="action">
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.ClearHistory" sid="1" realname="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.ClearHistory" cmd="ClearHT" href="?cmd=ClearHT&" onclick="return false;" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.ClearHistory">
|
||
Clear
|
||
</a>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryToggle" sid="1" realname="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryToggle" class="HTOn" cmd="HTOff" href="?cmd=HTOff&" onclick="return false;" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryToggle">
|
||
Turn Off
|
||
</a>
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryToggle" sid="2" realname="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryToggle" class="HTOff" cmd="HTOn" href="?cmd=HTOn&" onclick="return false;" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryToggle">
|
||
Turn On
|
||
</a>
|
||
</div>
|
||
<ul id="activity">
|
||
<li class="ra_rcd ralinkpopper two_line">
|
||
<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=1" href="/portal/utils/pageresolver.fcgi?recordid=67d2953284f3725e5992dc4d">LOC102547700 uncharacterized LOC102547700 [Rattus norvegicus]</a>
|
||
<div class="ralinkpop offscreen_noflow">LOC102547700 uncharacterized LOC102547700 [Rattus norvegicus]<div class="brieflinkpopdesc">Gene ID:102547700</div></div>
|
||
<div class="tertiary">Gene</div>
|
||
</li>
|
||
<li class="ra_rcd ralinkpopper two_line">
|
||
<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=2" href="/portal/utils/pageresolver.fcgi?recordid=67d2952db15b832ebc75c418">Rat fos-related antigen (Fra-1) mRNA, complete cds</a>
|
||
<div class="ralinkpop offscreen_noflow">Rat fos-related antigen (Fra-1) mRNA, complete cds<div class="brieflinkpopdesc">gi|204174|gb|M19651.1|RATFRA1</div></div>
|
||
<div class="tertiary">Nucleotide</div>
|
||
</li>
|
||
<li class="ra_rcd ralinkpopper two_line">
|
||
<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=3" href="/portal/utils/pageresolver.fcgi?recordid=67d2952ab15b832ebc75ae0b">Fosl1 FOS like 1, AP-1 transcription factor subunit [Rattus norvegicus]</a>
|
||
<div class="ralinkpop offscreen_noflow">Fosl1 FOS like 1, AP-1 transcription factor subunit [Rattus norvegicus]<div class="brieflinkpopdesc">Gene ID:25445</div></div>
|
||
<div class="tertiary">Gene</div>
|
||
</li>
|
||
<li class="ra_rcd ralinkpopper two_line">
|
||
<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=4" href="/portal/utils/pageresolver.fcgi?recordid=67d29526b15b832ebc759161">Rattus norvegicus MAP-kinase phosphatase (cpg21) mRNA, complete cds</a>
|
||
<div class="ralinkpop offscreen_noflow">Rattus norvegicus MAP-kinase phosphatase (cpg21) mRNA, complete cds<div class="brieflinkpopdesc">gi|2746069|gb|AF013144.1|</div></div>
|
||
<div class="tertiary">Nucleotide</div>
|
||
</li>
|
||
<li class="ra_rcd ralinkpopper two_line">
|
||
<a class="htb ralinkpopperctrl" ref="log$=activity&linkpos=5" href="/portal/utils/pageresolver.fcgi?recordid=67d29524f4a390645e91f8f4">Dusp5 dual specificity phosphatase 5 [Rattus norvegicus]</a>
|
||
<div class="ralinkpop offscreen_noflow">Dusp5 dual specificity phosphatase 5 [Rattus norvegicus]<div class="brieflinkpopdesc">Gene ID:171109</div></div>
|
||
<div class="tertiary">Gene</div>
|
||
</li>
|
||
</ul>
|
||
<p class="HTOn">Your browsing activity is empty.</p>
|
||
<p class="HTOff">Activity recording is turned off.</p>
|
||
<p id="turnOn" class="HTOff">
|
||
<a name="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryOn" sid="1" realname="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryOn" cmd="HTOn" href="?cmd=HTOn&" onclick="return false;" id="EntrezSystem2.PEntrez.Gene.Gene_ResultsPanel.HistoryDisplay.HistoryOn">Turn recording back on</a>
|
||
</p>
|
||
<a class="seemore" href="/sites/myncbi/recentactivity">See more...</a>
|
||
</div>
|
||
</div>
|
||
</div>
|
||
|
||
</div>
|
||
</div>
|
||
|
||
<div id="NCBIFooter_dynamic">
|
||
<!--<component id="NCBIBreadcrumbs"/>
|
||
<component id="NCBIHelpDesk"/>-->
|
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